data_7OW0 # _entry.id 7OW0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.358 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7OW0 pdb_00007ow0 10.2210/pdb7ow0/pdb WWPDB D_1292116438 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7OW0 _pdbx_database_status.recvd_initial_deposition_date 2021-06-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Dolot, R.M.' 1 0000-0002-2300-5264 'Maciaszek, A.' 2 0000-0001-8855-7548 'Nawrot, B.C.' 3 0000-0002-4084-4334 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Crystals _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2073-4352 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;First High-Resolution Crystal Structures of DNA:2'-O-Methyl-RNA Heteroduplexes ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/cryst12060760 _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dolot, R.' 1 ? primary 'Maciaszek, A.' 2 ? primary 'Mikolajczyk, B.' 3 ? primary 'Nawrot, B.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7OW0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 31.850 _cell.length_a_esd ? _cell.length_b 31.850 _cell.length_b_esd ? _cell.length_c 91.660 _cell.length_c_esd ? _cell.volume 92981.966 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OW0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*CP*TP*CP*CP*TP*AP*GP*G)-3') ; 2706.785 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*(OMC)P*(OMU)P*(A2M)P*(OMG)P*(OMG)P*(A2M)P*(OMG)P*(A2M)P*(OMC))-3') ; 3021.045 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 water nat water 18.015 92 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DC)(DC)(DT)(DA)(DG)(DG)' TCTCCTAGG A ? 2 polydeoxyribonucleotide no yes '(OMC)(OMU)(A2M)(OMG)(OMG)(A2M)(OMG)(A2M)(OMC)' CUAGGAGAC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DT n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DG n 2 1 OMC n 2 2 OMU n 2 3 A2M n 2 4 OMG n 2 5 OMG n 2 6 A2M n 2 7 OMG n 2 8 A2M n 2 9 OMC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7OW0 7OW0 ? 1 ? 1 2 PDB 7OW0 7OW0 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7OW0 A 1 ? 9 ? 7OW0 1 ? 9 ? 1 9 2 2 7OW0 B 1 ? 9 ? 7OW0 1 ? 9 ? 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2M 'RNA linking' n ;2'-O-methyladenosine 5'-(dihydrogen phosphate) ; ? 'C11 H16 N5 O7 P' 361.248 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 OMG 'RNA linking' n "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O8 P' 377.247 OMU 'RNA linking' n ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7OW0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.38 _exptl_crystal.description prism _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.8 M Li2SO4, 50 mM Na cacodylate pH 6.5, 5 mM spermine, 50 mM ZnCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-03-07 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'DCM Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.28308 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.28308 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 19.82 _reflns.entry_id 7OW0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 31.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12966 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.03 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.92 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.99 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.053 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.64 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.96 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1979 _reflns_shell.percent_possible_all 94.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.586 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.36 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.696 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.771 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 24.30 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7OW0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.55 _refine.ls_d_res_low 30.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12953 _refine.ls_number_reflns_R_free 1298 _refine.ls_number_reflns_R_work 11655 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.83 _refine.ls_percent_reflns_R_free 10.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2241 _refine.ls_R_factor_R_free 0.2508 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2211 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.94 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.5899 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1738 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 30.09 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 475 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 380 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0032 ? 423 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6241 ? 648 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0257 ? 71 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0018 ? 129 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 9.7166 ? 273 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.55 1.61 . . 137 1215 93.31 . . . 0.3467 . 0.3206 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.61 1.68 . . 146 1281 97.74 . . . 0.3095 . 0.2953 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.68 1.77 . . 148 1306 99.45 . . . 0.3297 . 0.2684 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.77 1.88 . . 150 1305 100.00 . . . 0.2960 . 0.2428 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.88 2.03 . . 137 1302 100.00 . . . 0.2799 . 0.2543 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.03 2.23 . . 150 1321 99.93 . . . 0.2650 . 0.2693 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.23 2.55 . . 144 1305 100.00 . . . 0.2709 . 0.2381 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.56 3.22 . . 144 1316 99.52 . . . 0.2684 . 0.2414 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.22 30.09 . . 142 1304 99.45 . . . 0.1900 . 0.1600 . . . . . . . . . . . # _struct.entry_id 7OW0 _struct.title ;1.55 A crystal structure of DNA/2'-O-methyl-RNA heteroduplex with overhangs solved by Zn-SAD. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7OW0 _struct_keywords.text ;DNA/2'-O-methyl-RNA, duplex, heteroduplex, Zn-SAD, DNA-RNA HYBRID ; _struct_keywords.pdbx_keywords 'DNA-RNA HYBRID' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B OMC 1 "O3'" ? ? ? 1_555 B OMU 2 P ? ? B OMC 1 B OMU 2 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? B OMU 2 "O3'" ? ? ? 1_555 B A2M 3 P ? ? B OMU 2 B A2M 3 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale one ? B A2M 3 "O3'" ? ? ? 1_555 B OMG 4 P ? ? B A2M 3 B OMG 4 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale4 covale both ? B OMG 4 "O3'" ? ? ? 1_555 B OMG 5 P ? ? B OMG 4 B OMG 5 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale5 covale both ? B OMG 5 "O3'" ? ? ? 1_555 B A2M 6 P ? ? B OMG 5 B A2M 6 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale6 covale one ? B A2M 6 "O3'" ? ? ? 1_555 B OMG 7 P ? ? B A2M 6 B OMG 7 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale7 covale both ? B OMG 7 "O3'" ? ? ? 1_555 B A2M 8 P ? ? B OMG 7 B A2M 8 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale8 covale one ? B A2M 8 "O3'" ? ? ? 1_555 B OMC 9 P ? ? B A2M 8 B OMC 9 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A DG 8 N7 ? ? ? 1_555 C ZN . ZN ? ? A DG 8 A ZN 101 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc2 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 203 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc3 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 225 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 230 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 233 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 244 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc7 metalc ? ? B OMG 4 N7 ? ? ? 1_555 D ZN . ZN ? ? B OMG 4 B ZN 101 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc8 metalc ? ? B OMG 7 N7 ? ? ? 1_555 E ZN . ZN ? ? B OMG 7 B ZN 102 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc9 metalc ? ? D ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 101 B HOH 203 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc10 metalc ? ? D ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 101 B HOH 210 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc11 metalc ? ? D ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 101 B HOH 226 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc12 metalc ? ? D ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 101 B HOH 234 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc13 metalc ? ? D ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 101 B HOH 243 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc14 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 102 B HOH 214 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc15 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 102 B HOH 219 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc16 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 102 B HOH 222 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc17 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? B ZN 102 B HOH 240 1_555 ? ? ? ? ? ? ? 2.341 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B A2M 8 N1 ? ? A DT 1 B A2M 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B A2M 8 N6 ? ? A DT 1 B A2M 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B OMG 7 N1 ? ? A DC 2 B OMG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B OMG 7 O6 ? ? A DC 2 B OMG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B OMG 7 N2 ? ? A DC 2 B OMG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B A2M 6 N1 ? ? A DT 3 B A2M 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B A2M 6 N6 ? ? A DT 3 B A2M 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B OMG 5 N1 ? ? A DC 4 B OMG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B OMG 5 O6 ? ? A DC 4 B OMG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B OMG 5 N2 ? ? A DC 4 B OMG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B OMG 4 N1 ? ? A DC 5 B OMG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B OMG 4 O6 ? ? A DC 5 B OMG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B OMG 4 N2 ? ? A DC 5 B OMG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B A2M 3 N1 ? ? A DT 6 B A2M 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B A2M 3 N6 ? ? A DT 6 B A2M 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B OMU 2 N3 ? ? A DA 7 B OMU 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B OMU 2 O4 ? ? A DA 7 B OMU 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B OMC 1 N3 ? ? A DG 8 B OMC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B OMC 1 O2 ? ? A DG 8 B OMC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B OMC 1 N4 ? ? A DG 8 B OMC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _atom_sites.entry_id 7OW0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.031397 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031397 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010910 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n B 2 1 OMC 1 1 1 OMC OMC B . n B 2 2 OMU 2 2 2 OMU OMU B . n B 2 3 A2M 3 3 3 A2M A2M B . n B 2 4 OMG 4 4 4 OMG OMG B . n B 2 5 OMG 5 5 5 OMG OMG B . n B 2 6 A2M 6 6 6 A2M A2M B . n B 2 7 OMG 7 7 7 OMG OMG B . n B 2 8 A2M 8 8 8 A2M A2M B . n B 2 9 OMC 9 9 9 OMC OMC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 101 1 ZN ZN A . D 3 ZN 1 101 2 ZN ZN B . E 3 ZN 1 102 3 ZN ZN B . F 4 HOH 1 201 19 HOH HOH A . F 4 HOH 2 202 45 HOH HOH A . F 4 HOH 3 203 4 HOH HOH A . F 4 HOH 4 204 51 HOH HOH A . F 4 HOH 5 205 8 HOH HOH A . F 4 HOH 6 206 32 HOH HOH A . F 4 HOH 7 207 30 HOH HOH A . F 4 HOH 8 208 41 HOH HOH A . F 4 HOH 9 209 52 HOH HOH A . F 4 HOH 10 210 2 HOH HOH A . F 4 HOH 11 211 54 HOH HOH A . F 4 HOH 12 212 10 HOH HOH A . F 4 HOH 13 213 75 HOH HOH A . F 4 HOH 14 214 5 HOH HOH A . F 4 HOH 15 215 18 HOH HOH A . F 4 HOH 16 216 28 HOH HOH A . F 4 HOH 17 217 40 HOH HOH A . F 4 HOH 18 218 68 HOH HOH A . F 4 HOH 19 219 57 HOH HOH A . F 4 HOH 20 220 88 HOH HOH A . F 4 HOH 21 221 1 HOH HOH A . F 4 HOH 22 222 38 HOH HOH A . F 4 HOH 23 223 67 HOH HOH A . F 4 HOH 24 224 49 HOH HOH A . F 4 HOH 25 225 14 HOH HOH A . F 4 HOH 26 226 9 HOH HOH A . F 4 HOH 27 227 29 HOH HOH A . F 4 HOH 28 228 13 HOH HOH A . F 4 HOH 29 229 16 HOH HOH A . F 4 HOH 30 230 6 HOH HOH A . F 4 HOH 31 231 46 HOH HOH A . F 4 HOH 32 232 53 HOH HOH A . F 4 HOH 33 233 70 HOH HOH A . F 4 HOH 34 234 17 HOH HOH A . F 4 HOH 35 235 44 HOH HOH A . F 4 HOH 36 236 76 HOH HOH A . F 4 HOH 37 237 47 HOH HOH A . F 4 HOH 38 238 80 HOH HOH A . F 4 HOH 39 239 83 HOH HOH A . F 4 HOH 40 240 90 HOH HOH A . F 4 HOH 41 241 66 HOH HOH A . F 4 HOH 42 242 77 HOH HOH A . F 4 HOH 43 243 71 HOH HOH A . F 4 HOH 44 244 7 HOH HOH A . F 4 HOH 45 245 72 HOH HOH A . F 4 HOH 46 246 89 HOH HOH A . F 4 HOH 47 247 69 HOH HOH A . G 4 HOH 1 201 3 HOH HOH B . G 4 HOH 2 202 86 HOH HOH B . G 4 HOH 3 203 61 HOH HOH B . G 4 HOH 4 204 82 HOH HOH B . G 4 HOH 5 205 92 HOH HOH B . G 4 HOH 6 206 43 HOH HOH B . G 4 HOH 7 207 59 HOH HOH B . G 4 HOH 8 208 56 HOH HOH B . G 4 HOH 9 209 11 HOH HOH B . G 4 HOH 10 210 73 HOH HOH B . G 4 HOH 11 211 24 HOH HOH B . G 4 HOH 12 212 36 HOH HOH B . G 4 HOH 13 213 37 HOH HOH B . G 4 HOH 14 214 20 HOH HOH B . G 4 HOH 15 215 27 HOH HOH B . G 4 HOH 16 216 21 HOH HOH B . G 4 HOH 17 217 63 HOH HOH B . G 4 HOH 18 218 85 HOH HOH B . G 4 HOH 19 219 74 HOH HOH B . G 4 HOH 20 220 58 HOH HOH B . G 4 HOH 21 221 23 HOH HOH B . G 4 HOH 22 222 12 HOH HOH B . G 4 HOH 23 223 34 HOH HOH B . G 4 HOH 24 224 15 HOH HOH B . G 4 HOH 25 225 64 HOH HOH B . G 4 HOH 26 226 26 HOH HOH B . G 4 HOH 27 227 35 HOH HOH B . G 4 HOH 28 228 39 HOH HOH B . G 4 HOH 29 229 60 HOH HOH B . G 4 HOH 30 230 22 HOH HOH B . G 4 HOH 31 231 33 HOH HOH B . G 4 HOH 32 232 31 HOH HOH B . G 4 HOH 33 233 62 HOH HOH B . G 4 HOH 34 234 42 HOH HOH B . G 4 HOH 35 235 55 HOH HOH B . G 4 HOH 36 236 50 HOH HOH B . G 4 HOH 37 237 78 HOH HOH B . G 4 HOH 38 238 84 HOH HOH B . G 4 HOH 39 239 87 HOH HOH B . G 4 HOH 40 240 48 HOH HOH B . G 4 HOH 41 241 79 HOH HOH B . G 4 HOH 42 242 65 HOH HOH B . G 4 HOH 43 243 25 HOH HOH B . G 4 HOH 44 244 91 HOH HOH B . G 4 HOH 45 245 81 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 236 ? F HOH . 2 1 B HOH 220 ? G HOH . 3 1 B HOH 241 ? G HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 8 ? A DG 8 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 203 ? 1_555 86.4 ? 2 N7 ? A DG 8 ? A DG 8 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 225 ? 1_555 87.5 ? 3 O ? F HOH . ? A HOH 203 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 225 ? 1_555 97.0 ? 4 N7 ? A DG 8 ? A DG 8 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 230 ? 1_555 97.0 ? 5 O ? F HOH . ? A HOH 203 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 230 ? 1_555 88.8 ? 6 O ? F HOH . ? A HOH 225 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 230 ? 1_555 173.0 ? 7 N7 ? A DG 8 ? A DG 8 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 233 ? 1_555 96.3 ? 8 O ? F HOH . ? A HOH 203 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 233 ? 1_555 175.8 ? 9 O ? F HOH . ? A HOH 225 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 233 ? 1_555 86.4 ? 10 O ? F HOH . ? A HOH 230 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 233 ? 1_555 87.7 ? 11 N7 ? A DG 8 ? A DG 8 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 175.7 ? 12 O ? F HOH . ? A HOH 203 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 89.5 ? 13 O ? F HOH . ? A HOH 225 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 92.2 ? 14 O ? F HOH . ? A HOH 230 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 83.8 ? 15 O ? F HOH . ? A HOH 233 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 87.9 ? 16 N7 ? B OMG 4 ? B OMG 4 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 203 ? 1_555 97.5 ? 17 N7 ? B OMG 4 ? B OMG 4 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 210 ? 1_555 90.8 ? 18 O ? G HOH . ? B HOH 203 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 210 ? 1_555 85.1 ? 19 N7 ? B OMG 4 ? B OMG 4 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 226 ? 1_555 89.7 ? 20 O ? G HOH . ? B HOH 203 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 226 ? 1_555 172.7 ? 21 O ? G HOH . ? B HOH 210 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 226 ? 1_555 93.5 ? 22 N7 ? B OMG 4 ? B OMG 4 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 234 ? 1_555 92.1 ? 23 O ? G HOH . ? B HOH 203 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 234 ? 1_555 104.2 ? 24 O ? G HOH . ? B HOH 210 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 234 ? 1_555 169.8 ? 25 O ? G HOH . ? B HOH 226 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 234 ? 1_555 76.7 ? 26 N7 ? B OMG 4 ? B OMG 4 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 243 ? 1_555 176.3 ? 27 O ? G HOH . ? B HOH 203 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 243 ? 1_555 80.4 ? 28 O ? G HOH . ? B HOH 210 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 243 ? 1_555 92.1 ? 29 O ? G HOH . ? B HOH 226 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 243 ? 1_555 92.4 ? 30 O ? G HOH . ? B HOH 234 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? G HOH . ? B HOH 243 ? 1_555 85.4 ? 31 N7 ? B OMG 7 ? B OMG 7 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 214 ? 1_555 97.6 ? 32 N7 ? B OMG 7 ? B OMG 7 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 219 ? 1_555 101.9 ? 33 O ? G HOH . ? B HOH 214 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 219 ? 1_555 152.9 ? 34 N7 ? B OMG 7 ? B OMG 7 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 222 ? 1_555 84.6 ? 35 O ? G HOH . ? B HOH 214 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 222 ? 1_555 93.9 ? 36 O ? G HOH . ? B HOH 219 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 222 ? 1_555 106.4 ? 37 N7 ? B OMG 7 ? B OMG 7 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 177.1 ? 38 O ? G HOH . ? B HOH 214 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 85.3 ? 39 O ? G HOH . ? B HOH 219 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 75.3 ? 40 O ? G HOH . ? B HOH 222 ? 1_555 ZN ? E ZN . ? B ZN 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 95.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-07-14 2 'Structure model' 1 1 2022-06-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation.year' 8 2 'Structure model' '_citation_author.identifier_ORCID' 9 2 'Structure model' '_citation_author.name' 10 2 'Structure model' '_database_2.pdbx_DOI' 11 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+3/4 3 y+1/2,-x+1/2,z+1/4 4 x+1/2,-y+1/2,-z+1/4 5 -x+1/2,y+1/2,-z+3/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 4 # _pdbx_entry_details.entry_id 7OW0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _ndb_struct_conf_na.entry_id 7OW0 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B A2M 8 1_555 -0.247 0.016 -0.333 11.868 -8.701 -8.826 1 A_DT1:A2M8_B A 1 ? B 8 ? 20 1 1 A DC 2 1_555 B OMG 7 1_555 0.117 -0.110 -0.053 7.776 -7.602 1.713 2 A_DC2:OMG7_B A 2 ? B 7 ? 19 1 1 A DT 3 1_555 B A2M 6 1_555 0.003 -0.257 -0.348 13.864 -5.998 -1.154 3 A_DT3:A2M6_B A 3 ? B 6 ? 20 1 1 A DC 4 1_555 B OMG 5 1_555 0.447 -0.179 -0.328 9.642 -9.776 3.471 4 A_DC4:OMG5_B A 4 ? B 5 ? 19 1 1 A DC 5 1_555 B OMG 4 1_555 0.331 -0.168 -0.019 -0.457 -8.130 3.851 5 A_DC5:OMG4_B A 5 ? B 4 ? 19 1 1 A DT 6 1_555 B A2M 3 1_555 0.032 -0.116 -0.120 -0.782 -13.242 1.618 6 A_DT6:A2M3_B A 6 ? B 3 ? 20 1 1 A DA 7 1_555 B OMU 2 1_555 0.190 -0.117 0.308 -5.494 -16.033 -0.183 7 A_DA7:OMU2_B A 7 ? B 2 ? 20 1 1 A DG 8 1_555 B OMC 1 1_555 -0.214 -0.105 0.230 -12.030 -22.233 -2.269 8 A_DG8:OMC1_B A 8 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B A2M 8 1_555 A DC 2 1_555 B OMG 7 1_555 0.739 -1.782 3.489 -3.526 9.454 32.757 -4.491 -1.800 2.790 16.289 6.075 34.235 1 AA_DT1DC2:OMG7A2M8_BB A 1 ? B 8 ? A 2 ? B 7 ? 1 A DC 2 1_555 B OMG 7 1_555 A DT 3 1_555 B A2M 6 1_555 -0.775 -1.798 3.179 -1.121 4.766 29.059 -4.485 1.301 2.881 9.414 2.214 29.460 2 AA_DC2DT3:A2M6OMG7_BB A 2 ? B 7 ? A 3 ? B 6 ? 1 A DT 3 1_555 B A2M 6 1_555 A DC 4 1_555 B OMG 5 1_555 0.708 -1.584 3.303 1.879 10.715 35.332 -3.875 -0.877 2.756 17.159 -3.009 36.917 3 AA_DT3DC4:OMG5A2M6_BB A 3 ? B 6 ? A 4 ? B 5 ? 1 A DC 4 1_555 B OMG 5 1_555 A DC 5 1_555 B OMG 4 1_555 0.360 -2.073 3.458 0.105 9.207 31.235 -5.260 -0.625 2.753 16.651 -0.190 32.531 4 AA_DC4DC5:OMG4OMG5_BB A 4 ? B 5 ? A 5 ? B 4 ? 1 A DC 5 1_555 B OMG 4 1_555 A DT 6 1_555 B A2M 3 1_555 -1.550 -2.137 3.230 -0.418 11.307 21.870 -7.929 3.532 1.933 27.556 1.019 24.592 5 AA_DC5DT6:A2M3OMG4_BB A 5 ? B 4 ? A 6 ? B 3 ? 1 A DT 6 1_555 B A2M 3 1_555 A DA 7 1_555 B OMU 2 1_555 0.575 -1.467 3.143 -1.293 15.959 34.019 -4.090 -1.042 2.235 25.593 2.074 37.498 6 AA_DT6DA7:OMU2A2M3_BB A 6 ? B 3 ? A 7 ? B 2 ? 1 A DA 7 1_555 B OMU 2 1_555 A DG 8 1_555 B OMC 1 1_555 0.027 -1.549 3.385 2.808 5.210 34.866 -3.321 0.370 3.122 8.619 -4.644 35.350 7 AA_DA7DG8:OMC1OMU2_BB A 7 ? B 2 ? A 8 ? B 1 ? # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ZN ? ? ZN ? ? 'SUBJECT OF INVESTIGATION' ? 2 OMU ? ? OMU ? ? 'SUBJECT OF INVESTIGATION' ? 3 OMG ? ? OMG ? ? 'SUBJECT OF INVESTIGATION' ? 4 OMC ? ? OMC ? ? 'SUBJECT OF INVESTIGATION' ? 5 A2M ? ? A2M ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 43 21 2' _space_group.name_Hall 'P 4nw 2abw' _space_group.IT_number 96 _space_group.crystal_system tetragonal _space_group.id 1 #