HEADER IMMUNE SYSTEM 30-JUN-21 7P0T TITLE CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY TITLE 2 COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE WITH D- TITLE 3 AMINOACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: UNP RESIDUES 25-300; COMPND 5 SYNONYM: H-2D(B); COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 9 CHAIN: B, E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DERIVED PEPTIDE GP33-41 FROM LCMV; COMPND 13 CHAIN: C, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: H2-D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: B2M; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: LYMPHOCYTIC CHORIOMENINGITIS MAMMARENAVIRUS; SOURCE 17 ORGANISM_TAXID: 11623; SOURCE 18 EXPRESSION_SYSTEM: SYNTHETIC CONSTRUCT; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 32630 KEYWDS D-AMINOACID, CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX, B2- KEYWDS 2 MICROGLOBULIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.BROGGINI,S.RICAGNO REVDAT 3 31-JAN-24 7P0T 1 REMARK REVDAT 2 13-APR-22 7P0T 1 JRNL REVDAT 1 23-MAR-22 7P0T 0 JRNL AUTH F.BALLABIO,L.BROGGINI,C.PAISSONI,X.HAN,K.PEQINI,B.M.SALA, JRNL AUTH 2 R.SUN,T.SANDALOVA,A.BARBIROLI,A.ACHOUR,S.PELLEGRINO, JRNL AUTH 3 S.RICAGNO,C.CAMILLONI JRNL TITL L- TO D-AMINO ACID SUBSTITUTION IN THE IMMUNODOMINANT JRNL TITL 2 LCMV-DERIVED EPITOPE GP33 HIGHLIGHTS THE SENSITIVITY OF THE JRNL TITL 3 TCR RECOGNITION MECHANISM FOR THE MHC/PEPTIDE STRUCTURE AND JRNL TITL 4 DYNAMICS. JRNL REF ACS OMEGA V. 7 9622 2022 JRNL REFN ESSN 2470-1343 JRNL PMID 35350306 JRNL DOI 10.1021/ACSOMEGA.1C06964 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 66.2 REMARK 3 NUMBER OF REFLECTIONS : 22225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 6.2740 - 4.9815 1.00 2211 210 0.1904 0.2275 REMARK 3 2 4.9815 - 4.3523 1.00 2174 224 0.1474 0.2055 REMARK 3 3 4.3523 - 3.9546 1.00 2188 213 0.1622 0.2384 REMARK 3 4 3.9546 - 3.6712 1.00 2175 211 0.1832 0.2226 REMARK 3 5 3.6712 - 3.4548 1.00 2149 211 0.2182 0.2330 REMARK 3 6 3.4548 - 3.2819 0.91 2006 206 0.2374 0.3016 REMARK 3 7 3.2819 - 3.1390 0.71 1541 157 0.2500 0.3512 REMARK 3 8 3.1390 - 3.0182 0.58 1252 137 0.2681 0.2847 REMARK 3 9 3.0182 - 2.9141 0.44 972 80 0.2989 0.3218 REMARK 3 10 2.9141 - 2.8230 0.29 629 61 0.3327 0.4446 REMARK 3 11 2.8230 - 2.7423 0.19 398 45 0.3763 0.4367 REMARK 3 12 2.7423 - 2.6701 0.10 212 25 0.3944 0.5838 REMARK 3 13 2.6701 - 2.6050 0.04 93 11 0.4239 0.4841 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5797 REMARK 3 ANGLE : 0.768 7922 REMARK 3 CHIRALITY : 0.047 818 REMARK 3 PLANARITY : 0.005 1025 REMARK 3 DIHEDRAL : 7.333 3756 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6287 -5.3972 12.1212 REMARK 3 T TENSOR REMARK 3 T11: 0.3316 T22: 0.2860 REMARK 3 T33: 0.3376 T12: -0.0167 REMARK 3 T13: 0.1301 T23: 0.0789 REMARK 3 L TENSOR REMARK 3 L11: 5.6146 L22: 2.5451 REMARK 3 L33: 3.8316 L12: 0.0375 REMARK 3 L13: -1.4456 L23: 0.2110 REMARK 3 S TENSOR REMARK 3 S11: 0.1006 S12: -0.5439 S13: -0.3223 REMARK 3 S21: 0.6293 S22: -0.0396 S23: 0.4678 REMARK 3 S31: 0.0810 S32: -0.6208 S33: 0.0674 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3999 11.6368 11.7340 REMARK 3 T TENSOR REMARK 3 T11: 0.7108 T22: 0.2038 REMARK 3 T33: 0.4366 T12: 0.4234 REMARK 3 T13: 0.2021 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 7.6120 L22: 6.8150 REMARK 3 L33: 4.0491 L12: -4.3566 REMARK 3 L13: -3.5683 L23: 4.3989 REMARK 3 S TENSOR REMARK 3 S11: -0.0467 S12: -0.4485 S13: 1.4959 REMARK 3 S21: 0.9468 S22: 0.3910 S23: -0.1915 REMARK 3 S31: -0.7976 S32: -0.4298 S33: 0.0309 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4592 6.8691 3.1619 REMARK 3 T TENSOR REMARK 3 T11: 0.4430 T22: 0.0412 REMARK 3 T33: 0.4833 T12: 0.1760 REMARK 3 T13: 0.1392 T23: 0.0700 REMARK 3 L TENSOR REMARK 3 L11: 2.7390 L22: 3.2688 REMARK 3 L33: 2.0317 L12: 0.3902 REMARK 3 L13: 1.0328 L23: -0.0583 REMARK 3 S TENSOR REMARK 3 S11: -0.2934 S12: 0.0113 S13: 0.7488 REMARK 3 S21: -0.0103 S22: 0.1781 S23: 0.6646 REMARK 3 S31: -0.9459 S32: -0.2955 S33: -0.0125 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6063 8.7000 40.5556 REMARK 3 T TENSOR REMARK 3 T11: 1.9270 T22: 1.0795 REMARK 3 T33: 0.6944 T12: 0.0163 REMARK 3 T13: -0.0747 T23: -0.0788 REMARK 3 L TENSOR REMARK 3 L11: 1.3233 L22: 2.8785 REMARK 3 L33: 3.2533 L12: 0.1840 REMARK 3 L13: -1.8279 L23: 0.3979 REMARK 3 S TENSOR REMARK 3 S11: -0.4140 S12: -2.2163 S13: 0.6727 REMARK 3 S21: 1.8257 S22: 0.0918 S23: -0.3852 REMARK 3 S31: -0.8666 S32: 0.0176 S33: 0.3735 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3706 11.2675 37.2050 REMARK 3 T TENSOR REMARK 3 T11: 1.1367 T22: 0.7759 REMARK 3 T33: 0.8092 T12: 0.0238 REMARK 3 T13: -0.1871 T23: -0.1564 REMARK 3 L TENSOR REMARK 3 L11: 5.3581 L22: 4.9162 REMARK 3 L33: 5.1305 L12: 2.0487 REMARK 3 L13: 0.3892 L23: 0.6516 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: -0.6335 S13: 1.4472 REMARK 3 S21: 1.0550 S22: 0.1298 S23: -0.4159 REMARK 3 S31: -1.5067 S32: 0.2513 S33: -0.1846 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6831 -4.6932 25.9202 REMARK 3 T TENSOR REMARK 3 T11: 0.4300 T22: 0.9782 REMARK 3 T33: 0.4285 T12: 0.0366 REMARK 3 T13: -0.0040 T23: 0.2686 REMARK 3 L TENSOR REMARK 3 L11: 4.6046 L22: 2.7172 REMARK 3 L33: 3.2036 L12: -0.3098 REMARK 3 L13: -3.8385 L23: 0.3169 REMARK 3 S TENSOR REMARK 3 S11: -0.3395 S12: -0.9151 S13: 0.2119 REMARK 3 S21: 0.0264 S22: 0.2208 S23: 0.2933 REMARK 3 S31: 0.0214 S32: 2.0493 S33: 0.1834 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5670 -3.7258 40.8584 REMARK 3 T TENSOR REMARK 3 T11: 0.8418 T22: 1.1178 REMARK 3 T33: 0.3744 T12: 0.1229 REMARK 3 T13: 0.0150 T23: 0.1046 REMARK 3 L TENSOR REMARK 3 L11: 2.5119 L22: 4.9136 REMARK 3 L33: 1.2215 L12: 1.3852 REMARK 3 L13: 0.2747 L23: -2.0725 REMARK 3 S TENSOR REMARK 3 S11: -0.2224 S12: -1.4277 S13: -0.1976 REMARK 3 S21: 1.6503 S22: -0.1443 S23: 0.2663 REMARK 3 S31: -0.5692 S32: 0.6652 S33: 0.0860 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9698 -9.1921 24.9352 REMARK 3 T TENSOR REMARK 3 T11: 0.4781 T22: 0.6845 REMARK 3 T33: 0.4423 T12: 0.1796 REMARK 3 T13: 0.0096 T23: 0.3738 REMARK 3 L TENSOR REMARK 3 L11: 0.2640 L22: 3.2173 REMARK 3 L33: 8.5564 L12: -0.7532 REMARK 3 L13: 0.5566 L23: -2.9782 REMARK 3 S TENSOR REMARK 3 S11: -0.1019 S12: -0.9940 S13: -0.7919 REMARK 3 S21: 0.6397 S22: 0.3734 S23: 0.6208 REMARK 3 S31: 0.2049 S32: -0.1456 S33: -0.1302 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4757 -11.0757 35.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.6883 T22: 1.3616 REMARK 3 T33: 0.4484 T12: 0.4577 REMARK 3 T13: -0.0551 T23: 0.3691 REMARK 3 L TENSOR REMARK 3 L11: 3.4021 L22: 3.4091 REMARK 3 L33: 0.6956 L12: -0.7130 REMARK 3 L13: 0.0571 L23: -1.5199 REMARK 3 S TENSOR REMARK 3 S11: -0.0445 S12: -1.4869 S13: -0.1012 REMARK 3 S21: 0.7640 S22: 0.2208 S23: -0.4087 REMARK 3 S31: 0.5693 S32: 0.7475 S33: -0.0802 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9057 -0.4972 2.4498 REMARK 3 T TENSOR REMARK 3 T11: 0.2789 T22: 0.3422 REMARK 3 T33: 0.5071 T12: 0.1208 REMARK 3 T13: 0.0222 T23: 0.2226 REMARK 3 L TENSOR REMARK 3 L11: 5.8246 L22: 4.3100 REMARK 3 L33: 6.3757 L12: -3.1492 REMARK 3 L13: -4.7275 L23: 5.1293 REMARK 3 S TENSOR REMARK 3 S11: -0.1860 S12: -0.2106 S13: -0.1679 REMARK 3 S21: -0.2778 S22: -0.1008 S23: 0.8213 REMARK 3 S31: 0.7271 S32: -0.8683 S33: 0.0253 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0006 47.1484 25.2727 REMARK 3 T TENSOR REMARK 3 T11: 0.5832 T22: 0.9420 REMARK 3 T33: 0.4979 T12: 0.0628 REMARK 3 T13: -0.0301 T23: -0.1004 REMARK 3 L TENSOR REMARK 3 L11: 8.2806 L22: 6.0503 REMARK 3 L33: 7.8250 L12: 0.7046 REMARK 3 L13: -2.6010 L23: 1.4580 REMARK 3 S TENSOR REMARK 3 S11: 0.1085 S12: -1.5146 S13: 0.2520 REMARK 3 S21: 0.7529 S22: -0.1322 S23: -0.1112 REMARK 3 S31: -0.6257 S32: -0.2157 S33: 0.1590 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 57 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5636 47.8860 18.6909 REMARK 3 T TENSOR REMARK 3 T11: 0.4819 T22: 1.0193 REMARK 3 T33: 0.5144 T12: 0.0054 REMARK 3 T13: -0.2963 T23: -0.1345 REMARK 3 L TENSOR REMARK 3 L11: 2.5300 L22: 2.7110 REMARK 3 L33: 5.8681 L12: 0.1801 REMARK 3 L13: -2.5866 L23: 0.4819 REMARK 3 S TENSOR REMARK 3 S11: 0.1593 S12: -1.1073 S13: 0.4981 REMARK 3 S21: 0.6507 S22: -0.0804 S23: -0.2362 REMARK 3 S31: -0.3239 S32: 0.6520 S33: -0.1124 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 104 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4871 34.7233 18.0225 REMARK 3 T TENSOR REMARK 3 T11: 0.6134 T22: 1.0369 REMARK 3 T33: 0.6831 T12: 0.1665 REMARK 3 T13: -0.1310 T23: 0.2966 REMARK 3 L TENSOR REMARK 3 L11: 0.3688 L22: 5.2426 REMARK 3 L33: 4.5620 L12: 0.6993 REMARK 3 L13: 0.0391 L23: -1.4545 REMARK 3 S TENSOR REMARK 3 S11: -0.0920 S12: -0.8343 S13: -0.7132 REMARK 3 S21: 0.4064 S22: -0.4206 S23: -1.0315 REMARK 3 S31: 0.9937 S32: 0.8225 S33: 0.3309 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 174 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.4999 33.1373 12.8181 REMARK 3 T TENSOR REMARK 3 T11: 0.9277 T22: 0.8340 REMARK 3 T33: 1.8952 T12: -0.0553 REMARK 3 T13: -0.3380 T23: 0.2135 REMARK 3 L TENSOR REMARK 3 L11: 4.4234 L22: 4.4511 REMARK 3 L33: 0.4634 L12: -0.1352 REMARK 3 L13: -0.6064 L23: 1.3225 REMARK 3 S TENSOR REMARK 3 S11: -0.8460 S12: 0.0920 S13: -0.5243 REMARK 3 S21: -0.1921 S22: -0.5071 S23: 2.3126 REMARK 3 S31: -1.1567 S32: -0.0830 S33: 0.4294 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 198 THROUGH 240 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.5834 33.2542 11.9825 REMARK 3 T TENSOR REMARK 3 T11: 0.9944 T22: 0.4787 REMARK 3 T33: 1.2416 T12: 0.1190 REMARK 3 T13: -0.2511 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 6.2991 L22: 3.6955 REMARK 3 L33: 7.7310 L12: 3.8406 REMARK 3 L13: 1.7236 L23: 3.3850 REMARK 3 S TENSOR REMARK 3 S11: -0.3029 S12: 0.5263 S13: -0.7991 REMARK 3 S21: -0.7952 S22: 0.6689 S23: 1.8336 REMARK 3 S31: 0.6749 S32: 0.9261 S33: 0.1656 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 241 THROUGH 274 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.9569 26.7357 11.7212 REMARK 3 T TENSOR REMARK 3 T11: 1.1865 T22: 0.3380 REMARK 3 T33: 1.8457 T12: -0.0573 REMARK 3 T13: -0.0610 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.4619 L22: 1.1048 REMARK 3 L33: 1.8670 L12: -0.0835 REMARK 3 L13: -0.3470 L23: 1.4334 REMARK 3 S TENSOR REMARK 3 S11: -0.3136 S12: -0.0073 S13: -0.9786 REMARK 3 S21: -0.1946 S22: -0.0975 S23: 2.2296 REMARK 3 S31: 0.8505 S32: -0.7658 S33: 0.3008 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3751 46.8799 6.4736 REMARK 3 T TENSOR REMARK 3 T11: 0.2661 T22: 0.3967 REMARK 3 T33: 0.4562 T12: 0.0685 REMARK 3 T13: -0.1448 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.6214 L22: 7.7387 REMARK 3 L33: 6.2202 L12: -3.7423 REMARK 3 L13: -3.6190 L23: 0.5563 REMARK 3 S TENSOR REMARK 3 S11: 0.2463 S12: 0.1714 S13: -0.8412 REMARK 3 S21: -0.2300 S22: -0.0622 S23: -0.3870 REMARK 3 S31: 0.0563 S32: 0.2472 S33: -0.0377 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 12 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.9369 46.6689 17.5293 REMARK 3 T TENSOR REMARK 3 T11: 0.2654 T22: 0.9381 REMARK 3 T33: 0.8722 T12: 0.1841 REMARK 3 T13: 0.2172 T23: 0.4165 REMARK 3 L TENSOR REMARK 3 L11: 2.0950 L22: 0.6185 REMARK 3 L33: 3.0045 L12: 0.6254 REMARK 3 L13: -2.3135 L23: -0.2435 REMARK 3 S TENSOR REMARK 3 S11: -0.6302 S12: -1.8832 S13: -1.8524 REMARK 3 S21: 0.7046 S22: 0.6829 S23: 0.8366 REMARK 3 S31: -0.0240 S32: -0.2200 S33: 0.2926 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 29 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8114 53.9362 9.9933 REMARK 3 T TENSOR REMARK 3 T11: 0.2387 T22: 0.4823 REMARK 3 T33: 0.3366 T12: -0.0054 REMARK 3 T13: -0.1546 T23: -0.1307 REMARK 3 L TENSOR REMARK 3 L11: 3.8047 L22: 6.0704 REMARK 3 L33: 5.2650 L12: -0.2213 REMARK 3 L13: -4.2631 L23: 1.4721 REMARK 3 S TENSOR REMARK 3 S11: 0.4738 S12: 0.0384 S13: 0.6598 REMARK 3 S21: 0.1484 S22: -0.4278 S23: -0.9073 REMARK 3 S31: -0.1477 S32: 0.2926 S33: 0.1918 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 42 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1420 55.2540 16.9760 REMARK 3 T TENSOR REMARK 3 T11: 0.6753 T22: 1.0563 REMARK 3 T33: 0.5511 T12: 0.1706 REMARK 3 T13: -0.2003 T23: -0.1600 REMARK 3 L TENSOR REMARK 3 L11: 2.9026 L22: 3.6774 REMARK 3 L33: 0.0608 L12: -3.2732 REMARK 3 L13: 0.4217 L23: -0.4722 REMARK 3 S TENSOR REMARK 3 S11: -0.8558 S12: -1.7794 S13: 0.7595 REMARK 3 S21: 0.7877 S22: 0.7194 S23: -0.9123 REMARK 3 S31: -0.4706 S32: 0.3022 S33: -0.0307 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 57 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5871 42.0920 11.4456 REMARK 3 T TENSOR REMARK 3 T11: 0.2948 T22: 0.7650 REMARK 3 T33: 0.8711 T12: 0.0505 REMARK 3 T13: -0.1817 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 2.0003 L22: 2.2944 REMARK 3 L33: 0.6735 L12: -2.8140 REMARK 3 L13: -1.3760 L23: -0.4780 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: -0.2579 S13: -1.4683 REMARK 3 S21: -0.2809 S22: -0.1008 S23: -0.1125 REMARK 3 S31: 0.6257 S32: -0.1091 S33: 0.1068 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 64 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.2304 52.6633 16.3376 REMARK 3 T TENSOR REMARK 3 T11: 0.3990 T22: 0.9853 REMARK 3 T33: 0.3656 T12: 0.1536 REMARK 3 T13: 0.0489 T23: 0.1408 REMARK 3 L TENSOR REMARK 3 L11: 0.0383 L22: 2.6317 REMARK 3 L33: 2.6919 L12: 0.3179 REMARK 3 L13: -0.0498 L23: -0.3035 REMARK 3 S TENSOR REMARK 3 S11: -0.4892 S12: -2.9330 S13: -0.6987 REMARK 3 S21: 0.9034 S22: 0.7427 S23: 0.6099 REMARK 3 S31: -0.1491 S32: -1.1856 S33: -0.2121 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 78 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7717 55.6586 8.9318 REMARK 3 T TENSOR REMARK 3 T11: 0.5331 T22: 0.3575 REMARK 3 T33: 0.3431 T12: 0.2427 REMARK 3 T13: -0.0637 T23: 0.0547 REMARK 3 L TENSOR REMARK 3 L11: 2.2592 L22: 1.3859 REMARK 3 L33: 7.7596 L12: 0.4691 REMARK 3 L13: 1.8608 L23: 0.9655 REMARK 3 S TENSOR REMARK 3 S11: 1.0263 S12: 0.2817 S13: -0.5288 REMARK 3 S21: 0.5233 S22: -0.1058 S23: -0.1398 REMARK 3 S31: -0.5672 S32: -0.0288 S33: -0.6977 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 84 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9462 56.6058 1.1488 REMARK 3 T TENSOR REMARK 3 T11: 0.7684 T22: 1.1095 REMARK 3 T33: 1.0545 T12: 0.0510 REMARK 3 T13: -0.1072 T23: 0.1759 REMARK 3 L TENSOR REMARK 3 L11: 6.9114 L22: 5.4120 REMARK 3 L33: 3.4487 L12: -5.8162 REMARK 3 L13: -3.6022 L23: 2.2560 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 2.7749 S13: 2.4723 REMARK 3 S21: -0.5279 S22: -0.5881 S23: -1.4586 REMARK 3 S31: -1.7712 S32: -1.0104 S33: 0.3047 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.5634 48.6687 7.1417 REMARK 3 T TENSOR REMARK 3 T11: 0.4241 T22: 0.5491 REMARK 3 T33: 0.6663 T12: 0.2824 REMARK 3 T13: -0.1431 T23: -0.1227 REMARK 3 L TENSOR REMARK 3 L11: 6.3386 L22: 5.7090 REMARK 3 L33: 6.3279 L12: -0.1010 REMARK 3 L13: -6.3236 L23: -0.2218 REMARK 3 S TENSOR REMARK 3 S11: -0.9570 S12: 0.4910 S13: -2.0428 REMARK 3 S21: -0.0403 S22: 0.3156 S23: 0.2884 REMARK 3 S31: 0.9181 S32: 0.1985 S33: 0.0936 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5317 42.8865 23.2170 REMARK 3 T TENSOR REMARK 3 T11: 1.2600 T22: 1.5439 REMARK 3 T33: 0.6570 T12: -0.1062 REMARK 3 T13: -0.3261 T23: 0.0760 REMARK 3 L TENSOR REMARK 3 L11: 3.7047 L22: 3.9700 REMARK 3 L33: 5.3000 L12: 2.4903 REMARK 3 L13: -3.7029 L23: -4.4066 REMARK 3 S TENSOR REMARK 3 S11: 1.0987 S12: 0.0340 S13: 0.7020 REMARK 3 S21: 1.5779 S22: -0.2502 S23: -0.5962 REMARK 3 S31: -0.5984 S32: 0.5342 S33: -0.8521 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7P0T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292116759. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22227 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 48.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.89 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1S7U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M AMMONIUM SULPHATE, 100 MM TRIS REMARK 280 -HCL, PH 8.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.25600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.30100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.25600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 62.30100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 175 REMARK 465 ASN A 176 REMARK 465 ALA A 177 REMARK 465 SER A 195 REMARK 465 LYS A 196 REMARK 465 GLY A 197 REMARK 465 GLU A 198 REMARK 465 VAL A 199 REMARK 465 LEU A 219 REMARK 465 ASN A 220 REMARK 465 GLY A 221 REMARK 465 GLU A 222 REMARK 465 GLU A 223 REMARK 465 LEU A 224 REMARK 465 THR A 225 REMARK 465 GLN A 226 REMARK 465 ASP A 227 REMARK 465 MET A 228 REMARK 465 GLU A 229 REMARK 465 VAL A 248 REMARK 465 VAL A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 GLU A 254 REMARK 465 TRP A 274 REMARK 465 GLU A 275 REMARK 465 PRO A 276 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 GLY D 175 REMARK 465 ASN D 176 REMARK 465 ALA D 177 REMARK 465 THR D 178 REMARK 465 LEU D 179 REMARK 465 LEU D 180 REMARK 465 LEU D 219 REMARK 465 ASN D 220 REMARK 465 GLY D 221 REMARK 465 GLU D 222 REMARK 465 GLU D 223 REMARK 465 LEU D 224 REMARK 465 THR D 225 REMARK 465 GLY D 252 REMARK 465 LYS D 253 REMARK 465 GLU D 254 REMARK 465 GLU D 275 REMARK 465 PRO D 276 REMARK 465 MET E -1 REMARK 465 GLY E 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 17 CG CD1 CD2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 ASN A 42 CG OD1 ND2 REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 LEU A 180 CG CD1 CD2 REMARK 470 ARG A 181 CG CD NE CZ NH1 NH2 REMARK 470 THR A 190 OG1 CG2 REMARK 470 HIS A 192 CG ND1 CD2 CE1 NE2 REMARK 470 PRO A 193 CG CD REMARK 470 LEU A 215 CG CD1 CD2 REMARK 470 LEU A 230 CG CD1 CD2 REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 ASN A 256 CG OD1 ND2 REMARK 470 TYR A 257 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 260 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 262 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 LEU A 266 CG CD1 CD2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 LEU A 270 CG CD1 CD2 REMARK 470 THR A 271 OG1 CG2 REMARK 470 LEU A 272 CG CD1 CD2 REMARK 470 ARG A 273 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 17 CG OD1 ND2 REMARK 470 GLN B 38 CG CD OE1 NE2 REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 ARG B 97 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 98 CG OD1 OD2 REMARK 470 MET B 99 CG SD CE REMARK 470 LEU D 17 CG CD1 CD2 REMARK 470 GLU D 18 CG CD OE1 OE2 REMARK 470 GLU D 19 CG CD OE1 OE2 REMARK 470 ASN D 30 CG OD1 ND2 REMARK 470 LYS D 31 CG CD CE NZ REMARK 470 ARG D 35 NE CZ NH1 NH2 REMARK 470 ASN D 42 CG OD1 ND2 REMARK 470 ARG D 44 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 46 CG CD OE1 OE2 REMARK 470 GLN D 54 CG CD OE1 NE2 REMARK 470 GLU D 58 CG CD OE1 OE2 REMARK 470 GLU D 61 CG CD OE1 OE2 REMARK 470 LYS D 66 CD CE NZ REMARK 470 LYS D 68 CG CD CE NZ REMARK 470 GLU D 71 CG CD OE1 OE2 REMARK 470 ARG D 79 CG CD NE CZ NH1 NH2 REMARK 470 SER D 105 OG REMARK 470 TRP D 107 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 107 CZ3 CH2 REMARK 470 ARG D 108 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 109 CG CD1 CD2 REMARK 470 LEU D 110 CG CD1 CD2 REMARK 470 GLU D 128 CG CD OE1 OE2 REMARK 470 LYS D 131 CG CD CE NZ REMARK 470 GLN D 149 CG CD OE1 NE2 REMARK 470 GLU D 154 CG CD OE1 OE2 REMARK 470 LYS D 157 CG CD CE NZ REMARK 470 GLU D 161 CG CD OE1 OE2 REMARK 470 GLU D 166 CG CD OE1 OE2 REMARK 470 HIS D 169 CG ND1 CD2 CE1 NE2 REMARK 470 ARG D 170 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 172 CG CD1 CD2 REMARK 470 LYS D 173 CG CD CE NZ REMARK 470 ASN D 174 CG OD1 ND2 REMARK 470 ARG D 181 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 186 CG CD CE NZ REMARK 470 THR D 190 OG1 CG2 REMARK 470 HIS D 192 CG ND1 CD2 CE1 NE2 REMARK 470 SER D 195 OG REMARK 470 LYS D 196 CG CD CE NZ REMARK 470 LEU D 201 CG CD1 CD2 REMARK 470 ARG D 202 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 212 CG OD1 OD2 REMARK 470 GLN D 218 CG CD OE1 NE2 REMARK 470 GLN D 226 CG CD OE1 NE2 REMARK 470 ASP D 227 CG OD1 OD2 REMARK 470 GLU D 229 CG CD OE1 OE2 REMARK 470 VAL D 249 CG1 CG2 REMARK 470 LEU D 251 CG CD1 CD2 REMARK 470 ASN D 256 CG OD1 ND2 REMARK 470 LEU D 270 CG CD1 CD2 REMARK 470 LEU D 272 CG CD1 CD2 REMARK 470 ARG D 273 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 16 CG CD OE1 OE2 REMARK 470 LYS E 19 CG CD CE NZ REMARK 470 ILE E 22 CG1 CG2 CD1 REMARK 470 GLU E 36 CG CD OE1 OE2 REMARK 470 LYS E 48 CE NZ REMARK 470 GLU E 50 CG CD OE1 OE2 REMARK 470 GLU E 69 CG CD OE1 OE2 REMARK 470 GLU E 74 CG CD OE1 OE2 REMARK 470 LYS E 83 CG CD CE NZ REMARK 470 ASP E 98 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ILE B 1 O HOH B 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 193 CB - CA - C ANGL. DEV. = 27.1 DEGREES REMARK 500 ARG A 194 C - N - CA ANGL. DEV. = 16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 79.32 -108.54 REMARK 500 GLU A 41 -75.38 -38.56 REMARK 500 SER A 105 -56.37 -29.03 REMARK 500 PRO A 210 -168.83 -78.88 REMARK 500 TRP B 60 -4.12 77.21 REMARK 500 DPN C 6 -127.54 -70.69 REMARK 500 THR D 134 -65.30 -128.19 REMARK 500 LYS D 243 149.59 -171.97 REMARK 500 HIS E 31 149.23 -170.28 REMARK 500 TRP E 60 -0.02 78.78 REMARK 500 ASP E 96 74.93 65.31 REMARK 500 ARG E 97 -33.75 -34.52 REMARK 500 DPN F 6 -94.65 -64.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 193 ARG A 194 145.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 436 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH A 437 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH A 438 DISTANCE = 7.49 ANGSTROMS REMARK 525 HOH A 439 DISTANCE = 8.89 ANGSTROMS REMARK 525 HOH A 440 DISTANCE = 10.14 ANGSTROMS REMARK 525 HOH A 441 DISTANCE = 11.13 ANGSTROMS REMARK 525 HOH A 442 DISTANCE = 17.73 ANGSTROMS REMARK 525 HOH B 214 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH B 215 DISTANCE = 10.83 ANGSTROMS DBREF 7P0T A 1 276 UNP P01899 HA11_MOUSE 25 300 DBREF 7P0T B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 7P0T C 1 9 PDB 7P0T 7P0T 1 9 DBREF 7P0T D 1 276 UNP P01899 HA11_MOUSE 25 300 DBREF 7P0T E 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 7P0T F 1 9 PDB 7P0T 7P0T 1 9 SEQADV 7P0T MET B -1 UNP P01887 INITIATING METHIONINE SEQADV 7P0T GLY B 0 UNP P01887 EXPRESSION TAG SEQADV 7P0T ASP B 85 UNP P01887 ALA 105 CONFLICT SEQADV 7P0T MET E -1 UNP P01887 INITIATING METHIONINE SEQADV 7P0T GLY E 0 UNP P01887 EXPRESSION TAG SEQADV 7P0T ASP E 85 UNP P01887 ALA 105 CONFLICT SEQRES 1 A 276 GLY PRO HIS SER MET ARG TYR PHE GLU THR ALA VAL SER SEQRES 2 A 276 ARG PRO GLY LEU GLU GLU PRO ARG TYR ILE SER VAL GLY SEQRES 3 A 276 TYR VAL ASP ASN LYS GLU PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 276 ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA PRO TRP MET SEQRES 5 A 276 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR GLN SEQRES 6 A 276 LYS ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL SER LEU SEQRES 7 A 276 ARG ASN LEU LEU GLY TYR TYR ASN GLN SER ALA GLY GLY SEQRES 8 A 276 SER HIS THR LEU GLN GLN MET SER GLY CYS ASP LEU GLY SEQRES 9 A 276 SER ASP TRP ARG LEU LEU ARG GLY TYR LEU GLN PHE ALA SEQRES 10 A 276 TYR GLU GLY ARG ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 276 LYS THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE THR SEQRES 12 A 276 ARG ARG LYS TRP GLU GLN SER GLY ALA ALA GLU HIS TYR SEQRES 13 A 276 LYS ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU HIS SEQRES 14 A 276 ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG THR SEQRES 15 A 276 ASP SER PRO LYS ALA HIS VAL THR HIS HIS PRO ARG SER SEQRES 16 A 276 LYS GLY GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 276 TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN GLY SEQRES 18 A 276 GLU GLU LEU THR GLN ASP MET GLU LEU VAL GLU THR ARG SEQRES 19 A 276 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER VAL SEQRES 20 A 276 VAL VAL PRO LEU GLY LYS GLU GLN ASN TYR THR CYS ARG SEQRES 21 A 276 VAL TYR HIS GLU GLY LEU PRO GLU PRO LEU THR LEU ARG SEQRES 22 A 276 TRP GLU PRO SEQRES 1 B 101 MET GLY ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER SEQRES 2 B 101 ARG HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN SEQRES 3 B 101 CYS TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE SEQRES 4 B 101 GLN MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU SEQRES 5 B 101 MET SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR SEQRES 6 B 101 ILE LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP SEQRES 7 B 101 THR TYR ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU SEQRES 8 B 101 PRO LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 9 LYS ALA VAL TYR ASN DPN ALA THR MET SEQRES 1 D 276 GLY PRO HIS SER MET ARG TYR PHE GLU THR ALA VAL SER SEQRES 2 D 276 ARG PRO GLY LEU GLU GLU PRO ARG TYR ILE SER VAL GLY SEQRES 3 D 276 TYR VAL ASP ASN LYS GLU PHE VAL ARG PHE ASP SER ASP SEQRES 4 D 276 ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA PRO TRP MET SEQRES 5 D 276 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR GLN SEQRES 6 D 276 LYS ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL SER LEU SEQRES 7 D 276 ARG ASN LEU LEU GLY TYR TYR ASN GLN SER ALA GLY GLY SEQRES 8 D 276 SER HIS THR LEU GLN GLN MET SER GLY CYS ASP LEU GLY SEQRES 9 D 276 SER ASP TRP ARG LEU LEU ARG GLY TYR LEU GLN PHE ALA SEQRES 10 D 276 TYR GLU GLY ARG ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 D 276 LYS THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE THR SEQRES 12 D 276 ARG ARG LYS TRP GLU GLN SER GLY ALA ALA GLU HIS TYR SEQRES 13 D 276 LYS ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU HIS SEQRES 14 D 276 ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG THR SEQRES 15 D 276 ASP SER PRO LYS ALA HIS VAL THR HIS HIS PRO ARG SER SEQRES 16 D 276 LYS GLY GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 D 276 TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN GLY SEQRES 18 D 276 GLU GLU LEU THR GLN ASP MET GLU LEU VAL GLU THR ARG SEQRES 19 D 276 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER VAL SEQRES 20 D 276 VAL VAL PRO LEU GLY LYS GLU GLN ASN TYR THR CYS ARG SEQRES 21 D 276 VAL TYR HIS GLU GLY LEU PRO GLU PRO LEU THR LEU ARG SEQRES 22 D 276 TRP GLU PRO SEQRES 1 E 101 MET GLY ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER SEQRES 2 E 101 ARG HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN SEQRES 3 E 101 CYS TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE SEQRES 4 E 101 GLN MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU SEQRES 5 E 101 MET SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR SEQRES 6 E 101 ILE LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP SEQRES 7 E 101 THR TYR ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU SEQRES 8 E 101 PRO LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 F 9 LYS ALA VAL TYR ASN DPN ALA THR MET HET DPN C 6 11 HET DPN F 6 11 HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET CL A 304 1 HET SO4 B 101 5 HET SO4 B 102 5 HET SO4 D 301 5 HET SO4 E 101 5 HET SO4 E 102 5 HETNAM DPN D-PHENYLALANINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 DPN 2(C9 H11 N O2) FORMUL 7 SO4 8(O4 S 2-) FORMUL 10 CL CL 1- FORMUL 16 HOH *73(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 SER A 150 1 14 HELIX 4 AA4 GLY A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 ASN A 174 1 13 HELIX 6 AA6 GLY D 56 TYR D 85 1 30 HELIX 7 AA7 ALA D 140 GLN D 149 1 10 HELIX 8 AA8 GLY D 151 GLY D 162 1 12 HELIX 9 AA9 GLY D 162 ASN D 174 1 13 SHEET 1 AA1 8 TYR A 45 PRO A 47 0 SHEET 2 AA1 8 LYS A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O VAL A 34 SHEET 4 AA1 8 HIS A 3 SER A 13 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 HIS A 93 LEU A 103 -1 O GLN A 97 N GLU A 9 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O ALA A 117 N GLN A 96 SHEET 7 AA1 8 ARG A 121 LEU A 126 -1 O LEU A 126 N LEU A 114 SHEET 8 AA1 8 TRP A 133 THR A 134 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 THR A 190 0 SHEET 2 AA2 4 ARG A 202 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA2 4 PHE A 241 SER A 246 -1 O LYS A 243 N ALA A 205 SHEET 4 AA2 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA3 3 ILE A 213 TRP A 217 0 SHEET 2 AA3 3 CYS A 259 HIS A 263 -1 O ARG A 260 N THR A 216 SHEET 3 AA3 3 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA4 4 GLN B 6 SER B 11 0 SHEET 2 AA4 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA4 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA4 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 AA5 4 GLN B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA5 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA6 3 GLU B 36 LYS B 41 0 SHEET 2 AA6 3 TYR B 78 LYS B 83 -1 O ALA B 79 N LEU B 40 SHEET 3 AA6 3 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA7 7 TYR D 45 PRO D 47 0 SHEET 2 AA7 7 GLU D 32 PHE D 36 -1 N ARG D 35 O GLU D 46 SHEET 3 AA7 7 ARG D 21 VAL D 28 -1 N SER D 24 O PHE D 36 SHEET 4 AA7 7 HIS D 3 SER D 13 -1 N THR D 10 O ILE D 23 SHEET 5 AA7 7 HIS D 93 LEU D 103 -1 O LEU D 103 N HIS D 3 SHEET 6 AA7 7 LEU D 109 TYR D 118 -1 O ALA D 117 N GLN D 96 SHEET 7 AA7 7 ARG D 121 ALA D 125 -1 O ILE D 124 N PHE D 116 SHEET 1 AA8 4 LYS D 186 HIS D 192 0 SHEET 2 AA8 4 GLU D 198 PHE D 208 -1 O LEU D 206 N LYS D 186 SHEET 3 AA8 4 PHE D 241 PRO D 250 -1 O PHE D 241 N PHE D 208 SHEET 4 AA8 4 GLU D 229 LEU D 230 -1 N GLU D 229 O SER D 246 SHEET 1 AA9 4 LYS D 186 HIS D 192 0 SHEET 2 AA9 4 GLU D 198 PHE D 208 -1 O LEU D 206 N LYS D 186 SHEET 3 AA9 4 PHE D 241 PRO D 250 -1 O PHE D 241 N PHE D 208 SHEET 4 AA9 4 ARG D 234 PRO D 235 -1 N ARG D 234 O GLN D 242 SHEET 1 AB1 3 ILE D 213 GLN D 218 0 SHEET 2 AB1 3 THR D 258 HIS D 263 -1 O TYR D 262 N THR D 214 SHEET 3 AB1 3 LEU D 270 LEU D 272 -1 O LEU D 272 N CYS D 259 SHEET 1 AB2 4 GLN E 6 SER E 11 0 SHEET 2 AB2 4 ASN E 21 PHE E 30 -1 O ASN E 24 N TYR E 10 SHEET 3 AB2 4 PHE E 62 PHE E 70 -1 O ALA E 66 N CYS E 25 SHEET 4 AB2 4 SER E 55 PHE E 56 -1 N SER E 55 O TYR E 63 SHEET 1 AB3 4 LYS E 44 LYS E 45 0 SHEET 2 AB3 4 ILE E 35 LYS E 41 -1 N LYS E 41 O LYS E 44 SHEET 3 AB3 4 TYR E 78 HIS E 84 -1 O ALA E 79 N LEU E 40 SHEET 4 AB3 4 LYS E 91 TYR E 94 -1 O VAL E 93 N CYS E 80 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 101 CYS D 164 1555 1555 2.04 SSBOND 5 CYS D 203 CYS D 259 1555 1555 2.03 SSBOND 6 CYS E 25 CYS E 80 1555 1555 2.08 LINK C ASN C 5 N DPN C 6 1555 1555 1.33 LINK C DPN C 6 N ALA C 7 1555 1555 1.33 LINK C ASN F 5 N DPN F 6 1555 1555 1.33 LINK C DPN F 6 N ALA F 7 1555 1555 1.33 CISPEP 1 TYR A 209 PRO A 210 0 -0.33 CISPEP 2 HIS B 31 PRO B 32 0 -1.86 CISPEP 3 TYR D 209 PRO D 210 0 2.58 CISPEP 4 HIS E 31 PRO E 32 0 -23.92 CRYST1 120.512 124.602 92.915 90.00 126.87 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008298 0.000000 0.006224 0.00000 SCALE2 0.000000 0.008026 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013454 0.00000