HEADER VIRAL PROTEIN 04-JUN-21 7OR9 TITLE CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF SARS-COV-2 SPIKE TITLE 2 GLYCOPROTEIN IN COMPLEX WITH COVOX-222 AND COVOX-278 FABS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: E; COMPND 4 SYNONYM: RBD OF S1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: COVOX-222 FAB HEAVY CHAIN; COMPND 8 CHAIN: A; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: COVOX-222 FAB LIGHT CHAIN; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: COVOX-278 FAB HEAVY CHAIN; COMPND 16 CHAIN: H; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: COVOX-278 FAB LIGHT CHAIN; COMPND 20 CHAIN: L; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 24 MOL_ID: 5; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2 B.1.1.7 VARIANT, B.1.351 VARIANT, P.1 VARIANT, B.1.617 KEYWDS 2 VARIANT, ANTIBODY, RECEPTOR-BINDING-DOMAIN, SPIKE, NEUTRALISATION, KEYWDS 3 VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,J.REN,D.I.STUART REVDAT 4 31-JAN-24 7OR9 1 REMARK REVDAT 3 18-AUG-21 7OR9 1 JRNL REVDAT 2 21-JUL-21 7OR9 1 JRNL REVDAT 1 07-JUL-21 7OR9 0 JRNL AUTH C.LIU,H.M.GINN,W.DEJNIRATTISAI,P.SUPASA,B.WANG, JRNL AUTH 2 A.TUEKPRAKHON,R.NUTALAI,D.ZHOU,A.J.MENTZER,Y.ZHAO, JRNL AUTH 3 H.M.E.DUYVESTEYN,C.LOPEZ-CAMACHO,J.SLON-CAMPOS,T.S.WALTER, JRNL AUTH 4 D.SKELLY,S.A.JOHNSON,T.G.RITTER,C.MASON,S.A.COSTA CLEMENS, JRNL AUTH 5 F.GOMES NAVECA,V.NASCIMENTO,F.NASCIMENTO, JRNL AUTH 6 C.FERNANDES DA COSTA,P.C.RESENDE,A.PAUVOLID-CORREA, JRNL AUTH 7 M.M.SIQUEIRA,C.DOLD,N.TEMPERTON,T.DONG,A.J.POLLARD, JRNL AUTH 8 J.C.KNIGHT,D.CROOK,T.LAMBE,E.CLUTTERBUCK,S.BIBI,A.FLAXMAN, JRNL AUTH 9 M.BITTAYE,S.BELIJ-RAMMERSTORFER,S.C.GILBERT,T.MALIK, JRNL AUTH10 M.W.CARROLL,P.KLENERMAN,E.BARNES,S.J.DUNACHIE,V.BAILLIE, JRNL AUTH11 N.SERAFIN,Z.DITSE,K.DA SILVA,N.G.PATERSON,M.A.WILLIAMS, JRNL AUTH12 D.R.HALL,S.MADHI,M.C.NUNES,P.GOULDER,E.E.FRY, JRNL AUTH13 J.MONGKOLSAPAYA,J.REN,D.I.STUART,G.R.SCREATON JRNL TITL REDUCED NEUTRALIZATION OF SARS-COV-2 B.1.617 BY VACCINE AND JRNL TITL 2 CONVALESCENT SERUM. JRNL REF CELL V. 184 4220 2021 JRNL REFN ISSN 1097-4172 JRNL PMID 34242578 JRNL DOI 10.1016/J.CELL.2021.06.020 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.1 REMARK 3 NUMBER OF REFLECTIONS : 53154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.2300 - 6.2400 1.00 3317 173 0.1635 0.1687 REMARK 3 2 6.2400 - 4.9600 1.00 3148 183 0.1526 0.1872 REMARK 3 3 4.9500 - 4.3300 1.00 3134 170 0.1306 0.1577 REMARK 3 4 4.3300 - 3.9300 1.00 3100 157 0.1521 0.2071 REMARK 3 5 3.9300 - 3.6500 1.00 3126 160 0.1879 0.2536 REMARK 3 6 3.6500 - 3.4400 1.00 3101 150 0.1981 0.2749 REMARK 3 7 3.4400 - 3.2600 1.00 3085 156 0.2208 0.2483 REMARK 3 8 3.2600 - 3.1200 1.00 3049 193 0.2354 0.2680 REMARK 3 9 3.1200 - 3.0000 1.00 3085 152 0.2489 0.2873 REMARK 3 10 3.0000 - 2.9000 1.00 3064 158 0.2567 0.2891 REMARK 3 11 2.9000 - 2.8100 0.99 2994 161 0.2544 0.2665 REMARK 3 12 2.8100 - 2.7300 0.95 2897 150 0.2589 0.2962 REMARK 3 13 2.7300 - 2.6600 0.81 2497 124 0.2592 0.3350 REMARK 3 14 2.6600 - 2.5900 0.74 2280 96 0.2705 0.3377 REMARK 3 15 2.5900 - 2.5300 0.68 2043 119 0.2821 0.3063 REMARK 3 16 2.5300 - 2.4800 0.61 1877 106 0.3251 0.3581 REMARK 3 17 2.4800 - 2.4300 0.57 1728 85 0.3161 0.4220 REMARK 3 18 2.4300 - 2.3800 0.51 1547 85 0.3518 0.3884 REMARK 3 19 2.3800 - 2.3400 0.47 1429 75 0.3772 0.3884 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.311 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.542 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 8321 REMARK 3 ANGLE : 0.541 11319 REMARK 3 CHIRALITY : 0.043 1270 REMARK 3 PLANARITY : 0.005 1450 REMARK 3 DIHEDRAL : 11.494 2981 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 333 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2601 3.5344 -71.2044 REMARK 3 T TENSOR REMARK 3 T11: 0.4616 T22: 0.5548 REMARK 3 T33: 0.6148 T12: 0.0414 REMARK 3 T13: -0.1565 T23: 0.1060 REMARK 3 L TENSOR REMARK 3 L11: 3.3340 L22: 3.5194 REMARK 3 L33: 9.2200 L12: 1.1269 REMARK 3 L13: -1.0617 L23: -0.5259 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.6942 S13: 0.4606 REMARK 3 S21: -0.6422 S22: 0.0640 S23: 0.8725 REMARK 3 S31: -0.3361 S32: -0.9757 S33: 0.1221 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 376 THROUGH 506 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8291 4.4529 -60.8528 REMARK 3 T TENSOR REMARK 3 T11: 0.3146 T22: 0.2775 REMARK 3 T33: 0.3808 T12: -0.0298 REMARK 3 T13: 0.0077 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 1.9729 L22: 1.9379 REMARK 3 L33: 1.8177 L12: 0.0241 REMARK 3 L13: -0.1876 L23: 0.1005 REMARK 3 S TENSOR REMARK 3 S11: 0.0709 S12: 0.0809 S13: 0.0891 REMARK 3 S21: -0.2394 S22: 0.0248 S23: 0.1640 REMARK 3 S31: -0.0764 S32: -0.0545 S33: -0.1015 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 507 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4151 3.0384 -77.6385 REMARK 3 T TENSOR REMARK 3 T11: 0.5959 T22: 0.5746 REMARK 3 T33: 0.5410 T12: 0.0656 REMARK 3 T13: -0.0543 T23: 0.1153 REMARK 3 L TENSOR REMARK 3 L11: 2.5430 L22: 3.2939 REMARK 3 L33: 4.9386 L12: 1.0281 REMARK 3 L13: 1.8040 L23: -0.0266 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: 0.8405 S13: 0.1137 REMARK 3 S21: -1.0117 S22: -0.0100 S23: 0.1978 REMARK 3 S31: 0.0186 S32: 0.1419 S33: -0.0013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9237 14.9973 -47.4405 REMARK 3 T TENSOR REMARK 3 T11: 0.3439 T22: 0.4283 REMARK 3 T33: 0.5065 T12: -0.0311 REMARK 3 T13: 0.0503 T23: -0.0472 REMARK 3 L TENSOR REMARK 3 L11: 5.3235 L22: 5.6474 REMARK 3 L33: 8.4504 L12: 5.4079 REMARK 3 L13: -4.6507 L23: -5.4946 REMARK 3 S TENSOR REMARK 3 S11: 0.1923 S12: 0.0548 S13: -0.3507 REMARK 3 S21: 0.4787 S22: -0.1117 S23: -0.7748 REMARK 3 S31: -0.4717 S32: 0.6854 S33: 0.2116 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4273 12.2084 -52.7923 REMARK 3 T TENSOR REMARK 3 T11: 0.3191 T22: 0.3219 REMARK 3 T33: 0.3840 T12: -0.0271 REMARK 3 T13: 0.0643 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 1.4850 L22: 2.4284 REMARK 3 L33: 2.1813 L12: 0.7041 REMARK 3 L13: 0.3075 L23: 0.2483 REMARK 3 S TENSOR REMARK 3 S11: 0.0923 S12: -0.0212 S13: 0.0476 REMARK 3 S21: -0.2512 S22: -0.1135 S23: -0.1865 REMARK 3 S31: -0.0375 S32: 0.1552 S33: 0.0037 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5875 20.4328 -49.3663 REMARK 3 T TENSOR REMARK 3 T11: 0.2940 T22: 0.2558 REMARK 3 T33: 0.4560 T12: -0.0058 REMARK 3 T13: 0.0598 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 7.9212 L22: 5.2461 REMARK 3 L33: 6.6000 L12: 5.9411 REMARK 3 L13: -3.3920 L23: -4.2234 REMARK 3 S TENSOR REMARK 3 S11: 0.3033 S12: 0.1180 S13: 0.3606 REMARK 3 S21: 0.2425 S22: 0.0821 S23: 0.5280 REMARK 3 S31: -0.6570 S32: -0.1811 S33: -0.4105 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2634 20.9528 -35.3480 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.3729 REMARK 3 T33: 0.4776 T12: -0.0092 REMARK 3 T13: 0.0141 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.7130 L22: 1.6316 REMARK 3 L33: 1.8808 L12: 0.5007 REMARK 3 L13: 1.6685 L23: 1.5433 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: -0.1542 S13: 0.0554 REMARK 3 S21: 0.2291 S22: 0.0196 S23: -0.0874 REMARK 3 S31: 0.0417 S32: -0.2273 S33: -0.0422 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4743 21.2170 -26.5125 REMARK 3 T TENSOR REMARK 3 T11: 0.6018 T22: 0.3273 REMARK 3 T33: 0.6556 T12: -0.0144 REMARK 3 T13: -0.0594 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.1129 L22: 3.9920 REMARK 3 L33: 5.8785 L12: 0.8226 REMARK 3 L13: -0.8004 L23: -1.0428 REMARK 3 S TENSOR REMARK 3 S11: -0.0360 S12: -0.2506 S13: -0.5725 REMARK 3 S21: 0.5642 S22: 0.0287 S23: -0.4202 REMARK 3 S31: 0.8298 S32: 0.1859 S33: -0.0232 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1230 25.0737 -31.3399 REMARK 3 T TENSOR REMARK 3 T11: 0.5176 T22: 0.6494 REMARK 3 T33: 0.5946 T12: 0.0561 REMARK 3 T13: 0.0999 T23: -0.1209 REMARK 3 L TENSOR REMARK 3 L11: 7.9691 L22: 7.7843 REMARK 3 L33: 2.9452 L12: -2.3085 REMARK 3 L13: 3.6377 L23: -4.0723 REMARK 3 S TENSOR REMARK 3 S11: 0.5125 S12: 0.0618 S13: 0.1241 REMARK 3 S21: -0.1345 S22: -0.1737 S23: 0.8493 REMARK 3 S31: -0.6761 S32: -1.3249 S33: -0.1947 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5381 22.4016 -39.3514 REMARK 3 T TENSOR REMARK 3 T11: 0.6102 T22: 0.7821 REMARK 3 T33: 0.8039 T12: 0.2158 REMARK 3 T13: -0.0695 T23: -0.1975 REMARK 3 L TENSOR REMARK 3 L11: 6.7346 L22: 5.5457 REMARK 3 L33: 8.9227 L12: 3.1600 REMARK 3 L13: 5.3559 L23: 3.4517 REMARK 3 S TENSOR REMARK 3 S11: -0.8987 S12: -0.1730 S13: 1.0083 REMARK 3 S21: -0.7366 S22: -0.8588 S23: 1.5343 REMARK 3 S31: -1.6195 S32: -1.3357 S33: 1.3114 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1550 13.6649 -34.1768 REMARK 3 T TENSOR REMARK 3 T11: 0.4555 T22: 0.5439 REMARK 3 T33: 0.5190 T12: -0.0639 REMARK 3 T13: 0.1170 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 5.0077 L22: 4.6812 REMARK 3 L33: 6.5965 L12: 1.7510 REMARK 3 L13: 2.7360 L23: 2.7581 REMARK 3 S TENSOR REMARK 3 S11: -0.0448 S12: -0.4641 S13: 0.4042 REMARK 3 S21: 0.3392 S22: -0.3269 S23: 0.4135 REMARK 3 S31: -0.0023 S32: -0.8868 S33: 0.3349 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0854 18.1512 -36.0527 REMARK 3 T TENSOR REMARK 3 T11: 0.4023 T22: 0.5432 REMARK 3 T33: 0.6145 T12: -0.0631 REMARK 3 T13: 0.1026 T23: -0.0570 REMARK 3 L TENSOR REMARK 3 L11: 1.5065 L22: 3.0077 REMARK 3 L33: 2.5814 L12: 1.5495 REMARK 3 L13: 1.3109 L23: 2.8054 REMARK 3 S TENSOR REMARK 3 S11: 0.3674 S12: -0.5279 S13: 0.2011 REMARK 3 S21: 0.2180 S22: -0.0668 S23: 0.2155 REMARK 3 S31: -0.1720 S32: -0.4926 S33: -0.3588 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3893 29.1376 -19.6831 REMARK 3 T TENSOR REMARK 3 T11: 0.5830 T22: 0.4330 REMARK 3 T33: 0.5036 T12: -0.0504 REMARK 3 T13: 0.0832 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.8764 L22: 2.9255 REMARK 3 L33: 1.7765 L12: 2.7291 REMARK 3 L13: 1.8532 L23: 2.3075 REMARK 3 S TENSOR REMARK 3 S11: 0.2730 S12: -0.5230 S13: -0.2801 REMARK 3 S21: 0.2994 S22: -0.4117 S23: 0.0609 REMARK 3 S31: 0.2726 S32: -0.3966 S33: 0.1900 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 122 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6102 37.3432 -20.7060 REMARK 3 T TENSOR REMARK 3 T11: 0.4367 T22: 0.3356 REMARK 3 T33: 0.3373 T12: -0.0116 REMARK 3 T13: -0.0721 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 7.3447 L22: 4.5925 REMARK 3 L33: 3.2508 L12: 4.0158 REMARK 3 L13: -1.9243 L23: 0.5240 REMARK 3 S TENSOR REMARK 3 S11: -0.1910 S12: -0.0504 S13: -0.4228 REMARK 3 S21: 0.0064 S22: 0.0333 S23: -0.1404 REMARK 3 S31: 0.2071 S32: 0.0830 S33: 0.1313 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2205 29.8528 -23.4560 REMARK 3 T TENSOR REMARK 3 T11: 0.5908 T22: 0.3716 REMARK 3 T33: 0.4980 T12: -0.0572 REMARK 3 T13: 0.0350 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 8.8946 L22: 4.1906 REMARK 3 L33: 6.5237 L12: 5.9683 REMARK 3 L13: -3.5084 L23: -3.3653 REMARK 3 S TENSOR REMARK 3 S11: -0.2030 S12: 0.2044 S13: -0.1032 REMARK 3 S21: 0.3662 S22: 0.1478 S23: 0.3022 REMARK 3 S31: 0.7444 S32: -0.3321 S33: 0.1132 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 175 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7384 40.4044 -17.0076 REMARK 3 T TENSOR REMARK 3 T11: 0.4776 T22: 0.3552 REMARK 3 T33: 0.4742 T12: 0.0473 REMARK 3 T13: -0.0991 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 8.8708 L22: 3.7722 REMARK 3 L33: 4.3384 L12: 3.5870 REMARK 3 L13: -3.4892 L23: -0.5657 REMARK 3 S TENSOR REMARK 3 S11: 0.2077 S12: -0.6852 S13: 0.3475 REMARK 3 S21: 0.3773 S22: -0.1548 S23: -0.1187 REMARK 3 S31: 0.0056 S32: 0.2990 S33: -0.0443 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2900 -8.2215 -32.2505 REMARK 3 T TENSOR REMARK 3 T11: 0.2416 T22: 0.4902 REMARK 3 T33: 0.4779 T12: -0.0196 REMARK 3 T13: -0.0398 T23: 0.1205 REMARK 3 L TENSOR REMARK 3 L11: 3.1394 L22: 2.7200 REMARK 3 L33: 6.6073 L12: 1.6764 REMARK 3 L13: -1.7300 L23: -1.2086 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: -0.6240 S13: -0.2630 REMARK 3 S21: 0.2744 S22: -0.4036 S23: -0.2238 REMARK 3 S31: 0.0075 S32: 0.4282 S33: 0.2877 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 122 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.9174 -23.2346 -16.1979 REMARK 3 T TENSOR REMARK 3 T11: 0.4333 T22: 0.4045 REMARK 3 T33: 0.4139 T12: -0.0099 REMARK 3 T13: 0.0453 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.2300 L22: 4.1433 REMARK 3 L33: 7.4810 L12: 1.5787 REMARK 3 L13: 0.7791 L23: 1.4773 REMARK 3 S TENSOR REMARK 3 S11: 0.1071 S12: -0.4531 S13: -0.2850 REMARK 3 S21: 0.4799 S22: -0.0968 S23: 0.1423 REMARK 3 S31: 0.2348 S32: 0.2516 S33: -0.0231 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.8111 -4.0279 -45.7229 REMARK 3 T TENSOR REMARK 3 T11: 0.3627 T22: 0.3899 REMARK 3 T33: 0.4428 T12: -0.0166 REMARK 3 T13: -0.0516 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 7.4257 L22: 2.5437 REMARK 3 L33: 1.2516 L12: 1.6420 REMARK 3 L13: -1.0980 L23: -0.4964 REMARK 3 S TENSOR REMARK 3 S11: 0.1673 S12: 0.1095 S13: 0.2062 REMARK 3 S21: -0.1049 S22: -0.1529 S23: 0.1572 REMARK 3 S31: 0.0524 S32: -0.3238 S33: -0.0656 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 19 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.4363 -5.4751 -49.4150 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 0.2868 REMARK 3 T33: 0.3144 T12: 0.0271 REMARK 3 T13: -0.0143 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 5.1444 L22: 3.1326 REMARK 3 L33: 2.5114 L12: 1.0682 REMARK 3 L13: -0.5705 L23: 0.5332 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: 0.0696 S13: -0.0982 REMARK 3 S21: -0.2794 S22: -0.0148 S23: 0.0935 REMARK 3 S31: -0.0514 S32: -0.0804 S33: 0.1126 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.2723 -10.5277 -33.8708 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.3790 REMARK 3 T33: 0.3691 T12: -0.0168 REMARK 3 T13: 0.0203 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.8394 L22: 0.8268 REMARK 3 L33: 2.0018 L12: 0.5951 REMARK 3 L13: -1.5613 L23: -1.2609 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: -0.1382 S13: 0.0153 REMARK 3 S21: 0.1874 S22: -0.0579 S23: 0.1116 REMARK 3 S31: 0.0040 S32: -0.2218 S33: 0.0838 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 130 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -70.2212 -7.1950 -23.4873 REMARK 3 T TENSOR REMARK 3 T11: 0.5878 T22: 0.4622 REMARK 3 T33: 0.5912 T12: -0.0510 REMARK 3 T13: 0.0862 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.4535 L22: 3.0070 REMARK 3 L33: 6.4085 L12: -0.1312 REMARK 3 L13: -1.4403 L23: 1.4472 REMARK 3 S TENSOR REMARK 3 S11: 0.1739 S12: 0.0049 S13: 0.4461 REMARK 3 S21: 0.2752 S22: -0.1017 S23: 0.2174 REMARK 3 S31: -0.8889 S32: 0.0046 S33: -0.1335 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 165 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -65.6147 -20.0015 -35.9218 REMARK 3 T TENSOR REMARK 3 T11: 0.5290 T22: 0.5390 REMARK 3 T33: 0.5179 T12: -0.1040 REMARK 3 T13: -0.0076 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 9.7624 L22: 4.5374 REMARK 3 L33: 7.2896 L12: -6.6497 REMARK 3 L13: -6.9190 L23: 4.6201 REMARK 3 S TENSOR REMARK 3 S11: -0.5044 S12: 0.1500 S13: -0.5919 REMARK 3 S21: -0.5382 S22: 0.3179 S23: 0.5228 REMARK 3 S31: 0.5894 S32: 0.2365 S33: 0.0272 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 176 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -75.6367 -6.8720 -17.5524 REMARK 3 T TENSOR REMARK 3 T11: 0.6116 T22: 0.5708 REMARK 3 T33: 0.5596 T12: 0.0965 REMARK 3 T13: 0.1831 T23: -0.0357 REMARK 3 L TENSOR REMARK 3 L11: 1.9916 L22: 2.6767 REMARK 3 L33: 6.2502 L12: -0.5503 REMARK 3 L13: -0.1887 L23: 2.5847 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.1078 S13: 0.2246 REMARK 3 S21: 0.1396 S22: -0.1945 S23: 0.1203 REMARK 3 S31: -1.0315 S32: -0.8779 S33: 0.0244 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OR9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292116039. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53251 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7NX6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMINO ACIDS (GLU, ALA, GLY, LYS, REMARK 280 SER), 0.1 M MES/IMIDAZOLE PH 6.5, 10% (W/V) PEG 20000 AND 20% (V/ REMARK 280 V) PEG MME 550., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.96500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.96500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, A, B, H, L, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU E 324 REMARK 465 THR E 325 REMARK 465 GLY E 326 REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 HIS E 331 REMARK 465 HIS E 332 REMARK 465 LYS E 528 REMARK 465 LYS A 135 REMARK 465 SER A 136 REMARK 465 THR A 137 REMARK 465 SER A 138 REMARK 465 GLY A 139 REMARK 465 SER A 221 REMARK 465 CYS A 222 REMARK 465 ASP A 223 REMARK 465 LYS A 224 REMARK 465 CYS B 214 REMARK 465 LYS H 139 REMARK 465 SER H 140 REMARK 465 THR H 141 REMARK 465 SER H 142 REMARK 465 GLY H 143 REMARK 465 CYS H 226 REMARK 465 ASP H 227 REMARK 465 LYS H 228 REMARK 465 CYS L 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 224 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN E 343 52.98 -110.53 REMARK 500 ALA E 352 52.75 -111.67 REMARK 500 ALA E 372 -144.19 -158.69 REMARK 500 SER E 373 56.57 -106.20 REMARK 500 PHE E 374 103.87 -57.57 REMARK 500 PHE E 377 81.14 -155.07 REMARK 500 ASN E 422 -53.92 -133.44 REMARK 500 ASP E 428 40.50 -94.52 REMARK 500 ASN A 104 49.16 -162.91 REMARK 500 ASP A 150 76.53 62.28 REMARK 500 GLN B 27 146.50 -171.22 REMARK 500 SER B 28 90.54 -69.89 REMARK 500 LEU B 48 -63.31 -99.45 REMARK 500 ALA B 52 -32.32 67.46 REMARK 500 ASP B 93 -87.62 -107.75 REMARK 500 ASN B 138 74.58 54.73 REMARK 500 PHE H 156 136.35 -170.06 REMARK 500 THR H 201 -55.03 -130.42 REMARK 500 ALA L 30 -123.41 56.69 REMARK 500 ALA L 51 -36.34 69.88 REMARK 500 ALA L 84 -174.21 -170.59 REMARK 500 ASN L 139 73.52 55.83 REMARK 500 REMARK 500 REMARK: NULL DBREF 7OR9 E 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 DBREF 7OR9 A 1 224 PDB 7OR9 7OR9 1 224 DBREF 7OR9 B 1 214 PDB 7OR9 7OR9 1 214 DBREF 7OR9 H 1 228 PDB 7OR9 7OR9 1 228 DBREF 7OR9 L 1 215 PDB 7OR9 7OR9 1 215 SEQADV 7OR9 GLU E 324 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 THR E 325 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 GLY E 326 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 327 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 328 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 329 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 330 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 331 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 HIS E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7OR9 LYS E 527 UNP P0DTC2 PRO 527 CONFLICT SEQRES 1 E 205 GLU THR GLY HIS HIS HIS HIS HIS HIS THR ASN LEU CYS SEQRES 2 E 205 PRO PHE GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SER SEQRES 3 E 205 VAL TYR ALA TRP ASN ARG LYS ARG ILE SER ASN CYS VAL SEQRES 4 E 205 ALA ASP TYR SER VAL LEU TYR ASN SER ALA SER PHE SER SEQRES 5 E 205 THR PHE LYS CYS TYR GLY VAL SER PRO THR LYS LEU ASN SEQRES 6 E 205 ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SER PHE VAL SEQRES 7 E 205 ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN SEQRES 8 E 205 THR GLY LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP SEQRES 9 E 205 ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SER ASN ASN SEQRES 10 E 205 LEU ASP SER LYS VAL GLY GLY ASN TYR ASN TYR LEU TYR SEQRES 11 E 205 ARG LEU PHE ARG LYS SER ASN LEU LYS PRO PHE GLU ARG SEQRES 12 E 205 ASP ILE SER THR GLU ILE TYR GLN ALA GLY SER THR PRO SEQRES 13 E 205 CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU SEQRES 14 E 205 GLN SER TYR GLY PHE GLN PRO THR ASN GLY VAL GLY TYR SEQRES 15 E 205 GLN PRO TYR ARG VAL VAL VAL LEU SER PHE GLU LEU LEU SEQRES 16 E 205 HIS ALA PRO ALA THR VAL CYS GLY LYS LYS SEQRES 1 A 224 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 A 224 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 224 LEU THR VAL SER SER ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 A 224 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER VAL ILE TYR SEQRES 5 A 224 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 A 224 ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 A 224 TYR LEU GLN MET ASN SER LEU GLY ALA GLU ASP THR ALA SEQRES 8 A 224 VAL TYR TYR CYS ALA ARG GLY GLU GLY SER PRO GLY ASN SEQRES 9 A 224 TRP PHE ASP PRO TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 A 224 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 A 224 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 A 224 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 A 224 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 A 224 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 A 224 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 A 224 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 A 224 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 18 A 224 CYS ASP LYS SEQRES 1 B 214 ASP VAL VAL MET THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 B 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 214 GLN SER VAL PRO SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 B 214 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 B 214 SER THR ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 B 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 B 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN HIS SEQRES 8 B 214 TYR ASP THR SER PRO ARG PHE GLY GLY GLY THR LYS VAL SEQRES 9 B 214 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 B 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 B 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 B 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 B 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 B 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 B 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 B 214 PHE ASN ARG GLY GLU CYS SEQRES 1 H 228 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 228 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 228 TYR ILE PHE ILE ARG TYR GLY ILE SER TRP VAL ARG GLN SEQRES 4 H 228 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE SER SEQRES 5 H 228 ALA ASN ASN GLY TYR THR ASN TYR ALA GLN LYS LEU GLN SEQRES 6 H 228 GLY ARG VAL THR MET THR THR ASP THR SER THR SER THR SEQRES 7 H 228 ALA TYR MET GLU LEU ARG SER LEU ARG SER ASP ASP THR SEQRES 8 H 228 ALA VAL TYR TYR CYS ALA ARG ASP GLY GLY ILE LEU THR SEQRES 9 H 228 GLY TYR LEU ASP TYR PHE ASP HIS TRP GLY GLN GLY THR SEQRES 10 H 228 LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 H 228 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 H 228 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 H 228 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 H 228 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 H 228 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 H 228 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 H 228 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 H 228 GLU PRO LYS SER CYS ASP LYS SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG LEU THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN SER ILE ALA SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 215 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA THR TYR HIS CYS GLN GLN SER SEQRES 8 L 215 TYR SER THR LEU GLY ILE THR PHE GLY PRO GLY THR LYS SEQRES 9 L 215 VAL ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET GOL E 901 6 HET CL E 902 1 HET CL E 903 1 HET CL A 301 1 HET GOL B 301 6 HET CL B 302 1 HET PG4 H 301 13 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 6 FUC C6 H12 O5 FORMUL 7 GOL 2(C3 H8 O3) FORMUL 8 CL 4(CL 1-) FORMUL 13 PG4 C8 H18 O5 FORMUL 14 HOH *149(H2 O) HELIX 1 AA1 PRO E 337 ASN E 343 1 7 HELIX 2 AA2 SER E 349 TRP E 353 5 5 HELIX 3 AA3 ASP E 364 ASN E 370 1 7 HELIX 4 AA4 SER E 383 ASN E 388 1 6 HELIX 5 AA5 ASP E 405 ILE E 410 5 6 HELIX 6 AA6 GLY E 416 ASN E 422 1 7 HELIX 7 AA7 SER E 438 SER E 443 1 6 HELIX 8 AA8 GLY E 502 TYR E 505 5 4 HELIX 9 AA9 THR A 28 ASN A 32 5 5 HELIX 10 AB1 GLY A 86 THR A 90 5 5 HELIX 11 AB2 SER A 193 LEU A 195 5 3 HELIX 12 AB3 LYS A 207 ASN A 210 5 4 HELIX 13 AB4 PRO B 30 SER B 32 5 3 HELIX 14 AB5 GLU B 80 PHE B 84 5 5 HELIX 15 AB6 SER B 121 LYS B 126 1 6 HELIX 16 AB7 LYS B 183 GLU B 187 1 5 HELIX 17 AB8 GLN H 62 GLN H 65 5 4 HELIX 18 AB9 ARG H 87 THR H 91 5 5 HELIX 19 AC1 SER H 166 ALA H 168 5 3 HELIX 20 AC2 LYS H 211 ASN H 214 5 4 HELIX 21 AC3 GLN L 79 PHE L 83 5 5 HELIX 22 AC4 SER L 122 LYS L 127 1 6 HELIX 23 AC5 LYS L 184 LYS L 189 1 6 SHEET 1 AA1 5 ASN E 354 ILE E 358 0 SHEET 2 AA1 5 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AA1 5 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AA1 5 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA1 5 THR E 376 TYR E 380 -1 N TYR E 380 O GLY E 431 SHEET 1 AA2 3 CYS E 361 ALA E 363 0 SHEET 2 AA2 3 VAL E 524 GLY E 526 1 O CYS E 525 N ALA E 363 SHEET 3 AA2 3 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AA3 2 LEU E 452 ARG E 454 0 SHEET 2 AA3 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AA4 2 TYR E 473 GLN E 474 0 SHEET 2 AA4 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA5 4 GLN A 3 SER A 7 0 SHEET 2 AA5 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA5 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA5 4 PHE A 67 ASP A 72 -1 N SER A 70 O TYR A 79 SHEET 1 AA6 6 GLY A 10 ILE A 12 0 SHEET 2 AA6 6 THR A 113 VAL A 117 1 O LEU A 114 N GLY A 10 SHEET 3 AA6 6 ALA A 91 ARG A 97 -1 N TYR A 93 O THR A 113 SHEET 4 AA6 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 94 SHEET 5 AA6 6 LEU A 45 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA6 6 THR A 57 TYR A 59 -1 O PHE A 58 N VAL A 50 SHEET 1 AA7 4 SER A 126 LEU A 130 0 SHEET 2 AA7 4 THR A 141 TYR A 151 -1 O LEU A 147 N PHE A 128 SHEET 3 AA7 4 TYR A 182 PRO A 191 -1 O TYR A 182 N TYR A 151 SHEET 4 AA7 4 VAL A 169 THR A 171 -1 N HIS A 170 O VAL A 187 SHEET 1 AA8 4 SER A 126 LEU A 130 0 SHEET 2 AA8 4 THR A 141 TYR A 151 -1 O LEU A 147 N PHE A 128 SHEET 3 AA8 4 TYR A 182 PRO A 191 -1 O TYR A 182 N TYR A 151 SHEET 4 AA8 4 VAL A 175 LEU A 176 -1 N VAL A 175 O SER A 183 SHEET 1 AA9 3 THR A 157 TRP A 160 0 SHEET 2 AA9 3 ILE A 201 HIS A 206 -1 O ASN A 203 N SER A 159 SHEET 3 AA9 3 THR A 211 LYS A 216 -1 O THR A 211 N HIS A 206 SHEET 1 AB1 3 MET B 4 SER B 7 0 SHEET 2 AB1 3 ALA B 19 VAL B 29 -1 O ARG B 24 N THR B 5 SHEET 3 AB1 3 PHE B 63 ILE B 76 -1 O LEU B 74 N LEU B 21 SHEET 1 AB2 6 THR B 10 LEU B 13 0 SHEET 2 AB2 6 THR B 102 ILE B 106 1 O ASP B 105 N LEU B 11 SHEET 3 AB2 6 ALA B 85 TYR B 92 -1 N ALA B 85 O VAL B 104 SHEET 4 AB2 6 LEU B 34 GLN B 39 -1 N TYR B 37 O TYR B 88 SHEET 5 AB2 6 ARG B 46 TYR B 50 -1 O ILE B 49 N TRP B 36 SHEET 6 AB2 6 THR B 54 ARG B 55 -1 O THR B 54 N TYR B 50 SHEET 1 AB3 4 THR B 10 LEU B 13 0 SHEET 2 AB3 4 THR B 102 ILE B 106 1 O ASP B 105 N LEU B 11 SHEET 3 AB3 4 ALA B 85 TYR B 92 -1 N ALA B 85 O VAL B 104 SHEET 4 AB3 4 PRO B 96 PHE B 98 -1 O ARG B 97 N HIS B 91 SHEET 1 AB4 4 SER B 114 PHE B 118 0 SHEET 2 AB4 4 THR B 129 PHE B 139 -1 O LEU B 135 N PHE B 116 SHEET 3 AB4 4 TYR B 173 SER B 182 -1 O LEU B 175 N LEU B 136 SHEET 4 AB4 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB5 4 ALA B 153 GLN B 155 0 SHEET 2 AB5 4 LYS B 145 VAL B 150 -1 N TRP B 148 O GLN B 155 SHEET 3 AB5 4 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB5 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AB6 4 GLN H 3 GLN H 6 0 SHEET 2 AB6 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AB6 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AB6 4 VAL H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AB7 6 GLU H 10 LYS H 12 0 SHEET 2 AB7 6 THR H 117 VAL H 121 1 O LEU H 118 N GLU H 10 SHEET 3 AB7 6 ALA H 92 ASP H 99 -1 N TYR H 94 O THR H 117 SHEET 4 AB7 6 GLY H 33 GLN H 39 -1 N SER H 35 O ALA H 97 SHEET 5 AB7 6 GLU H 46 SER H 52 -1 O MET H 48 N TRP H 36 SHEET 6 AB7 6 THR H 58 TYR H 60 -1 O ASN H 59 N TRP H 50 SHEET 1 AB8 4 GLU H 10 LYS H 12 0 SHEET 2 AB8 4 THR H 117 VAL H 121 1 O LEU H 118 N GLU H 10 SHEET 3 AB8 4 ALA H 92 ASP H 99 -1 N TYR H 94 O THR H 117 SHEET 4 AB8 4 PHE H 110 TRP H 113 -1 O HIS H 112 N ARG H 98 SHEET 1 AB9 4 SER H 130 LEU H 134 0 SHEET 2 AB9 4 THR H 145 TYR H 155 -1 O LEU H 151 N PHE H 132 SHEET 3 AB9 4 TYR H 186 PRO H 195 -1 O VAL H 194 N ALA H 146 SHEET 4 AB9 4 VAL H 173 THR H 175 -1 N HIS H 174 O VAL H 191 SHEET 1 AC1 4 SER H 130 LEU H 134 0 SHEET 2 AC1 4 THR H 145 TYR H 155 -1 O LEU H 151 N PHE H 132 SHEET 3 AC1 4 TYR H 186 PRO H 195 -1 O VAL H 194 N ALA H 146 SHEET 4 AC1 4 VAL H 179 LEU H 180 -1 N VAL H 179 O SER H 187 SHEET 1 AC2 3 THR H 161 TRP H 164 0 SHEET 2 AC2 3 ILE H 205 HIS H 210 -1 O ASN H 207 N SER H 163 SHEET 3 AC2 3 THR H 215 LYS H 220 -1 O THR H 215 N HIS H 210 SHEET 1 AC3 4 MET L 4 SER L 7 0 SHEET 2 AC3 4 LEU L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AC3 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AC3 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AC4 6 SER L 10 ALA L 13 0 SHEET 2 AC4 6 THR L 103 ILE L 107 1 O LYS L 104 N LEU L 11 SHEET 3 AC4 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AC4 6 LEU L 33 GLN L 38 -1 N TYR L 36 O HIS L 87 SHEET 5 AC4 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AC4 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AC5 4 SER L 10 ALA L 13 0 SHEET 2 AC5 4 THR L 103 ILE L 107 1 O LYS L 104 N LEU L 11 SHEET 3 AC5 4 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AC5 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 90 SHEET 1 AC6 4 SER L 115 PHE L 119 0 SHEET 2 AC6 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AC6 4 TYR L 174 SER L 183 -1 O LEU L 176 N LEU L 137 SHEET 4 AC6 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AC7 3 ALA L 145 VAL L 151 0 SHEET 2 AC7 3 VAL L 192 HIS L 199 -1 O GLU L 196 N GLN L 148 SHEET 3 AC7 3 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SSBOND 1 CYS E 336 CYS E 361 1555 1555 2.03 SSBOND 2 CYS E 379 CYS E 432 1555 1555 2.04 SSBOND 3 CYS E 391 CYS E 525 1555 1555 2.04 SSBOND 4 CYS E 480 CYS E 488 1555 1555 2.04 SSBOND 5 CYS A 22 CYS A 95 1555 1555 2.04 SSBOND 6 CYS A 146 CYS A 202 1555 1555 2.03 SSBOND 7 CYS B 23 CYS B 89 1555 1555 2.04 SSBOND 8 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 9 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 10 CYS H 150 CYS H 206 1555 1555 2.03 SSBOND 11 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 12 CYS L 135 CYS L 195 1555 1555 2.03 LINK ND2 ASN E 343 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.43 CISPEP 1 ASP A 107 PRO A 108 0 -2.72 CISPEP 2 PHE A 152 PRO A 153 0 -2.31 CISPEP 3 GLU A 154 PRO A 155 0 1.94 CISPEP 4 SER B 7 PRO B 8 0 -3.49 CISPEP 5 TYR B 140 PRO B 141 0 3.83 CISPEP 6 PHE H 156 PRO H 157 0 -5.12 CISPEP 7 GLU H 158 PRO H 159 0 -4.11 CISPEP 8 SER L 7 PRO L 8 0 -5.21 CISPEP 9 TYR L 141 PRO L 142 0 2.83 CRYST1 70.730 114.470 177.930 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014138 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005620 0.00000