HEADER RIBOSOMAL PROTEIN 08-JUN-21 7OS7 TITLE CIRCULAR PERMUTANT OF RIBOSOMAL PROTEIN S6, SWAP HELIX 2, L75A, A92K TITLE 2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S6,30S RIBOSOMAL PROTEIN S6; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TS9,TS9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS (STRAIN HB8 / ATCC 27634 / SOURCE 3 DSM 579); SOURCE 4 ORGANISM_TAXID: 300852; SOURCE 5 STRAIN: HB8 / ATCC 27634 / DSM 579; SOURCE 6 GENE: RPSF, TTHA0245; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS CIRCULAR PERMUTANT, NATIVE STACKING, , DESIGNED AMYLOID FIBRIL, KEYWDS 2 RIBOSOMAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.WANG,D.T.LOGAN,M.OLIVEBERG REVDAT 2 31-JAN-24 7OS7 1 REMARK REVDAT 1 22-JUN-22 7OS7 0 JRNL AUTH H.WANG,D.T.LOGAN,M.OLIVEBERG JRNL TITL CIRCULAR PERMUTANT OF RIBOSOMAL PROTEIN S6, SWAP HELIX 2, JRNL TITL 2 L75A, A92K MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1468 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1990 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1706 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.23000 REMARK 3 B22 (A**2) : 1.23000 REMARK 3 B33 (A**2) : -2.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.330 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1737 ; 0.014 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1687 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2350 ; 1.696 ; 1.659 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3883 ; 1.386 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 206 ; 6.245 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;28.987 ;20.407 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 327 ;15.889 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;14.445 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 215 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1959 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 387 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3424 ; 6.665 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0331 -3.6445 -16.4925 REMARK 3 T TENSOR REMARK 3 T11: 0.0961 T22: 0.0125 REMARK 3 T33: 0.0909 T12: 0.0079 REMARK 3 T13: 0.0110 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.5889 L22: 0.0235 REMARK 3 L33: 0.7325 L12: -0.0712 REMARK 3 L13: -0.0736 L23: 0.0848 REMARK 3 S TENSOR REMARK 3 S11: -0.0508 S12: -0.0120 S13: 0.0170 REMARK 3 S21: 0.0073 S22: 0.0102 S23: 0.0263 REMARK 3 S31: 0.0452 S32: 0.0935 S33: 0.0406 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): 32.1525 -0.4543 1.5789 REMARK 3 T TENSOR REMARK 3 T11: 0.0582 T22: 0.1497 REMARK 3 T33: 0.0272 T12: 0.0191 REMARK 3 T13: 0.0001 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 0.3088 L22: 1.0078 REMARK 3 L33: 2.4589 L12: -0.2865 REMARK 3 L13: 0.5493 L23: 0.4994 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: 0.0979 S13: -0.0317 REMARK 3 S21: -0.0024 S22: 0.0203 S23: 0.0584 REMARK 3 S31: 0.0984 S32: 0.4300 S33: -0.0398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7OS7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292113267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97996 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29194 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 148.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 1.28800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1RIS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CITRATE DIBASIC 14% W/V REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.28050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.82300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.82300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.42075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.82300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.82300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.14025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.82300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.82300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 111.42075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.82300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.82300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.14025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 74.28050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 ASP A 2 REMARK 465 ARG A 3 REMARK 465 GLU B 1 REMARK 465 ASP B 2 REMARK 465 ARG B 3 REMARK 465 VAL B 4 REMARK 465 ASN B 5 REMARK 465 ASP B 6 REMARK 465 ALA B 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ARG A 18 O HOH A 201 2.08 REMARK 500 O HOH A 203 O HOH A 248 2.13 REMARK 500 OE1 GLU A 69 O HOH A 202 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 58 CD GLU A 58 OE2 0.087 REMARK 500 GLU A 105 CD GLU A 105 OE1 0.179 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 18 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 79.63 -167.53 REMARK 500 ASN A 38 123.32 -37.29 REMARK 500 ASP B 15 60.24 32.17 REMARK 500 ASN B 38 115.07 -31.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 7OS7 A 1 24 UNP Q5SLP8 RS6_THET8 69 92 DBREF 7OS7 A 30 108 UNP Q5SLP8 RS6_THET8 3 81 DBREF 7OS7 B 1 24 UNP Q5SLP8 RS6_THET8 69 92 DBREF 7OS7 B 30 108 UNP Q5SLP8 RS6_THET8 3 81 SEQADV 7OS7 ALA A 7 UNP Q5SLP8 LEU 75 ENGINEERED MUTATION SEQADV 7OS7 SER A 25 UNP Q5SLP8 LINKER SEQADV 7OS7 THR A 26 UNP Q5SLP8 LINKER SEQADV 7OS7 THR A 27 UNP Q5SLP8 LINKER SEQADV 7OS7 PRO A 28 UNP Q5SLP8 LINKER SEQADV 7OS7 GLY A 29 UNP Q5SLP8 LINKER SEQADV 7OS7 ALA B 7 UNP Q5SLP8 LEU 75 ENGINEERED MUTATION SEQADV 7OS7 SER B 25 UNP Q5SLP8 LINKER SEQADV 7OS7 THR B 26 UNP Q5SLP8 LINKER SEQADV 7OS7 THR B 27 UNP Q5SLP8 LINKER SEQADV 7OS7 PRO B 28 UNP Q5SLP8 LINKER SEQADV 7OS7 GLY B 29 UNP Q5SLP8 LINKER SEQRES 1 A 108 GLU ASP ARG VAL ASN ASP ALA ALA ARG GLU LEU ARG ILE SEQRES 2 A 108 ARG ASP ASN VAL ARG ARG VAL MET VAL VAL LYS SER THR SEQRES 3 A 108 THR PRO GLY ARG TYR GLU VAL ASN ILE VAL LEU ASN PRO SEQRES 4 A 108 ASN LEU ASP GLN SER GLN LEU ALA LEU GLU LYS GLU ILE SEQRES 5 A 108 ILE GLN ARG ALA LEU GLU ASN TYR GLY ALA ARG VAL GLU SEQRES 6 A 108 LYS VAL GLU GLU LEU GLY LEU ARG ARG LEU ALA TYR PRO SEQRES 7 A 108 ILE ALA LYS ASP PRO GLN GLY TYR PHE LEU TRP TYR GLN SEQRES 8 A 108 VAL GLU MET PRO GLU ASP ARG VAL ASN ASP LEU ALA ARG SEQRES 9 A 108 GLU LEU ARG ILE SEQRES 1 B 108 GLU ASP ARG VAL ASN ASP ALA ALA ARG GLU LEU ARG ILE SEQRES 2 B 108 ARG ASP ASN VAL ARG ARG VAL MET VAL VAL LYS SER THR SEQRES 3 B 108 THR PRO GLY ARG TYR GLU VAL ASN ILE VAL LEU ASN PRO SEQRES 4 B 108 ASN LEU ASP GLN SER GLN LEU ALA LEU GLU LYS GLU ILE SEQRES 5 B 108 ILE GLN ARG ALA LEU GLU ASN TYR GLY ALA ARG VAL GLU SEQRES 6 B 108 LYS VAL GLU GLU LEU GLY LEU ARG ARG LEU ALA TYR PRO SEQRES 7 B 108 ILE ALA LYS ASP PRO GLN GLY TYR PHE LEU TRP TYR GLN SEQRES 8 B 108 VAL GLU MET PRO GLU ASP ARG VAL ASN ASP LEU ALA ARG SEQRES 9 B 108 GLU LEU ARG ILE FORMUL 3 HOH *94(H2 O) HELIX 1 AA1 ASN A 5 ARG A 14 1 10 HELIX 2 AA2 ASP A 42 TYR A 60 1 19 HELIX 3 AA3 PRO A 95 LEU A 106 1 12 HELIX 4 AA4 ARG B 9 ASP B 15 1 7 HELIX 5 AA5 ASP B 42 TYR B 60 1 19 HELIX 6 AA6 PRO B 95 ASP B 97 5 3 HELIX 7 AA7 ARG B 98 ILE B 108 1 11 SHEET 1 AA1 8 ARG A 63 ILE A 79 0 SHEET 2 AA1 8 ASP A 82 GLU A 93 -1 O TRP A 89 N GLU A 68 SHEET 3 AA1 8 ARG A 30 LEU A 37 -1 N VAL A 33 O TYR A 90 SHEET 4 AA1 8 VAL A 17 LYS A 24 -1 N ARG A 18 O VAL A 36 SHEET 5 AA1 8 ARG B 63 ILE B 79 1 O GLU B 69 N VAL A 20 SHEET 6 AA1 8 ASP B 82 GLU B 93 -1 O GLN B 91 N GLU B 65 SHEET 7 AA1 8 ARG B 30 LEU B 37 -1 N VAL B 33 O TYR B 90 SHEET 8 AA1 8 VAL B 17 LYS B 24 -1 N VAL B 23 O GLU B 32 CRYST1 55.646 55.646 148.561 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017971 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006731 0.00000