HEADER SIGNALING PROTEIN 06-SEP-21 7PNC TITLE DARK STATE STRUCTURE OF SENSORY RHODOPSIN II SOLVED BY SERIAL TITLE 2 MILLISECOND CRYSTALLOGRAPHY CAVEAT 7PNC BOG A 303 HAS WRONG CHIRALITY AT ATOM C3 BOG A 303 HAS WRONG CAVEAT 2 7PNC CHIRALITY AT ATOM C4 BOG A 304 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 7PNC C3 BOG A 304 HAS WRONG CHIRALITY AT ATOM C4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SENSORY RHODOPSIN-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SENSORY RHODOPSIN II,SR-II; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NATRONOMONAS PHARAONIS; SOURCE 3 ORGANISM_COMMON: NATRONOBACTERIUM PHARAONIS; SOURCE 4 ORGANISM_TAXID: 2257; SOURCE 5 GENE: SOP2, SOPII; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SRII, SERIAL MILLISECOND CRYSTALLOGRAPHY, SENSORY RHODOPSIN, SENSORY KEYWDS 2 RHODOPSIN II, SMX, SSX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.BOSMAN,G.ORTOLANI,G.BRANDEN,R.NEUTZE REVDAT 2 31-JAN-24 7PNC 1 REMARK REVDAT 1 14-SEP-22 7PNC 0 JRNL AUTH R.BOSMAN,G.ORTOLANI,G.BRANDEN,R.NEUTZE JRNL TITL STRUCTURAL BASIS OF THE PROLONGED PHOTOCYCLE OF SENSORY JRNL TITL 2 RHODOPSIN II REVEALED BY SERIAL MILLISECOND CRYSTALLOGRAPHY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 781 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4400 - 4.0000 1.00 2602 149 0.1781 0.1891 REMARK 3 2 4.0000 - 3.1700 1.00 2508 126 0.1650 0.1765 REMARK 3 3 3.1700 - 2.7700 1.00 2481 129 0.1740 0.2066 REMARK 3 4 2.7700 - 2.5200 1.00 2466 131 0.1849 0.2125 REMARK 3 5 2.5200 - 2.3400 1.00 2476 119 0.2100 0.2541 REMARK 3 6 2.3400 - 2.2000 1.00 2415 127 0.2466 0.2579 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.199 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1995 REMARK 3 ANGLE : 0.803 2672 REMARK 3 CHIRALITY : 0.039 328 REMARK 3 PLANARITY : 0.004 293 REMARK 3 DIHEDRAL : 19.727 381 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 33.0001 37.1843 2.1600 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.1694 REMARK 3 T33: 0.1550 T12: 0.0068 REMARK 3 T13: -0.0154 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.0635 L22: 1.0858 REMARK 3 L33: 1.3509 L12: -0.0704 REMARK 3 L13: -0.5601 L23: 0.0527 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: -0.0693 S13: -0.0266 REMARK 3 S21: 0.0434 S22: -0.0418 S23: -0.0486 REMARK 3 S31: -0.0692 S32: 0.1315 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7PNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292116590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000342 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18087 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 39.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 242.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H68 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CACL 150MM, GLYCINE 100MM, 38%(V/V) REMARK 280 PEG 400, PH 7.5, LIPIDIC CUBIC PHASE, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 25.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.87500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.85000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.87500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.85000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.50000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.87500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.85000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 25.50000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.87500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.85000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 404 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 220 REMARK 465 ALA A 221 REMARK 465 GLU A 222 REMARK 465 HIS A 223 REMARK 465 GLY A 224 REMARK 465 GLU A 225 REMARK 465 SER A 226 REMARK 465 LEU A 227 REMARK 465 ALA A 228 REMARK 465 GLY A 229 REMARK 465 VAL A 230 REMARK 465 ASP A 231 REMARK 465 THR A 232 REMARK 465 ASP A 233 REMARK 465 ALA A 234 REMARK 465 PRO A 235 REMARK 465 ALA A 236 REMARK 465 VAL A 237 REMARK 465 ALA A 238 REMARK 465 ASP A 239 REMARK 465 GLU A 240 REMARK 465 ASN A 241 REMARK 465 SER A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 HIS A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 31 OG REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 27 -72.68 -37.76 REMARK 500 ALA A 29 78.54 37.68 REMARK 500 ALA A 64 -105.43 57.17 REMARK 500 ALA A 186 42.90 22.13 REMARK 500 LEU A 187 -76.41 -68.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MPG A 311 REMARK 610 MPG A 314 REMARK 610 BOG A 315 DBREF 7PNC A 1 239 UNP P42196 BACS2_NATPH 1 239 SEQADV 7PNC GLU A 240 UNP P42196 EXPRESSION TAG SEQADV 7PNC ASN A 241 UNP P42196 EXPRESSION TAG SEQADV 7PNC SER A 242 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 243 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 244 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 245 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 246 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 247 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 248 UNP P42196 EXPRESSION TAG SEQADV 7PNC HIS A 249 UNP P42196 EXPRESSION TAG SEQRES 1 A 249 MET VAL GLY LEU THR THR LEU PHE TRP LEU GLY ALA ILE SEQRES 2 A 249 GLY MET LEU VAL GLY THR LEU ALA PHE ALA TRP ALA GLY SEQRES 3 A 249 ARG ASP ALA GLY SER GLY GLU ARG ARG TYR TYR VAL THR SEQRES 4 A 249 LEU VAL GLY ILE SER GLY ILE ALA ALA VAL ALA TYR VAL SEQRES 5 A 249 VAL MET ALA LEU GLY VAL GLY TRP VAL PRO VAL ALA GLU SEQRES 6 A 249 ARG THR VAL PHE ALA PRO ARG TYR ILE ASP TRP ILE LEU SEQRES 7 A 249 THR THR PRO LEU ILE VAL TYR PHE LEU GLY LEU LEU ALA SEQRES 8 A 249 GLY LEU ASP SER ARG GLU PHE GLY ILE VAL ILE THR LEU SEQRES 9 A 249 ASN THR VAL VAL MET LEU ALA GLY PHE ALA GLY ALA MET SEQRES 10 A 249 VAL PRO GLY ILE GLU ARG TYR ALA LEU PHE GLY MET GLY SEQRES 11 A 249 ALA VAL ALA PHE LEU GLY LEU VAL TYR TYR LEU VAL GLY SEQRES 12 A 249 PRO MET THR GLU SER ALA SER GLN ARG SER SER GLY ILE SEQRES 13 A 249 LYS SER LEU TYR VAL ARG LEU ARG ASN LEU THR VAL ILE SEQRES 14 A 249 LEU TRP ALA ILE TYR PRO PHE ILE TRP LEU LEU GLY PRO SEQRES 15 A 249 PRO GLY VAL ALA LEU LEU THR PRO THR VAL ASP VAL ALA SEQRES 16 A 249 LEU ILE VAL TYR LEU ASP LEU VAL THR LYS VAL GLY PHE SEQRES 17 A 249 GLY PHE ILE ALA LEU ASP ALA ALA ALA THR LEU ARG ALA SEQRES 18 A 249 GLU HIS GLY GLU SER LEU ALA GLY VAL ASP THR ASP ALA SEQRES 19 A 249 PRO ALA VAL ALA ASP GLU ASN SER HIS HIS HIS HIS HIS SEQRES 20 A 249 HIS HIS HET RET A 301 48 HET CL A 302 1 HET BOG A 303 48 HET BOG A 304 48 HET BOG A 305 48 HET MPG A 306 65 HET BOG A 307 48 HET BOG A 308 48 HET MPG A 309 65 HET MPG A 310 65 HET MPG A 311 43 HET MPG A 312 65 HET BOG A 313 48 HET MPG A 314 49 HET BOG A 315 35 HET BOG A 316 48 HET CL A 317 1 HETNAM RET RETINAL HETNAM CL CHLORIDE ION HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETNAM MPG [(Z)-OCTADEC-9-ENYL] (2R)-2,3-BIS(OXIDANYL)PROPANOATE HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE FORMUL 2 RET C20 H28 O FORMUL 3 CL 2(CL 1-) FORMUL 4 BOG 8(C14 H28 O6) FORMUL 7 MPG 6(C21 H40 O4) FORMUL 19 HOH *38(H2 O) HELIX 1 AA1 GLY A 3 GLY A 26 1 24 HELIX 2 AA2 GLU A 33 LEU A 56 1 24 HELIX 3 AA3 ALA A 70 GLY A 92 1 23 HELIX 4 AA4 ASP A 94 MET A 117 1 24 HELIX 5 AA5 ILE A 121 GLY A 143 1 23 HELIX 6 AA6 GLY A 143 SER A 150 1 8 HELIX 7 AA7 SER A 153 ALA A 172 1 20 HELIX 8 AA8 ILE A 173 GLY A 181 1 9 HELIX 9 AA9 THR A 189 LEU A 219 1 31 SHEET 1 AA1 2 TRP A 60 VAL A 63 0 SHEET 2 AA1 2 ARG A 66 PHE A 69 -1 O VAL A 68 N VAL A 61 LINK NZ LYS A 205 C15 RET A 301 1555 1555 1.43 CRYST1 89.750 131.700 51.000 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011142 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019608 0.00000