HEADER UNKNOWN FUNCTION 10-AUG-21 7PEG TITLE STRUCTURE OF THE SPORULATION/GERMINATION PROTEIN YHCN FROM BACILLUS TITLE 2 SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE SPORE GERMINATION LIPOPROTEIN YHCN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: YHCN, BSU09150; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR KEYWDS SPORULATION, GERMINATION, RING-BUILDING MOTIF, RBM, SECRETION KEYWDS 2 SYSTEMS, YHCN, SPOIIIAG, SPOIIQ, SPOIIIAH, BACILLUS SUBTILIS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR B.LIU,H.CHAN,E.BAUDA,C.CONTRERAS-MARTEL,L.BELLARD,A.M.VILLARD,C.MAS, AUTHOR 2 E.NEUMANN,D.FENEL,A.FAVIER,M.SERRANO,A.O.H.HENRIQUES, AUTHOR 3 C.D.A.RODRIGUES,C.MORLOT REVDAT 3 19-JUN-24 7PEG 1 REMARK REVDAT 2 07-SEP-22 7PEG 1 JRNL REVDAT 1 24-AUG-22 7PEG 0 JRNL AUTH B.LIU,H.CHAN,E.BAUDA,C.CONTRERAS-MARTEL,L.BELLARD, JRNL AUTH 2 A.M.VILLARD,C.MAS,E.NEUMANN,D.FENEL,A.FAVIER,M.SERRANO, JRNL AUTH 3 A.O.HENRIQUES,C.D.A.RODRIGUES,C.MORLOT JRNL TITL STRUCTURAL INSIGHTS INTO RING-BUILDING MOTIF DOMAINS JRNL TITL 2 INVOLVED IN BACTERIAL SPORULATION. JRNL REF J.STRUCT.BIOL. V. 214 07813 2022 JRNL REFN ESSN 1095-8657 JRNL PMID 34808342 JRNL DOI 10.1016/J.JSB.2021.107813 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 20958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1095 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1522 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3810 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1672 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.15000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : 0.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.724 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1698 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1623 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2293 ; 1.193 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3770 ; 1.285 ; 1.595 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 216 ; 5.861 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;37.567 ;24.409 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 308 ;14.540 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;16.098 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 225 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1917 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 322 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 81 186 B 81 186 3042 0.130 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7PEG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1292117559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 7.3-7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22053 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 41.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.630 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.76 REMARK 200 R MERGE FOR SHELL (I) : 0.55700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: ARCIMBOLDO REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NEEDLE-SHAPED CRYSTALS, DIMENSIONS OF ABOUT 20 X 20 X 100 REMARK 200 MICROMETERS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 17.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5, 20% (W/V) PEG REMARK 280 8,000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.74000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.06500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.14000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.06500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.74000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.14000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 ASP A 25 REMARK 465 GLN A 26 REMARK 465 GLY A 27 REMARK 465 GLU A 28 REMARK 465 GLY A 29 REMARK 465 ARG A 30 REMARK 465 ARG A 31 REMARK 465 ASP A 32 REMARK 465 ASN A 33 REMARK 465 ASN A 34 REMARK 465 ASP A 35 REMARK 465 VAL A 36 REMARK 465 ARG A 37 REMARK 465 ASN A 38 REMARK 465 VAL A 39 REMARK 465 ASN A 40 REMARK 465 TYR A 41 REMARK 465 ARG A 42 REMARK 465 ASN A 43 REMARK 465 PRO A 44 REMARK 465 ALA A 45 REMARK 465 ASN A 46 REMARK 465 ASP A 47 REMARK 465 ASP A 48 REMARK 465 MET A 49 REMARK 465 ARG A 50 REMARK 465 ASN A 51 REMARK 465 VAL A 52 REMARK 465 ASN A 53 REMARK 465 ASN A 54 REMARK 465 ARG A 55 REMARK 465 ASP A 56 REMARK 465 ASN A 57 REMARK 465 VAL A 58 REMARK 465 ASP A 59 REMARK 465 ASN A 60 REMARK 465 ASN A 61 REMARK 465 VAL A 62 REMARK 465 ASN A 63 REMARK 465 ASP A 64 REMARK 465 ASN A 65 REMARK 465 VAL A 66 REMARK 465 ASN A 67 REMARK 465 ASN A 68 REMARK 465 ASN A 69 REMARK 465 ARG A 70 REMARK 465 VAL A 71 REMARK 465 ASN A 72 REMARK 465 ASP A 73 REMARK 465 ASP A 74 REMARK 465 ASN A 75 REMARK 465 ASN A 76 REMARK 465 ASN A 77 REMARK 465 ASP A 78 REMARK 465 ALA A 188 REMARK 465 GLU A 189 REMARK 465 SER B 23 REMARK 465 ALA B 24 REMARK 465 ASP B 25 REMARK 465 GLN B 26 REMARK 465 GLY B 27 REMARK 465 GLU B 28 REMARK 465 GLY B 29 REMARK 465 ARG B 30 REMARK 465 ARG B 31 REMARK 465 ASP B 32 REMARK 465 ASN B 33 REMARK 465 ASN B 34 REMARK 465 ASP B 35 REMARK 465 VAL B 36 REMARK 465 ARG B 37 REMARK 465 ASN B 38 REMARK 465 VAL B 39 REMARK 465 ASN B 40 REMARK 465 TYR B 41 REMARK 465 ARG B 42 REMARK 465 ASN B 43 REMARK 465 PRO B 44 REMARK 465 ALA B 45 REMARK 465 ASN B 46 REMARK 465 ASP B 47 REMARK 465 ASP B 48 REMARK 465 MET B 49 REMARK 465 ARG B 50 REMARK 465 ASN B 51 REMARK 465 VAL B 52 REMARK 465 ASN B 53 REMARK 465 ASN B 54 REMARK 465 ARG B 55 REMARK 465 ASP B 56 REMARK 465 ASN B 57 REMARK 465 VAL B 58 REMARK 465 ASP B 59 REMARK 465 ASN B 60 REMARK 465 ASN B 61 REMARK 465 VAL B 62 REMARK 465 ASN B 63 REMARK 465 ASP B 64 REMARK 465 ASN B 65 REMARK 465 VAL B 66 REMARK 465 ASN B 67 REMARK 465 ASN B 68 REMARK 465 ASN B 69 REMARK 465 ARG B 70 REMARK 465 VAL B 71 REMARK 465 ASN B 72 REMARK 465 ASP B 73 REMARK 465 ASP B 74 REMARK 465 ASN B 75 REMARK 465 ASN B 76 REMARK 465 ASN B 77 REMARK 465 ASP B 78 REMARK 465 ARG B 79 REMARK 465 LYS B 80 REMARK 465 ALA B 188 REMARK 465 GLU B 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 187 CG OD1 ND2 REMARK 470 ASN B 187 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 249 O HOH A 262 1455 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 84 75.31 -105.62 REMARK 500 ALA B 84 74.87 -101.24 REMARK 500 ASP B 139 109.30 -161.73 REMARK 500 ASP B 143 -87.88 -101.20 REMARK 500 ALA B 171 -88.87 -44.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 7PEG A 24 189 UNP P54598 YHCN_BACSU 24 189 DBREF 7PEG B 24 189 UNP P54598 YHCN_BACSU 24 189 SEQADV 7PEG SER A 23 UNP P54598 EXPRESSION TAG SEQADV 7PEG SER B 23 UNP P54598 EXPRESSION TAG SEQRES 1 A 167 SER ALA ASP GLN GLY GLU GLY ARG ARG ASP ASN ASN ASP SEQRES 2 A 167 VAL ARG ASN VAL ASN TYR ARG ASN PRO ALA ASN ASP ASP SEQRES 3 A 167 MET ARG ASN VAL ASN ASN ARG ASP ASN VAL ASP ASN ASN SEQRES 4 A 167 VAL ASN ASP ASN VAL ASN ASN ASN ARG VAL ASN ASP ASP SEQRES 5 A 167 ASN ASN ASN ASP ARG LYS LEU GLU VAL ALA ASP GLU ALA SEQRES 6 A 167 ALA ASP LYS VAL THR ASP LEU LYS GLU VAL LYS HIS ALA SEQRES 7 A 167 ASP ILE ILE VAL ALA GLY ASN GLN ALA TYR VAL ALA VAL SEQRES 8 A 167 VAL LEU THR ASN GLY ASN LYS GLY ALA VAL GLU ASN ASN SEQRES 9 A 167 LEU LYS LYS LYS ILE ALA LYS LYS VAL ARG SER THR ASP SEQRES 10 A 167 LYS ASN ILE ASP ASN VAL TYR VAL SER ALA ASN PRO ASP SEQRES 11 A 167 PHE VAL GLU ARG MET GLN GLY TYR GLY LYS ARG ILE GLN SEQRES 12 A 167 ASN GLY ASP PRO ILE ALA GLY LEU PHE ASP GLU PHE THR SEQRES 13 A 167 GLN THR VAL GLN ARG VAL PHE PRO ASN ALA GLU SEQRES 1 B 167 SER ALA ASP GLN GLY GLU GLY ARG ARG ASP ASN ASN ASP SEQRES 2 B 167 VAL ARG ASN VAL ASN TYR ARG ASN PRO ALA ASN ASP ASP SEQRES 3 B 167 MET ARG ASN VAL ASN ASN ARG ASP ASN VAL ASP ASN ASN SEQRES 4 B 167 VAL ASN ASP ASN VAL ASN ASN ASN ARG VAL ASN ASP ASP SEQRES 5 B 167 ASN ASN ASN ASP ARG LYS LEU GLU VAL ALA ASP GLU ALA SEQRES 6 B 167 ALA ASP LYS VAL THR ASP LEU LYS GLU VAL LYS HIS ALA SEQRES 7 B 167 ASP ILE ILE VAL ALA GLY ASN GLN ALA TYR VAL ALA VAL SEQRES 8 B 167 VAL LEU THR ASN GLY ASN LYS GLY ALA VAL GLU ASN ASN SEQRES 9 B 167 LEU LYS LYS LYS ILE ALA LYS LYS VAL ARG SER THR ASP SEQRES 10 B 167 LYS ASN ILE ASP ASN VAL TYR VAL SER ALA ASN PRO ASP SEQRES 11 B 167 PHE VAL GLU ARG MET GLN GLY TYR GLY LYS ARG ILE GLN SEQRES 12 B 167 ASN GLY ASP PRO ILE ALA GLY LEU PHE ASP GLU PHE THR SEQRES 13 B 167 GLN THR VAL GLN ARG VAL PHE PRO ASN ALA GLU FORMUL 3 HOH *126(H2 O) HELIX 1 AA1 ALA A 84 THR A 92 1 9 HELIX 2 AA2 GLU A 124 SER A 137 1 14 HELIX 3 AA3 ASN A 150 GLY A 167 1 18 HELIX 4 AA4 PRO A 169 GLY A 172 5 4 HELIX 5 AA5 LEU A 173 PHE A 185 1 13 HELIX 6 AA6 ALA B 84 ASP B 93 1 10 HELIX 7 AA7 GLU B 124 SER B 137 1 14 HELIX 8 AA8 ASN B 150 ASN B 166 1 17 HELIX 9 AA9 PRO B 169 PHE B 185 1 17 SHEET 1 AA1 4 GLU A 82 VAL A 83 0 SHEET 2 AA1 4 VAL A 97 ALA A 105 -1 O VAL A 104 N GLU A 82 SHEET 3 AA1 4 GLN A 108 LEU A 115 -1 O GLN A 108 N ALA A 105 SHEET 4 AA1 4 ASN A 144 SER A 148 1 O TYR A 146 N VAL A 111 SHEET 1 AA2 4 GLU B 82 VAL B 83 0 SHEET 2 AA2 4 VAL B 97 ALA B 105 -1 O VAL B 104 N GLU B 82 SHEET 3 AA2 4 GLN B 108 LEU B 115 -1 O ALA B 112 N ASP B 101 SHEET 4 AA2 4 VAL B 145 SER B 148 1 O TYR B 146 N VAL B 111 CRYST1 31.480 52.280 134.130 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031766 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007455 0.00000