HEADER METAL BINDING PROTEIN 24-JUN-21 7OYI TITLE ESCHERICHIA COLI YTFE_E159L(MN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-SULFUR CLUSTER REPAIR PROTEIN YTFE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: REGULATOR OF CELL MORPHOGENESIS AND NO SIGNALING,RCMNS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: YTFE, B4209, JW4167; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS DI-IRON, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.S.O.SILVA,P.MATIAS,C.V.ROMAO,L.M.SARAIVA REVDAT 3 31-JAN-24 7OYI 1 REMARK REVDAT 2 20-JUL-22 7OYI 1 JRNL REVDAT 1 06-JUL-22 7OYI 0 JRNL AUTH L.S.O.SILVA,P.M.MATIAS,C.V.ROMAO,L.M.SARAIVA JRNL TITL REPAIR OF IRON CENTER PROTEINS-A DIFFERENT CLASS OF JRNL TITL 2 HEMERYTHRIN-LIKE PROTEINS. JRNL REF MOLECULES V. 27 2022 JRNL REFN ESSN 1420-3049 JRNL PMID 35807291 JRNL DOI 10.3390/MOLECULES27134051 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 42989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 2089 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.3900 - 4.5800 0.99 2826 136 0.1717 0.1691 REMARK 3 2 4.5800 - 3.6300 0.99 2771 126 0.1425 0.1532 REMARK 3 3 3.6300 - 3.1700 0.99 2755 128 0.1810 0.2271 REMARK 3 4 3.1700 - 2.8800 0.99 2714 143 0.1986 0.2425 REMARK 3 5 2.8800 - 2.6800 0.99 2731 141 0.1815 0.1930 REMARK 3 6 2.6800 - 2.5200 0.99 2710 135 0.1740 0.1919 REMARK 3 7 2.5200 - 2.3900 0.99 2715 147 0.1816 0.2129 REMARK 3 8 2.3900 - 2.2900 0.99 2718 131 0.1940 0.2079 REMARK 3 9 2.2900 - 2.2000 0.99 2694 144 0.1927 0.2355 REMARK 3 10 2.2000 - 2.1300 0.99 2708 157 0.1850 0.2273 REMARK 3 11 2.1300 - 2.0600 0.99 2670 139 0.1940 0.2532 REMARK 3 12 2.0600 - 2.0000 1.00 2741 132 0.2027 0.2583 REMARK 3 13 2.0000 - 1.9500 1.00 2710 147 0.2294 0.2428 REMARK 3 14 1.9500 - 1.9000 1.00 2695 153 0.2685 0.2820 REMARK 3 15 1.9000 - 1.8600 1.00 2742 130 0.3336 0.3406 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.248 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.624 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3576 REMARK 3 ANGLE : 0.790 4849 REMARK 3 CHIRALITY : 0.044 544 REMARK 3 PLANARITY : 0.006 633 REMARK 3 DIHEDRAL : 12.559 1388 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1232 -11.5702 41.6503 REMARK 3 T TENSOR REMARK 3 T11: 0.1930 T22: 0.2084 REMARK 3 T33: 0.4587 T12: 0.0243 REMARK 3 T13: 0.0077 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 4.5824 L22: 3.2883 REMARK 3 L33: 4.8737 L12: -0.4649 REMARK 3 L13: -0.1083 L23: -0.2465 REMARK 3 S TENSOR REMARK 3 S11: 0.1531 S12: 0.1069 S13: -0.0294 REMARK 3 S21: -0.1780 S22: -0.1125 S23: -0.4639 REMARK 3 S31: 0.1388 S32: 0.0593 S33: -0.0542 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5216 -1.7460 43.3997 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.2006 REMARK 3 T33: 0.1907 T12: 0.0114 REMARK 3 T13: -0.0197 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.9641 L22: 2.7489 REMARK 3 L33: 2.2606 L12: -0.0732 REMARK 3 L13: 0.0683 L23: -0.9315 REMARK 3 S TENSOR REMARK 3 S11: 0.0945 S12: 0.0530 S13: -0.0132 REMARK 3 S21: -0.1420 S22: -0.1459 S23: -0.1017 REMARK 3 S31: 0.0400 S32: 0.0223 S33: 0.0061 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3826 -2.4972 10.8780 REMARK 3 T TENSOR REMARK 3 T11: 1.3794 T22: 0.7837 REMARK 3 T33: 0.8047 T12: -0.3022 REMARK 3 T13: -0.2443 T23: -0.0750 REMARK 3 L TENSOR REMARK 3 L11: 6.3591 L22: 2.3267 REMARK 3 L33: 5.7340 L12: -0.6792 REMARK 3 L13: 1.6738 L23: 2.2359 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: -1.0285 S13: 0.7711 REMARK 3 S21: 0.9995 S22: -0.0134 S23: -0.9631 REMARK 3 S31: -0.5833 S32: 0.3866 S33: -0.0217 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8590 -12.2200 3.6892 REMARK 3 T TENSOR REMARK 3 T11: 0.8021 T22: 0.3016 REMARK 3 T33: 0.2485 T12: -0.0466 REMARK 3 T13: 0.1096 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.4059 L22: 2.1521 REMARK 3 L33: 4.2080 L12: -0.1495 REMARK 3 L13: -1.2688 L23: -0.6743 REMARK 3 S TENSOR REMARK 3 S11: 0.1786 S12: -0.1707 S13: 0.1106 REMARK 3 S21: 0.6831 S22: -0.1656 S23: -0.0484 REMARK 3 S31: -0.0086 S32: 0.0079 S33: -0.0503 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 2 through 5 or REMARK 3 resid 7 through 73 or resid 75 through 80 REMARK 3 or resid 82 through 201 or resid 203 REMARK 3 through 220 or resid 301 through 303)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 2 through 5 or REMARK 3 resid 7 through 73 or resid 75 through 80 REMARK 3 or resid 82 through 201 or resid 203 REMARK 3 through 220 or resid 301 through 303)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292111734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976247 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 53.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FNN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL PH 8.5, PEG 4000, MAGNESIUM REMARK 280 CHLORIDE, MANGANESE CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.83550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 23 OH TYR B 29 2.02 REMARK 500 O PRO A 181 O HOH A 401 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 484 O HOH A 537 2556 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 30 -73.43 -94.07 REMARK 500 ILE A 136 -60.77 -125.73 REMARK 500 VAL A 211 -63.44 -130.75 REMARK 500 ALA B 30 -70.56 -94.73 REMARK 500 ILE B 136 -61.64 -126.11 REMARK 500 VAL B 211 -63.32 -131.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 84 NE2 REMARK 620 2 GLU A 133 OE1 89.6 REMARK 620 3 HIS A 204 NE2 89.2 173.9 REMARK 620 4 GLU A 208 OE2 126.0 96.5 89.1 REMARK 620 5 O A 303 O 111.7 93.1 81.8 121.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 129 NE2 REMARK 620 2 GLU A 133 OE2 90.6 REMARK 620 3 HIS A 160 NE2 92.5 125.2 REMARK 620 4 GLU A 208 OE1 174.5 85.7 86.2 REMARK 620 5 O A 303 O 80.0 111.8 122.6 105.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 84 NE2 REMARK 620 2 GLU B 133 OE1 91.2 REMARK 620 3 HIS B 204 NE2 89.3 177.1 REMARK 620 4 GLU B 208 OE2 128.6 100.8 81.2 REMARK 620 5 O B 303 O 113.9 91.9 85.3 115.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 129 NE2 REMARK 620 2 GLU B 133 OE2 89.4 REMARK 620 3 HIS B 160 NE2 91.0 128.3 REMARK 620 4 GLU B 208 OE1 168.5 87.8 82.0 REMARK 620 5 O B 303 O 86.5 112.8 118.8 104.9 REMARK 620 N 1 2 3 4 DBREF 7OYI A 2 220 UNP P69506 YTFE_ECOLI 2 220 DBREF 7OYI B 2 220 UNP P69506 YTFE_ECOLI 2 220 SEQADV 7OYI ALA A 30 UNP P69506 CYS 30 ENGINEERED MUTATION SEQADV 7OYI ALA A 31 UNP P69506 CYS 31 ENGINEERED MUTATION SEQADV 7OYI LEU A 159 UNP P69506 GLU 159 ENGINEERED MUTATION SEQADV 7OYI ALA B 30 UNP P69506 CYS 30 ENGINEERED MUTATION SEQADV 7OYI ALA B 31 UNP P69506 CYS 31 ENGINEERED MUTATION SEQADV 7OYI LEU B 159 UNP P69506 GLU 159 ENGINEERED MUTATION SEQRES 1 A 219 ALA TYR ARG ASP GLN PRO LEU GLY GLU LEU ALA LEU SER SEQRES 2 A 219 ILE PRO ARG ALA SER ALA LEU PHE ARG LYS TYR ASP MET SEQRES 3 A 219 ASP TYR ALA ALA GLY GLY LYS GLN THR LEU ALA ARG ALA SEQRES 4 A 219 ALA ALA ARG LYS GLU LEU ASP VAL GLU VAL ILE GLU ALA SEQRES 5 A 219 GLU LEU ALA LYS LEU ALA GLU GLN PRO ILE GLU LYS ASP SEQRES 6 A 219 TRP ARG SER ALA PRO LEU ALA GLU ILE ILE ASP HIS ILE SEQRES 7 A 219 ILE VAL ARG TYR HIS ASP ARG HIS ARG GLU GLN LEU PRO SEQRES 8 A 219 GLU LEU ILE LEU GLN ALA THR LYS VAL GLU ARG VAL HIS SEQRES 9 A 219 ALA ASP LYS PRO SER VAL PRO LYS GLY LEU THR LYS TYR SEQRES 10 A 219 LEU THR MET LEU HIS GLU GLU LEU SER SER HIS MET MET SEQRES 11 A 219 LYS GLU GLU GLN ILE LEU PHE PRO MET ILE LYS GLN GLY SEQRES 12 A 219 MET GLY SER GLN ALA MET GLY PRO ILE SER VAL MET GLU SEQRES 13 A 219 SER LEU HIS ASP GLU ALA GLY GLU LEU LEU GLU VAL ILE SEQRES 14 A 219 LYS HIS THR THR ASN ASN VAL THR PRO PRO PRO GLU ALA SEQRES 15 A 219 CYS THR THR TRP LYS ALA MET TYR ASN GLY ILE ASN GLU SEQRES 16 A 219 LEU ILE ASP ASP LEU MET ASP HIS ILE SER LEU GLU ASN SEQRES 17 A 219 ASN VAL LEU PHE PRO ARG ALA LEU ALA GLY GLU SEQRES 1 B 219 ALA TYR ARG ASP GLN PRO LEU GLY GLU LEU ALA LEU SER SEQRES 2 B 219 ILE PRO ARG ALA SER ALA LEU PHE ARG LYS TYR ASP MET SEQRES 3 B 219 ASP TYR ALA ALA GLY GLY LYS GLN THR LEU ALA ARG ALA SEQRES 4 B 219 ALA ALA ARG LYS GLU LEU ASP VAL GLU VAL ILE GLU ALA SEQRES 5 B 219 GLU LEU ALA LYS LEU ALA GLU GLN PRO ILE GLU LYS ASP SEQRES 6 B 219 TRP ARG SER ALA PRO LEU ALA GLU ILE ILE ASP HIS ILE SEQRES 7 B 219 ILE VAL ARG TYR HIS ASP ARG HIS ARG GLU GLN LEU PRO SEQRES 8 B 219 GLU LEU ILE LEU GLN ALA THR LYS VAL GLU ARG VAL HIS SEQRES 9 B 219 ALA ASP LYS PRO SER VAL PRO LYS GLY LEU THR LYS TYR SEQRES 10 B 219 LEU THR MET LEU HIS GLU GLU LEU SER SER HIS MET MET SEQRES 11 B 219 LYS GLU GLU GLN ILE LEU PHE PRO MET ILE LYS GLN GLY SEQRES 12 B 219 MET GLY SER GLN ALA MET GLY PRO ILE SER VAL MET GLU SEQRES 13 B 219 SER LEU HIS ASP GLU ALA GLY GLU LEU LEU GLU VAL ILE SEQRES 14 B 219 LYS HIS THR THR ASN ASN VAL THR PRO PRO PRO GLU ALA SEQRES 15 B 219 CYS THR THR TRP LYS ALA MET TYR ASN GLY ILE ASN GLU SEQRES 16 B 219 LEU ILE ASP ASP LEU MET ASP HIS ILE SER LEU GLU ASN SEQRES 17 B 219 ASN VAL LEU PHE PRO ARG ALA LEU ALA GLY GLU HET MN A 301 1 HET MN A 302 1 HET O A 303 1 HET GOL A 304 14 HET SO4 A 305 5 HET CL A 306 1 HET MN B 301 1 HET MN B 302 1 HET O B 303 1 HETNAM MN MANGANESE (II) ION HETNAM O OXYGEN ATOM HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MN 4(MN 2+) FORMUL 5 O 2(O) FORMUL 6 GOL C3 H8 O3 FORMUL 7 SO4 O4 S 2- FORMUL 8 CL CL 1- FORMUL 12 HOH *226(H2 O) HELIX 1 AA1 ALA A 2 GLN A 6 5 5 HELIX 2 AA2 PRO A 7 ILE A 15 1 9 HELIX 3 AA3 ARG A 17 TYR A 25 1 9 HELIX 4 AA4 THR A 36 LYS A 44 1 9 HELIX 5 AA5 ASP A 47 ALA A 59 1 13 HELIX 6 AA6 PRO A 71 TYR A 83 1 13 HELIX 7 AA7 TYR A 83 HIS A 105 1 23 HELIX 8 AA8 GLY A 114 ILE A 136 1 23 HELIX 9 AA9 ILE A 136 GLN A 143 1 8 HELIX 10 AB1 MET A 145 GLN A 148 5 4 HELIX 11 AB2 ALA A 149 THR A 174 1 26 HELIX 12 AB3 CYS A 184 VAL A 211 1 28 HELIX 13 AB4 VAL A 211 ALA A 218 1 8 HELIX 14 AB5 ALA B 2 GLN B 6 5 5 HELIX 15 AB6 PRO B 7 ILE B 15 1 9 HELIX 16 AB7 ARG B 17 TYR B 25 1 9 HELIX 17 AB8 THR B 36 LYS B 44 1 9 HELIX 18 AB9 ASP B 47 ALA B 59 1 13 HELIX 19 AC1 PRO B 71 TYR B 83 1 13 HELIX 20 AC2 TYR B 83 HIS B 105 1 23 HELIX 21 AC3 GLY B 114 ILE B 136 1 23 HELIX 22 AC4 ILE B 136 GLN B 143 1 8 HELIX 23 AC5 MET B 145 GLN B 148 5 4 HELIX 24 AC6 ALA B 149 THR B 174 1 26 HELIX 25 AC7 CYS B 184 VAL B 211 1 28 HELIX 26 AC8 VAL B 211 ALA B 218 1 8 LINK NE2 HIS A 84 MN MN A 301 1555 1555 2.16 LINK NE2 HIS A 129 MN MN A 302 1555 1555 2.22 LINK OE1 GLU A 133 MN MN A 301 1555 1555 2.20 LINK OE2 GLU A 133 MN MN A 302 1555 1555 2.05 LINK NE2 HIS A 160 MN MN A 302 1555 1555 2.21 LINK NE2 HIS A 204 MN MN A 301 1555 1555 2.29 LINK OE2 GLU A 208 MN MN A 301 1555 1555 2.05 LINK OE1 GLU A 208 MN MN A 302 1555 1555 2.21 LINK MN MN A 301 O O A 303 1555 1555 2.48 LINK MN MN A 302 O O A 303 1555 1555 2.47 LINK NE2 HIS B 84 MN MN B 301 1555 1555 2.18 LINK NE2 HIS B 129 MN MN B 302 1555 1555 2.17 LINK OE1 GLU B 133 MN MN B 301 1555 1555 2.10 LINK OE2 GLU B 133 MN MN B 302 1555 1555 2.09 LINK NE2 HIS B 160 MN MN B 302 1555 1555 2.18 LINK NE2 HIS B 204 MN MN B 301 1555 1555 2.17 LINK OE2 GLU B 208 MN MN B 301 1555 1555 2.06 LINK OE1 GLU B 208 MN MN B 302 1555 1555 2.14 LINK MN MN B 301 O O B 303 1555 1555 2.49 LINK MN MN B 302 O O B 303 1555 1555 2.49 CRYST1 59.824 49.671 88.091 90.00 100.48 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016716 0.000000 0.003092 0.00000 SCALE2 0.000000 0.020132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011545 0.00000