HEADER TRANSFERASE 17-MAY-21 7OJW TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LPXA IN COMPLEX WITH TITLE 2 COMPOUND 93 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-[ACYL-CARRIER-PROTEIN]-UDP-N-ACETYLGLUCOSAMINE O- COMPND 3 ACYLTRANSFERASE; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: FULL-LENGTH PROTEIN; COMPND 6 SYNONYM: UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE; COMPND 7 EC: 2.3.1.129; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN PA7); SOURCE 3 ORGANISM_TAXID: 381754; SOURCE 4 STRAIN: PA7; SOURCE 5 GENE: LPXA, PSPA7_1495; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS ACYLTRANSFERASE, FATTY ACIDS, LIPID A, LEFT-HANDED PARALLEL BETA- KEYWDS 2 HELIX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.D.RYAN,A.L.PARKES,M.SOUTHEY,O.A.ANDERSEN,M.ZAHN,J.BARKER, AUTHOR 2 B.L.M.DEJONGE REVDAT 3 31-JAN-24 7OJW 1 REMARK REVDAT 2 27-OCT-21 7OJW 1 JRNL REVDAT 1 13-OCT-21 7OJW 0 JRNL AUTH M.D.RYAN,A.L.PARKES,D.CORBETT,A.P.DICKIE,M.SOUTHEY, JRNL AUTH 2 O.A.ANDERSEN,D.B.STEIN,O.R.BARBEAU,A.SANZONE,P.THOMMES, JRNL AUTH 3 J.BARKER,R.CAIN,C.COMPPER,M.DEJOB,A.DORALI,D.ETHERIDGE, JRNL AUTH 4 S.EVANS,A.FAULKNER,E.GADOULEAU,T.GORMAN,D.HAASE, JRNL AUTH 5 M.HOLBROW-WILSHAW,T.KRULLE,X.LI,C.LUMLEY,B.MERTINS,S.NAPIER, JRNL AUTH 6 R.ODEDRA,K.PAPADOPOULOS,V.ROUMPELAKIS,K.SPEAR,E.TRIMBY, JRNL AUTH 7 J.WILLIAMS,M.ZAHN,A.D.KEEFE,Y.ZHANG,H.T.SOUTTER, JRNL AUTH 8 P.A.CENTRELLA,M.A.CLARK,J.W.CUOZZO,C.E.DUMELIN,B.DENG, JRNL AUTH 9 A.HUNT,E.A.SIGEL,D.M.TROAST,B.L.M.DEJONGE JRNL TITL DISCOVERY OF NOVEL UDP- N -ACETYLGLUCOSAMINE ACYLTRANSFERASE JRNL TITL 2 (LPXA) INHIBITORS WITH ACTIVITY AGAINST PSEUDOMONAS JRNL TITL 3 AERUGINOSA . JRNL REF J.MED.CHEM. V. 64 14377 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34569791 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00888 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 143037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 7026 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.73 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2861 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2714 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2714 REMARK 3 BIN R VALUE (WORKING SET) : 0.2714 REMARK 3 BIN FREE R VALUE : 0.2702 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.14 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5874 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 497 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.28550 REMARK 3 B22 (A**2) : 7.28550 REMARK 3 B33 (A**2) : -14.57100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.074 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.072 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.074 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.072 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6136 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8322 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2082 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1092 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6136 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 803 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7593 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.72 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.39 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -24.4611 -1.2294 5.1903 REMARK 3 T TENSOR REMARK 3 T11: -0.1049 T22: -0.0755 REMARK 3 T33: -0.0091 T12: 0.0018 REMARK 3 T13: -0.0412 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 1.0195 L22: 1.5357 REMARK 3 L33: 0.7717 L12: 0.2192 REMARK 3 L13: 0.0331 L23: -0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0707 S13: 0.0083 REMARK 3 S21: -0.0402 S22: 0.0291 S23: -0.2920 REMARK 3 S31: -0.0432 S32: 0.0895 S33: -0.0223 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -52.0023 13.2513 8.0017 REMARK 3 T TENSOR REMARK 3 T11: -0.0610 T22: -0.0931 REMARK 3 T33: -0.0444 T12: 0.0255 REMARK 3 T13: -0.0429 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 0.9959 L22: 1.7244 REMARK 3 L33: 1.0273 L12: -0.1086 REMARK 3 L13: 0.0016 L23: -0.6179 REMARK 3 S TENSOR REMARK 3 S11: -0.0146 S12: -0.0248 S13: 0.1943 REMARK 3 S21: 0.1595 S22: 0.0216 S23: 0.0496 REMARK 3 S31: -0.2104 S32: -0.0829 S33: -0.0070 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -47.0108 -6.8583 -15.4204 REMARK 3 T TENSOR REMARK 3 T11: -0.0977 T22: -0.0210 REMARK 3 T33: -0.1317 T12: 0.0108 REMARK 3 T13: -0.0357 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 1.4545 L22: 1.7787 REMARK 3 L33: 0.8347 L12: 0.5482 REMARK 3 L13: -0.1445 L23: -0.2470 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: 0.3726 S13: -0.0039 REMARK 3 S21: -0.3044 S22: 0.0275 S23: -0.0658 REMARK 3 S31: -0.0424 S32: -0.0072 S33: 0.0612 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292115876. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 143052 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 59.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5DEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M NH4CL, 0.1 M NA ACETATE PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 83.67000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 83.67000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.02500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 83.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.51250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 83.67000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.53750 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 83.67000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 83.67000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.02500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 83.67000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 73.53750 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 83.67000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 24.51250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ASP A 70 REMARK 465 LEU A 71 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 ASP B 70 REMARK 465 LEU B 71 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 ASP C 70 REMARK 465 LEU C 71 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 133 131.55 -36.36 REMARK 500 TYR A 158 -4.11 74.22 REMARK 500 HIS A 164 15.95 59.85 REMARK 500 TYR A 180 -11.66 69.70 REMARK 500 SER A 192 -153.23 -160.46 REMARK 500 ASN B 133 133.04 -36.10 REMARK 500 TYR B 158 -2.32 73.92 REMARK 500 TYR B 180 -12.43 70.80 REMARK 500 SER B 192 -156.05 -161.44 REMARK 500 ASN C 133 131.89 -33.11 REMARK 500 TYR C 158 -1.52 73.50 REMARK 500 TYR C 180 -9.32 69.45 REMARK 500 SER C 192 -159.76 -159.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VFW A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VFW B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VFW C 301 DBREF 7OJW A 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 DBREF 7OJW B 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 DBREF 7OJW C 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 SEQADV 7OJW GLY A -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW SER A -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW HIS A 0 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW GLY B -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW SER B -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW HIS B 0 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW GLY C -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW SER C -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJW HIS C 0 UNP A6V1E4 EXPRESSION TAG SEQRES 1 A 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 A 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 A 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 A 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 A 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 A 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 A 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 A 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 A 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 A 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 A 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 A 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 A 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 A 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 A 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 A 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 A 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 A 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 A 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 A 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 A 261 ARG SEQRES 1 B 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 B 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 B 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 B 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 B 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 B 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 B 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 B 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 B 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 B 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 B 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 B 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 B 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 B 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 B 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 B 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 B 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 B 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 B 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 B 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 B 261 ARG SEQRES 1 C 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 C 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 C 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 C 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 C 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 C 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 C 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 C 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 C 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 C 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 C 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 C 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 C 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 C 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 C 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 C 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 C 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 C 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 C 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 C 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 C 261 ARG HET VFW A 301 30 HET VFW B 301 30 HET VFW C 301 30 HETNAM VFW 2-[2-(2-ETHYLPHENOXY)ETHANOYL-[[4-(1,2,4-TRIAZOL-1-YL) HETNAM 2 VFW PHENYL]METHYL]AMINO]-~{N}-METHYL-ETHANAMIDE FORMUL 4 VFW 3(C22 H25 N5 O3) FORMUL 7 HOH *497(H2 O) HELIX 1 AA1 ASN A 194 ARG A 201 1 8 HELIX 2 AA2 SER A 204 ARG A 220 1 17 HELIX 3 AA3 THR A 224 PHE A 239 1 16 HELIX 4 AA4 PHE A 239 SER A 251 1 13 HELIX 5 AA5 ASN B 194 ARG B 201 1 8 HELIX 6 AA6 SER B 204 ARG B 220 1 17 HELIX 7 AA7 THR B 224 PHE B 239 1 16 HELIX 8 AA8 PHE B 239 SER B 251 1 13 HELIX 9 AA9 ASN C 194 ARG C 201 1 8 HELIX 10 AB1 SER C 204 ARG C 220 1 17 HELIX 11 AB2 THR C 224 PHE C 239 1 16 HELIX 12 AB3 PHE C 239 SER C 251 1 13 SHEET 1 AA1 9 ILE A 9 ILE A 10 0 SHEET 2 AA1 9 ILE A 27 VAL A 28 1 O VAL A 28 N ILE A 9 SHEET 3 AA1 9 VAL A 45 LEU A 46 1 O LEU A 46 N ILE A 27 SHEET 4 AA1 9 SER A 63 GLU A 66 1 O VAL A 64 N VAL A 45 SHEET 5 AA1 9 THR A 93 HIS A 95 1 O ILE A 94 N GLY A 65 SHEET 6 AA1 9 HIS A 118 ILE A 119 1 O ILE A 119 N THR A 93 SHEET 7 AA1 9 ALA A 136 LEU A 137 1 O LEU A 137 N HIS A 118 SHEET 8 AA1 9 LEU A 154 VAL A 155 1 O VAL A 155 N ALA A 136 SHEET 9 AA1 9 ALA A 172 ILE A 173 1 O ILE A 173 N LEU A 154 SHEET 1 AA2 5 ARG A 15 LEU A 16 0 SHEET 2 AA2 5 VAL A 32 ILE A 34 1 O ILE A 34 N ARG A 15 SHEET 3 AA2 5 THR A 50 ILE A 52 1 O ILE A 52 N GLU A 33 SHEET 4 AA2 5 THR A 78 ILE A 82 1 O ILE A 82 N LYS A 51 SHEET 5 AA2 5 GLY A 97 THR A 98 -1 O GLY A 97 N ARG A 79 SHEET 1 AA3 8 ARG A 15 LEU A 16 0 SHEET 2 AA3 8 VAL A 32 ILE A 34 1 O ILE A 34 N ARG A 15 SHEET 3 AA3 8 THR A 50 ILE A 52 1 O ILE A 52 N GLU A 33 SHEET 4 AA3 8 THR A 78 ILE A 82 1 O ILE A 82 N LYS A 51 SHEET 5 AA3 8 THR A 105 ILE A 107 1 O ILE A 107 N VAL A 81 SHEET 6 AA3 8 VAL A 124 ILE A 125 1 O ILE A 125 N THR A 106 SHEET 7 AA3 8 HIS A 142 VAL A 143 1 O VAL A 143 N VAL A 124 SHEET 8 AA3 8 ARG A 160 ILE A 161 1 O ILE A 161 N HIS A 142 SHEET 1 AA410 GLN A 21 VAL A 22 0 SHEET 2 AA410 VAL A 39 ILE A 40 1 O ILE A 40 N GLN A 21 SHEET 3 AA410 ARG A 57 ILE A 58 1 O ILE A 58 N VAL A 39 SHEET 4 AA410 VAL A 87 ILE A 88 1 O ILE A 88 N ARG A 57 SHEET 5 AA410 LEU A 112 ILE A 113 1 O ILE A 113 N VAL A 87 SHEET 6 AA410 ILE A 130 LEU A 131 1 O LEU A 131 N LEU A 112 SHEET 7 AA410 ILE A 148 LEU A 149 1 O LEU A 149 N ILE A 130 SHEET 8 AA410 PHE A 166 SER A 167 1 O SER A 167 N ILE A 148 SHEET 9 AA410 VAL A 181 PHE A 184 1 O VAL A 181 N PHE A 166 SHEET 10 AA410 GLU A 189 MET A 193 -1 O ARG A 191 N THR A 182 SHEET 1 AA5 9 ILE B 9 ILE B 10 0 SHEET 2 AA5 9 ILE B 27 VAL B 28 1 O VAL B 28 N ILE B 9 SHEET 3 AA5 9 VAL B 45 LEU B 46 1 O LEU B 46 N ILE B 27 SHEET 4 AA5 9 SER B 63 GLU B 66 1 O VAL B 64 N VAL B 45 SHEET 5 AA5 9 THR B 93 HIS B 95 1 O ILE B 94 N GLY B 65 SHEET 6 AA5 9 HIS B 118 ILE B 119 1 O ILE B 119 N THR B 93 SHEET 7 AA5 9 ALA B 136 LEU B 137 1 O LEU B 137 N HIS B 118 SHEET 8 AA5 9 LEU B 154 VAL B 155 1 O VAL B 155 N ALA B 136 SHEET 9 AA5 9 ALA B 172 ILE B 173 1 O ILE B 173 N LEU B 154 SHEET 1 AA6 5 ARG B 15 LEU B 16 0 SHEET 2 AA6 5 VAL B 32 ILE B 34 1 O ILE B 34 N ARG B 15 SHEET 3 AA6 5 THR B 50 ILE B 52 1 O ILE B 52 N GLU B 33 SHEET 4 AA6 5 THR B 78 ILE B 82 1 O ILE B 82 N LYS B 51 SHEET 5 AA6 5 GLY B 97 THR B 98 -1 O GLY B 97 N ARG B 79 SHEET 1 AA7 8 ARG B 15 LEU B 16 0 SHEET 2 AA7 8 VAL B 32 ILE B 34 1 O ILE B 34 N ARG B 15 SHEET 3 AA7 8 THR B 50 ILE B 52 1 O ILE B 52 N GLU B 33 SHEET 4 AA7 8 THR B 78 ILE B 82 1 O ILE B 82 N LYS B 51 SHEET 5 AA7 8 THR B 105 ILE B 107 1 O ILE B 107 N VAL B 81 SHEET 6 AA7 8 VAL B 124 ILE B 125 1 O ILE B 125 N THR B 106 SHEET 7 AA7 8 HIS B 142 VAL B 143 1 O VAL B 143 N VAL B 124 SHEET 8 AA7 8 ARG B 160 ILE B 161 1 O ILE B 161 N HIS B 142 SHEET 1 AA810 GLN B 21 VAL B 22 0 SHEET 2 AA810 VAL B 39 ILE B 40 1 O ILE B 40 N GLN B 21 SHEET 3 AA810 ARG B 57 ILE B 58 1 O ILE B 58 N VAL B 39 SHEET 4 AA810 VAL B 87 ILE B 88 1 O ILE B 88 N ARG B 57 SHEET 5 AA810 LEU B 112 ILE B 113 1 O ILE B 113 N VAL B 87 SHEET 6 AA810 ILE B 130 LEU B 131 1 O LEU B 131 N LEU B 112 SHEET 7 AA810 ILE B 148 LEU B 149 1 O LEU B 149 N ILE B 130 SHEET 8 AA810 PHE B 166 SER B 167 1 O SER B 167 N ILE B 148 SHEET 9 AA810 VAL B 181 PHE B 184 1 O VAL B 183 N PHE B 166 SHEET 10 AA810 GLU B 189 MET B 193 -1 O ARG B 191 N THR B 182 SHEET 1 AA9 9 ILE C 9 ILE C 10 0 SHEET 2 AA9 9 ILE C 27 VAL C 28 1 O VAL C 28 N ILE C 9 SHEET 3 AA9 9 VAL C 45 LEU C 46 1 O LEU C 46 N ILE C 27 SHEET 4 AA9 9 SER C 63 GLU C 66 1 O VAL C 64 N VAL C 45 SHEET 5 AA9 9 THR C 93 HIS C 95 1 O ILE C 94 N GLY C 65 SHEET 6 AA9 9 HIS C 118 ILE C 119 1 O ILE C 119 N THR C 93 SHEET 7 AA9 9 ALA C 136 LEU C 137 1 O LEU C 137 N HIS C 118 SHEET 8 AA9 9 LEU C 154 VAL C 155 1 O VAL C 155 N ALA C 136 SHEET 9 AA9 9 ALA C 172 ILE C 173 1 O ILE C 173 N LEU C 154 SHEET 1 AB1 5 ARG C 15 LEU C 16 0 SHEET 2 AB1 5 VAL C 32 ILE C 34 1 O ILE C 34 N ARG C 15 SHEET 3 AB1 5 THR C 50 ILE C 52 1 O ILE C 52 N GLU C 33 SHEET 4 AB1 5 THR C 78 ILE C 82 1 O ILE C 82 N LYS C 51 SHEET 5 AB1 5 GLY C 97 THR C 98 -1 O GLY C 97 N ARG C 79 SHEET 1 AB2 8 ARG C 15 LEU C 16 0 SHEET 2 AB2 8 VAL C 32 ILE C 34 1 O ILE C 34 N ARG C 15 SHEET 3 AB2 8 THR C 50 ILE C 52 1 O ILE C 52 N GLU C 33 SHEET 4 AB2 8 THR C 78 ILE C 82 1 O ILE C 82 N LYS C 51 SHEET 5 AB2 8 THR C 105 ILE C 107 1 O ILE C 107 N VAL C 81 SHEET 6 AB2 8 VAL C 124 ILE C 125 1 O ILE C 125 N THR C 106 SHEET 7 AB2 8 HIS C 142 VAL C 143 1 O VAL C 143 N VAL C 124 SHEET 8 AB2 8 ARG C 160 ILE C 161 1 O ILE C 161 N HIS C 142 SHEET 1 AB310 GLN C 21 VAL C 22 0 SHEET 2 AB310 VAL C 39 ILE C 40 1 O ILE C 40 N GLN C 21 SHEET 3 AB310 ARG C 57 ILE C 58 1 O ILE C 58 N VAL C 39 SHEET 4 AB310 VAL C 87 ILE C 88 1 O ILE C 88 N ARG C 57 SHEET 5 AB310 LEU C 112 ILE C 113 1 O ILE C 113 N VAL C 87 SHEET 6 AB310 ILE C 130 LEU C 131 1 O LEU C 131 N LEU C 112 SHEET 7 AB310 ILE C 148 LEU C 149 1 O LEU C 149 N ILE C 130 SHEET 8 AB310 PHE C 166 SER C 167 1 O SER C 167 N ILE C 148 SHEET 9 AB310 VAL C 181 PHE C 184 1 O VAL C 183 N PHE C 166 SHEET 10 AB310 GLU C 189 MET C 193 -1 O ARG C 191 N THR C 182 CISPEP 1 GLY A 48 PRO A 49 0 4.03 CISPEP 2 ASN A 186 PRO A 187 0 -0.21 CISPEP 3 GLY B 48 PRO B 49 0 2.02 CISPEP 4 ASN B 186 PRO B 187 0 0.99 CISPEP 5 GLY C 48 PRO C 49 0 5.61 CISPEP 6 ASN C 186 PRO C 187 0 0.05 SITE 1 AC1 12 LEU A 112 ILE A 130 VAL A 132 ASN A 133 SITE 2 AC1 12 SER A 150 GLY A 151 HOH A 419 HOH A 482 SITE 3 AC1 12 ALA B 136 ALA B 138 VAL B 155 GLN B 157 SITE 1 AC2 13 LEU B 112 ILE B 130 VAL B 132 ASN B 133 SITE 2 AC2 13 SER B 150 GLY B 151 HOH B 417 HOH B 450 SITE 3 AC2 13 HOH B 465 ALA C 136 ALA C 138 VAL C 155 SITE 4 AC2 13 GLN C 157 SITE 1 AC3 10 ALA A 136 ALA A 138 GLN A 157 LEU C 112 SITE 2 AC3 10 ILE C 130 VAL C 132 ASN C 133 SER C 150 SITE 3 AC3 10 GLY C 151 HOH C 415 CRYST1 167.340 167.340 98.050 90.00 90.00 90.00 I 41 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005976 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005976 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010199 0.00000