HEADER TRANSFERASE 22-JUN-21 7OXB TITLE CRYSTAL STRUCTURE OF EGFR DOUBLE MUTANT (T790M/L858R) IN COMPLEX WITH TITLE 2 COMPOUND 6. COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, INHIBITOR, EGFR, MUTANT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.W.COLLIE REVDAT 2 13-NOV-24 7OXB 1 REMARK REVDAT 1 20-OCT-21 7OXB 0 JRNL AUTH N.HOOGENBOOM,D.DEMONT,E.DE ZWART,S.VERKAIK,M.EMMELOT, JRNL AUTH 2 B.VAN DE KAR,A.KAPTEIN,T.BARF JRNL TITL DISCOVERY AND OPTIMIZATION OF COVALENT EGFR T790M/L858R JRNL TITL 2 MUTANT INHIBITORS". JRNL REF BIOORG.MED.CHEM.LETT. 28406 2021 JRNL REFN ESSN 1464-3405 JRNL PMID 34624491 JRNL DOI 10.1016/J.BMCL.2021.128406 REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 104.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 16030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 910 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1103 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.324 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.311 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2447 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1708 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3324 ; 1.041 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4121 ; 0.964 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 301 ; 5.162 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;34.504 ;24.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;10.931 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.305 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 376 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2656 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 470 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7OXB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292116580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 104.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 11.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: UNKNOWN, VAPOR DIFFUSION, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.85750 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.85750 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.85750 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.85750 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.85750 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.85750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 147.71500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 THR A 751 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 GLU A 866 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 GLN A 1020 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 695 SD CE REMARK 480 GLU A 697 CD OE1 OE2 REMARK 480 LYS A 708 NZ REMARK 480 GLU A 709 CD OE1 OE2 REMARK 480 LYS A 713 CE NZ REMARK 480 LYS A 714 NZ REMARK 480 LYS A 716 CE NZ REMARK 480 GLU A 734 CD OE1 OE2 REMARK 480 LYS A 737 CD CE NZ REMARK 480 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 754 CG CD CE NZ REMARK 480 LYS A 757 CE NZ REMARK 480 ILE A 759 CD1 REMARK 480 ARG A 776 CD NE CZ NH1 NH2 REMARK 480 SER A 784 OG REMARK 480 GLU A 804 CD OE1 OE2 REMARK 480 LYS A 806 CE NZ REMARK 480 ARG A 832 CZ NH1 NH2 REMARK 480 LYS A 860 CE NZ REMARK 480 GLU A 872 CD OE1 OE2 REMARK 480 LYS A 875 CD CE NZ REMARK 480 ILE A 878 CD1 REMARK 480 ARG A 889 CZ NH1 NH2 REMARK 480 LYS A 913 NZ REMARK 480 ILE A 918 CD1 REMARK 480 GLU A 922 CD OE1 OE2 REMARK 480 GLU A 928 CD OE1 OE2 REMARK 480 LYS A 929 CE NZ REMARK 480 LYS A 960 CE NZ REMARK 480 GLU A 985 CD OE1 OE2 REMARK 480 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 1004 CD OE1 OE2 REMARK 480 ILE A 1018 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 837 38.29 -159.54 REMARK 500 ASP A 855 88.81 66.07 REMARK 500 LEU A 862 80.91 50.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 7OXB A 696 1020 UNP P00533 EGFR_HUMAN 696 1020 SEQADV 7OXB MET A 695 UNP P00533 INITIATING METHIONINE SEQADV 7OXB MET A 790 UNP P00533 THR 790 VARIANT SEQADV 7OXB ARG A 858 UNP P00533 LEU 858 VARIANT SEQRES 1 A 326 MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE LEU SEQRES 2 A 326 LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SER SEQRES 3 A 326 GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE PRO SEQRES 4 A 326 GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS GLU SEQRES 5 A 326 LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU ILE SEQRES 6 A 326 LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN PRO SEQRES 7 A 326 HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER THR SEQRES 8 A 326 VAL GLN LEU ILE MET GLN LEU MET PRO PHE GLY CYS LEU SEQRES 9 A 326 LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SER SEQRES 10 A 326 GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY SEQRES 11 A 326 MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG ASP SEQRES 12 A 326 LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN HIS SEQRES 13 A 326 VAL LYS ILE THR ASP PHE GLY ARG ALA LYS LEU LEU GLY SEQRES 14 A 326 ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY LYS VAL SEQRES 15 A 326 PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS ARG SEQRES 16 A 326 ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL SEQRES 17 A 326 THR VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO TYR SEQRES 18 A 326 ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU GLU SEQRES 19 A 326 LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE SEQRES 20 A 326 ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE ASP SEQRES 21 A 326 ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE GLU SEQRES 22 A 326 PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU VAL SEQRES 23 A 326 ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO THR SEQRES 24 A 326 ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU ASP SEQRES 25 A 326 MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE PRO SEQRES 26 A 326 GLN HET 35Z A1101 33 HETNAM 35Z 2-[2-(3-METHOXYPHENYL)PYRIMIDIN-4-YL]-1'-PROP-2-ENOYL- HETNAM 2 35Z SPIRO[5,6-DIHYDRO-1~{H}-PYRROLO[3,2-C]PYRIDINE-7,4'- HETNAM 3 35Z PIPERIDINE]-4-ONE FORMUL 2 35Z C25 H25 N5 O3 FORMUL 3 HOH *31(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 PRO A 753 VAL A 769 1 17 HELIX 3 AA3 CYS A 797 HIS A 805 1 9 HELIX 4 AA4 LYS A 806 ILE A 809 5 4 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 PRO A 877 MET A 881 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 PRO A 919 SER A 921 5 3 HELIX 11 AB2 GLU A 922 LYS A 929 1 8 HELIX 12 AB3 THR A 940 TRP A 951 1 12 HELIX 13 AB4 ASP A 954 ARG A 958 5 5 HELIX 14 AB5 LYS A 960 ARG A 973 1 14 HELIX 15 AB6 ASP A 974 LEU A 979 1 6 HELIX 16 AB7 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 GLY A 721 0 SHEET 2 AA1 5 GLY A 724 TRP A 731 -1 O LYS A 728 N LYS A 716 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O ILE A 740 N TRP A 731 SHEET 4 AA1 5 VAL A 786 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 LEU A 782 -1 N GLY A 779 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 LINK SG CYS A 797 C33 35Z A1101 1555 1555 1.74 CRYST1 147.715 147.715 147.715 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006770 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006770 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006770 0.00000 TER 2443 PRO A1019 HETATM 2444 C1 35Z A1101 52.624 -4.070 -16.352 1.00 65.76 C HETATM 2445 C3 35Z A1101 53.392 -2.226 -17.700 1.00 47.69 C HETATM 2446 C4 35Z A1101 52.720 -1.176 -17.074 1.00 47.85 C HETATM 2447 C5 35Z A1101 52.451 -0.009 -17.776 1.00 45.94 C HETATM 2448 C6 35Z A1101 52.846 0.130 -19.097 1.00 43.03 C HETATM 2449 C7 35Z A1101 53.532 -0.912 -19.753 1.00 41.52 C HETATM 2450 C8 35Z A1101 53.793 -2.095 -19.024 1.00 42.75 C HETATM 2451 N10 35Z A1101 54.824 -1.626 -21.767 1.00 41.50 N HETATM 2452 C11 35Z A1101 55.214 -1.485 -23.064 1.00 36.30 C HETATM 2453 C12 35Z A1101 54.727 -0.467 -23.808 1.00 37.05 C HETATM 2454 C15 35Z A1101 53.265 1.560 -23.947 1.00 35.26 C HETATM 2455 C16 35Z A1101 53.509 1.899 -25.278 1.00 37.80 C HETATM 2456 C17 35Z A1101 52.758 3.031 -25.519 1.00 40.42 C HETATM 2457 C18 35Z A1101 52.075 3.336 -24.311 1.00 40.17 C HETATM 2458 C21 35Z A1101 50.583 4.827 -25.591 1.00 40.63 C HETATM 2459 N22 35Z A1101 51.537 4.723 -26.697 1.00 38.51 N HETATM 2460 C23 35Z A1101 52.587 3.866 -26.712 1.00 39.49 C HETATM 2461 C30 35Z A1101 50.413 6.557 -20.799 1.00 47.71 C HETATM 2462 C32 35Z A1101 51.476 7.449 -20.189 1.00 49.21 C HETATM 2463 C33 35Z A1101 51.808 7.084 -18.741 1.00 48.32 C HETATM 2464 O2 35Z A1101 53.675 -3.382 -17.035 1.00 54.50 O HETATM 2465 C9 35Z A1101 53.950 -0.753 -21.178 1.00 38.95 C HETATM 2466 C13 35Z A1101 53.826 0.431 -23.195 1.00 41.00 C HETATM 2467 N14 35Z A1101 53.474 0.251 -21.907 1.00 42.58 N HETATM 2468 N19 35Z A1101 52.410 2.452 -23.427 1.00 39.54 N HETATM 2469 C20 35Z A1101 51.163 4.531 -24.202 1.00 40.33 C HETATM 2470 O24 35Z A1101 53.356 3.796 -27.654 1.00 43.47 O HETATM 2471 C25 35Z A1101 50.039 4.200 -23.193 1.00 43.79 C HETATM 2472 C26 35Z A1101 49.297 5.462 -22.740 1.00 44.02 C HETATM 2473 N27 35Z A1101 50.317 6.340 -22.146 1.00 46.51 N HETATM 2474 C28 35Z A1101 51.223 6.887 -23.177 1.00 44.61 C HETATM 2475 C29 35Z A1101 52.040 5.709 -23.733 1.00 42.75 C HETATM 2476 O31 35Z A1101 49.607 6.040 -20.050 1.00 54.77 O HETATM 2477 O HOH A1201 50.492 -13.075 -37.174 1.00 53.89 O HETATM 2478 O HOH A1202 65.976 -1.304 -27.074 1.00 47.08 O HETATM 2479 O HOH A1203 72.312 15.588 -32.131 1.00 36.42 O HETATM 2480 O HOH A1204 59.130 17.881 -33.699 1.00 47.99 O HETATM 2481 O HOH A1205 64.958 14.108 -34.171 1.00 56.08 O HETATM 2482 O HOH A1206 72.897 8.617 -29.504 1.00 42.97 O HETATM 2483 O HOH A1207 77.704 13.728 -27.755 1.00 51.10 O HETATM 2484 O HOH A1208 69.596 -4.951 -21.068 1.00 49.61 O HETATM 2485 O HOH A1209 55.392 9.756 -32.901 1.00 47.15 O HETATM 2486 O HOH A1210 53.887 13.738 -21.133 1.00 56.68 O HETATM 2487 O HOH A1211 58.182 27.010 -22.430 1.00 60.20 O HETATM 2488 O HOH A1212 52.683 16.661 -17.797 1.00 47.20 O HETATM 2489 O HOH A1213 58.623 15.936 -30.177 1.00 45.82 O HETATM 2490 O HOH A1214 65.605 -0.172 -30.181 1.00 39.85 O HETATM 2491 O HOH A1215 74.940 25.410 -9.874 1.00 44.96 O HETATM 2492 O HOH A1216 86.586 8.282 -22.316 1.00 51.24 O HETATM 2493 O HOH A1217 50.081 15.434 -37.617 1.00 60.21 O HETATM 2494 O HOH A1218 66.878 -0.304 -40.631 1.00 46.20 O HETATM 2495 O HOH A1219 76.616 16.022 -6.010 1.00 49.09 O HETATM 2496 O HOH A1220 60.651 31.343 -13.950 1.00 52.81 O HETATM 2497 O HOH A1221 65.455 27.722 -8.142 1.00 60.61 O HETATM 2498 O HOH A1222 59.965 -7.172 -36.532 1.00 53.32 O HETATM 2499 O HOH A1223 72.336 2.013 -31.376 1.00 46.98 O HETATM 2500 O HOH A1224 52.369 4.053 -16.835 1.00 50.66 O HETATM 2501 O HOH A1225 72.458 7.106 -17.466 1.00 49.21 O HETATM 2502 O HOH A1226 54.006 30.087 -18.489 1.00 53.79 O HETATM 2503 O HOH A1227 72.514 4.842 -26.947 1.00 42.34 O HETATM 2504 O HOH A1228 58.808 -14.109 -39.064 1.00 56.01 O HETATM 2505 O HOH A1229 66.617 7.149 5.692 1.00 56.63 O HETATM 2506 O HOH A1230 74.321 6.951 -27.696 1.00 41.29 O HETATM 2507 O HOH A1231 74.460 2.668 -26.585 1.00 54.45 O CONECT 770 2463 CONECT 2444 2464 CONECT 2445 2446 2450 2464 CONECT 2446 2445 2447 CONECT 2447 2446 2448 CONECT 2448 2447 2449 CONECT 2449 2448 2450 2465 CONECT 2450 2445 2449 CONECT 2451 2452 2465 CONECT 2452 2451 2453 CONECT 2453 2452 2466 CONECT 2454 2455 2466 2468 CONECT 2455 2454 2456 CONECT 2456 2455 2457 2460 CONECT 2457 2456 2468 2469 CONECT 2458 2459 2469 CONECT 2459 2458 2460 CONECT 2460 2456 2459 2470 CONECT 2461 2462 2473 2476 CONECT 2462 2461 2463 CONECT 2463 770 2462 CONECT 2464 2444 2445 CONECT 2465 2449 2451 2467 CONECT 2466 2453 2454 2467 CONECT 2467 2465 2466 CONECT 2468 2454 2457 CONECT 2469 2457 2458 2471 2475 CONECT 2470 2460 CONECT 2471 2469 2472 CONECT 2472 2471 2473 CONECT 2473 2461 2472 2474 CONECT 2474 2473 2475 CONECT 2475 2469 2474 CONECT 2476 2461 MASTER 409 0 1 16 9 0 0 6 2506 1 34 26 END