HEADER HYDROLASE 16-APR-21 7O9L TITLE DICTYOSTELIUM DISCOIDEUM DYE DECOLORIZING PEROXIDASE DYPA IN COMPLEX TITLE 2 WITH CYANIDE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYPA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_COMMON: SLIME MOLD; SOURCE 4 ORGANISM_TAXID: 44689; SOURCE 5 GENE: DDB0168077, DDB0217308; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DYE DECOLORIZING-TYPE PEROXIDASE, DICTYOSTELIUM DISCOIDEUM, B-TYPE KEYWDS 2 DYP, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.RAI,R.FEDOROV,D.J.MANSTEIN REVDAT 2 31-JAN-24 7O9L 1 REMARK REVDAT 1 14-JUL-21 7O9L 0 JRNL AUTH A.RAI,J.P.KLARE,P.Y.A.REINKE,F.ENGLMAIER,J.FOHRER,R.FEDOROV, JRNL AUTH 2 M.H.TAFT,I.CHIZHOV,U.CURTH,O.PLETTENBURG,D.J.MANSTEIN JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF A JRNL TITL 2 DYE-DECOLORIZING PEROXIDASE FROM DICTYOSTELIUM DISCOIDEUM . JRNL REF INT J MOL SCI V. 22 2021 JRNL REFN ESSN 1422-0067 JRNL PMID 34200865 JRNL DOI 10.3390/IJMS22126265 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 82292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2200 - 5.6800 1.00 2932 159 0.1876 0.2312 REMARK 3 2 5.6800 - 4.5100 1.00 2795 144 0.1464 0.1365 REMARK 3 3 4.5100 - 3.9400 1.00 2752 157 0.1296 0.1471 REMARK 3 4 3.9400 - 3.5800 1.00 2740 150 0.1335 0.1486 REMARK 3 5 3.5800 - 3.3200 1.00 2723 145 0.1369 0.1477 REMARK 3 6 3.3200 - 3.1300 1.00 2724 135 0.1493 0.1669 REMARK 3 7 3.1300 - 2.9700 1.00 2692 158 0.1548 0.1960 REMARK 3 8 2.9700 - 2.8400 1.00 2696 146 0.1473 0.2006 REMARK 3 9 2.8400 - 2.7300 1.00 2687 139 0.1591 0.1984 REMARK 3 10 2.7300 - 2.6400 1.00 2696 141 0.1525 0.1874 REMARK 3 11 2.6400 - 2.5600 1.00 2681 168 0.1547 0.1960 REMARK 3 12 2.5600 - 2.4800 1.00 2683 139 0.1590 0.1923 REMARK 3 13 2.4800 - 2.4200 1.00 2690 153 0.1540 0.1823 REMARK 3 14 2.4200 - 2.3600 1.00 2642 160 0.1495 0.1894 REMARK 3 15 2.3600 - 2.3000 1.00 2678 115 0.1454 0.1966 REMARK 3 16 2.3000 - 2.2600 1.00 2682 157 0.1496 0.1783 REMARK 3 17 2.2600 - 2.2100 1.00 2661 128 0.1492 0.1874 REMARK 3 18 2.2100 - 2.1700 1.00 2672 141 0.1526 0.1841 REMARK 3 19 2.1700 - 2.1300 1.00 2677 137 0.1443 0.1889 REMARK 3 20 2.1300 - 2.0900 1.00 2681 140 0.1517 0.2108 REMARK 3 21 2.0900 - 2.0600 1.00 2661 139 0.1565 0.1818 REMARK 3 22 2.0600 - 2.0300 1.00 2639 135 0.1613 0.1480 REMARK 3 23 2.0300 - 2.0000 1.00 2677 143 0.1591 0.1903 REMARK 3 24 2.0000 - 1.9700 1.00 2681 130 0.1721 0.2184 REMARK 3 25 1.9700 - 1.9400 1.00 2669 134 0.1820 0.2141 REMARK 3 26 1.9400 - 1.9200 1.00 2648 138 0.2039 0.2268 REMARK 3 27 1.9200 - 1.8900 1.00 2668 132 0.2239 0.2639 REMARK 3 28 1.8900 - 1.8700 1.00 2661 126 0.2398 0.2440 REMARK 3 29 1.8700 - 1.8500 1.00 2681 134 0.2680 0.3017 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5135 REMARK 3 ANGLE : 1.103 6926 REMARK 3 CHIRALITY : 0.077 744 REMARK 3 PLANARITY : 0.005 886 REMARK 3 DIHEDRAL : 12.105 711 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 9.0737 26.3872 13.8895 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.1630 REMARK 3 T33: 0.1560 T12: 0.0001 REMARK 3 T13: 0.0116 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.7310 L22: 0.3995 REMARK 3 L33: 0.3685 L12: 0.0357 REMARK 3 L13: 0.1913 L23: -0.0938 REMARK 3 S TENSOR REMARK 3 S11: 0.0254 S12: -0.0343 S13: 0.0185 REMARK 3 S21: 0.0208 S22: 0.0018 S23: 0.0217 REMARK 3 S31: -0.0324 S32: -0.0062 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7O9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-APR-21. REMARK 100 THE DEPOSITION ID IS D_1292115272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91985 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82374 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 47.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.40 REMARK 200 R MERGE (I) : 0.03940 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 26.22 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7O9J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M SODIUM MALONATE PH 7.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.74000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 70.52500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.87000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.52500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 70.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.61000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.52500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.52500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.87000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 70.52500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.52500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.61000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.74000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 158 O HOH A 1101 2.07 REMARK 500 OD2 ASP A 155 O HOH A 1102 2.09 REMARK 500 O LEU A 165 O HOH A 1103 2.10 REMARK 500 O ARG B 214 O HOH B 1101 2.17 REMARK 500 O HOH B 1109 O HOH B 1213 2.17 REMARK 500 O ARG B 217 O HOH B 1101 2.18 REMARK 500 NE2 GLN A 275 O HOH A 1104 2.18 REMARK 500 O HOH B 1253 O HOH B 1272 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 95 60.65 -155.81 REMARK 500 GLN A 181 115.92 -160.11 REMARK 500 SER B 95 56.41 -158.13 REMARK 500 GLN B 181 113.41 -160.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1287 DISTANCE = 6.02 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 222 NE2 REMARK 620 2 HEM A1001 NA 91.8 REMARK 620 3 HEM A1001 NB 89.2 87.5 REMARK 620 4 HEM A1001 NC 91.7 175.0 88.9 REMARK 620 5 HEM A1001 ND 97.0 90.4 173.4 92.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B1001 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 222 NE2 REMARK 620 2 HEM B1001 NA 91.4 REMARK 620 3 HEM B1001 NB 89.9 86.1 REMARK 620 4 HEM B1001 NC 91.6 175.8 90.9 REMARK 620 5 HEM B1001 ND 96.5 89.8 172.5 92.9 REMARK 620 N 1 2 3 4 DBREF 7O9L A 1 306 UNP Q556V8 Q556V8_DICDI 1 306 DBREF 7O9L B 1 306 UNP Q556V8 Q556V8_DICDI 1 306 SEQADV 7O9L GLY A -4 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L PRO A -3 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L LEU A -2 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L GLY A -1 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L SER A 0 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L GLY B -4 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L PRO B -3 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L LEU B -2 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L GLY B -1 UNP Q556V8 EXPRESSION TAG SEQADV 7O9L SER B 0 UNP Q556V8 EXPRESSION TAG SEQRES 1 A 311 GLY PRO LEU GLY SER MET ALA GLN SER THR VAL LEU PRO SEQRES 2 A 311 MET HIS CYS LEU TYR GLY ILE PHE LEU GLU GLY ASN LEU SEQRES 3 A 311 LYS ILE GLN LYS ASN ASP GLN GLU GLY LEU LYS LYS PHE SEQRES 4 A 311 LYS ASP ASN ILE LYS LYS PHE THR LEU GLU LEU ASP GLU SEQRES 5 A 311 ILE ASP LYS ILE SER PRO GLN SER ARG ILE GLY GLY ALA SEQRES 6 A 311 ILE CYS PHE SER SER ASP ILE TRP ASP THR VAL THR LYS SEQRES 7 A 311 LYS ILE SER LYS PRO LYS GLU LEU LYS SER VAL ASN THR SEQRES 8 A 311 LEU SER SER TYR MET PRO GLY THR SER GLN ARG ASP ILE SEQRES 9 A 311 LEU ILE HIS ILE ILE SER ASP ARG MET ASP THR CYS PHE SEQRES 10 A 311 LYS LEU ALA GLN ASP THR MET ARG ASN PHE GLY GLU ASP SEQRES 11 A 311 GLN LEU ASP ILE LYS GLN GLU ILE HIS GLY PHE ARG ARG SEQRES 12 A 311 VAL GLU GLU ARG ASP LEU THR ASP PHE ILE ASP GLY THR SEQRES 13 A 311 GLU ASN PRO ASP GLY ASP GLU LEU ARG THR GLN TYR GLY SEQRES 14 A 311 LEU VAL ALA ALA GLY GLN PRO ASN GLU PHE GLY SER TYR SEQRES 15 A 311 VAL PHE THR GLN ARG TYR VAL HIS ASN LEU LYS LYS TRP SEQRES 16 A 311 TYR PRO GLU PRO LEU SER VAL GLN GLN ASP THR VAL GLY SEQRES 17 A 311 ARG THR LYS LYS ASP SER ILE GLU ILE PRO ARG ASP LYS SEQRES 18 A 311 ARG PRO ILE THR SER HIS VAL SER ARG THR ASP LEU SER SEQRES 19 A 311 GLU ASN GLY LYS ASP LEU LYS ILE VAL ARG GLN SER LEU SEQRES 20 A 311 PRO TYR GLY GLN ILE THR GLY GLU LYS GLY LEU MET PHE SEQRES 21 A 311 ILE ALA TYR ALA CYS SER LEU HIS ASN ILE GLU LYS GLN SEQRES 22 A 311 LEU GLN SER MET PHE GLY GLN LEU ASP GLY LYS HIS ASP SEQRES 23 A 311 LEU LEU LEU LYS TYR THR THR PRO VAL THR GLY SER PHE SEQRES 24 A 311 TYR PHE ALA PRO SER LYS LYS GLU LEU LEU GLU LEU SEQRES 1 B 311 GLY PRO LEU GLY SER MET ALA GLN SER THR VAL LEU PRO SEQRES 2 B 311 MET HIS CYS LEU TYR GLY ILE PHE LEU GLU GLY ASN LEU SEQRES 3 B 311 LYS ILE GLN LYS ASN ASP GLN GLU GLY LEU LYS LYS PHE SEQRES 4 B 311 LYS ASP ASN ILE LYS LYS PHE THR LEU GLU LEU ASP GLU SEQRES 5 B 311 ILE ASP LYS ILE SER PRO GLN SER ARG ILE GLY GLY ALA SEQRES 6 B 311 ILE CYS PHE SER SER ASP ILE TRP ASP THR VAL THR LYS SEQRES 7 B 311 LYS ILE SER LYS PRO LYS GLU LEU LYS SER VAL ASN THR SEQRES 8 B 311 LEU SER SER TYR MET PRO GLY THR SER GLN ARG ASP ILE SEQRES 9 B 311 LEU ILE HIS ILE ILE SER ASP ARG MET ASP THR CYS PHE SEQRES 10 B 311 LYS LEU ALA GLN ASP THR MET ARG ASN PHE GLY GLU ASP SEQRES 11 B 311 GLN LEU ASP ILE LYS GLN GLU ILE HIS GLY PHE ARG ARG SEQRES 12 B 311 VAL GLU GLU ARG ASP LEU THR ASP PHE ILE ASP GLY THR SEQRES 13 B 311 GLU ASN PRO ASP GLY ASP GLU LEU ARG THR GLN TYR GLY SEQRES 14 B 311 LEU VAL ALA ALA GLY GLN PRO ASN GLU PHE GLY SER TYR SEQRES 15 B 311 VAL PHE THR GLN ARG TYR VAL HIS ASN LEU LYS LYS TRP SEQRES 16 B 311 TYR PRO GLU PRO LEU SER VAL GLN GLN ASP THR VAL GLY SEQRES 17 B 311 ARG THR LYS LYS ASP SER ILE GLU ILE PRO ARG ASP LYS SEQRES 18 B 311 ARG PRO ILE THR SER HIS VAL SER ARG THR ASP LEU SER SEQRES 19 B 311 GLU ASN GLY LYS ASP LEU LYS ILE VAL ARG GLN SER LEU SEQRES 20 B 311 PRO TYR GLY GLN ILE THR GLY GLU LYS GLY LEU MET PHE SEQRES 21 B 311 ILE ALA TYR ALA CYS SER LEU HIS ASN ILE GLU LYS GLN SEQRES 22 B 311 LEU GLN SER MET PHE GLY GLN LEU ASP GLY LYS HIS ASP SEQRES 23 B 311 LEU LEU LEU LYS TYR THR THR PRO VAL THR GLY SER PHE SEQRES 24 B 311 TYR PHE ALA PRO SER LYS LYS GLU LEU LEU GLU LEU HET HEM A1001 43 HET EDO A1002 4 HET EDO A1003 4 HET EDO A1004 4 HET EDO A1005 4 HET CYN A1006 2 HET HEM B1001 43 HET EDO B1002 4 HET EDO B1003 4 HET EDO B1004 4 HET CYN B1005 2 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM EDO 1,2-ETHANEDIOL HETNAM CYN CYANIDE ION HETSYN HEM HEME HETSYN EDO ETHYLENE GLYCOL FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 EDO 7(C2 H6 O2) FORMUL 8 CYN 2(C N 1-) FORMUL 14 HOH *393(H2 O) HELIX 1 AA1 ASP A 27 SER A 52 1 26 HELIX 2 AA2 PRO A 53 ARG A 56 5 4 HELIX 3 AA3 SER A 64 THR A 72 1 9 HELIX 4 AA4 SER A 83 SER A 88 5 6 HELIX 5 AA5 ARG A 107 GLY A 123 1 17 HELIX 6 AA6 ARG A 138 ARG A 142 5 5 HELIX 7 AA7 ASP A 155 LEU A 165 1 11 HELIX 8 AA8 ASN A 186 TYR A 191 1 6 HELIX 9 AA9 PRO A 194 GLY A 203 1 10 HELIX 10 AB1 PRO A 213 ARG A 217 5 5 HELIX 11 AB2 SER A 221 ASP A 227 1 7 HELIX 12 AB3 SER A 261 PHE A 273 1 13 HELIX 13 AB4 ASP A 281 LYS A 285 5 5 HELIX 14 AB5 SER A 299 GLU A 305 1 7 HELIX 15 AB6 ASP B 27 SER B 52 1 26 HELIX 16 AB7 PRO B 53 ARG B 56 5 4 HELIX 17 AB8 SER B 64 THR B 72 1 9 HELIX 18 AB9 SER B 83 SER B 88 5 6 HELIX 19 AC1 ARG B 107 GLY B 123 1 17 HELIX 20 AC2 ARG B 138 ARG B 142 5 5 HELIX 21 AC3 ASP B 155 LEU B 165 1 11 HELIX 22 AC4 ASN B 186 TYR B 191 1 6 HELIX 23 AC5 PRO B 194 GLY B 203 1 10 HELIX 24 AC6 PRO B 213 ARG B 217 5 5 HELIX 25 AC7 SER B 221 ASP B 227 1 7 HELIX 26 AC8 SER B 261 PHE B 273 1 13 HELIX 27 AC9 ASP B 281 LYS B 285 5 5 HELIX 28 AD1 SER B 299 GLU B 305 1 7 SHEET 1 AA1 4 GLY A 58 PHE A 63 0 SHEET 2 AA1 4 ILE A 99 SER A 105 -1 O LEU A 100 N CYS A 62 SHEET 3 AA1 4 TYR A 13 LEU A 21 -1 N LEU A 17 O ILE A 101 SHEET 4 AA1 4 LEU A 127 PHE A 136 -1 O GLY A 135 N GLY A 14 SHEET 1 AA2 4 VAL A 238 ARG A 239 0 SHEET 2 AA2 4 LYS A 251 ALA A 259 -1 O TYR A 258 N VAL A 238 SHEET 3 AA2 4 SER A 176 HIS A 185 -1 N TYR A 183 O LEU A 253 SHEET 4 AA2 4 THR A 287 PRO A 289 -1 O THR A 288 N VAL A 184 SHEET 1 AA3 4 LEU A 242 GLY A 245 0 SHEET 2 AA3 4 LYS A 251 ALA A 259 -1 O MET A 254 N LEU A 242 SHEET 3 AA3 4 SER A 176 HIS A 185 -1 N TYR A 183 O LEU A 253 SHEET 4 AA3 4 SER A 293 ALA A 297 -1 O ALA A 297 N SER A 176 SHEET 1 AA4 2 SER A 229 GLU A 230 0 SHEET 2 AA4 2 LYS A 233 ASP A 234 -1 O LYS A 233 N GLU A 230 SHEET 1 AA5 4 GLY B 58 PHE B 63 0 SHEET 2 AA5 4 ILE B 99 SER B 105 -1 O LEU B 100 N CYS B 62 SHEET 3 AA5 4 TYR B 13 LEU B 21 -1 N LEU B 17 O ILE B 101 SHEET 4 AA5 4 LEU B 127 PHE B 136 -1 O GLY B 135 N GLY B 14 SHEET 1 AA6 4 VAL B 238 ARG B 239 0 SHEET 2 AA6 4 LYS B 251 ALA B 259 -1 O TYR B 258 N VAL B 238 SHEET 3 AA6 4 SER B 176 HIS B 185 -1 N TYR B 183 O LEU B 253 SHEET 4 AA6 4 THR B 287 PRO B 289 -1 O THR B 288 N VAL B 184 SHEET 1 AA7 4 LEU B 242 GLY B 245 0 SHEET 2 AA7 4 LYS B 251 ALA B 259 -1 O MET B 254 N LEU B 242 SHEET 3 AA7 4 SER B 176 HIS B 185 -1 N TYR B 183 O LEU B 253 SHEET 4 AA7 4 SER B 293 ALA B 297 -1 O ALA B 297 N SER B 176 SHEET 1 AA8 2 SER B 229 GLU B 230 0 SHEET 2 AA8 2 LYS B 233 ASP B 234 -1 O LYS B 233 N GLU B 230 LINK NE2 HIS A 222 FE HEM A1001 1555 1555 2.20 LINK NE2 HIS B 222 FE HEM B1001 1555 1555 2.18 CRYST1 141.050 141.050 95.480 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007090 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007090 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010473 0.00000