HEADER PROTEIN BINDING 12-MAY-21 7OIO TITLE SOLUTION STRUCTURE OF LEGIONELLA PNEUMOPHILA LSPC COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL SECRETION PATHWAY PROTEIN C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GENERAL SECRETION PATHWAY PROTEIN GSPC,TYPE II SECRETION COMPND 5 SYSTEM PROTEIN C; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: C3926_04815, DI026_10925, DIZ50_00195, ERS253249_00073, SOURCE 5 NCTC12000_01052; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LEGIONELLA PNEUMOPHILA, TYPE II SECRETION SYSTEM, INNER MEMBRANE KEYWDS 2 PLATFORM, LSPC, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR T.J.PORTLOCK,J.A.GARNETT REVDAT 3 19-JUN-24 7OIO 1 REMARK REVDAT 2 14-JUN-23 7OIO 1 REMARK REVDAT 1 01-JUN-22 7OIO 0 JRNL AUTH T.J.PORTLOCK,J.A.GARNETT JRNL TITL SOLUTION STRUCTURE OF LEGIONELLA PNEUMOPHILA LSPC JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, ARIA REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), LINGE, O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OIO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292114842. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 MM NACL, 50 MM SODIUM REMARK 210 PHOSPHATE, 50 MM SODIUM CHLORIDE REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.4 MM [U-99% 13C; U-99% 15N] REMARK 210 LSPC-PER, 50 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 3D HCCH-TOCSY; 3D CCH- REMARK 210 TOCSY; 3D HNCA; 3D HN(CO)CA; 3D REMARK 210 HNCACB; 3D 1H-13C NOESY; 3D 1H- REMARK 210 15N NOESY; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 48 76.93 -119.52 REMARK 500 1 LYS A 52 -64.32 -92.70 REMARK 500 1 ALA A 55 64.13 -112.43 REMARK 500 1 PHE A 66 72.73 54.59 REMARK 500 1 LEU A 70 -64.54 67.68 REMARK 500 1 ASN A 83 86.68 61.22 REMARK 500 1 GLN A 86 -173.12 66.01 REMARK 500 1 VAL A 162 -55.72 73.65 REMARK 500 2 VAL A 48 77.47 62.65 REMARK 500 2 ASN A 50 81.33 57.11 REMARK 500 2 LYS A 52 78.77 -107.24 REMARK 500 2 LEU A 70 -84.06 62.92 REMARK 500 2 PHE A 71 -51.34 -149.19 REMARK 500 2 ALA A 99 -167.99 -129.72 REMARK 500 2 ASP A 156 57.33 -143.25 REMARK 500 2 LEU A 157 -29.63 71.72 REMARK 500 2 THR A 158 -156.13 -84.08 REMARK 500 2 ALA A 163 -38.45 -154.83 REMARK 500 3 HIS A 31 87.68 69.27 REMARK 500 3 HIS A 32 -53.67 -179.24 REMARK 500 3 HIS A 33 -29.60 -140.43 REMARK 500 3 ALA A 45 -58.02 71.68 REMARK 500 3 VAL A 48 -172.31 50.88 REMARK 500 3 SER A 49 75.10 58.79 REMARK 500 3 LYS A 52 70.58 59.87 REMARK 500 3 LEU A 70 -69.78 69.71 REMARK 500 3 LEU A 79 82.02 56.40 REMARK 500 3 GLU A 81 61.09 62.95 REMARK 500 3 LYS A 85 60.89 60.35 REMARK 500 3 ALA A 99 -161.61 -106.86 REMARK 500 3 ASN A 155 44.35 -102.93 REMARK 500 3 LEU A 157 -69.58 -142.97 REMARK 500 3 ALA A 163 -44.13 72.63 REMARK 500 3 LYS A 167 -68.67 -130.33 REMARK 500 3 GLU A 168 79.25 -158.98 REMARK 500 4 ALA A 45 34.37 -83.00 REMARK 500 4 VAL A 48 57.04 -94.25 REMARK 500 4 ALA A 55 -28.42 -163.40 REMARK 500 4 VAL A 73 -47.99 -138.70 REMARK 500 4 ASN A 80 84.60 59.81 REMARK 500 4 ASP A 82 -75.90 -103.35 REMARK 500 4 ALA A 99 -157.67 -125.46 REMARK 500 4 PRO A 153 81.69 -66.41 REMARK 500 4 ALA A 163 -79.32 -134.27 REMARK 500 5 ALA A 27 71.43 -110.73 REMARK 500 5 ASP A 35 72.86 54.48 REMARK 500 5 ASP A 37 -8.08 -147.03 REMARK 500 5 THR A 41 80.36 60.14 REMARK 500 5 ASN A 50 61.44 -117.18 REMARK 500 5 THR A 51 124.29 71.26 REMARK 500 REMARK 500 THIS ENTRY HAS 110 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34627 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF LEGIONELLA PNEUMOPHILA LSPC DBREF1 7OIO A 41 169 UNP A0A130PW51_LEGPN DBREF2 7OIO A A0A130PW51 41 169 SEQADV 7OIO MET A 26 UNP A0A130PW5 INITIATING METHIONINE SEQADV 7OIO ALA A 27 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 28 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 29 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 30 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 31 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 32 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO HIS A 33 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO VAL A 34 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO ASP A 35 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO ASP A 36 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO ASP A 37 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO ASP A 38 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO LYS A 39 UNP A0A130PW5 EXPRESSION TAG SEQADV 7OIO MET A 40 UNP A0A130PW5 EXPRESSION TAG SEQRES 1 A 144 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 144 LYS MET THR TYR VAL ARG ALA ILE PRO VAL SER ASN THR SEQRES 3 A 144 LYS SER ILE ALA GLY MET ARG GLU GLU ASN LEU ASN TYR SEQRES 4 A 144 ILE PHE ASN THR SER LEU PHE GLY VAL TYR VAL PRO ALA SEQRES 5 A 144 ASP LEU ASN GLU ASP ASN VAL LYS GLN SER MET LEU ASN SEQRES 6 A 144 VAL THR LEU VAL GLY ILE LEU PHE ALA ASP LYS ILE GLU SEQRES 7 A 144 GLU SER GLN VAL ILE ILE ARG SER ALA SER GLY GLU GLU SEQRES 8 A 144 LYS THR TYR ASN VAL GLY ASP LYS ILE PRO GLY GLY ALA SEQRES 9 A 144 THR ILE LYS ARG ILE MET PRO GLY GLY VAL LEU VAL GLU SEQRES 10 A 144 ARG ASP GLY THR LEU GLU SER LEU SER LEU PRO LYS ASN SEQRES 11 A 144 ASP LEU THR PHE GLU PRO VAL ALA LYS PRO LEU LYS GLU SEQRES 12 A 144 GLU HELIX 1 AA1 ASP A 37 THR A 41 5 5 HELIX 2 AA2 ARG A 58 ILE A 65 1 8 SHEET 1 AA1 3 VAL A 91 LEU A 97 0 SHEET 2 AA1 3 GLN A 106 SER A 111 -1 O ARG A 110 N THR A 92 SHEET 3 AA1 3 GLU A 116 ASN A 120 -1 O TYR A 119 N VAL A 107 SHEET 1 AA2 3 LYS A 124 ILE A 125 0 SHEET 2 AA2 3 ALA A 129 MET A 135 -1 O ALA A 129 N ILE A 125 SHEET 3 AA2 3 GLY A 138 ARG A 143 -1 O LEU A 140 N ARG A 133 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MASTER 159 0 0 2 6 0 0 6 1122 1 0 12 END