HEADER ENDOCYTOSIS 05-MAY-21 7OFP TITLE APO STRUCTURE OF MU2 ADAPTIN SUBUNIT (AP50) OF AP2 CLATHRIN ADAPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: AP-2 COMPLEX SUBUNIT MU; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AP-2 MU CHAIN,ADAPTOR PROTEIN COMPLEX AP-2 SUBUNIT MU, COMPND 5 ADAPTOR-RELATED PROTEIN COMPLEX 2 SUBUNIT MU,CLATHRIN ASSEMBLY COMPND 6 PROTEIN COMPLEX 2 MU MEDIUM CHAIN,CLATHRIN COAT ASSEMBLY PROTEIN COMPND 7 AP50,CLATHRIN COAT-ASSOCIATED PROTEIN AP50,MU2-ADAPTIN,PLASMA COMPND 8 MEMBRANE ADAPTOR AP-2 50 KDA PROTEIN; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: AP2M1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (PLYSS); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMW KEYWDS CLATHRIN-MEDIATED ENDOCYTOSIS (CME), YXXPHI MOTIF, PI(4, 5)P2, KEYWDS 2 PROTEIN RECYCLING, PLASMA MEMBRANE, ENDOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR N.R.ZACCAI,B.T.KELLY,P.R.EVANS,D.J.OWEN REVDAT 2 31-JAN-24 7OFP 1 REMARK REVDAT 1 01-JUN-22 7OFP 0 JRNL AUTH N.R.ZACCAI,Z.KADLECOVA,V.K.DICKSON,K.KOROBCHEVSKAYA, JRNL AUTH 2 J.KAMENICKY,O.KOVTUN,P.K.UMASANKAR,A.G.WROBEL,J.G.G.KAUFMAN, JRNL AUTH 3 S.R.GRAY,K.QU,P.R.EVANS,M.FRITZSCHE,F.SROUBEK,S.HONING, JRNL AUTH 4 J.A.G.BRIGGS,B.T.KELLY,D.J.OWEN,L.M.TRAUB JRNL TITL FCHO CONTROLS AP2'S INITIATING ROLE IN ENDOCYTOSIS THROUGH A JRNL TITL 2 PTDINS(4,5)P 2 -DEPENDENT SWITCH. JRNL REF SCI ADV V. 8 N2018 2022 JRNL REFN ESSN 2375-2548 JRNL PMID 35486718 JRNL DOI 10.1126/SCIADV.ABN2018 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19RC1_4016 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.210 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 74655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 7527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 77.6800 - 5.9700 1.00 4657 237 0.2197 0.2205 REMARK 3 2 5.9600 - 4.7300 1.00 4703 237 0.1598 0.1654 REMARK 3 3 4.7300 - 4.1400 1.00 4600 296 0.1373 0.1591 REMARK 3 4 4.1400 - 3.7600 1.00 4661 270 0.1497 0.1765 REMARK 3 5 3.7600 - 3.4900 1.00 4721 192 0.1565 0.2024 REMARK 3 6 3.4900 - 3.2800 1.00 4694 241 0.1707 0.1821 REMARK 3 7 3.2800 - 3.1200 1.00 4696 240 0.1689 0.1958 REMARK 3 8 3.1200 - 2.9800 1.00 4646 258 0.1784 0.2251 REMARK 3 9 2.9800 - 2.8700 1.00 4652 278 0.1821 0.2121 REMARK 3 10 2.8700 - 2.7700 1.00 4680 240 0.1815 0.2045 REMARK 3 11 2.7700 - 2.6800 1.00 4684 218 0.2014 0.2246 REMARK 3 12 2.6800 - 2.6100 1.00 4652 286 0.1887 0.2206 REMARK 3 13 2.6100 - 2.5400 1.00 4744 168 0.1912 0.2152 REMARK 3 14 2.5400 - 2.4800 1.00 4684 238 0.1850 0.2305 REMARK 3 15 2.4800 - 2.4200 1.00 4662 276 0.1983 0.2014 REMARK 3 16 2.4200 - 2.3700 1.00 4597 304 0.1939 0.2007 REMARK 3 17 2.3700 - 2.3200 1.00 4750 196 0.2075 0.2261 REMARK 3 18 2.3200 - 2.2800 1.00 4653 245 0.2022 0.2429 REMARK 3 19 2.2800 - 2.2400 1.00 4620 270 0.2068 0.2341 REMARK 3 20 2.2400 - 2.2000 1.00 4734 216 0.2172 0.2931 REMARK 3 21 2.2000 - 2.1600 1.00 4590 281 0.2299 0.2497 REMARK 3 22 2.1600 - 2.1300 1.00 4708 230 0.2483 0.2651 REMARK 3 23 2.1300 - 2.1000 1.00 4609 306 0.2502 0.2842 REMARK 3 24 2.1000 - 2.0700 1.00 4639 282 0.2577 0.2865 REMARK 3 25 2.0700 - 2.0400 1.00 4635 262 0.2691 0.3068 REMARK 3 26 2.0400 - 2.0100 1.00 4680 246 0.2758 0.2813 REMARK 3 27 2.0100 - 1.9900 1.00 4687 236 0.2871 0.3153 REMARK 3 28 1.9900 - 1.9600 0.99 4669 246 0.3029 0.3187 REMARK 3 29 1.9600 - 1.9400 1.00 4572 302 0.3166 0.3484 REMARK 3 30 1.9400 - 1.9200 0.97 4572 230 0.3263 0.3504 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.222 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.795 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 4404 REMARK 3 ANGLE : 1.254 5910 REMARK 3 CHIRALITY : 0.085 647 REMARK 3 PLANARITY : 0.012 738 REMARK 3 DIHEDRAL : 9.831 605 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OFP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292115682. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74711 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 77.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : 0.22300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 6.37900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1BXX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MG/ML) AND PEPTIDE REMARK 280 (DVDEEGYSIKPETNQNDTKENHFYSS) (2MG/ML) WERE EQUILIBRATED AGAINST REMARK 280 1.5M AMMONIUM SULPHATE 0.1M HEPES PH 7.0. CRYSTALS WERE CRYO- REMARK 280 PROTECTED BY SOAKING IN MOTHER LIQUOR SUPPLEMENTED WITH 20% REMARK 280 GLYCEROL AND PEPTIDE (PEPTIDE DID NOT CRYSTALLISE)., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.11200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.55600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.33400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.77800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.89000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 HIS A 156 REMARK 465 HIS A 157 REMARK 465 GLU A 223 REMARK 465 LYS A 224 REMARK 465 GLN A 225 REMARK 465 GLY A 226 REMARK 465 LYS A 227 REMARK 465 GLY A 228 REMARK 465 THR A 229 REMARK 465 ALA A 230 REMARK 465 ASP A 231 REMARK 465 GLU A 232 REMARK 465 THR A 233 REMARK 465 SER A 234 REMARK 465 LYS A 235 REMARK 465 SER A 236 REMARK 465 GLY A 237 REMARK 465 LYS A 238 REMARK 465 GLN A 239 REMARK 465 MET B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 465 HIS B 154 REMARK 465 HIS B 155 REMARK 465 HIS B 156 REMARK 465 HIS B 157 REMARK 465 GLY B 228 REMARK 465 THR B 229 REMARK 465 ALA B 230 REMARK 465 ASP B 231 REMARK 465 GLU B 232 REMARK 465 THR B 233 REMARK 465 SER B 234 REMARK 465 LYS B 235 REMARK 465 SER B 236 REMARK 465 GLY B 237 REMARK 465 LYS B 238 REMARK 465 GLN B 239 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 246 CB CYS A 246 SG -0.100 REMARK 500 LYS B 224 CE LYS B 224 NZ 0.156 REMARK 500 CYS B 246 CB CYS B 246 SG -0.188 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 265 148.90 -170.67 REMARK 500 THR A 375 52.44 31.18 REMARK 500 ASP A 377 3.52 102.95 REMARK 500 PRO A 393 47.14 -90.09 REMARK 500 ASN A 412 60.38 60.30 REMARK 500 ASP B 244 -83.94 -53.41 REMARK 500 ASN B 310 77.69 -111.57 REMARK 500 ASP B 377 -179.84 102.64 REMARK 500 LYS B 378 147.03 85.60 REMARK 500 LYS B 380 169.49 165.02 REMARK 500 PRO B 393 38.39 -91.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 DBREF 7OFP A 158 435 UNP P84092 AP2M1_RAT 158 435 DBREF 7OFP B 158 435 UNP P84092 AP2M1_RAT 158 435 SEQADV 7OFP MET A 151 UNP P84092 INITIATING METHIONINE SEQADV 7OFP HIS A 152 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS A 153 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS A 154 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS A 155 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS A 156 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS A 157 UNP P84092 EXPRESSION TAG SEQADV 7OFP MET B 151 UNP P84092 INITIATING METHIONINE SEQADV 7OFP HIS B 152 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS B 153 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS B 154 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS B 155 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS B 156 UNP P84092 EXPRESSION TAG SEQADV 7OFP HIS B 157 UNP P84092 EXPRESSION TAG SEQRES 1 A 285 MET HIS HIS HIS HIS HIS HIS GLN ILE GLY TRP ARG ARG SEQRES 2 A 285 GLU GLY ILE LYS TYR ARG ARG ASN GLU LEU PHE LEU ASP SEQRES 3 A 285 VAL LEU GLU SER VAL ASN LEU LEU MET SER PRO GLN GLY SEQRES 4 A 285 GLN VAL LEU SER ALA HIS VAL SER GLY ARG VAL VAL MET SEQRES 5 A 285 LYS SER TYR LEU SER GLY MET PRO GLU CYS LYS PHE GLY SEQRES 6 A 285 MET ASN ASP LYS ILE VAL ILE GLU LYS GLN GLY LYS GLY SEQRES 7 A 285 THR ALA ASP GLU THR SER LYS SER GLY LYS GLN SER ILE SEQRES 8 A 285 ALA ILE ASP ASP CYS THR PHE HIS GLN CYS VAL ARG LEU SEQRES 9 A 285 SER LYS PHE ASP SER GLU ARG SER ILE SER PHE ILE PRO SEQRES 10 A 285 PRO ASP GLY GLU PHE GLU LEU MET ARG TYR ARG THR THR SEQRES 11 A 285 LYS ASP ILE ILE LEU PRO PHE ARG VAL ILE PRO LEU VAL SEQRES 12 A 285 ARG GLU VAL GLY ARG THR LYS LEU GLU VAL LYS VAL VAL SEQRES 13 A 285 ILE LYS SER ASN PHE LYS PRO SER LEU LEU ALA GLN LYS SEQRES 14 A 285 ILE GLU VAL ARG ILE PRO THR PRO LEU ASN THR SER GLY SEQRES 15 A 285 VAL GLN VAL ILE CYS MET LYS GLY LYS ALA LYS TYR LYS SEQRES 16 A 285 ALA SER GLU ASN ALA ILE VAL TRP LYS ILE LYS ARG MET SEQRES 17 A 285 ALA GLY MET LYS GLU SER GLN ILE SER ALA GLU ILE GLU SEQRES 18 A 285 LEU LEU PRO THR ASN ASP LYS LYS LYS TRP ALA ARG PRO SEQRES 19 A 285 PRO ILE SER MET ASN PHE GLU VAL PRO PHE ALA PRO SER SEQRES 20 A 285 GLY LEU LYS VAL ARG TYR LEU LYS VAL PHE GLU PRO LYS SEQRES 21 A 285 LEU ASN TYR SER ASP HIS ASP VAL ILE LYS TRP VAL ARG SEQRES 22 A 285 TYR ILE GLY ARG SER GLY ILE TYR GLU THR ARG CYS SEQRES 1 B 285 MET HIS HIS HIS HIS HIS HIS GLN ILE GLY TRP ARG ARG SEQRES 2 B 285 GLU GLY ILE LYS TYR ARG ARG ASN GLU LEU PHE LEU ASP SEQRES 3 B 285 VAL LEU GLU SER VAL ASN LEU LEU MET SER PRO GLN GLY SEQRES 4 B 285 GLN VAL LEU SER ALA HIS VAL SER GLY ARG VAL VAL MET SEQRES 5 B 285 LYS SER TYR LEU SER GLY MET PRO GLU CYS LYS PHE GLY SEQRES 6 B 285 MET ASN ASP LYS ILE VAL ILE GLU LYS GLN GLY LYS GLY SEQRES 7 B 285 THR ALA ASP GLU THR SER LYS SER GLY LYS GLN SER ILE SEQRES 8 B 285 ALA ILE ASP ASP CYS THR PHE HIS GLN CYS VAL ARG LEU SEQRES 9 B 285 SER LYS PHE ASP SER GLU ARG SER ILE SER PHE ILE PRO SEQRES 10 B 285 PRO ASP GLY GLU PHE GLU LEU MET ARG TYR ARG THR THR SEQRES 11 B 285 LYS ASP ILE ILE LEU PRO PHE ARG VAL ILE PRO LEU VAL SEQRES 12 B 285 ARG GLU VAL GLY ARG THR LYS LEU GLU VAL LYS VAL VAL SEQRES 13 B 285 ILE LYS SER ASN PHE LYS PRO SER LEU LEU ALA GLN LYS SEQRES 14 B 285 ILE GLU VAL ARG ILE PRO THR PRO LEU ASN THR SER GLY SEQRES 15 B 285 VAL GLN VAL ILE CYS MET LYS GLY LYS ALA LYS TYR LYS SEQRES 16 B 285 ALA SER GLU ASN ALA ILE VAL TRP LYS ILE LYS ARG MET SEQRES 17 B 285 ALA GLY MET LYS GLU SER GLN ILE SER ALA GLU ILE GLU SEQRES 18 B 285 LEU LEU PRO THR ASN ASP LYS LYS LYS TRP ALA ARG PRO SEQRES 19 B 285 PRO ILE SER MET ASN PHE GLU VAL PRO PHE ALA PRO SER SEQRES 20 B 285 GLY LEU LYS VAL ARG TYR LEU LYS VAL PHE GLU PRO LYS SEQRES 21 B 285 LEU ASN TYR SER ASP HIS ASP VAL ILE LYS TRP VAL ARG SEQRES 22 B 285 TYR ILE GLY ARG SER GLY ILE TYR GLU THR ARG CYS HET GOL A 501 14 HET GOL A 502 14 HET GOL A 503 14 HET GOL A 504 13 HET GOL A 505 13 HET GOL A 506 14 HET CIT A 507 18 HET GOL B 501 13 HET GOL B 502 13 HET GOL B 503 14 HETNAM GOL GLYCEROL HETNAM CIT CITRIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 9(C3 H8 O3) FORMUL 9 CIT C6 H8 O7 FORMUL 13 HOH *272(H2 O) HELIX 1 AA1 ALA A 346 GLU A 348 5 3 HELIX 2 AA2 HIS A 416 VAL A 418 5 3 HELIX 3 AA3 ALA B 346 GLU B 348 5 3 HELIX 4 AA4 HIS B 416 VAL B 418 5 3 SHEET 1 AA1 9 ASP A 245 PHE A 248 0 SHEET 2 AA1 9 GLY A 270 THR A 279 -1 O ARG A 276 N THR A 247 SHEET 3 AA1 9 VAL A 191 TYR A 205 -1 N GLY A 198 O TYR A 277 SHEET 4 AA1 9 GLU A 172 MET A 185 -1 N LEU A 178 O ARG A 199 SHEET 5 AA1 9 ILE A 419 THR A 433 1 O ARG A 423 N VAL A 177 SHEET 6 AA1 9 ILE A 386 VAL A 392 -1 N ILE A 386 O THR A 433 SHEET 7 AA1 9 LEU A 316 PRO A 325 -1 N ARG A 323 O SER A 387 SHEET 8 AA1 9 ALA A 350 ALA A 359 -1 O ILE A 351 N ILE A 324 SHEET 9 AA1 9 LYS A 341 LYS A 345 -1 N LYS A 341 O LYS A 354 SHEET 1 AA2 5 ARG A 253 LEU A 254 0 SHEET 2 AA2 5 SER A 262 PHE A 265 -1 O SER A 264 N ARG A 253 SHEET 3 AA2 5 GLU A 211 MET A 216 -1 N CYS A 212 O PHE A 265 SHEET 4 AA2 5 VAL A 401 GLU A 408 -1 O LYS A 405 N LYS A 213 SHEET 5 AA2 5 TYR A 413 SER A 414 -1 O TYR A 413 N GLU A 408 SHEET 1 AA3 4 PHE A 287 VAL A 296 0 SHEET 2 AA3 4 LYS A 300 SER A 309 -1 O VAL A 306 N ILE A 290 SHEET 3 AA3 4 GLU A 363 LEU A 372 -1 O ALA A 368 N VAL A 303 SHEET 4 AA3 4 THR A 330 CYS A 337 -1 N GLY A 332 O GLU A 371 SHEET 1 AA4 9 ASP B 245 PHE B 248 0 SHEET 2 AA4 9 GLY B 270 THR B 279 -1 O ARG B 276 N THR B 247 SHEET 3 AA4 9 VAL B 191 TYR B 205 -1 N MET B 202 O PHE B 272 SHEET 4 AA4 9 GLU B 172 MET B 185 -1 N LEU B 178 O ARG B 199 SHEET 5 AA4 9 ILE B 419 THR B 433 1 O ILE B 425 N VAL B 177 SHEET 6 AA4 9 ILE B 386 VAL B 392 -1 N ILE B 386 O THR B 433 SHEET 7 AA4 9 LEU B 316 PRO B 325 -1 N ARG B 323 O SER B 387 SHEET 8 AA4 9 ALA B 350 ALA B 359 -1 O ILE B 351 N ILE B 324 SHEET 9 AA4 9 LYS B 341 LYS B 345 -1 N LYS B 343 O VAL B 352 SHEET 1 AA5 5 ARG B 253 LEU B 254 0 SHEET 2 AA5 5 SER B 262 PHE B 265 -1 O SER B 264 N ARG B 253 SHEET 3 AA5 5 GLU B 211 MET B 216 -1 N CYS B 212 O PHE B 265 SHEET 4 AA5 5 VAL B 401 GLU B 408 -1 O LYS B 405 N LYS B 213 SHEET 5 AA5 5 TYR B 413 SER B 414 -1 O TYR B 413 N GLU B 408 SHEET 1 AA6 4 PHE B 287 VAL B 296 0 SHEET 2 AA6 4 LYS B 300 SER B 309 -1 O VAL B 306 N ILE B 290 SHEET 3 AA6 4 GLU B 363 LEU B 372 -1 O ILE B 370 N LEU B 301 SHEET 4 AA6 4 THR B 330 CYS B 337 -1 N GLY B 332 O GLU B 371 SITE 1 AC1 3 THR A 326 TRP A 381 SER B 314 SITE 1 AC2 4 PRO A 385 SER A 387 HOH A 601 SER B 314 SITE 1 AC3 3 VAL A 191 THR A 280 ILE A 283 SITE 1 AC4 3 PHE A 311 LYS A 312 PHE A 394 SITE 1 AC5 2 LYS A 339 ALA A 359 SITE 1 AC6 9 LYS A 213 LYS A 405 PHE A 407 HOH A 602 SITE 2 AC6 9 HOH A 605 HOH A 614 HOH A 627 LYS B 405 SITE 3 AC6 9 HOH B 611 SITE 1 AC7 6 LYS A 345 GLU A 348 HOH A 607 HOH A 622 SITE 2 AC7 6 LYS B 339 ARG B 357 SITE 1 AC8 6 ILE B 284 PHE B 311 LYS B 312 PHE B 394 SITE 2 AC8 6 LYS B 400 HOH B 613 SITE 1 AC9 1 ARG B 170 SITE 1 AD1 9 ARG A 423 ASN B 182 LEU B 183 SER B 193 SITE 2 AD1 9 ALA B 194 HIS B 195 ILE B 430 HOH B 616 SITE 3 AD1 9 HOH B 620 CRYST1 123.830 123.830 112.668 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008076 0.004662 0.000000 0.00000 SCALE2 0.000000 0.009325 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008876 0.00000