HEADER HYDROLASE 11-JUL-21 7P4K TITLE SOLUBLE EPOXIDE HYDROLASE IN COMPLEX WITH FL217 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL EPOXIDE HYDROLASE 2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.3.2.10,3.1.3.76; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EPHX2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.NI,J.S.KRAMER,F.LILLICH,E.PROSCHAK,A.CHAIKUAD,S.KNAPP,STRUCTURAL AUTHOR 2 GENOMICS CONSORTIUM (SGC) REVDAT 2 31-JAN-24 7P4K 1 REMARK REVDAT 1 06-JUL-22 7P4K 0 JRNL AUTH F.F.LILLICH,S.WILLEMS,X.NI,W.KILU,C.BORKOWSKY,M.BRODSKY, JRNL AUTH 2 J.S.KRAMER,S.BRUNST,V.HERNANDEZ-OLMOS,J.HEERING,S.SCHIERLE, JRNL AUTH 3 R.I.KESTNER,F.M.MAYSER,M.HELMSTADTER,T.GOBEL,L.WEIZEL, JRNL AUTH 4 D.NAMGALADZE,A.KAISER,D.STEINHILBER,W.PFEILSCHIFTER, JRNL AUTH 5 A.S.KAHNT,A.PROSCHAK,A.CHAIKUAD,S.KNAPP,D.MERK,E.PROSCHAK JRNL TITL STRUCTURE-BASED DESIGN OF DUAL PARTIAL PEROXISOME JRNL TITL 2 PROLIFERATOR-ACTIVATED RECEPTOR GAMMA AGONISTS/SOLUBLE JRNL TITL 3 EPOXIDE HYDROLASE INHIBITORS. JRNL REF J.MED.CHEM. V. 64 17259 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34818007 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01331 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 33693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1811 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2527 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4865 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.84000 REMARK 3 B22 (A**2) : -5.72000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.75000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.244 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.128 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5121 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4659 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6970 ; 1.169 ; 1.640 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10738 ; 1.192 ; 1.585 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 619 ; 8.465 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 251 ;30.903 ;22.112 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 816 ;15.646 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;16.605 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 629 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6047 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1213 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 229 547 B 229 547 10084 0.070 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 352 REMARK 3 ORIGIN FOR THE GROUP (A): -6.1248 -3.6325 39.8878 REMARK 3 T TENSOR REMARK 3 T11: 0.0905 T22: 0.1313 REMARK 3 T33: 0.0539 T12: -0.0103 REMARK 3 T13: 0.0015 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.2408 L22: 2.2661 REMARK 3 L33: 1.6716 L12: -0.2316 REMARK 3 L13: -0.4363 L23: 0.7801 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.0410 S13: 0.0281 REMARK 3 S21: 0.0304 S22: 0.0018 S23: -0.1265 REMARK 3 S31: -0.1381 S32: 0.0092 S33: -0.0276 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 353 A 547 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2013 -14.8953 31.4266 REMARK 3 T TENSOR REMARK 3 T11: 0.0420 T22: 0.1195 REMARK 3 T33: 0.0645 T12: 0.0310 REMARK 3 T13: 0.0133 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 1.5054 L22: 2.1933 REMARK 3 L33: 2.2790 L12: -0.0310 REMARK 3 L13: -0.2500 L23: 0.2245 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: 0.1239 S13: -0.1904 REMARK 3 S21: -0.1901 S22: -0.0142 S23: -0.2298 REMARK 3 S31: 0.1014 S32: 0.1892 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 229 B 547 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9353 11.8507 62.6433 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.1463 REMARK 3 T33: 0.0076 T12: 0.0065 REMARK 3 T13: -0.0128 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.9625 L22: 1.7417 REMARK 3 L33: 1.6656 L12: -0.0534 REMARK 3 L13: -0.4119 L23: 0.4744 REMARK 3 S TENSOR REMARK 3 S11: -0.0491 S12: 0.0149 S13: -0.0120 REMARK 3 S21: 0.2041 S22: -0.0571 S23: 0.0270 REMARK 3 S31: -0.1185 S32: -0.1910 S33: 0.1061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7P4K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1292116989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 44.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6FR2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28 % (W/V) POLYETHYLENGLYCOL (PEG) REMARK 280 6000, 70 MM AMMONIUM ACETAT, 200 MM MAGNESIUM ACETAT, 100 MM REMARK 280 SODIUM CACODYLATE AT PH 6.13, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.91000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.66300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.91000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.66300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 219 REMARK 465 ALA A 220 REMARK 465 SER A 221 REMARK 465 LEU A 222 REMARK 465 ASN A 223 REMARK 465 THR A 224 REMARK 465 PRO A 225 REMARK 465 ALA A 226 REMARK 465 PRO A 227 REMARK 465 LEU A 228 REMARK 465 ILE A 375 REMARK 465 LYS A 376 REMARK 465 ALA A 377 REMARK 465 ASN A 378 REMARK 465 PRO A 379 REMARK 465 VAL A 380 REMARK 465 ASN A 548 REMARK 465 PRO A 549 REMARK 465 PRO A 550 REMARK 465 VAL A 551 REMARK 465 VAL A 552 REMARK 465 SER A 553 REMARK 465 LYS A 554 REMARK 465 MET A 555 REMARK 465 LEU A 556 REMARK 465 LEU A 557 REMARK 465 GLU A 558 REMARK 465 HIS A 559 REMARK 465 HIS A 560 REMARK 465 HIS A 561 REMARK 465 HIS A 562 REMARK 465 HIS A 563 REMARK 465 HIS A 564 REMARK 465 MET B 219 REMARK 465 ALA B 220 REMARK 465 SER B 221 REMARK 465 LEU B 222 REMARK 465 ASN B 223 REMARK 465 THR B 224 REMARK 465 PRO B 225 REMARK 465 ALA B 226 REMARK 465 PRO B 227 REMARK 465 LEU B 228 REMARK 465 SER B 374 REMARK 465 ILE B 375 REMARK 465 LYS B 376 REMARK 465 ALA B 377 REMARK 465 ASN B 378 REMARK 465 PRO B 379 REMARK 465 VAL B 380 REMARK 465 PHE B 381 REMARK 465 MET B 419 REMARK 465 HIS B 420 REMARK 465 LYS B 421 REMARK 465 VAL B 422 REMARK 465 CYS B 423 REMARK 465 GLU B 424 REMARK 465 ALA B 425 REMARK 465 GLY B 426 REMARK 465 ASN B 548 REMARK 465 PRO B 549 REMARK 465 PRO B 550 REMARK 465 VAL B 551 REMARK 465 VAL B 552 REMARK 465 SER B 553 REMARK 465 LYS B 554 REMARK 465 MET B 555 REMARK 465 LEU B 556 REMARK 465 LEU B 557 REMARK 465 GLU B 558 REMARK 465 HIS B 559 REMARK 465 HIS B 560 REMARK 465 HIS B 561 REMARK 465 HIS B 562 REMARK 465 HIS B 563 REMARK 465 HIS B 564 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 369 CG SD CE REMARK 470 LEU A 372 CG CD1 CD2 REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 SER A 374 OG REMARK 470 PHE A 381 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 382 CG OD1 OD2 REMARK 470 SER A 418 OG REMARK 470 HIS A 420 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 421 CG CD CE NZ REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 GLU A 434 CG CD OE1 OE2 REMARK 470 GLU A 435 CG CD OE1 OE2 REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 TRP A 510 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 510 CZ3 CH2 REMARK 470 HIS A 513 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 547 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 247 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 368 CG OD1 ND2 REMARK 470 MET B 369 CG SD CE REMARK 470 SER B 370 OG REMARK 470 LEU B 372 CG CD1 CD2 REMARK 470 GLU B 373 CG CD OE1 OE2 REMARK 470 ASP B 382 CG OD1 OD2 REMARK 470 SER B 418 OG REMARK 470 ASN B 431 CG OD1 ND2 REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 LEU B 480 CG CD1 CD2 REMARK 470 GLU B 533 CG CD OE1 OE2 REMARK 470 ARG B 547 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 269 -145.61 -123.26 REMARK 500 ASP A 335 -125.51 64.80 REMARK 500 ASN A 359 -44.16 85.93 REMARK 500 GLU A 435 79.16 -117.10 REMARK 500 GLU B 269 -148.76 -124.22 REMARK 500 ASP B 335 -127.04 65.61 REMARK 500 ASN B 359 -45.70 83.71 REMARK 500 GLU B 435 79.67 -119.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 291 ASP A 292 137.52 REMARK 500 MET B 291 ASP B 292 138.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 7P4K A 222 555 UNP P34913 HYES_HUMAN 222 555 DBREF 7P4K B 222 555 UNP P34913 HYES_HUMAN 222 555 SEQADV 7P4K MET A 219 UNP P34913 INITIATING METHIONINE SEQADV 7P4K ALA A 220 UNP P34913 EXPRESSION TAG SEQADV 7P4K SER A 221 UNP P34913 EXPRESSION TAG SEQADV 7P4K LEU A 556 UNP P34913 EXPRESSION TAG SEQADV 7P4K LEU A 557 UNP P34913 EXPRESSION TAG SEQADV 7P4K GLU A 558 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 559 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 560 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 561 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 562 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 563 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS A 564 UNP P34913 EXPRESSION TAG SEQADV 7P4K MET B 219 UNP P34913 INITIATING METHIONINE SEQADV 7P4K ALA B 220 UNP P34913 EXPRESSION TAG SEQADV 7P4K SER B 221 UNP P34913 EXPRESSION TAG SEQADV 7P4K LEU B 556 UNP P34913 EXPRESSION TAG SEQADV 7P4K LEU B 557 UNP P34913 EXPRESSION TAG SEQADV 7P4K GLU B 558 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 559 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 560 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 561 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 562 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 563 UNP P34913 EXPRESSION TAG SEQADV 7P4K HIS B 564 UNP P34913 EXPRESSION TAG SEQRES 1 A 346 MET ALA SER LEU ASN THR PRO ALA PRO LEU PRO THR SER SEQRES 2 A 346 CYS ASN PRO SER ASP MET SER HIS GLY TYR VAL THR VAL SEQRES 3 A 346 LYS PRO ARG VAL ARG LEU HIS PHE VAL GLU LEU GLY SER SEQRES 4 A 346 GLY PRO ALA VAL CYS LEU CYS HIS GLY PHE PRO GLU SER SEQRES 5 A 346 TRP TYR SER TRP ARG TYR GLN ILE PRO ALA LEU ALA GLN SEQRES 6 A 346 ALA GLY TYR ARG VAL LEU ALA MET ASP MET LYS GLY TYR SEQRES 7 A 346 GLY GLU SER SER ALA PRO PRO GLU ILE GLU GLU TYR CYS SEQRES 8 A 346 MET GLU VAL LEU CYS LYS GLU MET VAL THR PHE LEU ASP SEQRES 9 A 346 LYS LEU GLY LEU SER GLN ALA VAL PHE ILE GLY HIS ASP SEQRES 10 A 346 TRP GLY GLY MET LEU VAL TRP TYR MET ALA LEU PHE TYR SEQRES 11 A 346 PRO GLU ARG VAL ARG ALA VAL ALA SER LEU ASN THR PRO SEQRES 12 A 346 PHE ILE PRO ALA ASN PRO ASN MET SER PRO LEU GLU SER SEQRES 13 A 346 ILE LYS ALA ASN PRO VAL PHE ASP TYR GLN LEU TYR PHE SEQRES 14 A 346 GLN GLU PRO GLY VAL ALA GLU ALA GLU LEU GLU GLN ASN SEQRES 15 A 346 LEU SER ARG THR PHE LYS SER LEU PHE ARG ALA SER ASP SEQRES 16 A 346 GLU SER VAL LEU SER MET HIS LYS VAL CYS GLU ALA GLY SEQRES 17 A 346 GLY LEU PHE VAL ASN SER PRO GLU GLU PRO SER LEU SER SEQRES 18 A 346 ARG MET VAL THR GLU GLU GLU ILE GLN PHE TYR VAL GLN SEQRES 19 A 346 GLN PHE LYS LYS SER GLY PHE ARG GLY PRO LEU ASN TRP SEQRES 20 A 346 TYR ARG ASN MET GLU ARG ASN TRP LYS TRP ALA CYS LYS SEQRES 21 A 346 SER LEU GLY ARG LYS ILE LEU ILE PRO ALA LEU MET VAL SEQRES 22 A 346 THR ALA GLU LYS ASP PHE VAL LEU VAL PRO GLN MET SER SEQRES 23 A 346 GLN HIS MET GLU ASP TRP ILE PRO HIS LEU LYS ARG GLY SEQRES 24 A 346 HIS ILE GLU ASP CYS GLY HIS TRP THR GLN MET ASP LYS SEQRES 25 A 346 PRO THR GLU VAL ASN GLN ILE LEU ILE LYS TRP LEU ASP SEQRES 26 A 346 SER ASP ALA ARG ASN PRO PRO VAL VAL SER LYS MET LEU SEQRES 27 A 346 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 346 MET ALA SER LEU ASN THR PRO ALA PRO LEU PRO THR SER SEQRES 2 B 346 CYS ASN PRO SER ASP MET SER HIS GLY TYR VAL THR VAL SEQRES 3 B 346 LYS PRO ARG VAL ARG LEU HIS PHE VAL GLU LEU GLY SER SEQRES 4 B 346 GLY PRO ALA VAL CYS LEU CYS HIS GLY PHE PRO GLU SER SEQRES 5 B 346 TRP TYR SER TRP ARG TYR GLN ILE PRO ALA LEU ALA GLN SEQRES 6 B 346 ALA GLY TYR ARG VAL LEU ALA MET ASP MET LYS GLY TYR SEQRES 7 B 346 GLY GLU SER SER ALA PRO PRO GLU ILE GLU GLU TYR CYS SEQRES 8 B 346 MET GLU VAL LEU CYS LYS GLU MET VAL THR PHE LEU ASP SEQRES 9 B 346 LYS LEU GLY LEU SER GLN ALA VAL PHE ILE GLY HIS ASP SEQRES 10 B 346 TRP GLY GLY MET LEU VAL TRP TYR MET ALA LEU PHE TYR SEQRES 11 B 346 PRO GLU ARG VAL ARG ALA VAL ALA SER LEU ASN THR PRO SEQRES 12 B 346 PHE ILE PRO ALA ASN PRO ASN MET SER PRO LEU GLU SER SEQRES 13 B 346 ILE LYS ALA ASN PRO VAL PHE ASP TYR GLN LEU TYR PHE SEQRES 14 B 346 GLN GLU PRO GLY VAL ALA GLU ALA GLU LEU GLU GLN ASN SEQRES 15 B 346 LEU SER ARG THR PHE LYS SER LEU PHE ARG ALA SER ASP SEQRES 16 B 346 GLU SER VAL LEU SER MET HIS LYS VAL CYS GLU ALA GLY SEQRES 17 B 346 GLY LEU PHE VAL ASN SER PRO GLU GLU PRO SER LEU SER SEQRES 18 B 346 ARG MET VAL THR GLU GLU GLU ILE GLN PHE TYR VAL GLN SEQRES 19 B 346 GLN PHE LYS LYS SER GLY PHE ARG GLY PRO LEU ASN TRP SEQRES 20 B 346 TYR ARG ASN MET GLU ARG ASN TRP LYS TRP ALA CYS LYS SEQRES 21 B 346 SER LEU GLY ARG LYS ILE LEU ILE PRO ALA LEU MET VAL SEQRES 22 B 346 THR ALA GLU LYS ASP PHE VAL LEU VAL PRO GLN MET SER SEQRES 23 B 346 GLN HIS MET GLU ASP TRP ILE PRO HIS LEU LYS ARG GLY SEQRES 24 B 346 HIS ILE GLU ASP CYS GLY HIS TRP THR GLN MET ASP LYS SEQRES 25 B 346 PRO THR GLU VAL ASN GLN ILE LEU ILE LYS TRP LEU ASP SEQRES 26 B 346 SER ASP ALA ARG ASN PRO PRO VAL VAL SER LYS MET LEU SEQRES 27 B 346 LEU GLU HIS HIS HIS HIS HIS HIS HET 5IV A 601 38 HET 5IV B 601 38 HETNAM 5IV ~{N}-[[4-(CYCLOPROPYLSULFONYLAMINO)-2- HETNAM 2 5IV (TRIFLUOROMETHYL)PHENYL]METHYL]-1-[(3-FLUOROPHENYL) HETNAM 3 5IV METHYL]INDOLE-5-CARBOXAMIDE FORMUL 3 5IV 2(C27 H23 F4 N3 O3 S) FORMUL 5 HOH *74(H2 O) HELIX 1 AA1 ASN A 233 MET A 237 5 5 HELIX 2 AA2 SER A 270 ARG A 275 5 6 HELIX 3 AA3 GLN A 277 ALA A 284 1 8 HELIX 4 AA4 GLU A 304 TYR A 308 5 5 HELIX 5 AA5 CYS A 309 GLY A 325 1 17 HELIX 6 AA6 ASP A 335 TYR A 348 1 14 HELIX 7 AA7 ASP A 382 PHE A 387 1 6 HELIX 8 AA8 GLY A 391 ASN A 400 1 10 HELIX 9 AA9 ASN A 400 PHE A 409 1 10 HELIX 10 AB1 ALA A 411 SER A 415 5 5 HELIX 11 AB2 LYS A 421 GLY A 426 1 6 HELIX 12 AB3 THR A 443 LYS A 455 1 13 HELIX 13 AB4 PHE A 459 TRP A 465 1 7 HELIX 14 AB5 ASN A 468 LYS A 478 1 11 HELIX 15 AB6 VAL A 500 GLN A 505 5 6 HELIX 16 AB7 HIS A 506 TRP A 510 5 5 HELIX 17 AB8 TRP A 525 LYS A 530 1 6 HELIX 18 AB9 LYS A 530 ALA A 546 1 17 HELIX 19 AC1 ASN B 233 MET B 237 5 5 HELIX 20 AC2 SER B 270 ARG B 275 5 6 HELIX 21 AC3 GLN B 277 ALA B 284 1 8 HELIX 22 AC4 GLU B 304 TYR B 308 5 5 HELIX 23 AC5 CYS B 309 GLY B 325 1 17 HELIX 24 AC6 ASP B 335 TYR B 348 1 14 HELIX 25 AC7 TYR B 383 PHE B 387 1 5 HELIX 26 AC8 GLY B 391 ASN B 400 1 10 HELIX 27 AC9 ASN B 400 PHE B 409 1 10 HELIX 28 AD1 ALA B 411 SER B 415 5 5 HELIX 29 AD2 THR B 443 LYS B 455 1 13 HELIX 30 AD3 PHE B 459 TRP B 465 1 7 HELIX 31 AD4 ASN B 468 LYS B 478 1 11 HELIX 32 AD5 VAL B 500 GLN B 505 5 6 HELIX 33 AD6 HIS B 506 TRP B 510 5 5 HELIX 34 AD7 TRP B 525 LYS B 530 1 6 HELIX 35 AD8 LYS B 530 ALA B 546 1 17 SHEET 1 AA116 LEU A 514 ILE A 519 0 SHEET 2 AA116 ALA A 488 ALA A 493 1 N ALA A 488 O LYS A 515 SHEET 3 AA116 VAL A 352 LEU A 358 1 N SER A 357 O VAL A 491 SHEET 4 AA116 ALA A 329 HIS A 334 1 N GLY A 333 O LEU A 358 SHEET 5 AA116 ALA A 260 CYS A 264 1 N CYS A 262 O VAL A 330 SHEET 6 AA116 ARG A 287 MET A 291 1 O ARG A 287 N VAL A 261 SHEET 7 AA116 VAL A 248 LEU A 255 -1 N LEU A 255 O VAL A 288 SHEET 8 AA116 SER A 238 LYS A 245 -1 N VAL A 242 O LEU A 250 SHEET 9 AA116 SER B 238 LYS B 245 -1 O HIS B 239 N TYR A 241 SHEET 10 AA116 VAL B 248 LEU B 255 -1 O PHE B 252 N GLY B 240 SHEET 11 AA116 ARG B 287 MET B 291 -1 O VAL B 288 N LEU B 255 SHEET 12 AA116 ALA B 260 CYS B 264 1 N VAL B 261 O ARG B 287 SHEET 13 AA116 ALA B 329 HIS B 334 1 O VAL B 330 N CYS B 262 SHEET 14 AA116 VAL B 352 LEU B 358 1 O LEU B 358 N GLY B 333 SHEET 15 AA116 ALA B 488 ALA B 493 1 O VAL B 491 N SER B 357 SHEET 16 AA116 LEU B 514 ILE B 519 1 O LYS B 515 N ALA B 488 CISPEP 1 PHE A 267 PRO A 268 0 -20.00 CISPEP 2 PHE B 267 PRO B 268 0 -22.44 CRYST1 127.820 79.326 88.599 90.00 126.65 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007824 0.000000 0.005821 0.00000 SCALE2 0.000000 0.012606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014068 0.00000