data_7OFG # _entry.id 7OFG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7OFG pdb_00007ofg 10.2210/pdb7ofg/pdb WWPDB D_1292115193 ? ? BMRB 34620 ? 10.13018/BMR34620 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-10-13 2 'Structure model' 1 1 2023-06-14 3 'Structure model' 1 2 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_status 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_entry_details 6 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 2 3 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7OFG _pdbx_database_status.recvd_initial_deposition_date 2021-05-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Oxytocin NMR solution structure' _pdbx_database_related.db_id 34620 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shalev, D.E.' 1 0000-0003-1100-785X 'Alshanski, I.' 2 0000-0002-9310-1921 'Yitzchaik, S.' 3 0000-0001-5021-5139 'Hurevich, M.' 4 0000-0002-1038-8104 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GW _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Inorg.Chem. _citation.journal_id_ASTM JJBCFA _citation.journal_id_CSD ? _citation.journal_id_ISSN 1432-1327 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 809 _citation.page_last 815 _citation.title 'Determining the structure and binding mechanism of oxytocin-Cu 2+ complex using paramagnetic relaxation enhancement NMR analysis.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1007/s00775-021-01897-1 _citation.pdbx_database_id_PubMed 34459989 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Alshanski, I.' 1 0000-0002-9310-1921 primary 'Shalev, D.E.' 2 ? primary 'Yitzchaik, S.' 3 0000-0001-5021-5139 primary 'Hurevich, M.' 4 0000-0002-1038-8104 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Oxytocin _entity.formula_weight 1008.196 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Amidated C-terminus, Cys-Cys disulfide bond.' # _entity_name_com.entity_id 1 _entity_name_com.name Ocytocin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'CYIQNCPLG(NH2)' _entity_poly.pdbx_seq_one_letter_code_can CYIQNCPLGX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 TYR n 1 3 ILE n 1 4 GLN n 1 5 ASN n 1 6 CYS n 1 7 PRO n 1 8 LEU n 1 9 GLY n 1 10 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 1 1 CYS CYS A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 NH2 10 10 9 NH2 GLY A . n # _software.citation_id ? _software.classification 'model building' _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location https://www.rbvi.ucsf.edu/chimerax/ _software.mods ? _software.name 'UCSF ChimeraX' _software.os Windows _software.os_version ? _software.type package _software.version 1.1/v9 _software.pdbx_ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7OFG _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7OFG _struct.title 'Oxytocin NMR solution structure' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7OFG _struct_keywords.text 'natural peptide, cyclic, disulfide bond, HORMONE' _struct_keywords.pdbx_keywords HORMONE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NEU1_HUMAN _struct_ref.pdbx_db_accession P01178 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code CYIQNCPLG _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7OFG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 9 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01178 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 28 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 9 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7OFG _struct_ref_seq_dif.mon_id NH2 _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 10 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P01178 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details amidation _struct_ref_seq_dif.pdbx_auth_seq_num 10 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 6 SG ? ? A CYS 1 A CYS 6 1_555 ? ? ? ? ? ? ? 2.023 ? ? covale1 covale both ? A GLY 9 C ? ? ? 1_555 A NH2 10 N ? ? A GLY 9 A NH2 10 1_555 ? ? ? ? ? ? ? 1.305 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NH2 A 10 ? GLY A 9 ? NH2 A 10 ? 1_555 GLY A 9 ? 1_555 . . GLY 12 NH2 None 'Terminal amidation' 2 CYS A 1 ? CYS A 6 ? CYS A 1 ? 1_555 CYS A 6 ? 1_555 SG SG . . . None 'Disulfide bridge' # _pdbx_entry_details.entry_id 7OFG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 O A PRO 7 ? ? H A GLY 9 ? ? 1.60 2 8 H A TYR 2 ? ? O A ASN 5 ? ? 1.58 3 10 H A TYR 2 ? ? O A ASN 5 ? ? 1.53 4 12 H A ILE 3 ? ? O A ASN 5 ? ? 1.55 5 12 H A TYR 2 ? ? O A ASN 5 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 2 ? ? -127.80 -130.85 2 1 ILE A 3 ? ? -60.21 -148.35 3 1 GLN A 4 ? ? -46.33 -17.25 4 1 PRO A 7 ? ? -68.05 -141.67 5 1 LEU A 8 ? ? -57.09 179.99 6 2 TYR A 2 ? ? -106.74 -109.41 7 2 ILE A 3 ? ? -64.40 -148.66 8 2 PRO A 7 ? ? -65.70 -141.67 9 2 LEU A 8 ? ? -58.67 174.81 10 3 TYR A 2 ? ? -107.94 -102.50 11 3 ILE A 3 ? ? -72.27 -147.11 12 3 PRO A 7 ? ? -66.12 -141.51 13 4 TYR A 2 ? ? -129.20 -136.20 14 4 ILE A 3 ? ? -58.48 -144.34 15 4 GLN A 4 ? ? -45.67 -18.04 16 4 PRO A 7 ? ? -67.81 -141.53 17 5 TYR A 2 ? ? -127.72 -135.84 18 5 ILE A 3 ? ? -58.46 -144.55 19 5 GLN A 4 ? ? -46.28 -17.55 20 5 PRO A 7 ? ? -67.60 -141.22 21 5 LEU A 8 ? ? -61.73 62.79 22 6 TYR A 2 ? ? -113.31 -143.75 23 6 ILE A 3 ? ? -59.29 -143.00 24 6 GLN A 4 ? ? -44.80 -17.97 25 6 PRO A 7 ? ? -66.86 -141.32 26 7 TYR A 2 ? ? -128.65 -131.16 27 7 ILE A 3 ? ? -60.01 -148.49 28 7 GLN A 4 ? ? -46.24 -17.36 29 8 TYR A 2 ? ? -118.59 -121.13 30 8 ILE A 3 ? ? -64.31 -147.43 31 8 GLN A 4 ? ? -49.03 -15.75 32 9 TYR A 2 ? ? -122.45 -128.97 33 9 ILE A 3 ? ? -60.14 -148.36 34 9 GLN A 4 ? ? -46.41 -17.17 35 10 TYR A 2 ? ? -107.94 -80.50 36 10 ILE A 3 ? ? -97.69 -146.12 37 10 LEU A 8 ? ? -47.50 156.05 38 11 TYR A 2 ? ? -86.88 -95.77 39 11 ILE A 3 ? ? -84.62 -145.44 40 11 PRO A 7 ? ? -76.93 -141.91 41 12 ILE A 3 ? ? -140.94 -145.51 42 12 GLN A 4 ? ? -39.61 -34.21 43 12 PRO A 7 ? ? -66.33 -141.76 44 13 TYR A 2 ? ? -112.99 -141.80 45 13 ILE A 3 ? ? -59.37 -143.15 46 13 GLN A 4 ? ? -46.02 -18.42 47 14 TYR A 2 ? ? -133.74 -138.50 48 14 ILE A 3 ? ? -58.19 -145.72 49 14 GLN A 4 ? ? -36.95 -34.07 # _pdbx_nmr_ensemble.entry_id 7OFG _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 14 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7OFG _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mM ammonium acetate, 3.3 mM Oxytocin, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label OT/AA _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '3.3 mM oxytocin in 5 mM fresh ammonium acetate buffer, pH 6.7, in TDW, filtered at 2 micron with 10% deuterium oxide.' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'ammonium acetate' 5 ? mM 'natural abundance' 1 Oxytocin 3.3 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 297.3 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.00665 _pdbx_nmr_exptl_sample_conditions.details ;Ammonium acetate buffer was used since it does not complex copper, however the buffer suffered from rapid bacterial growth within a couple of days and we had to prepare fresh samples for each experiment. ; _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units M _pdbx_nmr_exptl_sample_conditions.label OT/AA _pdbx_nmr_exptl_sample_conditions.pH_err 0.1 _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err 0.1 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H COSY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 1 1 '2D 1H-1H ROESY' 1 isotropic # _pdbx_nmr_refine.entry_id 7OFG _pdbx_nmr_refine.method 'DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details 'Based on 59 ROE restraints' _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 5 collection TopSpin 3.6.2 'Bruker Biospin' 1 'chemical shift assignment' NMRFAM-SPARKY 1.470 'Lee, W.; Tonelli, M.; Markley, J. L.' 2 'structure calculation' CNS 3.2 'Brunger, Adams, Clore, Gros, Nilges and Read' 3 'data analysis' 'UCSF Chimera' 1.14 'Pettersen, E. F.; Goddard, T. D.; Huang, C. C.; Couch, G. S.; Greenblatt, D. M.; Meng, E. C.; Ferrin, T. E.' 4 'peak picking' NMRFAM-SPARKY 1.470 'Lee, W.; Tonelli, M.; Markley, J. L.' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 CYS N N N N 18 CYS CA C N R 19 CYS C C N N 20 CYS O O N N 21 CYS CB C N N 22 CYS SG S N N 23 CYS OXT O N N 24 CYS H H N N 25 CYS H2 H N N 26 CYS HA H N N 27 CYS HB2 H N N 28 CYS HB3 H N N 29 CYS HG H N N 30 CYS HXT H N N 31 GLN N N N N 32 GLN CA C N S 33 GLN C C N N 34 GLN O O N N 35 GLN CB C N N 36 GLN CG C N N 37 GLN CD C N N 38 GLN OE1 O N N 39 GLN NE2 N N N 40 GLN OXT O N N 41 GLN H H N N 42 GLN H2 H N N 43 GLN HA H N N 44 GLN HB2 H N N 45 GLN HB3 H N N 46 GLN HG2 H N N 47 GLN HG3 H N N 48 GLN HE21 H N N 49 GLN HE22 H N N 50 GLN HXT H N N 51 GLY N N N N 52 GLY CA C N N 53 GLY C C N N 54 GLY O O N N 55 GLY OXT O N N 56 GLY H H N N 57 GLY H2 H N N 58 GLY HA2 H N N 59 GLY HA3 H N N 60 GLY HXT H N N 61 ILE N N N N 62 ILE CA C N S 63 ILE C C N N 64 ILE O O N N 65 ILE CB C N S 66 ILE CG1 C N N 67 ILE CG2 C N N 68 ILE CD1 C N N 69 ILE OXT O N N 70 ILE H H N N 71 ILE H2 H N N 72 ILE HA H N N 73 ILE HB H N N 74 ILE HG12 H N N 75 ILE HG13 H N N 76 ILE HG21 H N N 77 ILE HG22 H N N 78 ILE HG23 H N N 79 ILE HD11 H N N 80 ILE HD12 H N N 81 ILE HD13 H N N 82 ILE HXT H N N 83 LEU N N N N 84 LEU CA C N S 85 LEU C C N N 86 LEU O O N N 87 LEU CB C N N 88 LEU CG C N N 89 LEU CD1 C N N 90 LEU CD2 C N N 91 LEU OXT O N N 92 LEU H H N N 93 LEU H2 H N N 94 LEU HA H N N 95 LEU HB2 H N N 96 LEU HB3 H N N 97 LEU HG H N N 98 LEU HD11 H N N 99 LEU HD12 H N N 100 LEU HD13 H N N 101 LEU HD21 H N N 102 LEU HD22 H N N 103 LEU HD23 H N N 104 LEU HXT H N N 105 NH2 N N N N 106 NH2 HN1 H N N 107 NH2 HN2 H N N 108 PRO N N N N 109 PRO CA C N S 110 PRO C C N N 111 PRO O O N N 112 PRO CB C N N 113 PRO CG C N N 114 PRO CD C N N 115 PRO OXT O N N 116 PRO H H N N 117 PRO HA H N N 118 PRO HB2 H N N 119 PRO HB3 H N N 120 PRO HG2 H N N 121 PRO HG3 H N N 122 PRO HD2 H N N 123 PRO HD3 H N N 124 PRO HXT H N N 125 TYR N N N N 126 TYR CA C N S 127 TYR C C N N 128 TYR O O N N 129 TYR CB C N N 130 TYR CG C Y N 131 TYR CD1 C Y N 132 TYR CD2 C Y N 133 TYR CE1 C Y N 134 TYR CE2 C Y N 135 TYR CZ C Y N 136 TYR OH O N N 137 TYR OXT O N N 138 TYR H H N N 139 TYR H2 H N N 140 TYR HA H N N 141 TYR HB2 H N N 142 TYR HB3 H N N 143 TYR HD1 H N N 144 TYR HD2 H N N 145 TYR HE1 H N N 146 TYR HE2 H N N 147 TYR HH H N N 148 TYR HXT H N N 149 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 CYS N CA sing N N 17 CYS N H sing N N 18 CYS N H2 sing N N 19 CYS CA C sing N N 20 CYS CA CB sing N N 21 CYS CA HA sing N N 22 CYS C O doub N N 23 CYS C OXT sing N N 24 CYS CB SG sing N N 25 CYS CB HB2 sing N N 26 CYS CB HB3 sing N N 27 CYS SG HG sing N N 28 CYS OXT HXT sing N N 29 GLN N CA sing N N 30 GLN N H sing N N 31 GLN N H2 sing N N 32 GLN CA C sing N N 33 GLN CA CB sing N N 34 GLN CA HA sing N N 35 GLN C O doub N N 36 GLN C OXT sing N N 37 GLN CB CG sing N N 38 GLN CB HB2 sing N N 39 GLN CB HB3 sing N N 40 GLN CG CD sing N N 41 GLN CG HG2 sing N N 42 GLN CG HG3 sing N N 43 GLN CD OE1 doub N N 44 GLN CD NE2 sing N N 45 GLN NE2 HE21 sing N N 46 GLN NE2 HE22 sing N N 47 GLN OXT HXT sing N N 48 GLY N CA sing N N 49 GLY N H sing N N 50 GLY N H2 sing N N 51 GLY CA C sing N N 52 GLY CA HA2 sing N N 53 GLY CA HA3 sing N N 54 GLY C O doub N N 55 GLY C OXT sing N N 56 GLY OXT HXT sing N N 57 ILE N CA sing N N 58 ILE N H sing N N 59 ILE N H2 sing N N 60 ILE CA C sing N N 61 ILE CA CB sing N N 62 ILE CA HA sing N N 63 ILE C O doub N N 64 ILE C OXT sing N N 65 ILE CB CG1 sing N N 66 ILE CB CG2 sing N N 67 ILE CB HB sing N N 68 ILE CG1 CD1 sing N N 69 ILE CG1 HG12 sing N N 70 ILE CG1 HG13 sing N N 71 ILE CG2 HG21 sing N N 72 ILE CG2 HG22 sing N N 73 ILE CG2 HG23 sing N N 74 ILE CD1 HD11 sing N N 75 ILE CD1 HD12 sing N N 76 ILE CD1 HD13 sing N N 77 ILE OXT HXT sing N N 78 LEU N CA sing N N 79 LEU N H sing N N 80 LEU N H2 sing N N 81 LEU CA C sing N N 82 LEU CA CB sing N N 83 LEU CA HA sing N N 84 LEU C O doub N N 85 LEU C OXT sing N N 86 LEU CB CG sing N N 87 LEU CB HB2 sing N N 88 LEU CB HB3 sing N N 89 LEU CG CD1 sing N N 90 LEU CG CD2 sing N N 91 LEU CG HG sing N N 92 LEU CD1 HD11 sing N N 93 LEU CD1 HD12 sing N N 94 LEU CD1 HD13 sing N N 95 LEU CD2 HD21 sing N N 96 LEU CD2 HD22 sing N N 97 LEU CD2 HD23 sing N N 98 LEU OXT HXT sing N N 99 NH2 N HN1 sing N N 100 NH2 N HN2 sing N N 101 PRO N CA sing N N 102 PRO N CD sing N N 103 PRO N H sing N N 104 PRO CA C sing N N 105 PRO CA CB sing N N 106 PRO CA HA sing N N 107 PRO C O doub N N 108 PRO C OXT sing N N 109 PRO CB CG sing N N 110 PRO CB HB2 sing N N 111 PRO CB HB3 sing N N 112 PRO CG CD sing N N 113 PRO CG HG2 sing N N 114 PRO CG HG3 sing N N 115 PRO CD HD2 sing N N 116 PRO CD HD3 sing N N 117 PRO OXT HXT sing N N 118 TYR N CA sing N N 119 TYR N H sing N N 120 TYR N H2 sing N N 121 TYR CA C sing N N 122 TYR CA CB sing N N 123 TYR CA HA sing N N 124 TYR C O doub N N 125 TYR C OXT sing N N 126 TYR CB CG sing N N 127 TYR CB HB2 sing N N 128 TYR CB HB3 sing N N 129 TYR CG CD1 doub Y N 130 TYR CG CD2 sing Y N 131 TYR CD1 CE1 sing Y N 132 TYR CD1 HD1 sing N N 133 TYR CD2 CE2 doub Y N 134 TYR CD2 HD2 sing N N 135 TYR CE1 CZ doub Y N 136 TYR CE1 HE1 sing N N 137 TYR CE2 CZ sing Y N 138 TYR CE2 HE2 sing N N 139 TYR CZ OH sing N N 140 TYR OH HH sing N N 141 TYR OXT HXT sing N N 142 # _pdbx_audit_support.funding_organization 'European Union (EU)' _pdbx_audit_support.country Israel _pdbx_audit_support.grant_number 664786 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE II' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.details XYZ-gradients # _atom_sites.entry_id 7OFG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_