HEADER VIRAL PROTEIN 30-APR-21 7ODX TITLE CYANOPHAGE S-2L SUCCINOAMINODEOXYADENYLATE SYNTHETASE (PURZ) BOUND TO TITLE 2 DGMP AND DATP AS AN ENERGY DONOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINOAMINODEOXYADENYLATE SYNTHETASE (PURZ); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYANOPHAGE S-2L; SOURCE 3 ORGANISM_TAXID: 260586; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS S-2L, SUCCINOAMINODEOXYADENYLATE SYNTHETASE, PURZ, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.CZERNECKI,M.DELARUE REVDAT 2 31-JAN-24 7ODX 1 REMARK REVDAT 1 01-SEP-21 7ODX 0 JRNL AUTH D.CZERNECKI,F.BONHOMME,P.A.KAMINSKI,M.DELARUE JRNL TITL CHARACTERIZATION OF A TRIAD OF GENES IN CYANOPHAGE S-2L JRNL TITL 2 SUFFICIENT TO REPLACE ADENINE BY 2-AMINOADENINE IN BACTERIAL JRNL TITL 3 DNA. JRNL REF NAT COMMUN V. 12 4710 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34354070 JRNL DOI 10.1038/S41467-021-25064-X REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.338 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 54761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4954 - 4.6025 1.00 2867 151 0.1572 0.1592 REMARK 3 2 4.6025 - 3.6537 1.00 2703 142 0.1268 0.1455 REMARK 3 3 3.6537 - 3.1920 1.00 2657 140 0.1375 0.1463 REMARK 3 4 3.1920 - 2.9002 1.00 2650 139 0.1533 0.1689 REMARK 3 5 2.9002 - 2.6924 1.00 2624 138 0.1578 0.1738 REMARK 3 6 2.6924 - 2.5336 1.00 2605 137 0.1557 0.1825 REMARK 3 7 2.5336 - 2.4068 1.00 2599 137 0.1529 0.1733 REMARK 3 8 2.4068 - 2.3020 1.00 2599 137 0.1517 0.1911 REMARK 3 9 2.3020 - 2.2134 1.00 2588 136 0.1440 0.1876 REMARK 3 10 2.2134 - 2.1370 1.00 2596 137 0.1514 0.1811 REMARK 3 11 2.1370 - 2.0702 1.00 2584 136 0.1661 0.1851 REMARK 3 12 2.0702 - 2.0110 1.00 2553 134 0.1736 0.1705 REMARK 3 13 2.0110 - 1.9581 1.00 2581 136 0.1673 0.1678 REMARK 3 14 1.9581 - 1.9103 1.00 2574 136 0.1740 0.2220 REMARK 3 15 1.9103 - 1.8669 1.00 2549 134 0.1885 0.1829 REMARK 3 16 1.8669 - 1.8271 1.00 2561 135 0.2207 0.2277 REMARK 3 17 1.8271 - 1.7906 1.00 2562 135 0.2706 0.3238 REMARK 3 18 1.7906 - 1.7568 1.00 2548 134 0.3430 0.3916 REMARK 3 19 1.7568 - 1.7254 1.00 2561 135 0.3972 0.4614 REMARK 3 20 1.7254 - 1.6962 0.97 2462 129 0.4243 0.3981 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.259 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.713 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2821 REMARK 3 ANGLE : 1.004 3856 REMARK 3 CHIRALITY : 0.068 431 REMARK 3 PLANARITY : 0.005 530 REMARK 3 DIHEDRAL : 26.458 1061 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -38.8667 22.2397 4.4839 REMARK 3 T TENSOR REMARK 3 T11: 0.1494 T22: 0.2122 REMARK 3 T33: 0.2045 T12: -0.0077 REMARK 3 T13: -0.0067 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.4542 L22: 0.4818 REMARK 3 L33: 1.2195 L12: -0.1032 REMARK 3 L13: -0.0045 L23: -0.1356 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: -0.0236 S13: 0.0191 REMARK 3 S21: 0.0373 S22: 0.0071 S23: -0.1137 REMARK 3 S31: -0.0164 S32: 0.1849 S33: -0.0077 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ODX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-APR-21. REMARK 100 THE DEPOSITION ID IS D_1292114089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980130 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54836 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.696 REMARK 200 RESOLUTION RANGE LOW (A) : 44.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 39.60 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 39.40 REMARK 200 R MERGE FOR SHELL (I) : 2.66100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6FM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% V/V TACSIMATE; 2% W/V PEG 3350; REMARK 280 100 MM HEPES PH 7, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.88667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.44333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.88667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.44333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 94.88667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 47.44333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 94.88667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 47.44333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -108.18000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 817 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 838 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 THR A -4 REMARK 465 GLY A -3 REMARK 465 ASP A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 PRO A 5 REMARK 465 PRO A 6 REMARK 465 TYR A 7 REMARK 465 TYR A 8 REMARK 465 ARG A 359 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 551 O HOH A 773 2.14 REMARK 500 O HOH A 767 O HOH A 822 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 808 O HOH A 808 10554 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 20 -125.65 -129.76 REMARK 500 PRO A 48 23.11 -79.71 REMARK 500 LEU A 127 -133.76 -127.49 REMARK 500 GLN A 190 -144.75 62.67 REMARK 500 THR A 344 59.53 30.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 891 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 892 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A 893 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 894 DISTANCE = 6.66 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DGP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DTP A 402 DBREF 7ODX A -5 359 PDB 7ODX 7ODX -5 359 SEQRES 1 A 365 GLY THR GLY ASP GLY SER MET LEU SER ILE PRO PRO TYR SEQRES 2 A 365 TYR ARG VAL LYS ASN CYS ASN LEU ILE VAL ASP CYS GLN SEQRES 3 A 365 TYR GLY SER THR GLY LYS GLY LEU LEU ALA GLY TYR LEU SEQRES 4 A 365 GLY ALA LEU GLU ALA PRO GLN VAL LEU CYS MET ALA PRO SEQRES 5 A 365 SER PRO ASN ALA GLY HIS THR LEU VAL GLU GLU ASP GLY SEQRES 6 A 365 THR ALA ARG VAL HIS LYS MET LEU PRO LEU GLY ILE THR SEQRES 7 A 365 SER PRO SER LEU GLU ARG ILE TYR LEU GLY PRO GLY SER SEQRES 8 A 365 VAL ILE ASP MET ASP ARG LEU LEU GLU GLU TYR LEU ALA SEQRES 9 A 365 LEU PRO ARG GLN VAL GLU LEU TRP VAL HIS GLN ASN ALA SEQRES 10 A 365 ALA VAL VAL LEU GLN GLU HIS ARG ASP GLU GLU ALA ALA SEQRES 11 A 365 GLY GLY LEU ALA PRO GLY SER THR ARG SER GLY ALA GLY SEQRES 12 A 365 SER ALA PHE ILE ALA LYS ILE ARG ARG ARG PRO GLY THR SEQRES 13 A 365 LEU LEU PHE GLY GLU ALA VAL ARG ASP HIS PRO LEU HIS SEQRES 14 A 365 GLY VAL VAL ARG VAL VAL ASP THR ARG THR ALA GLN ASP SEQRES 15 A 365 MET LEU PHE ARG THR ARG SER ILE GLN ALA GLU GLY CYS SEQRES 16 A 365 GLN GLY TYR SER LEU SER VAL HIS HIS GLY ALA TYR PRO SEQRES 17 A 365 TYR CYS THR ALA ARG ASP VAL THR THR ALA GLN LEU ILE SEQRES 18 A 365 ALA ASP CYS GLY LEU PRO TYR ASP VAL ALA ARG ILE ALA SEQRES 19 A 365 ARG VAL VAL GLY SER MET ARG THR TYR PRO ILE ARG VAL SEQRES 20 A 365 ALA ASN ARG PRO GLU ALA GLY GLU TRP SER GLY PRO CYS SEQRES 21 A 365 TYR PRO ASP SER VAL GLU CYS GLN PHE ALA ASP LEU GLY SEQRES 22 A 365 LEU GLU GLN GLU TYR THR THR VAL THR LYS LEU PRO ARG SEQRES 23 A 365 ARG ILE PHE THR PHE SER ALA ILE GLN ALA HIS GLU ALA SEQRES 24 A 365 ILE ALA GLN ASN GLY VAL ASP GLU VAL PHE LEU ASN PHE SEQRES 25 A 365 ALA GLN TYR PRO PRO SER LEU GLY ALA LEU GLU ASP ILE SEQRES 26 A 365 LEU ASP ALA ILE GLU ALA ARG ALA GLU VAL THR TYR VAL SEQRES 27 A 365 GLY PHE GLY PRO LYS VAL THR ASP VAL TYR HIS THR PRO SEQRES 28 A 365 THR ARG ALA GLU LEU GLU GLY LEU TYR ALA ARG TYR ARG SEQRES 29 A 365 ARG HET DGP A 401 23 HET DTP A 402 30 HETNAM DGP 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE FORMUL 2 DGP C10 H14 N5 O7 P FORMUL 3 DTP C10 H16 N5 O12 P3 FORMUL 4 HOH *394(H2 O) HELIX 1 AA1 GLY A 25 ALA A 38 1 14 HELIX 2 AA2 LEU A 69 SER A 73 5 5 HELIX 3 AA3 ASP A 88 ALA A 98 1 11 HELIX 4 AA4 LEU A 115 ALA A 124 1 10 HELIX 5 AA5 GLY A 135 ARG A 146 1 12 HELIX 6 AA6 LEU A 152 VAL A 157 1 6 HELIX 7 AA7 ARG A 158 VAL A 166 5 9 HELIX 8 AA8 ASP A 170 ARG A 180 1 11 HELIX 9 AA9 GLY A 191 SER A 195 5 5 HELIX 10 AB1 THR A 210 GLY A 219 1 10 HELIX 11 AB2 PRO A 221 ILE A 227 1 7 HELIX 12 AB3 ARG A 244 GLY A 248 5 5 HELIX 13 AB4 GLN A 262 GLY A 267 5 6 HELIX 14 AB5 SER A 286 GLY A 298 1 13 HELIX 15 AB6 SER A 312 ALA A 325 1 14 HELIX 16 AB7 LYS A 337 THR A 339 5 3 HELIX 17 AB8 THR A 346 TYR A 357 1 12 SHEET 1 AA110 ARG A 167 VAL A 169 0 SHEET 2 AA110 GLU A 104 HIS A 108 1 N LEU A 105 O ARG A 167 SHEET 3 AA110 ARG A 78 LEU A 81 1 N ILE A 79 O TRP A 106 SHEET 4 AA110 VAL A 41 MET A 44 1 N LEU A 42 O TYR A 80 SHEET 5 AA110 SER A 183 GLU A 187 1 O GLN A 185 N CYS A 43 SHEET 6 AA110 ASN A 12 ASP A 18 1 N ASN A 14 O ALA A 186 SHEET 7 AA110 ARG A 229 ARG A 235 1 O VAL A 231 N LEU A 15 SHEET 8 AA110 GLU A 301 ASN A 305 1 O ASN A 305 N MET A 234 SHEET 9 AA110 GLU A 328 GLY A 333 1 O GLY A 333 N LEU A 304 SHEET 10 AA110 VAL A 341 HIS A 343 -1 O TYR A 342 N VAL A 332 SHEET 1 AA2 2 HIS A 52 VAL A 55 0 SHEET 2 AA2 2 ALA A 61 HIS A 64 -1 O HIS A 64 N HIS A 52 SHEET 1 AA3 2 VAL A 86 ILE A 87 0 SHEET 2 AA3 2 ALA A 112 VAL A 113 1 O ALA A 112 N ILE A 87 SHEET 1 AA4 3 ILE A 239 ARG A 240 0 SHEET 2 AA4 3 ARG A 281 PHE A 283 -1 O ARG A 281 N ARG A 240 SHEET 3 AA4 3 GLU A 260 CYS A 261 -1 N CYS A 261 O ILE A 282 CISPEP 1 TYR A 201 PRO A 202 0 3.05 SITE 1 AC1 20 TYR A 21 ASN A 49 ALA A 50 GLY A 130 SITE 2 AC1 20 SER A 131 THR A 132 ARG A 146 GLN A 190 SITE 3 AC1 20 LEU A 194 CYS A 204 THR A 205 VAL A 241 SITE 4 AC1 20 DTP A 402 HOH A 511 HOH A 526 HOH A 536 SITE 5 AC1 20 HOH A 558 HOH A 600 HOH A 612 HOH A 639 SITE 1 AC2 22 SER A 23 THR A 24 GLY A 25 LYS A 26 SITE 2 AC2 22 GLY A 27 ALA A 50 GLY A 51 HIS A 52 SITE 3 AC2 22 THR A 53 ASN A 305 PHE A 306 GLN A 308 SITE 4 AC2 22 GLY A 335 DGP A 401 HOH A 515 HOH A 548 SITE 5 AC2 22 HOH A 555 HOH A 587 HOH A 620 HOH A 660 SITE 6 AC2 22 HOH A 683 HOH A 734 CRYST1 108.180 108.180 142.330 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009244 0.005337 0.000000 0.00000 SCALE2 0.000000 0.010674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007026 0.00000