data_7PGK # _entry.id 7PGK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.353 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7PGK pdb_00007pgk 10.2210/pdb7pgk/pdb WWPDB D_1292116025 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7PGK _pdbx_database_status.recvd_initial_deposition_date 2021-08-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Griffiths, S.C.' 1 0000-0002-9257-7354 'Schwab, R.A.' 2 ? 'El Omari, K.' 3 0000-0003-3506-6045 'Bishop, B.' 4 0000-0002-1854-7480 'Iverson, E.J.' 5 ? 'Malinuskas, T.' 6 0000-0002-4847-5529 'Dubey, R.' 7 0000-0002-0687-5831 'Qian, M.' 8 ? 'Covey, D.F.' 9 ? 'Gilbert, R.J.C.' 10 0000-0001-9336-5604 'Rohatgi, R.' 11 0000-0001-7609-8858 'Siebold, C.' 12 0000-0002-6635-3621 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 7171 _citation.page_last 7171 _citation.title 'Hedgehog-Interacting Protein is a multimodal antagonist of Hedgehog signalling.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-27475-2 _citation.pdbx_database_id_PubMed 34887403 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Griffiths, S.C.' 1 ? primary 'Schwab, R.A.' 2 ? primary 'El Omari, K.' 3 ? primary 'Bishop, B.' 4 ? primary 'Iverson, E.J.' 5 ? primary 'Malinauskas, T.' 6 ? primary 'Dubey, R.' 7 ? primary 'Qian, M.' 8 ? primary 'Covey, D.F.' 9 ? primary 'Gilbert, R.J.C.' 10 ? primary 'Rohatgi, R.' 11 ? primary 'Siebold, C.' 12 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7PGK _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.240 _cell.length_a_esd ? _cell.length_b 60.240 _cell.length_b_esd ? _cell.length_c 108.480 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hedgehog-interacting protein' 21085.137 1 ? ? ? ;HHIP-N, the N-terminal domain of HHIP, recombinantly expressed in and purified from HEK293T cells using the pHLsec vector for mammalian secretion ; 2 branched man '1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose' 982.803 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HHIP,HIP # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ETGCLNGNPPKRLKRRDRRMMSQLELLSGGEMLCGGFYPRLSCCLRSDSPGLGRLENKIFSVTNNTECGKLLEEIKCALC SPHSQSLFHSPEREVLERDLVLPLLCKDYCKEFFYTCRGHIPGFLQTTADEFCFYYARKDGGLCFPDFPRKQVRGPASNY LDQMEEYDKVEEISGTKHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;ETGCLNGNPPKRLKRRDRRMMSQLELLSGGEMLCGGFYPRLSCCLRSDSPGLGRLENKIFSVTNNTECGKLLEEIKCALC SPHSQSLFHSPEREVLERDLVLPLLCKDYCKEFFYTCRGHIPGFLQTTADEFCFYYARKDGGLCFPDFPRKQVRGPASNY LDQMEEYDKVEEISGTKHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 GLY n 1 4 CYS n 1 5 LEU n 1 6 ASN n 1 7 GLY n 1 8 ASN n 1 9 PRO n 1 10 PRO n 1 11 LYS n 1 12 ARG n 1 13 LEU n 1 14 LYS n 1 15 ARG n 1 16 ARG n 1 17 ASP n 1 18 ARG n 1 19 ARG n 1 20 MET n 1 21 MET n 1 22 SER n 1 23 GLN n 1 24 LEU n 1 25 GLU n 1 26 LEU n 1 27 LEU n 1 28 SER n 1 29 GLY n 1 30 GLY n 1 31 GLU n 1 32 MET n 1 33 LEU n 1 34 CYS n 1 35 GLY n 1 36 GLY n 1 37 PHE n 1 38 TYR n 1 39 PRO n 1 40 ARG n 1 41 LEU n 1 42 SER n 1 43 CYS n 1 44 CYS n 1 45 LEU n 1 46 ARG n 1 47 SER n 1 48 ASP n 1 49 SER n 1 50 PRO n 1 51 GLY n 1 52 LEU n 1 53 GLY n 1 54 ARG n 1 55 LEU n 1 56 GLU n 1 57 ASN n 1 58 LYS n 1 59 ILE n 1 60 PHE n 1 61 SER n 1 62 VAL n 1 63 THR n 1 64 ASN n 1 65 ASN n 1 66 THR n 1 67 GLU n 1 68 CYS n 1 69 GLY n 1 70 LYS n 1 71 LEU n 1 72 LEU n 1 73 GLU n 1 74 GLU n 1 75 ILE n 1 76 LYS n 1 77 CYS n 1 78 ALA n 1 79 LEU n 1 80 CYS n 1 81 SER n 1 82 PRO n 1 83 HIS n 1 84 SER n 1 85 GLN n 1 86 SER n 1 87 LEU n 1 88 PHE n 1 89 HIS n 1 90 SER n 1 91 PRO n 1 92 GLU n 1 93 ARG n 1 94 GLU n 1 95 VAL n 1 96 LEU n 1 97 GLU n 1 98 ARG n 1 99 ASP n 1 100 LEU n 1 101 VAL n 1 102 LEU n 1 103 PRO n 1 104 LEU n 1 105 LEU n 1 106 CYS n 1 107 LYS n 1 108 ASP n 1 109 TYR n 1 110 CYS n 1 111 LYS n 1 112 GLU n 1 113 PHE n 1 114 PHE n 1 115 TYR n 1 116 THR n 1 117 CYS n 1 118 ARG n 1 119 GLY n 1 120 HIS n 1 121 ILE n 1 122 PRO n 1 123 GLY n 1 124 PHE n 1 125 LEU n 1 126 GLN n 1 127 THR n 1 128 THR n 1 129 ALA n 1 130 ASP n 1 131 GLU n 1 132 PHE n 1 133 CYS n 1 134 PHE n 1 135 TYR n 1 136 TYR n 1 137 ALA n 1 138 ARG n 1 139 LYS n 1 140 ASP n 1 141 GLY n 1 142 GLY n 1 143 LEU n 1 144 CYS n 1 145 PHE n 1 146 PRO n 1 147 ASP n 1 148 PHE n 1 149 PRO n 1 150 ARG n 1 151 LYS n 1 152 GLN n 1 153 VAL n 1 154 ARG n 1 155 GLY n 1 156 PRO n 1 157 ALA n 1 158 SER n 1 159 ASN n 1 160 TYR n 1 161 LEU n 1 162 ASP n 1 163 GLN n 1 164 MET n 1 165 GLU n 1 166 GLU n 1 167 TYR n 1 168 ASP n 1 169 LYS n 1 170 VAL n 1 171 GLU n 1 172 GLU n 1 173 ILE n 1 174 SER n 1 175 GLY n 1 176 THR n 1 177 LYS n 1 178 HIS n 1 179 HIS n 1 180 HIS n 1 181 HIS n 1 182 HIS n 1 183 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 183 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HHIP, HIP, UNQ5825/PRO19644' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293T _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHLsec _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HHIP_HUMAN _struct_ref.pdbx_db_accession Q96QV1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CLNGNPPKRLKRRDRRMMSQLELLSGGEMLCGGFYPRLSCCLRSDSPGLGRLENKIFSVTNNTECGKLLEEIKCALCSPH SQSLFHSPEREVLERDLVLPLLCKDYCKEFFYTCRGHIPGFLQTTADEFCFYYARKDGGLCFPDFPRKQVRGPASNYLDQ MEEYDKVEEIS ; _struct_ref.pdbx_align_begin 39 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7PGK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96QV1 _struct_ref_seq.db_align_beg 39 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 209 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 39 _struct_ref_seq.pdbx_auth_seq_align_end 209 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7PGK GLU A 1 ? UNP Q96QV1 ? ? 'expression tag' 36 1 1 7PGK THR A 2 ? UNP Q96QV1 ? ? 'expression tag' 37 2 1 7PGK GLY A 3 ? UNP Q96QV1 ? ? 'expression tag' 38 3 1 7PGK GLY A 175 ? UNP Q96QV1 ? ? 'expression tag' 210 4 1 7PGK THR A 176 ? UNP Q96QV1 ? ? 'expression tag' 211 5 1 7PGK LYS A 177 ? UNP Q96QV1 ? ? 'expression tag' 212 6 1 7PGK HIS A 178 ? UNP Q96QV1 ? ? 'expression tag' 213 7 1 7PGK HIS A 179 ? UNP Q96QV1 ? ? 'expression tag' 214 8 1 7PGK HIS A 180 ? UNP Q96QV1 ? ? 'expression tag' 215 9 1 7PGK HIS A 181 ? UNP Q96QV1 ? ? 'expression tag' 216 10 1 7PGK HIS A 182 ? UNP Q96QV1 ? ? 'expression tag' 217 11 1 7PGK HIS A 183 ? UNP Q96QV1 ? ? 'expression tag' 218 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GU4 'D-saccharide, alpha linking' n 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose '2,3,4,6-tetra-O-sulfonato-alpha-D-glucose; 2,3,4,6-tetra-O-sulfonato-D-glucose; 2,3,4,6-tetra-O-sulfonato-glucose' 'C6 H12 O18 S4' 500.409 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YYJ 'D-saccharide, beta linking' n 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose ? 'C6 H12 O18 S4' 500.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7PGK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M imidazole/MES pH 6.5, 0.1 M carboxylic acids (0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M sodium citrate, 0.02 M sodium oxamate and 0.02 M potassium sodium tartrate), 10% w/v PEG 20000 and 20% v/v PEG MME 550 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-10-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9762 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9762 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 107.32 _reflns.entry_id 7PGK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.75 _reflns.d_resolution_low 54.20 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5609 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_Rmerge_I_obs 0.113 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.85 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 534 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.4 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -3.92050 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][2] -3.92050 _refine.aniso_B[2][3] 0.00000 _refine.aniso_B[3][3] 7.84090 _refine.B_iso_max ? _refine.B_iso_mean 102.29 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.909 _refine.correlation_coeff_Fo_to_Fc_free 0.845 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7PGK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.75 _refine.ls_d_res_low 54.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5609 _refine.ls_number_reflns_R_free 288 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.0 _refine.ls_percent_reflns_R_free 5.130 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.268 _refine.ls_R_factor_R_free 0.286 _refine.ls_R_factor_R_free_error 0.000 _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.267 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.331 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.343 _refine.pdbx_overall_SU_R_Blow_DPI 0.698 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.592 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 7PGK _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.53 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.75 _refine_hist.d_res_low 54.00 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1019 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 964 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1049 ? t_bond_d 2.00 HARMONIC 'X-RAY DIFFRACTION' ? 0.90 ? 1425 ? t_angle_deg 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 492 ? t_dihedral_angle_d 2.00 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 20 ? t_trig_c_planes 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 143 ? t_gen_planes 5.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1049 ? t_it 20.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? 1.94 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 3.00 ? ? ? t_other_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 125 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1074 ? t_ideal_dist_contact 4.00 SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.75 _refine_ls_shell.d_res_low 3.07 _refine_ls_shell.number_reflns_all 1535 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_R_work 1456 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free 5.15 _refine_ls_shell.R_factor_all 0.283 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.271 _refine_ls_shell.R_factor_R_free_error 0.000 _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7PGK _struct.title 'HHIP-N, the N-terminal domain of the Hedgehog-Interacting Protein (HHIP), in complex with glycosaminoglycan mimic SOS' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7PGK _struct_keywords.text 'HHIP, Hedgehog, morphogen, signalling, glycosaminoglycan, cholesterol, palmitate, secreted, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 14 ? GLN A 23 ? LYS A 49 GLN A 58 1 ? 10 HELX_P HELX_P2 AA2 THR A 66 ? CYS A 77 ? THR A 101 CYS A 112 1 ? 12 HELX_P HELX_P3 AA3 ALA A 78 ? CYS A 80 ? ALA A 113 CYS A 115 5 ? 3 HELX_P HELX_P4 AA4 HIS A 83 ? HIS A 89 ? HIS A 118 HIS A 124 1 ? 7 HELX_P HELX_P5 AA5 LYS A 107 ? CYS A 117 ? LYS A 142 CYS A 152 1 ? 11 HELX_P HELX_P6 AA6 ILE A 121 ? LEU A 125 ? ILE A 156 LEU A 160 5 ? 5 HELX_P HELX_P7 AA7 THR A 128 ? TYR A 136 ? THR A 163 TYR A 171 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 39 A CYS 78 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf2 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 69 A CYS 112 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? A CYS 44 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 79 A CYS 115 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 117 SG ? ? A CYS 103 A CYS 152 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? A CYS 106 SG ? ? ? 1_555 A CYS 144 SG ? ? A CYS 141 A CYS 179 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf6 disulf ? ? A CYS 110 SG ? ? ? 1_555 A CYS 133 SG ? ? A CYS 145 A CYS 168 1_555 ? ? ? ? ? ? ? 2.038 ? ? covale1 covale both ? B GU4 . C1 ? ? ? 1_555 B YYJ . O2 ? ? C GU4 1 C YYJ 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 145 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 180 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 146 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 181 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.82 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 11 ? ARG A 12 ? LYS A 46 ARG A 47 AA1 2 LEU A 41 ? SER A 42 ? LEU A 76 SER A 77 AA2 1 LEU A 105 ? CYS A 106 ? LEU A 140 CYS A 141 AA2 2 ALA A 137 ? ARG A 138 ? ALA A 172 ARG A 173 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 11 ? N LYS A 46 O SER A 42 ? O SER A 77 AA2 1 2 N LEU A 105 ? N LEU A 140 O ARG A 138 ? O ARG A 173 # _atom_sites.entry_id 7PGK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016600 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016600 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009218 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 36 36 GLU GLU A . n A 1 2 THR 2 37 37 THR THR A . n A 1 3 GLY 3 38 38 GLY GLY A . n A 1 4 CYS 4 39 39 CYS CYS A . n A 1 5 LEU 5 40 40 LEU LEU A . n A 1 6 ASN 6 41 41 ASN ASN A . n A 1 7 GLY 7 42 42 GLY GLY A . n A 1 8 ASN 8 43 43 ASN ASN A . n A 1 9 PRO 9 44 44 PRO PRO A . n A 1 10 PRO 10 45 45 PRO PRO A . n A 1 11 LYS 11 46 46 LYS LYS A . n A 1 12 ARG 12 47 47 ARG ARG A . n A 1 13 LEU 13 48 48 LEU LEU A . n A 1 14 LYS 14 49 49 LYS LYS A . n A 1 15 ARG 15 50 50 ARG ARG A . n A 1 16 ARG 16 51 51 ARG ARG A . n A 1 17 ASP 17 52 52 ASP ASP A . n A 1 18 ARG 18 53 53 ARG ARG A . n A 1 19 ARG 19 54 54 ARG ARG A . n A 1 20 MET 20 55 55 MET MET A . n A 1 21 MET 21 56 56 MET MET A . n A 1 22 SER 22 57 57 SER SER A . n A 1 23 GLN 23 58 58 GLN GLN A . n A 1 24 LEU 24 59 59 LEU LEU A . n A 1 25 GLU 25 60 60 GLU GLU A . n A 1 26 LEU 26 61 ? ? ? A . n A 1 27 LEU 27 62 ? ? ? A . n A 1 28 SER 28 63 ? ? ? A . n A 1 29 GLY 29 64 ? ? ? A . n A 1 30 GLY 30 65 ? ? ? A . n A 1 31 GLU 31 66 66 GLU GLU A . n A 1 32 MET 32 67 67 MET MET A . n A 1 33 LEU 33 68 68 LEU LEU A . n A 1 34 CYS 34 69 69 CYS CYS A . n A 1 35 GLY 35 70 70 GLY GLY A . n A 1 36 GLY 36 71 71 GLY GLY A . n A 1 37 PHE 37 72 72 PHE PHE A . n A 1 38 TYR 38 73 73 TYR TYR A . n A 1 39 PRO 39 74 74 PRO PRO A . n A 1 40 ARG 40 75 75 ARG ARG A . n A 1 41 LEU 41 76 76 LEU LEU A . n A 1 42 SER 42 77 77 SER SER A . n A 1 43 CYS 43 78 78 CYS CYS A . n A 1 44 CYS 44 79 79 CYS CYS A . n A 1 45 LEU 45 80 80 LEU LEU A . n A 1 46 ARG 46 81 81 ARG ARG A . n A 1 47 SER 47 82 82 SER SER A . n A 1 48 ASP 48 83 ? ? ? A . n A 1 49 SER 49 84 ? ? ? A . n A 1 50 PRO 50 85 ? ? ? A . n A 1 51 GLY 51 86 ? ? ? A . n A 1 52 LEU 52 87 ? ? ? A . n A 1 53 GLY 53 88 ? ? ? A . n A 1 54 ARG 54 89 ? ? ? A . n A 1 55 LEU 55 90 ? ? ? A . n A 1 56 GLU 56 91 ? ? ? A . n A 1 57 ASN 57 92 ? ? ? A . n A 1 58 LYS 58 93 ? ? ? A . n A 1 59 ILE 59 94 ? ? ? A . n A 1 60 PHE 60 95 ? ? ? A . n A 1 61 SER 61 96 ? ? ? A . n A 1 62 VAL 62 97 ? ? ? A . n A 1 63 THR 63 98 ? ? ? A . n A 1 64 ASN 64 99 ? ? ? A . n A 1 65 ASN 65 100 100 ASN ASN A . n A 1 66 THR 66 101 101 THR THR A . n A 1 67 GLU 67 102 102 GLU GLU A . n A 1 68 CYS 68 103 103 CYS CYS A . n A 1 69 GLY 69 104 104 GLY GLY A . n A 1 70 LYS 70 105 105 LYS LYS A . n A 1 71 LEU 71 106 106 LEU LEU A . n A 1 72 LEU 72 107 107 LEU LEU A . n A 1 73 GLU 73 108 108 GLU GLU A . n A 1 74 GLU 74 109 109 GLU GLU A . n A 1 75 ILE 75 110 110 ILE ILE A . n A 1 76 LYS 76 111 111 LYS LYS A . n A 1 77 CYS 77 112 112 CYS CYS A . n A 1 78 ALA 78 113 113 ALA ALA A . n A 1 79 LEU 79 114 114 LEU LEU A . n A 1 80 CYS 80 115 115 CYS CYS A . n A 1 81 SER 81 116 116 SER SER A . n A 1 82 PRO 82 117 117 PRO PRO A . n A 1 83 HIS 83 118 118 HIS HIS A . n A 1 84 SER 84 119 119 SER SER A . n A 1 85 GLN 85 120 120 GLN GLN A . n A 1 86 SER 86 121 121 SER SER A . n A 1 87 LEU 87 122 122 LEU LEU A . n A 1 88 PHE 88 123 123 PHE PHE A . n A 1 89 HIS 89 124 124 HIS HIS A . n A 1 90 SER 90 125 125 SER SER A . n A 1 91 PRO 91 126 ? ? ? A . n A 1 92 GLU 92 127 ? ? ? A . n A 1 93 ARG 93 128 ? ? ? A . n A 1 94 GLU 94 129 ? ? ? A . n A 1 95 VAL 95 130 ? ? ? A . n A 1 96 LEU 96 131 ? ? ? A . n A 1 97 GLU 97 132 ? ? ? A . n A 1 98 ARG 98 133 133 ARG ARG A . n A 1 99 ASP 99 134 134 ASP ASP A . n A 1 100 LEU 100 135 135 LEU LEU A . n A 1 101 VAL 101 136 136 VAL VAL A . n A 1 102 LEU 102 137 137 LEU LEU A . n A 1 103 PRO 103 138 138 PRO PRO A . n A 1 104 LEU 104 139 139 LEU LEU A . n A 1 105 LEU 105 140 140 LEU LEU A . n A 1 106 CYS 106 141 141 CYS CYS A . n A 1 107 LYS 107 142 142 LYS LYS A . n A 1 108 ASP 108 143 143 ASP ASP A . n A 1 109 TYR 109 144 144 TYR TYR A . n A 1 110 CYS 110 145 145 CYS CYS A . n A 1 111 LYS 111 146 146 LYS LYS A . n A 1 112 GLU 112 147 147 GLU GLU A . n A 1 113 PHE 113 148 148 PHE PHE A . n A 1 114 PHE 114 149 149 PHE PHE A . n A 1 115 TYR 115 150 150 TYR TYR A . n A 1 116 THR 116 151 151 THR THR A . n A 1 117 CYS 117 152 152 CYS CYS A . n A 1 118 ARG 118 153 153 ARG ARG A . n A 1 119 GLY 119 154 154 GLY GLY A . n A 1 120 HIS 120 155 155 HIS HIS A . n A 1 121 ILE 121 156 156 ILE ILE A . n A 1 122 PRO 122 157 157 PRO PRO A . n A 1 123 GLY 123 158 158 GLY GLY A . n A 1 124 PHE 124 159 159 PHE PHE A . n A 1 125 LEU 125 160 160 LEU LEU A . n A 1 126 GLN 126 161 161 GLN GLN A . n A 1 127 THR 127 162 162 THR THR A . n A 1 128 THR 128 163 163 THR THR A . n A 1 129 ALA 129 164 164 ALA ALA A . n A 1 130 ASP 130 165 165 ASP ASP A . n A 1 131 GLU 131 166 166 GLU GLU A . n A 1 132 PHE 132 167 167 PHE PHE A . n A 1 133 CYS 133 168 168 CYS CYS A . n A 1 134 PHE 134 169 169 PHE PHE A . n A 1 135 TYR 135 170 170 TYR TYR A . n A 1 136 TYR 136 171 171 TYR TYR A . n A 1 137 ALA 137 172 172 ALA ALA A . n A 1 138 ARG 138 173 173 ARG ARG A . n A 1 139 LYS 139 174 174 LYS LYS A . n A 1 140 ASP 140 175 175 ASP ASP A . n A 1 141 GLY 141 176 176 GLY GLY A . n A 1 142 GLY 142 177 177 GLY GLY A . n A 1 143 LEU 143 178 178 LEU LEU A . n A 1 144 CYS 144 179 179 CYS CYS A . n A 1 145 PHE 145 180 180 PHE PHE A . n A 1 146 PRO 146 181 181 PRO PRO A . n A 1 147 ASP 147 182 182 ASP ASP A . n A 1 148 PHE 148 183 183 PHE PHE A . n A 1 149 PRO 149 184 184 PRO PRO A . n A 1 150 ARG 150 185 ? ? ? A . n A 1 151 LYS 151 186 ? ? ? A . n A 1 152 GLN 152 187 ? ? ? A . n A 1 153 VAL 153 188 ? ? ? A . n A 1 154 ARG 154 189 ? ? ? A . n A 1 155 GLY 155 190 ? ? ? A . n A 1 156 PRO 156 191 ? ? ? A . n A 1 157 ALA 157 192 ? ? ? A . n A 1 158 SER 158 193 ? ? ? A . n A 1 159 ASN 159 194 ? ? ? A . n A 1 160 TYR 160 195 ? ? ? A . n A 1 161 LEU 161 196 ? ? ? A . n A 1 162 ASP 162 197 ? ? ? A . n A 1 163 GLN 163 198 ? ? ? A . n A 1 164 MET 164 199 ? ? ? A . n A 1 165 GLU 165 200 ? ? ? A . n A 1 166 GLU 166 201 ? ? ? A . n A 1 167 TYR 167 202 ? ? ? A . n A 1 168 ASP 168 203 ? ? ? A . n A 1 169 LYS 169 204 ? ? ? A . n A 1 170 VAL 170 205 ? ? ? A . n A 1 171 GLU 171 206 ? ? ? A . n A 1 172 GLU 172 207 ? ? ? A . n A 1 173 ILE 173 208 ? ? ? A . n A 1 174 SER 174 209 ? ? ? A . n A 1 175 GLY 175 210 ? ? ? A . n A 1 176 THR 176 211 ? ? ? A . n A 1 177 LYS 177 212 ? ? ? A . n A 1 178 HIS 178 213 ? ? ? A . n A 1 179 HIS 179 214 ? ? ? A . n A 1 180 HIS 180 215 ? ? ? A . n A 1 181 HIS 181 216 ? ? ? A . n A 1 182 HIS 182 217 ? ? ? A . n A 1 183 HIS 183 218 ? ? ? A . n # _pdbx_molecule_features.prd_id PRD_900013 _pdbx_molecule_features.name 'sucrose octasulfate' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900013 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 310 ? 1 MORE -5 ? 1 'SSA (A^2)' 8770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-12-15 2 'Structure model' 1 1 2021-12-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_PubMed' 9 2 'Structure model' '_citation.title' 10 2 'Structure model' '_citation.year' 11 2 'Structure model' '_citation_author.identifier_ORCID' 12 2 'Structure model' '_citation_author.name' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -15.6739 _pdbx_refine_tls.origin_y -12.3290 _pdbx_refine_tls.origin_z -22.0729 _pdbx_refine_tls.T[1][1] -0.2355 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0946 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0364 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.1204 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0731 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] -0.0777 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 4.5765 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 3.2835 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 4.0403 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.3743 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 3.8330 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 6.2208 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0007 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.1305 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0218 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.1292 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0486 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0314 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0449 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0587 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0479 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '{ A|36 - A|184 }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _pdbx_entry_details.entry_id 7PGK _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NH2 A ARG 51 ? ? 1_555 NH2 A ARG 51 ? ? 8_555 1.24 2 1 CZ A ARG 51 ? ? 1_555 NH2 A ARG 51 ? ? 8_555 1.89 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 61 ? A LEU 26 2 1 Y 1 A LEU 62 ? A LEU 27 3 1 Y 1 A SER 63 ? A SER 28 4 1 Y 1 A GLY 64 ? A GLY 29 5 1 Y 1 A GLY 65 ? A GLY 30 6 1 Y 1 A ASP 83 ? A ASP 48 7 1 Y 1 A SER 84 ? A SER 49 8 1 Y 1 A PRO 85 ? A PRO 50 9 1 Y 1 A GLY 86 ? A GLY 51 10 1 Y 1 A LEU 87 ? A LEU 52 11 1 Y 1 A GLY 88 ? A GLY 53 12 1 Y 1 A ARG 89 ? A ARG 54 13 1 Y 1 A LEU 90 ? A LEU 55 14 1 Y 1 A GLU 91 ? A GLU 56 15 1 Y 1 A ASN 92 ? A ASN 57 16 1 Y 1 A LYS 93 ? A LYS 58 17 1 Y 1 A ILE 94 ? A ILE 59 18 1 Y 1 A PHE 95 ? A PHE 60 19 1 Y 1 A SER 96 ? A SER 61 20 1 Y 1 A VAL 97 ? A VAL 62 21 1 Y 1 A THR 98 ? A THR 63 22 1 Y 1 A ASN 99 ? A ASN 64 23 1 Y 1 A PRO 126 ? A PRO 91 24 1 Y 1 A GLU 127 ? A GLU 92 25 1 Y 1 A ARG 128 ? A ARG 93 26 1 Y 1 A GLU 129 ? A GLU 94 27 1 Y 1 A VAL 130 ? A VAL 95 28 1 Y 1 A LEU 131 ? A LEU 96 29 1 Y 1 A GLU 132 ? A GLU 97 30 1 Y 1 A ARG 185 ? A ARG 150 31 1 Y 1 A LYS 186 ? A LYS 151 32 1 Y 1 A GLN 187 ? A GLN 152 33 1 Y 1 A VAL 188 ? A VAL 153 34 1 Y 1 A ARG 189 ? A ARG 154 35 1 Y 1 A GLY 190 ? A GLY 155 36 1 Y 1 A PRO 191 ? A PRO 156 37 1 Y 1 A ALA 192 ? A ALA 157 38 1 Y 1 A SER 193 ? A SER 158 39 1 Y 1 A ASN 194 ? A ASN 159 40 1 Y 1 A TYR 195 ? A TYR 160 41 1 Y 1 A LEU 196 ? A LEU 161 42 1 Y 1 A ASP 197 ? A ASP 162 43 1 Y 1 A GLN 198 ? A GLN 163 44 1 Y 1 A MET 199 ? A MET 164 45 1 Y 1 A GLU 200 ? A GLU 165 46 1 Y 1 A GLU 201 ? A GLU 166 47 1 Y 1 A TYR 202 ? A TYR 167 48 1 Y 1 A ASP 203 ? A ASP 168 49 1 Y 1 A LYS 204 ? A LYS 169 50 1 Y 1 A VAL 205 ? A VAL 170 51 1 Y 1 A GLU 206 ? A GLU 171 52 1 Y 1 A GLU 207 ? A GLU 172 53 1 Y 1 A ILE 208 ? A ILE 173 54 1 Y 1 A SER 209 ? A SER 174 55 1 Y 1 A GLY 210 ? A GLY 175 56 1 Y 1 A THR 211 ? A THR 176 57 1 Y 1 A LYS 212 ? A LYS 177 58 1 Y 1 A HIS 213 ? A HIS 178 59 1 Y 1 A HIS 214 ? A HIS 179 60 1 Y 1 A HIS 215 ? A HIS 180 61 1 Y 1 A HIS 216 ? A HIS 181 62 1 Y 1 A HIS 217 ? A HIS 182 63 1 Y 1 A HIS 218 ? A HIS 183 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Cancer Research UK' 'United Kingdom' C20724/A14414 1 'Cancer Research UK' 'United Kingdom' C20724/A26752 2 'European Research Council (ERC)' 'United Kingdom' 647278 3 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' HL067773 4 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' GM118082 5 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' GM106078 6 'Wellcome Trust' 'United Kingdom' 099675/Z/12/Z 7 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GU4 1 C GU4 1 B SCR 1 n B 2 YYJ 2 C YYJ 2 B SCR 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU4 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcp[2S,3S,4S,6S]a' GU4 'COMMON NAME' GMML 1.0 2-sulfo-3-sulfo-4-sulfo-6-sulfo-a-D-glucopyranose GU4 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp2SO33SO34SO36SO3 # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 ;WURCS=2.0/2,2,1/[ha122h-2b_2-5_1*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O][a2122h-1a_1-5_2*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O]/1-2/a2-b1 ; WURCS PDB2Glycan 1.1.0 2 2 '[][b-D-Fruf1SO33SO34SO36SO3]{[(2+1)][a-D-Glcp2SO33SO34SO36SO3]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GU4 _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 YYJ _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GU4 1 n 2 YYJ 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 GU4 ? ? GU4 ? ? 'SUBJECT OF INVESTIGATION' ? 2 YYJ ? ? YYJ ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Peaks corresponding to HHIP-N monomers (major) and dimers (minor) were observed via SEC-MALS' #