HEADER REPLICATION 21-MAY-21 7OMB TITLE CRYSTAL STRUCTURE OF KOD DNA POLYMERASE IN A TERNARY COMPLEX WITH A TITLE 2 P/T DUPLEX CONTAINING AN EXTENDED 5' SINGLE STRANDED TEMPLATE TITLE 3 OVERHANG COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.7; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TEMPLATE; COMPND 9 CHAIN: T; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: PRIMER; COMPND 13 CHAIN: P; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS KOD1; SOURCE 3 ORGANISM_TAXID: 69014; SOURCE 4 GENE: POL, TK0001; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS TERNARY COMPLEX, DNA POLYMERASE, REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR K.BETZ,H.M.KROPP,K.DIEDERICHS,A.MARX REVDAT 4 31-JAN-24 7OMB 1 REMARK REVDAT 3 16-FEB-22 7OMB 1 COMPND REVDAT 2 17-NOV-21 7OMB 1 JRNL REVDAT 1 13-OCT-21 7OMB 0 JRNL AUTH H.M.KROPP,S.LUDMANN,K.DIEDERICHS,K.BETZ,A.MARX JRNL TITL STRUCTURAL BASIS FOR THE RECOGNITION OF DEAMINATED JRNL TITL 2 NUCLEOBASES BY AN ARCHAEAL DNA POLYMERASE. JRNL REF CHEMBIOCHEM V. 22 3060 2021 JRNL REFN ESSN 1439-7633 JRNL PMID 34486208 JRNL DOI 10.1002/CBIC.202100306 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4085 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 144284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 6950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2800 - 6.2300 0.99 4633 256 0.1694 0.1811 REMARK 3 2 6.2200 - 4.9400 1.00 4662 241 0.1633 0.2123 REMARK 3 3 4.9400 - 4.3200 1.00 4686 223 0.1351 0.1621 REMARK 3 4 4.3200 - 3.9200 1.00 4659 224 0.1454 0.1625 REMARK 3 5 3.9200 - 3.6400 0.99 4687 234 0.1552 0.1944 REMARK 3 6 3.6400 - 3.4300 1.00 4622 253 0.1731 0.2363 REMARK 3 7 3.4300 - 3.2600 1.00 4624 236 0.1785 0.2074 REMARK 3 8 3.2600 - 3.1200 1.00 4701 249 0.1807 0.2110 REMARK 3 9 3.1200 - 3.0000 1.00 4682 214 0.1920 0.2540 REMARK 3 10 3.0000 - 2.8900 1.00 4680 230 0.1963 0.2643 REMARK 3 11 2.8900 - 2.8000 1.00 4675 237 0.2228 0.2606 REMARK 3 12 2.8000 - 2.7200 1.00 4651 230 0.2207 0.2663 REMARK 3 13 2.7200 - 2.6500 0.99 4630 246 0.2305 0.2741 REMARK 3 14 2.6500 - 2.5900 0.99 4647 229 0.2292 0.3115 REMARK 3 15 2.5900 - 2.5300 1.00 4706 232 0.2375 0.2625 REMARK 3 16 2.5300 - 2.4700 1.00 4592 267 0.2395 0.3120 REMARK 3 17 2.4700 - 2.4200 1.00 4662 243 0.2504 0.2768 REMARK 3 18 2.4200 - 2.3800 1.00 4663 220 0.2631 0.2943 REMARK 3 19 2.3800 - 2.3300 1.00 4703 219 0.2677 0.2967 REMARK 3 20 2.3300 - 2.3000 1.00 4658 207 0.2863 0.3340 REMARK 3 21 2.3000 - 2.2600 1.00 4680 254 0.2850 0.3317 REMARK 3 22 2.2600 - 2.2200 1.00 4642 244 0.3064 0.3255 REMARK 3 23 2.2200 - 2.1900 1.00 4714 220 0.3111 0.3350 REMARK 3 24 2.1900 - 2.1600 1.00 4597 236 0.3198 0.3568 REMARK 3 25 2.1600 - 2.1300 1.00 4691 211 0.3283 0.3866 REMARK 3 26 2.1300 - 2.1000 1.00 4661 235 0.3416 0.3662 REMARK 3 27 2.1000 - 2.0800 0.98 4607 255 0.3589 0.3552 REMARK 3 28 2.0800 - 2.0500 0.93 4325 218 0.3730 0.4003 REMARK 3 29 2.0500 - 2.0300 0.87 4072 219 0.3798 0.3825 REMARK 3 30 2.0300 - 2.0100 0.66 3122 168 0.4044 0.3909 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.341 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.843 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 7178 REMARK 3 ANGLE : 1.279 9825 REMARK 3 CHIRALITY : 0.065 1054 REMARK 3 PLANARITY : 0.009 1155 REMARK 3 DIHEDRAL : 17.002 2812 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5193 39.9140 -7.0596 REMARK 3 T TENSOR REMARK 3 T11: 0.2407 T22: 0.2648 REMARK 3 T33: 0.2894 T12: -0.0111 REMARK 3 T13: -0.0478 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 2.0909 L22: 0.6144 REMARK 3 L33: 2.1502 L12: -0.0263 REMARK 3 L13: -1.1345 L23: 0.3828 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: -0.0385 S13: 0.1895 REMARK 3 S21: -0.0066 S22: 0.0338 S23: 0.0069 REMARK 3 S31: -0.0163 S32: 0.0871 S33: -0.0927 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9936 28.1653 -23.6896 REMARK 3 T TENSOR REMARK 3 T11: 0.3355 T22: 0.3466 REMARK 3 T33: 0.3161 T12: -0.0113 REMARK 3 T13: -0.0037 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 5.4078 L22: 2.3950 REMARK 3 L33: 2.0858 L12: 0.1114 REMARK 3 L13: 0.1790 L23: 0.8595 REMARK 3 S TENSOR REMARK 3 S11: 0.0658 S12: 0.3456 S13: -0.6662 REMARK 3 S21: -0.0453 S22: -0.0188 S23: 0.0893 REMARK 3 S31: 0.2432 S32: 0.0386 S33: -0.0381 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 552 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9271 24.8201 -16.3024 REMARK 3 T TENSOR REMARK 3 T11: 0.2310 T22: 0.2606 REMARK 3 T33: 0.2443 T12: 0.0200 REMARK 3 T13: -0.0092 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.4558 L22: 0.5376 REMARK 3 L33: 0.4137 L12: 0.3625 REMARK 3 L13: 0.3276 L23: 0.0919 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: 0.1335 S13: -0.0119 REMARK 3 S21: -0.0413 S22: 0.0252 S23: 0.0432 REMARK 3 S31: 0.0191 S32: 0.0135 S33: 0.0177 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 553 THROUGH 756 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1770 3.6373 -30.4717 REMARK 3 T TENSOR REMARK 3 T11: 0.3584 T22: 0.3656 REMARK 3 T33: 0.4526 T12: 0.0011 REMARK 3 T13: 0.0441 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 3.2480 L22: 1.1407 REMARK 3 L33: 0.9549 L12: -1.0629 REMARK 3 L13: 0.2235 L23: -0.0160 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: 0.3723 S13: -0.2596 REMARK 3 S21: -0.1711 S22: -0.0703 S23: -0.1714 REMARK 3 S31: 0.1416 S32: 0.2076 S33: -0.0004 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'T' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2619 30.7191 -1.9762 REMARK 3 T TENSOR REMARK 3 T11: 0.6151 T22: 0.6652 REMARK 3 T33: 0.8183 T12: 0.1055 REMARK 3 T13: -0.0454 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 8.5532 L22: 1.8366 REMARK 3 L33: 6.0254 L12: 3.3909 REMARK 3 L13: 3.9240 L23: 2.3428 REMARK 3 S TENSOR REMARK 3 S11: 0.8576 S12: -0.3737 S13: -1.7631 REMARK 3 S21: 0.2958 S22: -0.2057 S23: -0.7664 REMARK 3 S31: 1.1389 S32: 0.6989 S33: -0.7062 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'T' AND (RESID 6 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9502 4.3865 -12.3513 REMARK 3 T TENSOR REMARK 3 T11: 0.3314 T22: 0.3718 REMARK 3 T33: 0.3389 T12: 0.0295 REMARK 3 T13: -0.0312 T23: 0.1337 REMARK 3 L TENSOR REMARK 3 L11: 2.7559 L22: 9.2019 REMARK 3 L33: 0.4057 L12: -0.2400 REMARK 3 L13: -0.8631 L23: 1.0777 REMARK 3 S TENSOR REMARK 3 S11: 0.0984 S12: -0.1770 S13: -0.4647 REMARK 3 S21: 0.4488 S22: -0.1242 S23: -0.5062 REMARK 3 S31: 0.1105 S32: 0.1554 S33: 0.0295 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'P' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.6983 -0.8948 -15.8409 REMARK 3 T TENSOR REMARK 3 T11: 0.3939 T22: 0.3553 REMARK 3 T33: 0.3850 T12: 0.0621 REMARK 3 T13: 0.0605 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 4.7500 L22: 8.6938 REMARK 3 L33: 4.0884 L12: -2.6802 REMARK 3 L13: 2.4930 L23: -4.5682 REMARK 3 S TENSOR REMARK 3 S11: -0.1350 S12: -0.4982 S13: -0.5433 REMARK 3 S21: 0.1056 S22: 0.1462 S23: -0.0195 REMARK 3 S31: 0.2865 S32: -0.0543 S33: 0.0374 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292116006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 145908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 49.051 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5OMF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS E7: 0.12 M ETHYLENE GLYCOLS REMARK 280 (0.3 M DIETHYLENE GLYCOL, 0.3 M TRIETHYLENE GLYCOL, 0.3 M REMARK 280 TETRAETHYLENE GLYCOL, 0.3 M PENTAETHYLENE GLYCOL), 0.1 M SODIUM REMARK 280 HEPES/MOPS PH 7.5, 50 % (V/V) OF A MIXTURE OF GLYCEROL (40 % V/V) REMARK 280 AND PEG 4000 (20 % W/V), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.04050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.57650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.04050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.57650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 971 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 757 REMARK 465 GLN A 758 REMARK 465 LYS A 759 REMARK 465 THR A 760 REMARK 465 ARG A 761 REMARK 465 GLN A 762 REMARK 465 VAL A 763 REMARK 465 GLY A 764 REMARK 465 LEU A 765 REMARK 465 SER A 766 REMARK 465 ALA A 767 REMARK 465 TRP A 768 REMARK 465 LEU A 769 REMARK 465 LYS A 770 REMARK 465 PRO A 771 REMARK 465 LYS A 772 REMARK 465 GLY A 773 REMARK 465 THR A 774 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 199 O ALA A 231 1.45 REMARK 500 H ASP A 472 O HOH A 906 1.45 REMARK 500 HH TYR A 673 OP1 DG P 8 1.52 REMARK 500 HE ARG A 613 O HOH A 911 1.56 REMARK 500 OE1 GLU A 354 HH TYR A 496 1.59 REMARK 500 O HOH P 201 O HOH P 210 1.91 REMARK 500 O HOH T 211 O HOH P 208 1.94 REMARK 500 O HOH A 1080 O HOH A 1134 2.05 REMARK 500 OE1 GLU A 475 O HOH A 901 2.15 REMARK 500 O HOH A 1056 O HOH A 1119 2.15 REMARK 500 OP2 DC P 9 O HOH P 201 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA T 2 C2' DA T 2 C1' 0.071 REMARK 500 DT T 3 C5 DT T 3 C7 -0.037 REMARK 500 DC T 5 O3' DC T 5 C3' 0.093 REMARK 500 DA T 7 C3' DA T 7 C2' 0.089 REMARK 500 DA T 7 O4' DA T 7 C1' 0.081 REMARK 500 DA T 7 C1' DA T 7 N9 -0.097 REMARK 500 DT T 9 C5 DT T 9 C7 -0.042 REMARK 500 DG T 10 O3' DG T 10 C3' -0.053 REMARK 500 DT T 11 P DT T 11 O5' 0.076 REMARK 500 DT T 11 O3' DT T 11 C3' -0.053 REMARK 500 DT T 11 C5 DT T 11 C7 -0.041 REMARK 500 DC T 15 C2' DC T 15 C1' 0.072 REMARK 500 DC T 15 C1' DC T 15 N1 -0.095 REMARK 500 DT T 20 C5 DT T 20 C7 -0.036 REMARK 500 DG P 1 C5' DG P 1 C4' 0.043 REMARK 500 DC P 4 C5' DC P 4 C4' 0.056 REMARK 500 DC P 10 C2' DC P 10 C1' 0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT T 3 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DC T 5 O4' - C1' - C2' ANGL. DEV. = 3.4 DEGREES REMARK 500 DA T 7 C3' - C2' - C1' ANGL. DEV. = -6.9 DEGREES REMARK 500 DC T 8 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT T 9 O4' - C1' - C2' ANGL. DEV. = 3.9 DEGREES REMARK 500 DT T 11 O5' - P - OP2 ANGL. DEV. = -9.0 DEGREES REMARK 500 DG T 12 O3' - P - OP2 ANGL. DEV. = 7.4 DEGREES REMARK 500 DG T 13 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DC T 15 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG T 16 O4' - C4' - C3' ANGL. DEV. = -4.0 DEGREES REMARK 500 DT T 17 C4' - C3' - C2' ANGL. DEV. = 6.7 DEGREES REMARK 500 DT T 20 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DA P 2 O5' - P - OP2 ANGL. DEV. = -5.5 DEGREES REMARK 500 DC P 3 C4' - C3' - C2' ANGL. DEV. = 5.5 DEGREES REMARK 500 DG P 7 C4' - C3' - C2' ANGL. DEV. = 6.3 DEGREES REMARK 500 DC P 10 O4' - C1' - N1 ANGL. DEV. = 5.5 DEGREES REMARK 500 DOC P 12 O3' - P - O5' ANGL. DEV. = -13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 59 63.57 39.81 REMARK 500 ASP A 177 74.45 -100.05 REMARK 500 PHE A 214 -62.74 -140.22 REMARK 500 SER A 407 61.71 31.59 REMARK 500 GLN A 436 -53.34 61.15 REMARK 500 TRP A 504 47.40 -86.46 REMARK 500 CYS A 506 86.31 -161.86 REMARK 500 THR A 541 -54.65 69.99 REMARK 500 ASP A 542 12.51 -153.03 REMARK 500 LYS A 692 95.33 84.73 REMARK 500 VAL A 737 -72.32 -67.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 251 OE2 REMARK 620 2 HOH A 907 O 105.7 REMARK 620 3 HOH A 970 O 79.0 163.2 REMARK 620 4 HOH A 999 O 80.6 84.8 80.0 REMARK 620 5 HOH A1052 O 107.9 98.8 94.9 169.2 REMARK 620 6 HOH A1100 O 144.9 99.1 70.6 77.3 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 404 OD1 REMARK 620 2 ASP A 542 OD1 95.3 REMARK 620 3 DTP A 801 O1A 107.8 87.8 REMARK 620 4 HOH A1043 O 103.6 99.4 146.9 REMARK 620 5 HOH A1074 O 94.3 164.3 77.4 90.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 804 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 404 OD2 REMARK 620 2 PHE A 405 O 84.5 REMARK 620 3 ASP A 542 OD2 108.2 93.5 REMARK 620 4 DTP A 801 O1G 77.3 86.1 174.3 REMARK 620 5 DTP A 801 O1B 158.0 91.5 93.6 80.8 REMARK 620 6 DTP A 801 O1A 93.8 175.3 91.2 89.2 88.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 806 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 404 OD2 REMARK 620 2 GLU A 580 OE1 125.0 REMARK 620 3 DTP A 801 O1G 72.9 160.4 REMARK 620 4 HOH A 928 O 158.8 75.5 87.7 REMARK 620 5 HOH A 931 O 88.4 81.0 92.8 101.3 REMARK 620 6 HOH A 951 O 87.8 104.7 82.0 80.9 174.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 805 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1030 O REMARK 620 2 HOH A1121 O 123.1 REMARK 620 3 HOH A1123 O 110.8 89.3 REMARK 620 4 HOH T 212 O 78.8 156.5 89.9 REMARK 620 5 HOH T 220 O 175.2 54.0 73.6 103.5 REMARK 620 6 HOH P 202 O 80.0 91.4 166.4 84.1 95.9 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7OM3 RELATED DB: PDB REMARK 900 7OM3 CONTAINS THE SAME PROTEIN WITH A DIFFERENT DNA SEQUENCE BOUND DBREF 7OMB A 1 406 UNP P77933 DPOL_THEKO 1 406 DBREF 7OMB A 407 490 UNP P77933 DPOL_THEKO 767 850 DBREF 7OMB A 491 774 UNP P77933 DPOL_THEKO 1388 1671 DBREF 7OMB T 1 21 PDB 7OMB 7OMB 1 21 DBREF 7OMB P 1 12 PDB 7OMB 7OMB 1 12 SEQADV 7OMB ALA A 141 UNP P77933 ASP 141 ENGINEERED MUTATION SEQADV 7OMB ALA A 143 UNP P77933 GLU 143 ENGINEERED MUTATION SEQRES 1 A 774 MET ILE LEU ASP THR ASP TYR ILE THR GLU ASP GLY LYS SEQRES 2 A 774 PRO VAL ILE ARG ILE PHE LYS LYS GLU ASN GLY GLU PHE SEQRES 3 A 774 LYS ILE GLU TYR ASP ARG THR PHE GLU PRO TYR PHE TYR SEQRES 4 A 774 ALA LEU LEU LYS ASP ASP SER ALA ILE GLU GLU VAL LYS SEQRES 5 A 774 LYS ILE THR ALA GLU ARG HIS GLY THR VAL VAL THR VAL SEQRES 6 A 774 LYS ARG VAL GLU LYS VAL GLN LYS LYS PHE LEU GLY ARG SEQRES 7 A 774 PRO VAL GLU VAL TRP LYS LEU TYR PHE THR HIS PRO GLN SEQRES 8 A 774 ASP VAL PRO ALA ILE ARG ASP LYS ILE ARG GLU HIS PRO SEQRES 9 A 774 ALA VAL ILE ASP ILE TYR GLU TYR ASP ILE PRO PHE ALA SEQRES 10 A 774 LYS ARG TYR LEU ILE ASP LYS GLY LEU VAL PRO MET GLU SEQRES 11 A 774 GLY ASP GLU GLU LEU LYS MET LEU ALA PHE ALA ILE ALA SEQRES 12 A 774 THR LEU TYR HIS GLU GLY GLU GLU PHE ALA GLU GLY PRO SEQRES 13 A 774 ILE LEU MET ILE SER TYR ALA ASP GLU GLU GLY ALA ARG SEQRES 14 A 774 VAL ILE THR TRP LYS ASN VAL ASP LEU PRO TYR VAL ASP SEQRES 15 A 774 VAL VAL SER THR GLU ARG GLU MET ILE LYS ARG PHE LEU SEQRES 16 A 774 ARG VAL VAL LYS GLU LYS ASP PRO ASP VAL LEU ILE THR SEQRES 17 A 774 TYR ASN GLY ASP ASN PHE ASP PHE ALA TYR LEU LYS LYS SEQRES 18 A 774 ARG CYS GLU LYS LEU GLY ILE ASN PHE ALA LEU GLY ARG SEQRES 19 A 774 ASP GLY SER GLU PRO LYS ILE GLN ARG MET GLY ASP ARG SEQRES 20 A 774 PHE ALA VAL GLU VAL LYS GLY ARG ILE HIS PHE ASP LEU SEQRES 21 A 774 TYR PRO VAL ILE ARG ARG THR ILE ASN LEU PRO THR TYR SEQRES 22 A 774 THR LEU GLU ALA VAL TYR GLU ALA VAL PHE GLY GLN PRO SEQRES 23 A 774 LYS GLU LYS VAL TYR ALA GLU GLU ILE THR THR ALA TRP SEQRES 24 A 774 GLU THR GLY GLU ASN LEU GLU ARG VAL ALA ARG TYR SER SEQRES 25 A 774 MET GLU ASP ALA LYS VAL THR TYR GLU LEU GLY LYS GLU SEQRES 26 A 774 PHE LEU PRO MET GLU ALA GLN LEU SER ARG LEU ILE GLY SEQRES 27 A 774 GLN SER LEU TRP ASP VAL SER ARG SER SER THR GLY ASN SEQRES 28 A 774 LEU VAL GLU TRP PHE LEU LEU ARG LYS ALA TYR GLU ARG SEQRES 29 A 774 ASN GLU LEU ALA PRO ASN LYS PRO ASP GLU LYS GLU LEU SEQRES 30 A 774 ALA ARG ARG ARG GLN SER TYR GLU GLY GLY TYR VAL LYS SEQRES 31 A 774 GLU PRO GLU ARG GLY LEU TRP GLU ASN ILE VAL TYR LEU SEQRES 32 A 774 ASP PHE ARG SER LEU TYR PRO SER ILE ILE ILE THR HIS SEQRES 33 A 774 ASN VAL SER PRO ASP THR LEU ASN ARG GLU GLY CYS LYS SEQRES 34 A 774 GLU TYR ASP VAL ALA PRO GLN VAL GLY HIS ARG PHE CYS SEQRES 35 A 774 LYS ASP PHE PRO GLY PHE ILE PRO SER LEU LEU GLY ASP SEQRES 36 A 774 LEU LEU GLU GLU ARG GLN LYS ILE LYS LYS LYS MET LYS SEQRES 37 A 774 ALA THR ILE ASP PRO ILE GLU ARG LYS LEU LEU ASP TYR SEQRES 38 A 774 ARG GLN ARG ALA ILE LYS ILE LEU ALA ASN SER TYR TYR SEQRES 39 A 774 GLY TYR TYR GLY TYR ALA ARG ALA ARG TRP TYR CYS LYS SEQRES 40 A 774 GLU CYS ALA GLU SER VAL THR ALA TRP GLY ARG GLU TYR SEQRES 41 A 774 ILE THR MET THR ILE LYS GLU ILE GLU GLU LYS TYR GLY SEQRES 42 A 774 PHE LYS VAL ILE TYR SER ASP THR ASP GLY PHE PHE ALA SEQRES 43 A 774 THR ILE PRO GLY ALA ASP ALA GLU THR VAL LYS LYS LYS SEQRES 44 A 774 ALA MET GLU PHE LEU LYS TYR ILE ASN ALA LYS LEU PRO SEQRES 45 A 774 GLY ALA LEU GLU LEU GLU TYR GLU GLY PHE TYR LYS ARG SEQRES 46 A 774 GLY PHE PHE VAL THR LYS LYS LYS TYR ALA VAL ILE ASP SEQRES 47 A 774 GLU GLU GLY LYS ILE THR THR ARG GLY LEU GLU ILE VAL SEQRES 48 A 774 ARG ARG ASP TRP SER GLU ILE ALA LYS GLU THR GLN ALA SEQRES 49 A 774 ARG VAL LEU GLU ALA LEU LEU LYS ASP GLY ASP VAL GLU SEQRES 50 A 774 LYS ALA VAL ARG ILE VAL LYS GLU VAL THR GLU LYS LEU SEQRES 51 A 774 SER LYS TYR GLU VAL PRO PRO GLU LYS LEU VAL ILE HIS SEQRES 52 A 774 GLU GLN ILE THR ARG ASP LEU LYS ASP TYR LYS ALA THR SEQRES 53 A 774 GLY PRO HIS VAL ALA VAL ALA LYS ARG LEU ALA ALA ARG SEQRES 54 A 774 GLY VAL LYS ILE ARG PRO GLY THR VAL ILE SER TYR ILE SEQRES 55 A 774 VAL LEU LYS GLY SER GLY ARG ILE GLY ASP ARG ALA ILE SEQRES 56 A 774 PRO PHE ASP GLU PHE ASP PRO THR LYS HIS LYS TYR ASP SEQRES 57 A 774 ALA GLU TYR TYR ILE GLU ASN GLN VAL LEU PRO ALA VAL SEQRES 58 A 774 GLU ARG ILE LEU ARG ALA PHE GLY TYR ARG LYS GLU ASP SEQRES 59 A 774 LEU ARG TYR GLN LYS THR ARG GLN VAL GLY LEU SER ALA SEQRES 60 A 774 TRP LEU LYS PRO LYS GLY THR SEQRES 1 T 21 DT DA DT DG DC DA DA DC DT DG DT DG DG SEQRES 2 T 21 DC DC DG DT DG DG DT DC SEQRES 1 P 12 DG DA DC DC DA DC DG DG DC DC DA DOC HET DOC P 12 30 HET DTP A 801 42 HET MG A 802 1 HET MG A 803 1 HET MN A 804 1 HET MN A 805 1 HET MN A 806 1 HET EDO A 807 10 HET EDO A 808 10 HET EDO A 809 10 HET EDO A 810 10 HET EDO T 101 10 HET MN P 101 1 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM MN MANGANESE (II) ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 DOC C9 H14 N3 O6 P FORMUL 4 DTP C10 H16 N5 O12 P3 FORMUL 5 MG 2(MG 2+) FORMUL 7 MN 4(MN 2+) FORMUL 10 EDO 5(C2 H6 O2) FORMUL 16 HOH *277(H2 O) HELIX 1 AA1 ASP A 44 SER A 46 5 3 HELIX 2 AA2 ALA A 47 LYS A 52 1 6 HELIX 3 AA3 GLN A 91 GLU A 102 1 12 HELIX 4 AA4 PRO A 115 GLY A 125 1 11 HELIX 5 AA5 THR A 186 ASP A 202 1 17 HELIX 6 AA6 PHE A 214 GLY A 227 1 14 HELIX 7 AA7 LEU A 260 ILE A 268 1 9 HELIX 8 AA8 THR A 274 GLY A 284 1 11 HELIX 9 AA9 TYR A 291 GLY A 302 1 12 HELIX 10 AB1 ASN A 304 GLY A 338 1 35 HELIX 11 AB2 SER A 340 ARG A 346 1 7 HELIX 12 AB3 SER A 348 ASN A 365 1 18 HELIX 13 AB4 ASP A 373 ARG A 380 1 8 HELIX 14 AB5 SER A 407 ASN A 417 1 11 HELIX 15 AB6 GLY A 447 ALA A 469 1 23 HELIX 16 AB7 ASP A 472 GLY A 498 1 27 HELIX 17 AB8 CYS A 506 GLY A 533 1 28 HELIX 18 AB9 ASP A 552 LEU A 571 1 20 HELIX 19 AC1 LEU A 608 ARG A 612 5 5 HELIX 20 AC2 SER A 616 LYS A 632 1 17 HELIX 21 AC3 ASP A 635 LYS A 652 1 18 HELIX 22 AC4 PRO A 656 VAL A 661 5 6 HELIX 23 AC5 ASP A 669 TYR A 673 5 5 HELIX 24 AC6 GLY A 677 ARG A 689 1 13 HELIX 25 AC7 ARG A 709 ASP A 712 5 4 HELIX 26 AC8 ASP A 718 PHE A 720 5 3 HELIX 27 AC9 ASP A 728 GLN A 736 1 9 HELIX 28 AD1 GLN A 736 ARG A 746 1 11 HELIX 29 AD2 ALA A 747 GLY A 749 5 3 HELIX 30 AD3 ARG A 751 ARG A 756 5 6 SHEET 1 AA1 3 ILE A 2 GLU A 10 0 SHEET 2 AA1 3 LYS A 13 GLU A 22 -1 O PHE A 19 N LEU A 3 SHEET 3 AA1 3 GLU A 25 ASP A 31 -1 O LYS A 27 N LYS A 20 SHEET 1 AA2 4 ARG A 67 PHE A 75 0 SHEET 2 AA2 4 ARG A 78 TYR A 86 -1 O LYS A 84 N GLU A 69 SHEET 3 AA2 4 TYR A 37 LEU A 42 -1 N PHE A 38 O LEU A 85 SHEET 4 AA2 4 VAL A 106 TYR A 110 -1 O ILE A 107 N LEU A 41 SHEET 1 AA3 2 THR A 55 ARG A 58 0 SHEET 2 AA3 2 THR A 61 THR A 64 -1 O VAL A 63 N ALA A 56 SHEET 1 AA4 6 VAL A 181 VAL A 183 0 SHEET 2 AA4 6 GLY A 167 THR A 172 1 N VAL A 170 O ASP A 182 SHEET 3 AA4 6 ILE A 157 ASP A 164 -1 N ILE A 160 O ILE A 171 SHEET 4 AA4 6 MET A 137 THR A 144 -1 N ALA A 143 O LEU A 158 SHEET 5 AA4 6 VAL A 205 THR A 208 1 O ILE A 207 N LEU A 138 SHEET 6 AA4 6 ILE A 256 ASP A 259 1 O PHE A 258 N LEU A 206 SHEET 1 AA5 2 LYS A 240 MET A 244 0 SHEET 2 AA5 2 ARG A 247 GLU A 251 -1 O ALA A 249 N GLN A 242 SHEET 1 AA6 6 LYS A 535 ASP A 540 0 SHEET 2 AA6 6 GLY A 543 THR A 547 -1 O THR A 547 N LYS A 535 SHEET 3 AA6 6 GLY A 395 PHE A 405 -1 N VAL A 401 O ALA A 546 SHEET 4 AA6 6 LEU A 577 THR A 590 -1 O TYR A 583 N ILE A 400 SHEET 5 AA6 6 LYS A 593 ILE A 597 -1 O ALA A 595 N PHE A 587 SHEET 6 AA6 6 ILE A 603 ARG A 606 -1 O ARG A 606 N TYR A 594 SHEET 1 AA7 2 TYR A 431 VAL A 433 0 SHEET 2 AA7 2 ARG A 440 CYS A 442 -1 O PHE A 441 N ASP A 432 SHEET 1 AA8 3 ILE A 662 GLN A 665 0 SHEET 2 AA8 3 VAL A 698 VAL A 703 -1 O TYR A 701 N ILE A 662 SHEET 3 AA8 3 ALA A 714 PRO A 716 -1 O ILE A 715 N ILE A 702 SSBOND 1 CYS A 428 CYS A 442 1555 1555 2.11 SSBOND 2 CYS A 506 CYS A 509 1555 1555 2.27 LINK O3' DA P 11 P DOC P 12 1555 1555 1.55 LINK OE2 GLU A 251 MG MG A 802 1555 1555 2.23 LINK OD1 ASP A 404 MG MG A 803 1555 1555 2.09 LINK OD2 ASP A 404 MN MN A 804 1555 1555 2.08 LINK OD2 ASP A 404 MN MN A 806 1555 1555 2.24 LINK O PHE A 405 MN MN A 804 1555 1555 2.16 LINK OD1 ASP A 542 MG MG A 803 1555 1555 2.11 LINK OD2 ASP A 542 MN MN A 804 1555 1555 2.08 LINK OE1 GLU A 580 MN MN A 806 1555 1555 2.41 LINK O1A DTP A 801 MG MG A 803 1555 1555 2.27 LINK O1G DTP A 801 MN MN A 804 1555 1555 2.23 LINK O1B DTP A 801 MN MN A 804 1555 1555 2.22 LINK O1A DTP A 801 MN MN A 804 1555 1555 2.29 LINK O1G DTP A 801 MN MN A 806 1555 1555 2.31 LINK MG MG A 802 O HOH A 907 1555 1555 2.29 LINK MG MG A 802 O HOH A 970 1555 1555 1.90 LINK MG MG A 802 O HOH A 999 1555 1555 1.96 LINK MG MG A 802 O HOH A1052 1555 1555 2.07 LINK MG MG A 802 O HOH A1100 1555 1555 2.31 LINK MG MG A 803 O HOH A1043 1555 1555 2.30 LINK MG MG A 803 O HOH A1074 1555 1555 2.40 LINK MN MN A 805 O HOH A1030 1555 1555 2.79 LINK MN MN A 805 O HOH A1121 1555 1555 2.49 LINK MN MN A 805 O HOH A1123 1555 1555 2.22 LINK MN MN A 805 O HOH T 212 1555 1555 2.43 LINK MN MN A 805 O HOH T 220 1555 1555 2.42 LINK MN MN A 805 O HOH P 202 1555 1555 2.56 LINK MN MN A 806 O HOH A 928 1555 1555 2.32 LINK MN MN A 806 O HOH A 931 1555 1555 2.01 LINK MN MN A 806 O HOH A 951 1555 1555 2.39 LINK N7 DG P 7 MN MN P 101 1555 1555 2.71 CRYST1 108.081 147.153 71.332 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009252 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006796 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014019 0.00000