data_7PAD # _entry.id 7PAD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7PAD pdb_00007pad 10.2210/pdb7pad/pdb WWPDB D_1292117354 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-08 2 'Structure model' 1 1 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7PAD _pdbx_database_status.recvd_initial_deposition_date 2021-07-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Beaumont, E.' 1 ? 'Williams, D.' 2 0000-0001-7057-6863 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Blood Cancer J' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2044-5385 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 64 _citation.page_last 64 _citation.title 'Validation of a small molecule inhibitor of PDE6D-RAS interaction with favorable anti-leukemic effects.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41408-022-00663-z _citation.pdbx_database_id_PubMed 35422065 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Canovas Nunes, S.' 1 0000-0002-5582-0773 primary 'De Vita, S.' 2 ? primary 'Anighoro, A.' 3 ? primary 'Autelitano, F.' 4 0000-0001-6269-2629 primary 'Beaumont, E.' 5 ? primary 'Klingbeil, P.' 6 ? primary 'McGuinness, M.' 7 ? primary 'Duvert, B.' 8 ? primary 'Harris, C.' 9 ? primary 'Yang, L.' 10 ? primary 'Pokharel, S.P.' 11 ? primary 'Chen, C.W.' 12 0000-0002-8737-6830 primary 'Ermann, M.' 13 ? primary 'Williams, D.A.' 14 0000-0001-7057-6863 primary 'Xu, H.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta ; 19352.996 1 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn '~{N}-[(4-ethylphenyl)methyl]-3-[5-[2-(1~{H}-indol-3-yl)ethyl]-1,3,4-oxadiazol-2-yl]-~{N}-methyl-propanamide' 416.515 1 ? ? ? ? 5 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 6 water nat water 18.015 142 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GMP-PDE delta,Protein p17' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSHHHHHHGSENLYFQSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELN FSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSR VRLFYV ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSHHHHHHGSENLYFQSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELN FSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSR VRLFYV ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 GLYCEROL GOL 4 '~{N}-[(4-ethylphenyl)methyl]-3-[5-[2-(1~{H}-indol-3-yl)ethyl]-1,3,4-oxadiazol-2-yl]-~{N}-methyl-propanamide' O7W 5 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 GLY n 1 11 SER n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 SER n 1 19 ALA n 1 20 LYS n 1 21 ASP n 1 22 GLU n 1 23 ARG n 1 24 ALA n 1 25 ARG n 1 26 GLU n 1 27 ILE n 1 28 LEU n 1 29 ARG n 1 30 GLY n 1 31 PHE n 1 32 LYS n 1 33 LEU n 1 34 ASN n 1 35 TRP n 1 36 MET n 1 37 ASN n 1 38 LEU n 1 39 ARG n 1 40 ASP n 1 41 ALA n 1 42 GLU n 1 43 THR n 1 44 GLY n 1 45 LYS n 1 46 ILE n 1 47 LEU n 1 48 TRP n 1 49 GLN n 1 50 GLY n 1 51 THR n 1 52 GLU n 1 53 ASP n 1 54 LEU n 1 55 SER n 1 56 VAL n 1 57 PRO n 1 58 GLY n 1 59 VAL n 1 60 GLU n 1 61 HIS n 1 62 GLU n 1 63 ALA n 1 64 ARG n 1 65 VAL n 1 66 PRO n 1 67 LYS n 1 68 LYS n 1 69 ILE n 1 70 LEU n 1 71 LYS n 1 72 CYS n 1 73 LYS n 1 74 ALA n 1 75 VAL n 1 76 SER n 1 77 ARG n 1 78 GLU n 1 79 LEU n 1 80 ASN n 1 81 PHE n 1 82 SER n 1 83 SER n 1 84 THR n 1 85 GLU n 1 86 GLN n 1 87 MET n 1 88 GLU n 1 89 LYS n 1 90 PHE n 1 91 ARG n 1 92 LEU n 1 93 GLU n 1 94 GLN n 1 95 LYS n 1 96 VAL n 1 97 TYR n 1 98 PHE n 1 99 LYS n 1 100 GLY n 1 101 GLN n 1 102 CYS n 1 103 LEU n 1 104 GLU n 1 105 GLU n 1 106 TRP n 1 107 PHE n 1 108 PHE n 1 109 GLU n 1 110 PHE n 1 111 GLY n 1 112 PHE n 1 113 VAL n 1 114 ILE n 1 115 PRO n 1 116 ASN n 1 117 SER n 1 118 THR n 1 119 ASN n 1 120 THR n 1 121 TRP n 1 122 GLN n 1 123 SER n 1 124 LEU n 1 125 ILE n 1 126 GLU n 1 127 ALA n 1 128 ALA n 1 129 PRO n 1 130 GLU n 1 131 SER n 1 132 GLN n 1 133 MET n 1 134 MET n 1 135 PRO n 1 136 ALA n 1 137 SER n 1 138 VAL n 1 139 LEU n 1 140 THR n 1 141 GLY n 1 142 ASN n 1 143 VAL n 1 144 ILE n 1 145 ILE n 1 146 GLU n 1 147 THR n 1 148 LYS n 1 149 PHE n 1 150 PHE n 1 151 ASP n 1 152 ASP n 1 153 ASP n 1 154 LEU n 1 155 LEU n 1 156 VAL n 1 157 SER n 1 158 THR n 1 159 SER n 1 160 ARG n 1 161 VAL n 1 162 ARG n 1 163 LEU n 1 164 PHE n 1 165 TYR n 1 166 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 166 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PDE6D, PDED' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant RIL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 O7W non-polymer . '~{N}-[(4-ethylphenyl)methyl]-3-[5-[2-(1~{H}-indol-3-yl)ethyl]-1,3,4-oxadiazol-2-yl]-~{N}-methyl-propanamide' ? 'C25 H28 N4 O2' 416.515 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -15 ? ? ? B . n A 1 2 GLY 2 -14 ? ? ? B . n A 1 3 SER 3 -13 ? ? ? B . n A 1 4 HIS 4 -12 ? ? ? B . n A 1 5 HIS 5 -11 ? ? ? B . n A 1 6 HIS 6 -10 ? ? ? B . n A 1 7 HIS 7 -9 ? ? ? B . n A 1 8 HIS 8 -8 ? ? ? B . n A 1 9 HIS 9 -7 ? ? ? B . n A 1 10 GLY 10 -6 ? ? ? B . n A 1 11 SER 11 -5 ? ? ? B . n A 1 12 GLU 12 -4 ? ? ? B . n A 1 13 ASN 13 -3 ? ? ? B . n A 1 14 LEU 14 -2 ? ? ? B . n A 1 15 TYR 15 -1 ? ? ? B . n A 1 16 PHE 16 0 ? ? ? B . n A 1 17 GLN 17 1 ? ? ? B . n A 1 18 SER 18 2 2 SER SER B . n A 1 19 ALA 19 3 3 ALA ALA B . n A 1 20 LYS 20 4 4 LYS LYS B . n A 1 21 ASP 21 5 5 ASP ASP B . n A 1 22 GLU 22 6 6 GLU GLU B . n A 1 23 ARG 23 7 7 ARG ARG B . n A 1 24 ALA 24 8 8 ALA ALA B . n A 1 25 ARG 25 9 9 ARG ARG B . n A 1 26 GLU 26 10 10 GLU GLU B . n A 1 27 ILE 27 11 11 ILE ILE B . n A 1 28 LEU 28 12 12 LEU LEU B . n A 1 29 ARG 29 13 13 ARG ARG B . n A 1 30 GLY 30 14 14 GLY GLY B . n A 1 31 PHE 31 15 15 PHE PHE B . n A 1 32 LYS 32 16 16 LYS LYS B . n A 1 33 LEU 33 17 17 LEU LEU B . n A 1 34 ASN 34 18 18 ASN ASN B . n A 1 35 TRP 35 19 19 TRP TRP B . n A 1 36 MET 36 20 20 MET MET B . n A 1 37 ASN 37 21 21 ASN ASN B . n A 1 38 LEU 38 22 22 LEU LEU B . n A 1 39 ARG 39 23 23 ARG ARG B . n A 1 40 ASP 40 24 24 ASP ASP B . n A 1 41 ALA 41 25 25 ALA ALA B . n A 1 42 GLU 42 26 26 GLU GLU B . n A 1 43 THR 43 27 27 THR THR B . n A 1 44 GLY 44 28 28 GLY GLY B . n A 1 45 LYS 45 29 29 LYS LYS B . n A 1 46 ILE 46 30 30 ILE ILE B . n A 1 47 LEU 47 31 31 LEU LEU B . n A 1 48 TRP 48 32 32 TRP TRP B . n A 1 49 GLN 49 33 33 GLN GLN B . n A 1 50 GLY 50 34 34 GLY GLY B . n A 1 51 THR 51 35 35 THR THR B . n A 1 52 GLU 52 36 36 GLU GLU B . n A 1 53 ASP 53 37 37 ASP ASP B . n A 1 54 LEU 54 38 38 LEU LEU B . n A 1 55 SER 55 39 39 SER SER B . n A 1 56 VAL 56 40 40 VAL VAL B . n A 1 57 PRO 57 41 41 PRO PRO B . n A 1 58 GLY 58 42 42 GLY GLY B . n A 1 59 VAL 59 43 43 VAL VAL B . n A 1 60 GLU 60 44 44 GLU GLU B . n A 1 61 HIS 61 45 45 HIS HIS B . n A 1 62 GLU 62 46 46 GLU GLU B . n A 1 63 ALA 63 47 47 ALA ALA B . n A 1 64 ARG 64 48 48 ARG ARG B . n A 1 65 VAL 65 49 49 VAL VAL B . n A 1 66 PRO 66 50 50 PRO PRO B . n A 1 67 LYS 67 51 51 LYS LYS B . n A 1 68 LYS 68 52 52 LYS LYS B . n A 1 69 ILE 69 53 53 ILE ILE B . n A 1 70 LEU 70 54 54 LEU LEU B . n A 1 71 LYS 71 55 55 LYS LYS B . n A 1 72 CYS 72 56 56 CYS CYS B . n A 1 73 LYS 73 57 57 LYS LYS B . n A 1 74 ALA 74 58 58 ALA ALA B . n A 1 75 VAL 75 59 59 VAL VAL B . n A 1 76 SER 76 60 60 SER SER B . n A 1 77 ARG 77 61 61 ARG ARG B . n A 1 78 GLU 78 62 62 GLU GLU B . n A 1 79 LEU 79 63 63 LEU LEU B . n A 1 80 ASN 80 64 64 ASN ASN B . n A 1 81 PHE 81 65 65 PHE PHE B . n A 1 82 SER 82 66 66 SER SER B . n A 1 83 SER 83 67 67 SER SER B . n A 1 84 THR 84 68 68 THR THR B . n A 1 85 GLU 85 69 69 GLU GLU B . n A 1 86 GLN 86 70 70 GLN GLN B . n A 1 87 MET 87 71 71 MET MET B . n A 1 88 GLU 88 72 72 GLU GLU B . n A 1 89 LYS 89 73 73 LYS LYS B . n A 1 90 PHE 90 74 74 PHE PHE B . n A 1 91 ARG 91 75 75 ARG ARG B . n A 1 92 LEU 92 76 76 LEU LEU B . n A 1 93 GLU 93 77 77 GLU GLU B . n A 1 94 GLN 94 78 78 GLN GLN B . n A 1 95 LYS 95 79 79 LYS LYS B . n A 1 96 VAL 96 80 80 VAL VAL B . n A 1 97 TYR 97 81 81 TYR TYR B . n A 1 98 PHE 98 82 82 PHE PHE B . n A 1 99 LYS 99 83 83 LYS LYS B . n A 1 100 GLY 100 84 84 GLY GLY B . n A 1 101 GLN 101 85 85 GLN GLN B . n A 1 102 CYS 102 86 86 CYS CYS B . n A 1 103 LEU 103 87 87 LEU LEU B . n A 1 104 GLU 104 88 88 GLU GLU B . n A 1 105 GLU 105 89 89 GLU GLU B . n A 1 106 TRP 106 90 90 TRP TRP B . n A 1 107 PHE 107 91 91 PHE PHE B . n A 1 108 PHE 108 92 92 PHE PHE B . n A 1 109 GLU 109 93 93 GLU GLU B . n A 1 110 PHE 110 94 94 PHE PHE B . n A 1 111 GLY 111 95 95 GLY GLY B . n A 1 112 PHE 112 96 96 PHE PHE B . n A 1 113 VAL 113 97 97 VAL VAL B . n A 1 114 ILE 114 98 98 ILE ILE B . n A 1 115 PRO 115 99 99 PRO PRO B . n A 1 116 ASN 116 100 100 ASN ASN B . n A 1 117 SER 117 101 101 SER SER B . n A 1 118 THR 118 102 102 THR THR B . n A 1 119 ASN 119 103 103 ASN ASN B . n A 1 120 THR 120 104 104 THR THR B . n A 1 121 TRP 121 105 105 TRP TRP B . n A 1 122 GLN 122 106 106 GLN GLN B . n A 1 123 SER 123 107 107 SER SER B . n A 1 124 LEU 124 108 108 LEU LEU B . n A 1 125 ILE 125 109 109 ILE ILE B . n A 1 126 GLU 126 110 110 GLU GLU B . n A 1 127 ALA 127 111 111 ALA ALA B . n A 1 128 ALA 128 112 112 ALA ALA B . n A 1 129 PRO 129 113 113 PRO PRO B . n A 1 130 GLU 130 114 114 GLU GLU B . n A 1 131 SER 131 115 115 SER SER B . n A 1 132 GLN 132 116 116 GLN GLN B . n A 1 133 MET 133 117 117 MET MET B . n A 1 134 MET 134 118 118 MET MET B . n A 1 135 PRO 135 119 119 PRO PRO B . n A 1 136 ALA 136 120 120 ALA ALA B . n A 1 137 SER 137 121 121 SER SER B . n A 1 138 VAL 138 122 122 VAL VAL B . n A 1 139 LEU 139 123 123 LEU LEU B . n A 1 140 THR 140 124 124 THR THR B . n A 1 141 GLY 141 125 125 GLY GLY B . n A 1 142 ASN 142 126 126 ASN ASN B . n A 1 143 VAL 143 127 127 VAL VAL B . n A 1 144 ILE 144 128 128 ILE ILE B . n A 1 145 ILE 145 129 129 ILE ILE B . n A 1 146 GLU 146 130 130 GLU GLU B . n A 1 147 THR 147 131 131 THR THR B . n A 1 148 LYS 148 132 132 LYS LYS B . n A 1 149 PHE 149 133 133 PHE PHE B . n A 1 150 PHE 150 134 134 PHE PHE B . n A 1 151 ASP 151 135 135 ASP ASP B . n A 1 152 ASP 152 136 136 ASP ASP B . n A 1 153 ASP 153 137 137 ASP ASP B . n A 1 154 LEU 154 138 138 LEU LEU B . n A 1 155 LEU 155 139 139 LEU LEU B . n A 1 156 VAL 156 140 140 VAL VAL B . n A 1 157 SER 157 141 141 SER SER B . n A 1 158 THR 158 142 142 THR THR B . n A 1 159 SER 159 143 143 SER SER B . n A 1 160 ARG 160 144 144 ARG ARG B . n A 1 161 VAL 161 145 145 VAL VAL B . n A 1 162 ARG 162 146 146 ARG ARG B . n A 1 163 LEU 163 147 147 LEU LEU B . n A 1 164 PHE 164 148 148 PHE PHE B . n A 1 165 TYR 165 149 149 TYR TYR B . n A 1 166 VAL 166 150 150 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 201 201 NI NI B . C 3 GOL 1 202 202 GOL GOL B . D 4 O7W 1 203 203 O7W O7W B . E 5 EPE 1 204 204 EPE EPE B . F 6 HOH 1 301 301 HOH HOH B . F 6 HOH 2 302 302 HOH HOH B . F 6 HOH 3 303 303 HOH HOH B . F 6 HOH 4 304 304 HOH HOH B . F 6 HOH 5 305 305 HOH HOH B . F 6 HOH 6 306 306 HOH HOH B . F 6 HOH 7 307 307 HOH HOH B . F 6 HOH 8 308 308 HOH HOH B . F 6 HOH 9 309 309 HOH HOH B . F 6 HOH 10 310 310 HOH HOH B . F 6 HOH 11 311 311 HOH HOH B . F 6 HOH 12 312 312 HOH HOH B . F 6 HOH 13 313 313 HOH HOH B . F 6 HOH 14 314 314 HOH HOH B . F 6 HOH 15 315 315 HOH HOH B . F 6 HOH 16 316 316 HOH HOH B . F 6 HOH 17 317 317 HOH HOH B . F 6 HOH 18 318 318 HOH HOH B . F 6 HOH 19 319 319 HOH HOH B . F 6 HOH 20 320 320 HOH HOH B . F 6 HOH 21 321 321 HOH HOH B . F 6 HOH 22 322 322 HOH HOH B . F 6 HOH 23 323 323 HOH HOH B . F 6 HOH 24 324 324 HOH HOH B . F 6 HOH 25 325 325 HOH HOH B . F 6 HOH 26 326 326 HOH HOH B . F 6 HOH 27 327 327 HOH HOH B . F 6 HOH 28 328 328 HOH HOH B . F 6 HOH 29 329 329 HOH HOH B . F 6 HOH 30 330 330 HOH HOH B . F 6 HOH 31 331 331 HOH HOH B . F 6 HOH 32 332 332 HOH HOH B . F 6 HOH 33 333 333 HOH HOH B . F 6 HOH 34 334 334 HOH HOH B . F 6 HOH 35 335 335 HOH HOH B . F 6 HOH 36 336 336 HOH HOH B . F 6 HOH 37 337 337 HOH HOH B . F 6 HOH 38 338 338 HOH HOH B . F 6 HOH 39 339 339 HOH HOH B . F 6 HOH 40 340 340 HOH HOH B . F 6 HOH 41 341 341 HOH HOH B . F 6 HOH 42 342 342 HOH HOH B . F 6 HOH 43 343 343 HOH HOH B . F 6 HOH 44 344 344 HOH HOH B . F 6 HOH 45 345 345 HOH HOH B . F 6 HOH 46 346 346 HOH HOH B . F 6 HOH 47 347 347 HOH HOH B . F 6 HOH 48 348 348 HOH HOH B . F 6 HOH 49 349 349 HOH HOH B . F 6 HOH 50 350 350 HOH HOH B . F 6 HOH 51 351 351 HOH HOH B . F 6 HOH 52 352 352 HOH HOH B . F 6 HOH 53 353 353 HOH HOH B . F 6 HOH 54 354 354 HOH HOH B . F 6 HOH 55 355 355 HOH HOH B . F 6 HOH 56 356 356 HOH HOH B . F 6 HOH 57 357 357 HOH HOH B . F 6 HOH 58 358 358 HOH HOH B . F 6 HOH 59 359 359 HOH HOH B . F 6 HOH 60 360 360 HOH HOH B . F 6 HOH 61 361 361 HOH HOH B . F 6 HOH 62 362 362 HOH HOH B . F 6 HOH 63 363 363 HOH HOH B . F 6 HOH 64 364 364 HOH HOH B . F 6 HOH 65 365 365 HOH HOH B . F 6 HOH 66 366 366 HOH HOH B . F 6 HOH 67 367 367 HOH HOH B . F 6 HOH 68 368 368 HOH HOH B . F 6 HOH 69 369 369 HOH HOH B . F 6 HOH 70 370 370 HOH HOH B . F 6 HOH 71 371 371 HOH HOH B . F 6 HOH 72 372 372 HOH HOH B . F 6 HOH 73 373 373 HOH HOH B . F 6 HOH 74 374 374 HOH HOH B . F 6 HOH 75 375 375 HOH HOH B . F 6 HOH 76 376 376 HOH HOH B . F 6 HOH 77 377 377 HOH HOH B . F 6 HOH 78 378 378 HOH HOH B . F 6 HOH 79 379 379 HOH HOH B . F 6 HOH 80 380 380 HOH HOH B . F 6 HOH 81 381 381 HOH HOH B . F 6 HOH 82 382 382 HOH HOH B . F 6 HOH 83 383 383 HOH HOH B . F 6 HOH 84 384 384 HOH HOH B . F 6 HOH 85 385 385 HOH HOH B . F 6 HOH 86 386 386 HOH HOH B . F 6 HOH 87 387 387 HOH HOH B . F 6 HOH 88 388 388 HOH HOH B . F 6 HOH 89 389 389 HOH HOH B . F 6 HOH 90 390 390 HOH HOH B . F 6 HOH 91 391 391 HOH HOH B . F 6 HOH 92 392 392 HOH HOH B . F 6 HOH 93 393 393 HOH HOH B . F 6 HOH 94 394 394 HOH HOH B . F 6 HOH 95 395 395 HOH HOH B . F 6 HOH 96 396 396 HOH HOH B . F 6 HOH 97 397 397 HOH HOH B . F 6 HOH 98 398 398 HOH HOH B . F 6 HOH 99 399 399 HOH HOH B . F 6 HOH 100 400 400 HOH HOH B . F 6 HOH 101 401 401 HOH HOH B . F 6 HOH 102 402 402 HOH HOH B . F 6 HOH 103 403 403 HOH HOH B . F 6 HOH 104 404 404 HOH HOH B . F 6 HOH 105 405 405 HOH HOH B . F 6 HOH 106 406 406 HOH HOH B . F 6 HOH 107 407 407 HOH HOH B . F 6 HOH 108 408 408 HOH HOH B . F 6 HOH 109 409 409 HOH HOH B . F 6 HOH 110 410 410 HOH HOH B . F 6 HOH 111 411 411 HOH HOH B . F 6 HOH 112 412 412 HOH HOH B . F 6 HOH 113 413 413 HOH HOH B . F 6 HOH 114 414 414 HOH HOH B . F 6 HOH 115 415 415 HOH HOH B . F 6 HOH 116 416 416 HOH HOH B . F 6 HOH 117 417 417 HOH HOH B . F 6 HOH 118 418 418 HOH HOH B . F 6 HOH 119 419 419 HOH HOH B . F 6 HOH 120 420 420 HOH HOH B . F 6 HOH 121 421 421 HOH HOH B . F 6 HOH 122 422 422 HOH HOH B . F 6 HOH 123 423 423 HOH HOH B . F 6 HOH 124 424 424 HOH HOH B . F 6 HOH 125 425 425 HOH HOH B . F 6 HOH 126 426 426 HOH HOH B . F 6 HOH 127 427 427 HOH HOH B . F 6 HOH 128 428 428 HOH HOH B . F 6 HOH 129 429 429 HOH HOH B . F 6 HOH 130 430 430 HOH HOH B . F 6 HOH 131 431 431 HOH HOH B . F 6 HOH 132 432 432 HOH HOH B . F 6 HOH 133 433 433 HOH HOH B . F 6 HOH 134 434 434 HOH HOH B . F 6 HOH 135 435 435 HOH HOH B . F 6 HOH 136 436 436 HOH HOH B . F 6 HOH 137 437 437 HOH HOH B . F 6 HOH 138 438 438 HOH HOH B . F 6 HOH 139 439 439 HOH HOH B . F 6 HOH 140 440 440 HOH HOH B . F 6 HOH 141 441 441 HOH HOH B . F 6 HOH 142 442 442 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? '2.11.7 (6-FEB-2020)' 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? DIMPLE ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 106.070 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7PAD _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.507 _cell.length_a_esd ? _cell.length_b 39.277 _cell.length_b_esd ? _cell.length_c 44.803 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PAD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7PAD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Hepes pH7.0, 20 mM MgCl2, 20 mM NiCl2, 15 % PEG3350' _exptl_crystal_grow.pdbx_pH_range 6.8-7.3 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-11-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97926 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97926 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7PAD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.49 _reflns.d_resolution_low 43.05 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23686 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.8 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.088 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.49 _reflns_shell.d_res_low 1.52 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1162 _reflns_shell.percent_possible_all 99.4 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.653 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.896 _reflns_shell.pdbx_Rpim_I_all 0.610 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.699 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.0731 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 6.5394 _refine.aniso_B[2][2] 1.2785 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.2054 _refine.B_iso_max 111.010 _refine.B_iso_mean 19.9700 _refine.B_iso_min 9.640 _refine.correlation_coeff_Fo_to_Fc 0.9450 _refine.correlation_coeff_Fo_to_Fc_free 0.9330 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7PAD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4900 _refine.ls_d_res_low 43.0500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23674 _refine.ls_number_reflns_R_free 1120 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.7000 _refine.ls_percent_reflns_R_free 4.7300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1848 _refine.ls_R_factor_R_free 0.2098 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1836 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5NAL _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0790 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0810 _refine.pdbx_overall_SU_R_Blow_DPI 0.0830 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0800 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 7PAD _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.200 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4900 _refine_hist.d_res_low 43.0500 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 1430 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 149 _refine_hist.pdbx_B_iso_mean_ligand 33.33 _refine_hist.pdbx_B_iso_mean_solvent 30.86 _refine_hist.pdbx_number_atoms_protein 1218 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 501 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 241 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1369 ? t_it 10.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 166 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1270 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.008 ? 1386 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 1.010 ? 1896 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.950 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 15.600 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4900 _refine_ls_shell.d_res_low 1.5000 _refine_ls_shell.number_reflns_all 474 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.number_reflns_R_work 450 _refine_ls_shell.percent_reflns_obs 99.0000 _refine_ls_shell.percent_reflns_R_free 5.0600 _refine_ls_shell.R_factor_all 0.2650 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2392 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2665 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 51 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7PAD _struct.title 'The crystal structure of DW-0254 in complex with PDE6D' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7PAD _struct_keywords.text 'inhibitor, complex, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDE6D_HUMAN _struct_ref.pdbx_db_accession O43924 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKVY FKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7PAD _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 18 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O43924 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 150 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7PAD MET B 1 ? UNP O43924 ? ? 'initiating methionine' -15 1 1 7PAD GLY B 2 ? UNP O43924 ? ? 'expression tag' -14 2 1 7PAD SER B 3 ? UNP O43924 ? ? 'expression tag' -13 3 1 7PAD HIS B 4 ? UNP O43924 ? ? 'expression tag' -12 4 1 7PAD HIS B 5 ? UNP O43924 ? ? 'expression tag' -11 5 1 7PAD HIS B 6 ? UNP O43924 ? ? 'expression tag' -10 6 1 7PAD HIS B 7 ? UNP O43924 ? ? 'expression tag' -9 7 1 7PAD HIS B 8 ? UNP O43924 ? ? 'expression tag' -8 8 1 7PAD HIS B 9 ? UNP O43924 ? ? 'expression tag' -7 9 1 7PAD GLY B 10 ? UNP O43924 ? ? 'expression tag' -6 10 1 7PAD SER B 11 ? UNP O43924 ? ? 'expression tag' -5 11 1 7PAD GLU B 12 ? UNP O43924 ? ? 'expression tag' -4 12 1 7PAD ASN B 13 ? UNP O43924 ? ? 'expression tag' -3 13 1 7PAD LEU B 14 ? UNP O43924 ? ? 'expression tag' -2 14 1 7PAD TYR B 15 ? UNP O43924 ? ? 'expression tag' -1 15 1 7PAD PHE B 16 ? UNP O43924 ? ? 'expression tag' 0 16 1 7PAD GLN B 17 ? UNP O43924 ? ? 'expression tag' 1 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 640 ? 1 MORE -0 ? 1 'SSA (A^2)' 8050 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 19 ? GLY A 30 ? ALA B 3 GLY B 14 1 ? 12 HELX_P HELX_P2 AA2 LYS A 68 ? CYS A 72 ? LYS B 52 CYS B 56 5 ? 5 HELX_P HELX_P3 AA3 ALA A 128 ? MET A 133 ? ALA B 112 MET B 117 5 ? 6 HELX_P HELX_P4 AA4 PRO A 135 ? THR A 140 ? PRO B 119 THR B 124 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 18 N ? ? ? 1_555 B NI . NI ? ? B SER 2 B NI 201 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc2 metalc ? ? A SER 18 O ? ? ? 1_555 B NI . NI ? ? B SER 2 B NI 201 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc3 metalc ? ? A GLU 52 OE2 ? ? ? 1_555 B NI . NI ? ? B GLU 36 B NI 201 2_555 ? ? ? ? ? ? ? 1.982 ? ? metalc4 metalc ? ? A HIS 61 ND1 ? ? ? 1_555 B NI . NI ? ? B HIS 45 B NI 201 2_555 ? ? ? ? ? ? ? 2.203 ? ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 F HOH . O ? ? B NI 201 B HOH 312 2_545 ? ? ? ? ? ? ? 2.137 ? ? metalc6 metalc ? ? B NI . NI ? ? ? 1_555 F HOH . O ? ? B NI 201 B HOH 340 1_656 ? ? ? ? ? ? ? 2.176 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? A SER 18 ? B SER 2 ? 1_555 80.9 ? 2 N ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 OE2 ? A GLU 52 ? B GLU 36 ? 1_555 51.9 ? 3 O ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 OE2 ? A GLU 52 ? B GLU 36 ? 1_555 30.8 ? 4 N ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 ND1 ? A HIS 61 ? B HIS 45 ? 1_555 56.0 ? 5 O ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 ND1 ? A HIS 61 ? B HIS 45 ? 1_555 27.9 ? 6 OE2 ? A GLU 52 ? B GLU 36 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 ND1 ? A HIS 61 ? B HIS 45 ? 1_555 4.5 ? 7 N ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 312 ? 2_545 94.8 ? 8 O ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 312 ? 2_545 170.3 ? 9 OE2 ? A GLU 52 ? B GLU 36 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 312 ? 2_545 142.0 ? 10 ND1 ? A HIS 61 ? B HIS 45 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 312 ? 2_545 144.2 ? 11 N ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 340 ? 1_656 87.7 ? 12 O ? A SER 18 ? B SER 2 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 340 ? 1_656 84.5 ? 13 OE2 ? A GLU 52 ? B GLU 36 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 340 ? 1_656 75.6 ? 14 ND1 ? A HIS 61 ? B HIS 45 ? 1_555 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 340 ? 1_656 73.2 ? 15 O ? F HOH . ? B HOH 312 ? 2_545 NI ? B NI . ? B NI 201 ? 1_555 O ? F HOH . ? B HOH 340 ? 1_656 86.6 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 46 ? GLY A 50 ? ILE B 30 GLY B 34 AA1 2 PHE A 31 ? ASP A 40 ? PHE B 15 ASP B 24 AA1 3 VAL A 75 ? SER A 83 ? VAL B 59 SER B 67 AA1 4 SER A 117 ? ILE A 125 ? SER B 101 ILE B 109 AA2 1 GLU A 60 ? PRO A 66 ? GLU B 44 PRO B 50 AA2 2 LEU A 154 ? VAL A 166 ? LEU B 138 VAL B 150 AA2 3 VAL A 143 ? ASP A 151 ? VAL B 127 ASP B 135 AA2 4 MET A 87 ? PHE A 98 ? MET B 71 PHE B 82 AA2 5 GLN A 101 ? VAL A 113 ? GLN B 85 VAL B 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 47 ? O LEU B 31 N LEU A 38 ? N LEU B 22 AA1 2 3 N TRP A 35 ? N TRP B 19 O ASN A 80 ? O ASN B 64 AA1 3 4 N ARG A 77 ? N ARG B 61 O SER A 123 ? O SER B 107 AA2 1 2 N VAL A 65 ? N VAL B 49 O PHE A 164 ? O PHE B 148 AA2 2 3 O VAL A 156 ? O VAL B 140 N PHE A 149 ? N PHE B 133 AA2 3 4 O ILE A 144 ? O ILE B 128 N TYR A 97 ? N TYR B 81 AA2 4 5 N GLN A 94 ? N GLN B 78 O TRP A 106 ? O TRP B 90 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B NI 201 ? 2 'binding site for residue NI B 201' AC2 Software B GOL 202 ? 5 'binding site for residue GOL B 202' AC3 Software B O7W 203 ? 14 'binding site for residue O7W B 203' AC4 Software B EPE 204 ? 11 'binding site for residue EPE B 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 SER A 18 ? SER B 2 . ? 1_555 ? 2 AC1 2 HOH F . ? HOH B 340 . ? 1_656 ? 3 AC2 5 TRP A 106 ? TRP B 90 . ? 1_555 ? 4 AC2 5 PHE A 107 ? PHE B 91 . ? 1_555 ? 5 AC2 5 GLU A 126 ? GLU B 110 . ? 1_555 ? 6 AC2 5 HOH F . ? HOH B 346 . ? 1_555 ? 7 AC2 5 HOH F . ? HOH B 370 . ? 1_555 ? 8 AC3 14 MET A 36 ? MET B 20 . ? 1_555 ? 9 AC3 14 LEU A 38 ? LEU B 22 . ? 1_555 ? 10 AC3 14 ILE A 69 ? ILE B 53 . ? 1_555 ? 11 AC3 14 LEU A 79 ? LEU B 63 . ? 1_555 ? 12 AC3 14 LEU A 92 ? LEU B 76 . ? 1_555 ? 13 AC3 14 LEU A 103 ? LEU B 87 . ? 1_555 ? 14 AC3 14 GLU A 104 ? GLU B 88 . ? 1_555 ? 15 AC3 14 TRP A 106 ? TRP B 90 . ? 1_555 ? 16 AC3 14 ALA A 127 ? ALA B 111 . ? 1_555 ? 17 AC3 14 SER A 131 ? SER B 115 . ? 1_555 ? 18 AC3 14 ILE A 145 ? ILE B 129 . ? 1_555 ? 19 AC3 14 LEU A 163 ? LEU B 147 . ? 1_555 ? 20 AC3 14 TYR A 165 ? TYR B 149 . ? 1_555 ? 21 AC3 14 HOH F . ? HOH B 364 . ? 1_555 ? 22 AC4 11 PHE A 108 ? PHE B 92 . ? 1_555 ? 23 AC4 11 GLU A 109 ? GLU B 93 . ? 1_555 ? 24 AC4 11 PHE A 110 ? PHE B 94 . ? 1_555 ? 25 AC4 11 TRP A 121 ? TRP B 105 . ? 1_555 ? 26 AC4 11 GLN A 122 ? GLN B 106 . ? 1_555 ? 27 AC4 11 SER A 123 ? SER B 107 . ? 1_555 ? 28 AC4 11 HOH F . ? HOH B 317 . ? 1_555 ? 29 AC4 11 HOH F . ? HOH B 319 . ? 1_555 ? 30 AC4 11 HOH F . ? HOH B 320 . ? 1_555 ? 31 AC4 11 HOH F . ? HOH B 330 . ? 1_555 ? 32 AC4 11 HOH F . ? HOH B 371 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS B 73 ? ? -151.63 83.64 2 1 ASP B 136 ? ? 58.05 -113.13 # _pdbx_entry_details.entry_id 7PAD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET -15 ? A MET 1 2 1 Y 1 B GLY -14 ? A GLY 2 3 1 Y 1 B SER -13 ? A SER 3 4 1 Y 1 B HIS -12 ? A HIS 4 5 1 Y 1 B HIS -11 ? A HIS 5 6 1 Y 1 B HIS -10 ? A HIS 6 7 1 Y 1 B HIS -9 ? A HIS 7 8 1 Y 1 B HIS -8 ? A HIS 8 9 1 Y 1 B HIS -7 ? A HIS 9 10 1 Y 1 B GLY -6 ? A GLY 10 11 1 Y 1 B SER -5 ? A SER 11 12 1 Y 1 B GLU -4 ? A GLU 12 13 1 Y 1 B ASN -3 ? A ASN 13 14 1 Y 1 B LEU -2 ? A LEU 14 15 1 Y 1 B TYR -1 ? A TYR 15 16 1 Y 1 B PHE 0 ? A PHE 16 17 1 Y 1 B GLN 1 ? A GLN 17 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 GOL C1 C N N 170 GOL O1 O N N 171 GOL C2 C N N 172 GOL O2 O N N 173 GOL C3 C N N 174 GOL O3 O N N 175 GOL H11 H N N 176 GOL H12 H N N 177 GOL HO1 H N N 178 GOL H2 H N N 179 GOL HO2 H N N 180 GOL H31 H N N 181 GOL H32 H N N 182 GOL HO3 H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 NI NI NI N N 297 O7W C26 C Y N 298 O7W C25 C Y N 299 O7W C27 C Y N 300 O7W C4 C Y N 301 O7W C31 C Y N 302 O7W C5 C Y N 303 O7W C30 C Y N 304 O7W C24 C Y N 305 O7W C21 C Y N 306 O7W C28 C Y N 307 O7W C3 C Y N 308 O7W C6 C Y N 309 O7W C20 C Y N 310 O7W C23 C Y N 311 O7W C17 C Y N 312 O7W C14 C Y N 313 O7W C10 C N N 314 O7W C1 C N N 315 O7W C9 C N N 316 O7W C2 C N N 317 O7W C19 C N N 318 O7W C7 C N N 319 O7W C18 C N N 320 O7W C13 C N N 321 O7W C12 C N N 322 O7W N16 N Y N 323 O7W N15 N Y N 324 O7W N22 N Y N 325 O7W N8 N N N 326 O7W O11 O N N 327 O7W O29 O Y N 328 O7W H1 H N N 329 O7W H2 H N N 330 O7W H3 H N N 331 O7W H4 H N N 332 O7W H5 H N N 333 O7W H6 H N N 334 O7W H7 H N N 335 O7W H8 H N N 336 O7W H9 H N N 337 O7W H10 H N N 338 O7W H11 H N N 339 O7W H12 H N N 340 O7W H13 H N N 341 O7W H14 H N N 342 O7W H15 H N N 343 O7W H16 H N N 344 O7W H17 H N N 345 O7W H18 H N N 346 O7W H19 H N N 347 O7W H20 H N N 348 O7W H21 H N N 349 O7W H22 H N N 350 O7W H23 H N N 351 O7W H24 H N N 352 O7W H25 H N N 353 O7W H26 H N N 354 O7W H27 H N N 355 O7W H28 H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 VAL N N N N 479 VAL CA C N S 480 VAL C C N N 481 VAL O O N N 482 VAL CB C N N 483 VAL CG1 C N N 484 VAL CG2 C N N 485 VAL OXT O N N 486 VAL H H N N 487 VAL H2 H N N 488 VAL HA H N N 489 VAL HB H N N 490 VAL HG11 H N N 491 VAL HG12 H N N 492 VAL HG13 H N N 493 VAL HG21 H N N 494 VAL HG22 H N N 495 VAL HG23 H N N 496 VAL HXT H N N 497 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 GOL C1 O1 sing N N 162 GOL C1 C2 sing N N 163 GOL C1 H11 sing N N 164 GOL C1 H12 sing N N 165 GOL O1 HO1 sing N N 166 GOL C2 O2 sing N N 167 GOL C2 C3 sing N N 168 GOL C2 H2 sing N N 169 GOL O2 HO2 sing N N 170 GOL C3 O3 sing N N 171 GOL C3 H31 sing N N 172 GOL C3 H32 sing N N 173 GOL O3 HO3 sing N N 174 HIS N CA sing N N 175 HIS N H sing N N 176 HIS N H2 sing N N 177 HIS CA C sing N N 178 HIS CA CB sing N N 179 HIS CA HA sing N N 180 HIS C O doub N N 181 HIS C OXT sing N N 182 HIS CB CG sing N N 183 HIS CB HB2 sing N N 184 HIS CB HB3 sing N N 185 HIS CG ND1 sing Y N 186 HIS CG CD2 doub Y N 187 HIS ND1 CE1 doub Y N 188 HIS ND1 HD1 sing N N 189 HIS CD2 NE2 sing Y N 190 HIS CD2 HD2 sing N N 191 HIS CE1 NE2 sing Y N 192 HIS CE1 HE1 sing N N 193 HIS NE2 HE2 sing N N 194 HIS OXT HXT sing N N 195 HOH O H1 sing N N 196 HOH O H2 sing N N 197 ILE N CA sing N N 198 ILE N H sing N N 199 ILE N H2 sing N N 200 ILE CA C sing N N 201 ILE CA CB sing N N 202 ILE CA HA sing N N 203 ILE C O doub N N 204 ILE C OXT sing N N 205 ILE CB CG1 sing N N 206 ILE CB CG2 sing N N 207 ILE CB HB sing N N 208 ILE CG1 CD1 sing N N 209 ILE CG1 HG12 sing N N 210 ILE CG1 HG13 sing N N 211 ILE CG2 HG21 sing N N 212 ILE CG2 HG22 sing N N 213 ILE CG2 HG23 sing N N 214 ILE CD1 HD11 sing N N 215 ILE CD1 HD12 sing N N 216 ILE CD1 HD13 sing N N 217 ILE OXT HXT sing N N 218 LEU N CA sing N N 219 LEU N H sing N N 220 LEU N H2 sing N N 221 LEU CA C sing N N 222 LEU CA CB sing N N 223 LEU CA HA sing N N 224 LEU C O doub N N 225 LEU C OXT sing N N 226 LEU CB CG sing N N 227 LEU CB HB2 sing N N 228 LEU CB HB3 sing N N 229 LEU CG CD1 sing N N 230 LEU CG CD2 sing N N 231 LEU CG HG sing N N 232 LEU CD1 HD11 sing N N 233 LEU CD1 HD12 sing N N 234 LEU CD1 HD13 sing N N 235 LEU CD2 HD21 sing N N 236 LEU CD2 HD22 sing N N 237 LEU CD2 HD23 sing N N 238 LEU OXT HXT sing N N 239 LYS N CA sing N N 240 LYS N H sing N N 241 LYS N H2 sing N N 242 LYS CA C sing N N 243 LYS CA CB sing N N 244 LYS CA HA sing N N 245 LYS C O doub N N 246 LYS C OXT sing N N 247 LYS CB CG sing N N 248 LYS CB HB2 sing N N 249 LYS CB HB3 sing N N 250 LYS CG CD sing N N 251 LYS CG HG2 sing N N 252 LYS CG HG3 sing N N 253 LYS CD CE sing N N 254 LYS CD HD2 sing N N 255 LYS CD HD3 sing N N 256 LYS CE NZ sing N N 257 LYS CE HE2 sing N N 258 LYS CE HE3 sing N N 259 LYS NZ HZ1 sing N N 260 LYS NZ HZ2 sing N N 261 LYS NZ HZ3 sing N N 262 LYS OXT HXT sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 O7W C13 C12 sing N N 283 O7W C13 C14 sing N N 284 O7W C12 C10 sing N N 285 O7W C14 N15 doub Y N 286 O7W C14 O29 sing Y N 287 O7W N15 N16 sing Y N 288 O7W O29 C17 sing Y N 289 O7W C10 O11 doub N N 290 O7W C10 N8 sing N N 291 O7W C9 N8 sing N N 292 O7W C17 N16 doub Y N 293 O7W C17 C18 sing N N 294 O7W N8 C7 sing N N 295 O7W C4 C5 doub Y N 296 O7W C4 C3 sing Y N 297 O7W C5 C6 sing Y N 298 O7W C18 C19 sing N N 299 O7W C19 C20 sing N N 300 O7W C3 C2 sing N N 301 O7W C3 C31 doub Y N 302 O7W C2 C1 sing N N 303 O7W C6 C7 sing N N 304 O7W C6 C30 doub Y N 305 O7W C20 C21 doub Y N 306 O7W C20 C28 sing Y N 307 O7W C21 N22 sing Y N 308 O7W C31 C30 sing Y N 309 O7W N22 C23 sing Y N 310 O7W C28 C27 doub Y N 311 O7W C28 C23 sing Y N 312 O7W C27 C26 sing Y N 313 O7W C23 C24 doub Y N 314 O7W C26 C25 doub Y N 315 O7W C24 C25 sing Y N 316 O7W C26 H1 sing N N 317 O7W C25 H2 sing N N 318 O7W C27 H3 sing N N 319 O7W C4 H4 sing N N 320 O7W C31 H5 sing N N 321 O7W C5 H6 sing N N 322 O7W C30 H7 sing N N 323 O7W C24 H8 sing N N 324 O7W C21 H9 sing N N 325 O7W C1 H10 sing N N 326 O7W C1 H11 sing N N 327 O7W C1 H12 sing N N 328 O7W C9 H13 sing N N 329 O7W C9 H14 sing N N 330 O7W C9 H15 sing N N 331 O7W C2 H16 sing N N 332 O7W C2 H17 sing N N 333 O7W C19 H18 sing N N 334 O7W C19 H19 sing N N 335 O7W C7 H20 sing N N 336 O7W C7 H21 sing N N 337 O7W C18 H22 sing N N 338 O7W C18 H23 sing N N 339 O7W C13 H24 sing N N 340 O7W C13 H25 sing N N 341 O7W C12 H26 sing N N 342 O7W C12 H27 sing N N 343 O7W N22 H28 sing N N 344 PHE N CA sing N N 345 PHE N H sing N N 346 PHE N H2 sing N N 347 PHE CA C sing N N 348 PHE CA CB sing N N 349 PHE CA HA sing N N 350 PHE C O doub N N 351 PHE C OXT sing N N 352 PHE CB CG sing N N 353 PHE CB HB2 sing N N 354 PHE CB HB3 sing N N 355 PHE CG CD1 doub Y N 356 PHE CG CD2 sing Y N 357 PHE CD1 CE1 sing Y N 358 PHE CD1 HD1 sing N N 359 PHE CD2 CE2 doub Y N 360 PHE CD2 HD2 sing N N 361 PHE CE1 CZ doub Y N 362 PHE CE1 HE1 sing N N 363 PHE CE2 CZ sing Y N 364 PHE CE2 HE2 sing N N 365 PHE CZ HZ sing N N 366 PHE OXT HXT sing N N 367 PRO N CA sing N N 368 PRO N CD sing N N 369 PRO N H sing N N 370 PRO CA C sing N N 371 PRO CA CB sing N N 372 PRO CA HA sing N N 373 PRO C O doub N N 374 PRO C OXT sing N N 375 PRO CB CG sing N N 376 PRO CB HB2 sing N N 377 PRO CB HB3 sing N N 378 PRO CG CD sing N N 379 PRO CG HG2 sing N N 380 PRO CG HG3 sing N N 381 PRO CD HD2 sing N N 382 PRO CD HD3 sing N N 383 PRO OXT HXT sing N N 384 SER N CA sing N N 385 SER N H sing N N 386 SER N H2 sing N N 387 SER CA C sing N N 388 SER CA CB sing N N 389 SER CA HA sing N N 390 SER C O doub N N 391 SER C OXT sing N N 392 SER CB OG sing N N 393 SER CB HB2 sing N N 394 SER CB HB3 sing N N 395 SER OG HG sing N N 396 SER OXT HXT sing N N 397 THR N CA sing N N 398 THR N H sing N N 399 THR N H2 sing N N 400 THR CA C sing N N 401 THR CA CB sing N N 402 THR CA HA sing N N 403 THR C O doub N N 404 THR C OXT sing N N 405 THR CB OG1 sing N N 406 THR CB CG2 sing N N 407 THR CB HB sing N N 408 THR OG1 HG1 sing N N 409 THR CG2 HG21 sing N N 410 THR CG2 HG22 sing N N 411 THR CG2 HG23 sing N N 412 THR OXT HXT sing N N 413 TRP N CA sing N N 414 TRP N H sing N N 415 TRP N H2 sing N N 416 TRP CA C sing N N 417 TRP CA CB sing N N 418 TRP CA HA sing N N 419 TRP C O doub N N 420 TRP C OXT sing N N 421 TRP CB CG sing N N 422 TRP CB HB2 sing N N 423 TRP CB HB3 sing N N 424 TRP CG CD1 doub Y N 425 TRP CG CD2 sing Y N 426 TRP CD1 NE1 sing Y N 427 TRP CD1 HD1 sing N N 428 TRP CD2 CE2 doub Y N 429 TRP CD2 CE3 sing Y N 430 TRP NE1 CE2 sing Y N 431 TRP NE1 HE1 sing N N 432 TRP CE2 CZ2 sing Y N 433 TRP CE3 CZ3 doub Y N 434 TRP CE3 HE3 sing N N 435 TRP CZ2 CH2 doub Y N 436 TRP CZ2 HZ2 sing N N 437 TRP CZ3 CH2 sing Y N 438 TRP CZ3 HZ3 sing N N 439 TRP CH2 HH2 sing N N 440 TRP OXT HXT sing N N 441 TYR N CA sing N N 442 TYR N H sing N N 443 TYR N H2 sing N N 444 TYR CA C sing N N 445 TYR CA CB sing N N 446 TYR CA HA sing N N 447 TYR C O doub N N 448 TYR C OXT sing N N 449 TYR CB CG sing N N 450 TYR CB HB2 sing N N 451 TYR CB HB3 sing N N 452 TYR CG CD1 doub Y N 453 TYR CG CD2 sing Y N 454 TYR CD1 CE1 sing Y N 455 TYR CD1 HD1 sing N N 456 TYR CD2 CE2 doub Y N 457 TYR CD2 HD2 sing N N 458 TYR CE1 CZ doub Y N 459 TYR CE1 HE1 sing N N 460 TYR CE2 CZ sing Y N 461 TYR CE2 HE2 sing N N 462 TYR CZ OH sing N N 463 TYR OH HH sing N N 464 TYR OXT HXT sing N N 465 VAL N CA sing N N 466 VAL N H sing N N 467 VAL N H2 sing N N 468 VAL CA C sing N N 469 VAL CA CB sing N N 470 VAL CA HA sing N N 471 VAL C O doub N N 472 VAL C OXT sing N N 473 VAL CB CG1 sing N N 474 VAL CB CG2 sing N N 475 VAL CB HB sing N N 476 VAL CG1 HG11 sing N N 477 VAL CG1 HG12 sing N N 478 VAL CG1 HG13 sing N N 479 VAL CG2 HG21 sing N N 480 VAL CG2 HG22 sing N N 481 VAL CG2 HG23 sing N N 482 VAL OXT HXT sing N N 483 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number 5R01CA202756 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id O7W _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id O7W _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5NAL _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7PAD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022468 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006472 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025460 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023228 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N NI O S # loop_