HEADER OXIDOREDUCTASE 15-APR-21 7O9C TITLE DINI-SULERYTHRIN TREATED BY HYDROGEN PERXOIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULERYTHRIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFURISPHAERA TOKODAII (STRAIN DSM 16993 / JCM SOURCE 3 10545 / NBRC 100140 / 7); SOURCE 4 ORGANISM_COMMON: SULFOLOBUS TOKODAII; SOURCE 5 ORGANISM_TAXID: 273063; SOURCE 6 STRAIN: DSM 16993 / JCM 10545 / NBRC 100140 / 7; SOURCE 7 GENE: ST2370, STK_23700; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 37762 KEYWDS SULERYTHRIN, HYDROGEN PEROXIDE, MOLECULAR OXYGEN, BI-METALLIC BINDING KEYWDS 2 SITE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.-H.JEOUNG,H.DOBBEK REVDAT 3 31-JAN-24 7O9C 1 REMARK REVDAT 2 15-DEC-21 7O9C 1 JRNL REVDAT 1 01-DEC-21 7O9C 0 JRNL AUTH J.H.JEOUNG,S.RUNGER,M.HAUMANN,B.NEUMANN,F.KLEMKE,V.DAVIS, JRNL AUTH 2 A.FISCHER,H.DAU,U.WOLLENBERGER,H.DOBBEK JRNL TITL BIMETALLIC MN, FE, CO, AND NI SITES IN A FOUR-HELIX BUNDLE JRNL TITL 2 PROTEIN: METAL BINDING, STRUCTURE, AND PEROXIDE ACTIVATION. JRNL REF INORG.CHEM. V. 60 17498 2021 JRNL REFN ISSN 0020-1669 JRNL PMID 34757735 JRNL DOI 10.1021/ACS.INORGCHEM.1C01919 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.1_4122: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 39526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1976 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3000 - 3.8500 1.00 2726 144 0.1398 0.1404 REMARK 3 2 3.8400 - 3.0500 1.00 2713 142 0.1416 0.1981 REMARK 3 3 3.0500 - 2.6700 1.00 2720 143 0.1445 0.1692 REMARK 3 4 2.6700 - 2.4200 1.00 2673 141 0.1433 0.1917 REMARK 3 5 2.4200 - 2.2500 1.00 2707 143 0.1491 0.1953 REMARK 3 6 2.2500 - 2.1200 1.00 2708 142 0.1383 0.1653 REMARK 3 7 2.1200 - 2.0100 1.00 2667 141 0.1438 0.1862 REMARK 3 8 2.0100 - 1.9200 1.00 2695 141 0.1627 0.2135 REMARK 3 9 1.9200 - 1.8500 1.00 2710 143 0.1623 0.2205 REMARK 3 10 1.8500 - 1.7900 1.00 2652 140 0.1546 0.1910 REMARK 3 11 1.7900 - 1.7300 1.00 2694 141 0.1594 0.1894 REMARK 3 12 1.7300 - 1.6800 1.00 2690 142 0.1638 0.1976 REMARK 3 13 1.6800 - 1.6400 1.00 2683 141 0.1884 0.2336 REMARK 3 14 1.6400 - 1.6000 0.94 2512 132 0.2080 0.2447 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2358 REMARK 3 ANGLE : 1.026 3178 REMARK 3 CHIRALITY : 0.049 323 REMARK 3 PLANARITY : 0.010 423 REMARK 3 DIHEDRAL : 4.260 326 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.166 -26.618 -29.340 REMARK 3 T TENSOR REMARK 3 T11: 0.1889 T22: 0.2022 REMARK 3 T33: 0.1544 T12: -0.0010 REMARK 3 T13: 0.0457 T23: -0.0322 REMARK 3 L TENSOR REMARK 3 L11: 1.4714 L22: 1.8913 REMARK 3 L33: 1.1026 L12: -0.5081 REMARK 3 L13: 0.0890 L23: -0.6546 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: 0.1546 S13: -0.0829 REMARK 3 S21: -0.1449 S22: -0.0368 S23: -0.1707 REMARK 3 S31: 0.0383 S32: 0.0616 S33: 0.0197 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 67:97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.407 -30.881 -10.724 REMARK 3 T TENSOR REMARK 3 T11: 0.1443 T22: 0.1562 REMARK 3 T33: 0.2331 T12: 0.0171 REMARK 3 T13: -0.0174 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 0.9059 L22: 1.3604 REMARK 3 L33: 0.6060 L12: 0.4090 REMARK 3 L13: 0.0004 L23: 0.2325 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: -0.0972 S13: -0.1960 REMARK 3 S21: 0.0297 S22: -0.0526 S23: -0.3062 REMARK 3 S31: 0.0637 S32: 0.0472 S33: 0.0319 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 98:143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.873 -15.385 -9.100 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.1465 REMARK 3 T33: 0.1706 T12: -0.0034 REMARK 3 T13: -0.0269 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.0674 L22: 2.1789 REMARK 3 L33: 1.3200 L12: 1.4071 REMARK 3 L13: -0.5262 L23: -0.5610 REMARK 3 S TENSOR REMARK 3 S11: 0.1455 S12: -0.2050 S13: -0.0009 REMARK 3 S21: 0.1846 S22: -0.1009 S23: -0.1350 REMARK 3 S31: -0.0266 S32: 0.0265 S33: -0.0474 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID -1:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.876 -3.237 -26.156 REMARK 3 T TENSOR REMARK 3 T11: 0.3208 T22: 0.3023 REMARK 3 T33: 0.4308 T12: -0.0558 REMARK 3 T13: -0.0156 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 5.4322 L22: 7.5214 REMARK 3 L33: 6.7541 L12: -2.2575 REMARK 3 L13: 0.9840 L23: -0.2360 REMARK 3 S TENSOR REMARK 3 S11: -0.1999 S12: 0.1997 S13: 0.4078 REMARK 3 S21: -0.3804 S22: -0.2750 S23: 0.4534 REMARK 3 S31: -0.5564 S32: -0.2383 S33: 0.2698 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 8:66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.634 -22.099 -18.184 REMARK 3 T TENSOR REMARK 3 T11: 0.1463 T22: 0.1518 REMARK 3 T33: 0.1343 T12: 0.0076 REMARK 3 T13: 0.0051 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.5915 L22: 1.7166 REMARK 3 L33: 0.6650 L12: 1.0221 REMARK 3 L13: -0.6759 L23: -0.3496 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0475 S13: -0.0863 REMARK 3 S21: -0.0609 S22: 0.0133 S23: -0.1952 REMARK 3 S31: -0.0297 S32: -0.0037 S33: -0.0061 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 67:97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.277 -17.992 -37.678 REMARK 3 T TENSOR REMARK 3 T11: 0.2566 T22: 0.2755 REMARK 3 T33: 0.2034 T12: -0.0247 REMARK 3 T13: 0.1023 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.6136 L22: 1.6745 REMARK 3 L33: 0.8801 L12: 0.1193 REMARK 3 L13: 0.4460 L23: 0.8453 REMARK 3 S TENSOR REMARK 3 S11: -0.0609 S12: 0.3792 S13: -0.0251 REMARK 3 S21: -0.2821 S22: 0.1110 S23: -0.2460 REMARK 3 S31: -0.0843 S32: 0.0335 S33: -0.0257 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 98:143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.957 -33.021 -39.223 REMARK 3 T TENSOR REMARK 3 T11: 0.3147 T22: 0.3376 REMARK 3 T33: 0.2331 T12: -0.0069 REMARK 3 T13: 0.1099 T23: -0.0966 REMARK 3 L TENSOR REMARK 3 L11: 2.5983 L22: 3.0822 REMARK 3 L33: 1.4441 L12: -1.3547 REMARK 3 L13: 0.7136 L23: -0.5114 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: 0.5463 S13: -0.3740 REMARK 3 S21: -0.3531 S22: -0.0792 S23: 0.0116 REMARK 3 S31: 0.1633 S32: 0.1585 S33: 0.0739 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7O9C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-APR-21. REMARK 100 THE DEPOSITION ID IS D_1292115332. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 39.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 9.890 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1J30 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS (PH 5.5) AND 20-25% REMARK 280 (W/V) PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.59950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.59950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.59950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -134.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 486 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 487 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 144 REMARK 465 THR B 144 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER B 48 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS B 0 O HOH B 302 1.26 REMARK 500 HH22 ARG A 108 O HOH A 301 1.36 REMARK 500 HD22 ASN B 135 O HOH B 305 1.43 REMARK 500 NI NI B 202 O HOH B 302 1.59 REMARK 500 O HOH A 356 O HOH A 450 1.81 REMARK 500 OE1 GLU B 36 O HOH B 301 1.92 REMARK 500 O HOH B 350 O HOH B 389 1.94 REMARK 500 ND1 HIS B 0 O HOH B 302 1.96 REMARK 500 NH2 ARG A 108 O HOH A 301 1.98 REMARK 500 O HOH A 436 O HOH A 456 1.98 REMARK 500 O HOH A 333 O HOH A 482 1.98 REMARK 500 O HOH A 370 O HOH B 411 1.99 REMARK 500 OE1 GLU A 36 O HOH A 302 2.01 REMARK 500 O HOH B 320 O HOH B 433 2.01 REMARK 500 O HOH B 303 O HOH B 310 2.02 REMARK 500 OE1 GLU A 120 O HOH A 303 2.04 REMARK 500 O HOH B 400 O HOH B 463 2.08 REMARK 500 O HOH A 330 O HOH A 398 2.08 REMARK 500 O HOH A 310 O HOH B 380 2.09 REMARK 500 O HOH A 341 O HOH A 390 2.15 REMARK 500 O HOH A 466 O HOH A 468 2.15 REMARK 500 O HOH B 381 O HOH B 408 2.16 REMARK 500 NH1 ARG B 108 OE2 GLU B 120 2.16 REMARK 500 O HOH A 380 O HOH A 471 2.17 REMARK 500 O HOH A 357 O HOH B 330 2.18 REMARK 500 OD1 ASN B 135 O HOH B 303 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 315 O HOH B 374 2455 1.79 REMARK 500 O HOH A 507 O HOH A 507 2455 2.18 REMARK 500 O HOH B 364 O HOH B 467 3555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 39 69.99 -117.08 REMARK 500 GLN A 98 -57.38 -126.74 REMARK 500 TYR B 39 69.00 -117.58 REMARK 500 GLN B 98 -53.50 -132.32 REMARK 500 PHE B 112 68.37 -116.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 486 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B 487 DISTANCE = 6.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 203 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 20 OE1 REMARK 620 2 GLU A 20 OE2 57.8 REMARK 620 3 GLU A 53 OE1 82.4 140.2 REMARK 620 4 HIS A 56 ND1 99.1 95.6 90.0 REMARK 620 5 GLU B 126 OE2 138.5 82.5 136.2 96.1 REMARK 620 6 HOH B 387 O 82.0 86.9 88.0 177.5 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 203 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 53 OE2 REMARK 620 2 GLU B 92 OE1 155.4 REMARK 620 3 GLU B 92 OE2 96.5 60.4 REMARK 620 4 GLU B 126 OE1 112.4 89.7 150.0 REMARK 620 5 HIS B 129 ND1 93.5 98.1 98.5 87.7 REMARK 620 6 HOH B 312 O 85.8 85.3 88.8 85.9 172.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 92 OE1 REMARK 620 2 GLU A 92 OE2 61.0 REMARK 620 3 GLU A 126 OE1 87.5 148.5 REMARK 620 4 HIS A 129 ND1 99.7 97.8 88.5 REMARK 620 5 HOH A 310 O 82.7 84.7 90.0 177.1 REMARK 620 6 GLU B 53 OE2 155.3 95.7 115.2 91.0 87.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 126 OE2 REMARK 620 2 GLU B 20 OE1 139.9 REMARK 620 3 GLU B 20 OE2 81.6 58.7 REMARK 620 4 GLU B 53 OE1 130.9 87.8 146.1 REMARK 620 5 HIS B 56 ND1 93.0 97.2 97.6 91.0 REMARK 620 6 HOH B 380 O 88.3 83.1 84.6 86.6 177.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 311 O REMARK 620 2 GLY B -1 N 103.5 REMARK 620 3 HIS B 0 N 108.1 87.0 REMARK 620 4 HIS B 0 ND1 123.2 131.8 89.2 REMARK 620 N 1 2 3 DBREF 7O9C A 1 144 UNP F9VPE5 F9VPE5_SULTO 1 144 DBREF 7O9C B 1 144 UNP F9VPE5 F9VPE5_SULTO 1 144 SEQADV 7O9C GLY A -1 UNP F9VPE5 EXPRESSION TAG SEQADV 7O9C HIS A 0 UNP F9VPE5 EXPRESSION TAG SEQADV 7O9C GLY B -1 UNP F9VPE5 EXPRESSION TAG SEQADV 7O9C HIS B 0 UNP F9VPE5 EXPRESSION TAG SEQRES 1 A 146 GLY HIS MET LYS ASP LEU LYS GLY THR LYS THR ALA GLU SEQRES 2 A 146 ASN LEU LYS GLN GLY PHE ILE GLY GLU SER MET ALA ASN SEQRES 3 A 146 ARG ARG TYR LEU TYR PHE ALA LYS ARG ALA ASP GLU GLU SEQRES 4 A 146 GLY TYR PRO GLU ILE ALA GLY LEU LEU ARG SER ILE ALA SEQRES 5 A 146 GLU GLY GLU THR ALA HIS ALA PHE GLY HIS LEU ASP PHE SEQRES 6 A 146 ILE ARG GLN GLY GLY LEU THR ASP PRO ALA THR ASP LYS SEQRES 7 A 146 PRO ILE GLY THR LEU GLU GLN MET ILE GLU SER ALA ILE SEQRES 8 A 146 ALA GLY GLU THR TYR GLU TRP THR GLN MET TYR PRO GLY SEQRES 9 A 146 PHE ALA LYS VAL ALA ARG GLU GLU GLY PHE PRO GLU VAL SEQRES 10 A 146 ALA GLU TRP PHE GLU THR LEU ALA ARG ALA GLU LYS SER SEQRES 11 A 146 HIS ALA GLU LYS PHE GLN ASN VAL LEU LYS GLN LEU LYS SEQRES 12 A 146 GLY GLY THR SEQRES 1 B 146 GLY HIS MET LYS ASP LEU LYS GLY THR LYS THR ALA GLU SEQRES 2 B 146 ASN LEU LYS GLN GLY PHE ILE GLY GLU SER MET ALA ASN SEQRES 3 B 146 ARG ARG TYR LEU TYR PHE ALA LYS ARG ALA ASP GLU GLU SEQRES 4 B 146 GLY TYR PRO GLU ILE ALA GLY LEU LEU ARG SER ILE ALA SEQRES 5 B 146 GLU GLY GLU THR ALA HIS ALA PHE GLY HIS LEU ASP PHE SEQRES 6 B 146 ILE ARG GLN GLY GLY LEU THR ASP PRO ALA THR ASP LYS SEQRES 7 B 146 PRO ILE GLY THR LEU GLU GLN MET ILE GLU SER ALA ILE SEQRES 8 B 146 ALA GLY GLU THR TYR GLU TRP THR GLN MET TYR PRO GLY SEQRES 9 B 146 PHE ALA LYS VAL ALA ARG GLU GLU GLY PHE PRO GLU VAL SEQRES 10 B 146 ALA GLU TRP PHE GLU THR LEU ALA ARG ALA GLU LYS SER SEQRES 11 B 146 HIS ALA GLU LYS PHE GLN ASN VAL LEU LYS GLN LEU LYS SEQRES 12 B 146 GLY GLY THR HET CL A 201 1 HET NI A 202 1 HET NI A 203 1 HET NI B 201 1 HET NI B 202 1 HET NI B 203 1 HET CL B 204 1 HETNAM CL CHLORIDE ION HETNAM NI NICKEL (II) ION FORMUL 3 CL 2(CL 1-) FORMUL 4 NI 5(NI 2+) FORMUL 10 HOH *399(H2 O) HELIX 1 AA1 THR A 7 GLY A 38 1 32 HELIX 2 AA2 TYR A 39 GLY A 67 1 29 HELIX 3 AA3 THR A 80 GLN A 98 1 19 HELIX 4 AA4 GLN A 98 GLU A 110 1 13 HELIX 5 AA5 PHE A 112 GLY A 143 1 32 HELIX 6 AA6 THR B 7 GLY B 38 1 32 HELIX 7 AA7 TYR B 39 GLY B 67 1 29 HELIX 8 AA8 THR B 80 GLN B 98 1 19 HELIX 9 AA9 GLN B 98 GLY B 111 1 14 HELIX 10 AB1 PHE B 112 GLY B 143 1 32 LINK OE1 GLU A 20 NI NI A 203 1555 1555 2.21 LINK OE2 GLU A 20 NI NI A 203 1555 1555 2.23 LINK OE1 GLU A 53 NI NI A 203 1555 1555 2.02 LINK OE2 GLU A 53 NI NI B 203 1555 1555 2.04 LINK ND1 HIS A 56 NI NI A 203 1555 1555 2.16 LINK OE1 GLU A 92 NI NI A 202 1555 1555 2.19 LINK OE2 GLU A 92 NI NI A 202 1555 1555 2.18 LINK OE1 GLU A 126 NI NI A 202 1555 1555 2.04 LINK OE2 GLU A 126 NI NI B 201 1555 1555 2.01 LINK ND1 HIS A 129 NI NI A 202 1555 1555 2.10 LINK NI NI A 202 O HOH A 310 1555 1555 2.16 LINK NI NI A 202 OE2 GLU B 53 1555 1555 2.02 LINK NI NI A 203 OE2 GLU B 126 1555 1555 1.97 LINK NI NI A 203 O HOH B 387 1555 1555 2.28 LINK O HOH A 311 NI NI B 202 1555 1555 2.09 LINK N GLY B -1 NI NI B 202 1555 1555 2.16 LINK N HIS B 0 NI NI B 202 1555 1555 1.79 LINK ND1 HIS B 0 NI NI B 202 1555 1555 2.52 LINK OE1 GLU B 20 NI NI B 201 1555 1555 2.13 LINK OE2 GLU B 20 NI NI B 201 1555 1555 2.27 LINK OE1 GLU B 53 NI NI B 201 1555 1555 1.99 LINK ND1 HIS B 56 NI NI B 201 1555 1555 2.15 LINK OE1 GLU B 92 NI NI B 203 1555 1555 2.16 LINK OE2 GLU B 92 NI NI B 203 1555 1555 2.12 LINK OE1 GLU B 126 NI NI B 203 1555 1555 1.91 LINK ND1 HIS B 129 NI NI B 203 1555 1555 2.07 LINK NI NI B 201 O HOH B 380 1555 1555 2.13 LINK NI NI B 203 O HOH B 312 1555 1555 2.05 CRYST1 72.991 72.991 99.199 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013700 0.007910 0.000000 0.00000 SCALE2 0.000000 0.015820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010081 0.00000