HEADER METAL BINDING PROTEIN 09-JUL-21 7P41 TITLE CRYSTAL STRUCTURE OF HUMAN MARC1 A165T VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1,ENDOLYSIN, COMPND 3 MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1; COMPND 4 CHAIN: D; COMPND 5 SYNONYM: MARC1,MOLYBDENUM COFACTOR SULFURASE C-TERMINAL DOMAIN- COMPND 6 CONTAINING PROTEIN 1,MOSC DOMAIN-CONTAINING PROTEIN 1,MOCO SULFURASE COMPND 7 C-TERMINAL DOMAIN-CONTAINING PROTEIN 1,LYSIS PROTEIN,LYSOZYME, COMPND 8 MURAMIDASE,MARC1,MOLYBDENUM COFACTOR SULFURASE C-TERMINAL DOMAIN- COMPND 9 CONTAINING PROTEIN 1,MOSC DOMAIN-CONTAINING PROTEIN 1,MOCO SULFURASE COMPND 10 C-TERMINAL DOMAIN-CONTAINING PROTEIN 1; COMPND 11 EC: 1.7.-.-,3.2.1.17,1.7.-.-; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_COMMON: HUMAN, BACTERIOPHAGE T4; SOURCE 4 ORGANISM_TAXID: 9606, 10665; SOURCE 5 GENE: MTARC1, MARC1, MOSC1, E, T4TP126; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: TP1001 KEYWDS MOLYBDENUM COFACTOR, MOLYBDENUM ENZYME, MOLYBDOPTERIN, PYRANOPTERIN, KEYWDS 2 MARC, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.STRUWE,A.J.SCHEIDIG REVDAT 4 31-JAN-24 7P41 1 REMARK REVDAT 3 02-NOV-22 7P41 1 JRNL REVDAT 2 25-MAY-22 7P41 1 JRNL REVDAT 1 18-AUG-21 7P41 0 JRNL AUTH M.A.STRUWE,B.CLEMENT,A.SCHEIDIG JRNL TITL LETTER TO THE EDITOR: THE CLINICALLY RELEVANT MTARC1 JRNL TITL 2 P.ALA165THR VARIANT IMPACTS NEITHER THE FOLD NOR ACTIVE SITE JRNL TITL 3 ARCHITECTURE OF THE HUMAN MARC1 PROTEIN. JRNL REF HEPATOL COMMUN V. 6 3277 2022 JRNL REFN ISSN 2471-254X JRNL PMID 35560545 JRNL DOI 10.1002/HEP4.1984 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 66853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.9200 - 4.6100 0.98 2830 172 0.1670 0.1874 REMARK 3 2 4.6100 - 3.6600 1.00 2773 142 0.1386 0.1600 REMARK 3 3 3.6600 - 3.2000 1.00 2715 142 0.1489 0.1806 REMARK 3 4 3.2000 - 2.9100 1.00 2708 160 0.1559 0.1627 REMARK 3 5 2.9100 - 2.7000 0.98 2676 130 0.1587 0.1738 REMARK 3 6 2.7000 - 2.5400 0.99 2688 119 0.1530 0.1709 REMARK 3 7 2.5400 - 2.4100 0.99 2679 136 0.1548 0.1992 REMARK 3 8 2.4100 - 2.3100 0.99 2649 148 0.1575 0.1838 REMARK 3 9 2.3100 - 2.2200 0.99 2673 140 0.1616 0.2194 REMARK 3 10 2.2200 - 2.1400 0.99 2624 133 0.1608 0.1913 REMARK 3 11 2.1400 - 2.0800 0.98 2636 151 0.1737 0.2019 REMARK 3 12 2.0800 - 2.0200 0.99 2626 142 0.1761 0.1863 REMARK 3 13 2.0200 - 1.9600 0.99 2654 123 0.1730 0.1880 REMARK 3 14 1.9600 - 1.9100 0.98 2641 130 0.1729 0.2071 REMARK 3 15 1.9100 - 1.8700 0.97 2575 146 0.1704 0.2281 REMARK 3 16 1.8700 - 1.8300 0.98 2635 127 0.1865 0.2304 REMARK 3 17 1.8300 - 1.7900 0.99 2591 146 0.1970 0.2328 REMARK 3 18 1.7900 - 1.7600 0.97 2603 131 0.1759 0.2107 REMARK 3 19 1.7600 - 1.7300 0.98 2625 131 0.1675 0.1936 REMARK 3 20 1.7300 - 1.7000 0.98 2584 130 0.1711 0.2032 REMARK 3 21 1.7000 - 1.6700 0.97 2601 146 0.1690 0.2109 REMARK 3 22 1.6700 - 1.6500 0.98 2590 128 0.1684 0.2187 REMARK 3 23 1.6500 - 1.6200 0.97 2588 128 0.1767 0.2126 REMARK 3 24 1.6200 - 1.6000 0.97 2562 146 0.1797 0.2210 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7P41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1292116935. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66911 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 53.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : 0.23900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6FW2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS-PROPANE, 5 MM SODIUM REMARK 280 MOLYBDATE, 27.5 % PEG3350, PH 6.5, VAPOR DIFFUSION, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.53150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.58200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.44350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.58200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.53150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.44350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET D 48 REMARK 465 ARG D 49 REMARK 465 GLY D 50 REMARK 465 SER D 51 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET D 52 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 415 OE2 GLU D 422 2.12 REMARK 500 O HOH D 850 O HOH D 1216 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 1248 O HOH D 1249 4545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET D 129 CA - CB - CG ANGL. DEV. = -12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR D 289 -132.24 -122.79 REMARK 500 ALA D 365 -95.94 -91.34 REMARK 500 THR D 369 -39.71 -145.93 REMARK 500 LYS D 447 -89.11 -124.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D1373 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH D1374 DISTANCE = 6.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EFK D 701 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 432 SG REMARK 620 2 EFK D 701 OT2 81.5 REMARK 620 3 EFK D 701 OT1 103.1 121.5 REMARK 620 4 MTE D 702 S1' 146.2 84.5 110.4 REMARK 620 5 MTE D 702 S2' 87.2 143.8 94.5 86.3 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FW2 RELATED DB: PDB REMARK 900 WILDTYPE STRUCTURE DBREF 7P41 D 53 128 UNP Q5VT66 MARC1_HUMAN 53 128 DBREF 7P41 D 129 287 UNP D9IEF7 D9IEF7_BPT4 1 159 DBREF 7P41 D 288 495 UNP Q5VT66 MARC1_HUMAN 129 336 SEQADV 7P41 MET D 48 UNP Q5VT66 INITIATING METHIONINE SEQADV 7P41 ARG D 49 UNP Q5VT66 EXPRESSION TAG SEQADV 7P41 GLY D 50 UNP Q5VT66 EXPRESSION TAG SEQADV 7P41 SER D 51 UNP Q5VT66 EXPRESSION TAG SEQADV 7P41 MET D 52 UNP Q5VT66 EXPRESSION TAG SEQRES 1 D 448 MET ARG GLY SER MET GLN GLN VAL GLY THR VAL ALA GLN SEQRES 2 D 448 LEU TRP ILE TYR PRO VAL LYS SER CYS LYS GLY VAL PRO SEQRES 3 D 448 VAL SER GLU ALA GLU CYS THR ALA MET GLY LEU ARG SER SEQRES 4 D 448 GLY ASN LEU ARG ASP ARG PHE TRP LEU VAL ILE ASN GLN SEQRES 5 D 448 GLU GLY ASN MET VAL THR ALA ARG GLN GLU PRO ARG LEU SEQRES 6 D 448 VAL LEU ILE SER LEU THR CYS ASP GLY ASP THR LEU THR SEQRES 7 D 448 LEU SER ALA MET ASN ILE PHE GLU MET LEU ARG ILE ASP SEQRES 8 D 448 GLU GLY LEU ARG LEU LYS ILE TYR LYS ASP THR GLU GLY SEQRES 9 D 448 TYR TYR THR ILE GLY ILE GLY HIS LEU LEU THR LYS SER SEQRES 10 D 448 PRO SER LEU ASN ALA ALA LYS SER GLU LEU ASP LYS ALA SEQRES 11 D 448 ILE GLY ARG ASN CYS ASN GLY VAL ILE THR LYS ASP GLU SEQRES 12 D 448 ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP ALA ALA VAL SEQRES 13 D 448 ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS PRO VAL TYR SEQRES 14 D 448 ASP SER LEU ASP ALA VAL ARG ARG CYS ALA LEU ILE ASN SEQRES 15 D 448 MET VAL PHE GLN MET GLY GLU THR GLY VAL ALA GLY PHE SEQRES 16 D 448 THR ASN SER LEU ARG MET LEU GLN GLN LYS ARG TRP ASP SEQRES 17 D 448 GLU ALA ALA VAL ASN LEU ALA LYS SER ARG TRP TYR ASN SEQRES 18 D 448 GLN THR PRO ASN ARG ALA LYS ARG VAL ILE THR THR PHE SEQRES 19 D 448 ARG THR GLY THR TRP ASP ALA TYR THR LYS ASP LEU LEU SEQRES 20 D 448 LEU PRO ILE LYS THR PRO THR THR ASN ALA VAL HIS LYS SEQRES 21 D 448 CYS ARG VAL HIS GLY LEU GLU ILE GLU GLY ARG ASP CYS SEQRES 22 D 448 GLY GLU ALA THR ALA GLN TRP ILE THR SER PHE LEU LYS SEQRES 23 D 448 SER GLN PRO TYR ARG LEU VAL HIS PHE GLU PRO HIS MET SEQRES 24 D 448 ARG PRO ARG ARG PRO HIS GLN ILE ALA ASP LEU PHE ARG SEQRES 25 D 448 PRO LYS ASP GLN ILE ALA TYR SER ASP THR SER PRO PHE SEQRES 26 D 448 LEU ILE LEU SER GLU ALA SER LEU ALA ASP LEU ASN SER SEQRES 27 D 448 ARG LEU GLU LYS LYS VAL LYS ALA THR ASN PHE ARG PRO SEQRES 28 D 448 ASN ILE VAL ILE SER GLY CYS ASP VAL TYR ALA GLU ASP SEQRES 29 D 448 SER TRP ASP GLU LEU LEU ILE GLY ASP VAL GLU LEU LYS SEQRES 30 D 448 ARG VAL MET ALA CYS SER ARG CYS ILE LEU THR THR VAL SEQRES 31 D 448 ASP PRO ASP THR GLY VAL MET SER ARG LYS GLU PRO LEU SEQRES 32 D 448 GLU THR LEU LYS SER TYR ARG GLN CYS ASP PRO SER GLU SEQRES 33 D 448 ARG LYS LEU TYR GLY LYS SER PRO LEU PHE GLY GLN TYR SEQRES 34 D 448 PHE VAL LEU GLU ASN PRO GLY THR ILE LYS VAL GLY ASP SEQRES 35 D 448 PRO VAL TYR LEU LEU GLY HET EFK D 701 4 HET MTE D 702 36 HET B3P D 703 45 HET CL D 704 1 HETNAM EFK OXIDANYL(OXIDANYLIDENE)MOLYBDENUM HETNAM MTE PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, HETNAM 2 MTE 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA- HETNAM 3 MTE ANTHRACEN-7-YLMETHYL)ESTER HETNAM B3P 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- HETNAM 2 B3P PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM CL CHLORIDE ION FORMUL 2 EFK H MO O2 FORMUL 3 MTE C10 H14 N5 O6 P S2 FORMUL 4 B3P C11 H26 N2 O6 FORMUL 5 CL CL 1- FORMUL 6 HOH *574(H2 O) HELIX 1 AA1 GLU D 109 ILE D 115 5 7 HELIX 2 AA2 ASN D 130 GLY D 140 1 11 HELIX 3 AA3 SER D 166 GLY D 179 1 14 HELIX 4 AA4 THR D 187 ASN D 209 1 23 HELIX 5 AA5 LEU D 212 LEU D 219 1 8 HELIX 6 AA6 ASP D 220 GLY D 235 1 16 HELIX 7 AA7 GLY D 235 GLY D 241 1 7 HELIX 8 AA8 PHE D 242 GLN D 251 1 10 HELIX 9 AA9 ARG D 253 ALA D 262 1 10 HELIX 10 AB1 SER D 264 THR D 270 1 7 HELIX 11 AB2 THR D 270 GLY D 284 1 15 HELIX 12 AB3 GLY D 321 LYS D 333 1 13 HELIX 13 AB4 ARG D 350 ALA D 355 1 6 HELIX 14 AB5 GLU D 377 SER D 385 1 9 HELIX 15 AB6 LYS D 392 ARG D 397 5 6 HELIX 16 AB7 TYR D 408 TRP D 413 5 6 HELIX 17 AB8 CYS D 432 VAL D 437 5 6 HELIX 18 AB9 PRO D 449 ARG D 457 1 9 HELIX 19 AC1 ASP D 460 ARG D 464 5 5 SHEET 1 AA1 9 VAL D 72 VAL D 74 0 SHEET 2 AA1 9 GLN D 53 ILE D 63 -1 N ILE D 63 O VAL D 72 SHEET 3 AA1 9 PRO D 490 LEU D 493 -1 O VAL D 491 N VAL D 55 SHEET 4 AA1 9 GLU D 415 ILE D 418 -1 N LEU D 417 O TYR D 492 SHEET 5 AA1 9 VAL D 421 SER D 430 -1 O VAL D 421 N ILE D 418 SHEET 6 AA1 9 LEU D 472 ASN D 481 -1 O GLU D 480 N GLU D 422 SHEET 7 AA1 9 PHE D 372 SER D 376 -1 N ILE D 374 O GLN D 475 SHEET 8 AA1 9 ILE D 400 SER D 403 1 O ILE D 400 N LEU D 375 SHEET 9 AA1 9 GLN D 53 ILE D 63 -1 N ALA D 59 O VAL D 401 SHEET 1 AA2 4 LEU D 89 ARG D 90 0 SHEET 2 AA2 4 GLY D 83 SER D 86 -1 N SER D 86 O LEU D 89 SHEET 3 AA2 4 GLU D 76 THR D 80 -1 N GLU D 78 O ARG D 85 SHEET 4 AA2 4 GLY D 483 LYS D 486 -1 O GLY D 483 N CYS D 79 SHEET 1 AA3 4 TRP D 94 ILE D 97 0 SHEET 2 AA3 4 ARG D 338 HIS D 341 -1 O VAL D 340 N LEU D 95 SHEET 3 AA3 4 LEU D 313 ASP D 319 -1 N ARG D 318 O HIS D 341 SHEET 4 AA3 4 VAL D 305 VAL D 310 -1 N HIS D 306 O GLY D 317 SHEET 1 AA4 3 SER D 116 ASP D 120 0 SHEET 2 AA4 3 THR D 123 SER D 127 -1 O SER D 127 N SER D 116 SHEET 3 AA4 3 LEU D 293 PRO D 296 -1 O LEU D 295 N LEU D 124 SHEET 1 AA5 3 ARG D 142 LYS D 147 0 SHEET 2 AA5 3 TYR D 153 GLY D 156 -1 O THR D 154 N TYR D 146 SHEET 3 AA5 3 HIS D 159 THR D 162 -1 O LEU D 161 N TYR D 153 LINK SG CYS D 432 MO EFK D 701 1555 1555 2.71 LINK MO EFK D 701 S1' MTE D 702 1555 1555 2.54 LINK MO EFK D 701 S2' MTE D 702 1555 1555 2.34 CISPEP 1 GLU D 448 PRO D 449 0 4.49 CRYST1 61.063 74.887 111.164 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016377 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013353 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008996 0.00000