HEADER HYDROLASE 09-SEP-21 7POO TITLE CRYSTAL STRUCTURE OF PROFRAGILYSIN-3 (PROBFT-3) FROM BACTEROIDES TITLE 2 FRAGILIS IN COMPLEX WITH FOLIOSIDINE IN P212121. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BFT-3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METALLOPROTEASE,METALLOPROTEASE ENTEROTOXIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: PROBFT-3 (A18-D397) WITH A TEV-CLEAVABLE N-TERMINAL COMPND 7 HIS6-TAG. AFFINITY TAG WAS REMOVED PRIOR CRYSTALLIZATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 817; SOURCE 4 GENE: BFT-3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PROTEASE, ZYMOGEN, PROTEOLYSIS, ENTEROTOXIN, FRAGILYSIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR U.ECKHARD,T.GUEVARA,F.X.GOMIS-RUTH REVDAT 3 31-JAN-24 7POO 1 REMARK REVDAT 2 26-OCT-22 7POO 1 JRNL REVDAT 1 14-SEP-22 7POO 0 JRNL AUTH A.JIMENEZ-ALESANCO,U.ECKHARD,M.ASENCIO DEL RIO,S.VEGA, JRNL AUTH 2 T.GUEVARA,A.VELAZQUEZ-CAMPOY,F.X.GOMIS-RUTH,O.ABIAN JRNL TITL REPOSITIONING SMALL MOLECULE DRUGS AS ALLOSTERIC INHIBITORS JRNL TITL 2 OF THE BFT-3 TOXIN FROM ENTEROTOXIGENIC BACTEROIDES JRNL TITL 3 FRAGILIS. JRNL REF PROTEIN SCI. V. 31 E4427 2022 JRNL REFN ESSN 1469-896X JRNL PMID 36173175 JRNL DOI 10.1002/PRO.4427 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.GOULAS,J.L.AROLAS,F.X.GOMIS-RUTH REMARK 1 TITL STRUCTURE, FUNCTION AND LATENCY REGULATION OF A BACTERIAL REMARK 1 TITL 2 ENTEROTOXIN POTENTIALLY DERIVED FROM A MAMMALIAN REMARK 1 TITL 3 ADAMALYSIN/ADAM XENOLOG. REMARK 1 REF PROC NATL ACAD SCI U S A V. 108 1856 2011 REMARK 1 REFN ESSN 1091-6490 REMARK 1 PMID 21233422 REMARK 1 DOI 10.1073/PNAS.1012173108 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (6-FEB-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 25317 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 706 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.73 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.84 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2956 REMARK 3 BIN FREE R VALUE : 0.2223 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 18 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5499 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 95 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.47700 REMARK 3 B22 (A**2) : 20.08370 REMARK 3 B33 (A**2) : -15.60660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.430 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.914 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.308 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.861 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.311 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5695 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7707 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2627 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1002 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5695 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 731 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : 5 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4500 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.03 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|34 - 201} REMARK 3 ORIGIN FOR THE GROUP (A): 9.3674 -15.4214 -39.3508 REMARK 3 T TENSOR REMARK 3 T11: -0.3235 T22: -0.1301 REMARK 3 T33: 0.4059 T12: -0.0624 REMARK 3 T13: 0.0407 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 2.9884 L22: 3.8253 REMARK 3 L33: 3.8695 L12: -0.0577 REMARK 3 L13: 0.2266 L23: 0.1364 REMARK 3 S TENSOR REMARK 3 S11: 0.0421 S12: -0.0311 S13: 0.3238 REMARK 3 S21: -0.0311 S22: 0.0087 S23: -0.3206 REMARK 3 S31: 0.3238 S32: -0.3206 S33: -0.0508 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|211 - 355} REMARK 3 ORIGIN FOR THE GROUP (A): 21.1602 -3.6819 -24.7261 REMARK 3 T TENSOR REMARK 3 T11: -0.2938 T22: -0.0953 REMARK 3 T33: 0.2358 T12: 0.0303 REMARK 3 T13: 0.016 T23: -0.0738 REMARK 3 L TENSOR REMARK 3 L11: 2.7795 L22: 3.533 REMARK 3 L33: 1.8144 L12: -0.289 REMARK 3 L13: 0.0678 L23: 0.4562 REMARK 3 S TENSOR REMARK 3 S11: -0.2075 S12: 0.4029 S13: -0.0402 REMARK 3 S21: 0.4029 S22: 0.1461 S23: 0.0779 REMARK 3 S31: -0.0402 S32: 0.0779 S33: 0.0613 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|356 - 397} REMARK 3 ORIGIN FOR THE GROUP (A): 5.0484 -1.3412 -18.6133 REMARK 3 T TENSOR REMARK 3 T11: -0.3395 T22: -0.0647 REMARK 3 T33: 0.4907 T12: 0.0436 REMARK 3 T13: 0.2453 T23: -0.1173 REMARK 3 L TENSOR REMARK 3 L11: 2.3555 L22: 12.3005 REMARK 3 L33: 4.4182 L12: 2.1032 REMARK 3 L13: -0.018 L23: -1.1484 REMARK 3 S TENSOR REMARK 3 S11: 0.2439 S12: 1.0639 S13: 0.0461 REMARK 3 S21: 1.0639 S22: -0.2816 S23: -0.4799 REMARK 3 S31: 0.0461 S32: -0.4799 S33: 0.0377 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|34 - 193} REMARK 3 ORIGIN FOR THE GROUP (A): 33.6591 7.2448 -53.672 REMARK 3 T TENSOR REMARK 3 T11: -0.3217 T22: -0.1201 REMARK 3 T33: 0.2912 T12: -0.0305 REMARK 3 T13: -0.0192 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 4.2164 L22: 4.0585 REMARK 3 L33: 4.2005 L12: 0.2633 REMARK 3 L13: -0.8465 L23: 0.3813 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: -0.3865 S13: -0.2145 REMARK 3 S21: -0.3865 S22: -0.0195 S23: 0.3824 REMARK 3 S31: -0.2145 S32: 0.3824 S33: -0.0048 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {B|214 - 355} REMARK 3 ORIGIN FOR THE GROUP (A): 17.2453 0.257 -69.0267 REMARK 3 T TENSOR REMARK 3 T11: -0.2251 T22: -0.2704 REMARK 3 T33: 0.1436 T12: -0.0045 REMARK 3 T13: -0.1609 T23: -0.0923 REMARK 3 L TENSOR REMARK 3 L11: 4.5606 L22: 5.1495 REMARK 3 L33: 3.7505 L12: 0.18 REMARK 3 L13: 0.8201 L23: -0.1259 REMARK 3 S TENSOR REMARK 3 S11: 0.0183 S12: -0.6592 S13: 0.157 REMARK 3 S21: -0.6592 S22: -0.105 S23: -0.0915 REMARK 3 S31: 0.157 S32: -0.0915 S33: 0.0867 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {B|356 - 397} REMARK 3 ORIGIN FOR THE GROUP (A): 16.273 17.8874 -71.0959 REMARK 3 T TENSOR REMARK 3 T11: 0.0475 T22: -0.2459 REMARK 3 T33: 0.1489 T12: 0.081 REMARK 3 T13: -0.2263 T23: 0.1414 REMARK 3 L TENSOR REMARK 3 L11: 2.9683 L22: 8.5894 REMARK 3 L33: 5.0269 L12: 1.7085 REMARK 3 L13: 1.6597 L23: 1.4445 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: -0.972 S13: -0.7458 REMARK 3 S21: -0.972 S22: 0.0634 S23: -0.1396 REMARK 3 S31: -0.7458 S32: -0.1396 S33: -0.0605 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7POO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292118064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25344 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 157.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.18400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.96200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3P24 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % (W/V) PEG 3350 0.2 M AMMONIUM REMARK 280 ACETATE 0.1M BIS TRIS PH 5.5 CRYOPROTECTION BY SOAKING FOR 15-30 REMARK 280 SECONDS IN MOTHER LIQUOR SUPPLEMENTED WITH 2.5M L-PROLINE., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.77500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.74000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.53000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.74000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.77500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.53000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 GLY A 8 REMARK 465 GLU A 9 REMARK 465 ASN A 10 REMARK 465 LEU A 11 REMARK 465 TYR A 12 REMARK 465 PHE A 13 REMARK 465 GLN A 14 REMARK 465 GLY A 15 REMARK 465 ALA A 16 REMARK 465 MET A 17 REMARK 465 ALA A 18 REMARK 465 CYS A 19 REMARK 465 SER A 20 REMARK 465 ASN A 21 REMARK 465 GLU A 22 REMARK 465 ALA A 23 REMARK 465 ASP A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 THR A 28 REMARK 465 SER A 29 REMARK 465 ILE A 30 REMARK 465 ASP A 31 REMARK 465 ALA A 32 REMARK 465 PRO A 33 REMARK 465 THR A 163 REMARK 465 ARG A 164 REMARK 465 SER A 165 REMARK 465 PRO A 202 REMARK 465 HIS A 203 REMARK 465 GLY A 204 REMARK 465 ILE A 205 REMARK 465 THR A 206 REMARK 465 GLU A 207 REMARK 465 SER A 208 REMARK 465 GLN A 209 REMARK 465 THR A 210 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 GLY B 8 REMARK 465 GLU B 9 REMARK 465 ASN B 10 REMARK 465 LEU B 11 REMARK 465 TYR B 12 REMARK 465 PHE B 13 REMARK 465 GLN B 14 REMARK 465 GLY B 15 REMARK 465 ALA B 16 REMARK 465 MET B 17 REMARK 465 ALA B 18 REMARK 465 CYS B 19 REMARK 465 SER B 20 REMARK 465 ASN B 21 REMARK 465 GLU B 22 REMARK 465 ALA B 23 REMARK 465 ASP B 24 REMARK 465 SER B 25 REMARK 465 LEU B 26 REMARK 465 THR B 27 REMARK 465 THR B 28 REMARK 465 SER B 29 REMARK 465 ILE B 30 REMARK 465 ASP B 31 REMARK 465 ALA B 32 REMARK 465 PRO B 33 REMARK 465 THR B 163 REMARK 465 ARG B 164 REMARK 465 SER B 165 REMARK 465 ALA B 166 REMARK 465 GLY B 167 REMARK 465 ASP B 194 REMARK 465 TYR B 195 REMARK 465 ILE B 196 REMARK 465 LYS B 197 REMARK 465 THR B 198 REMARK 465 PRO B 199 REMARK 465 GLN B 200 REMARK 465 VAL B 201 REMARK 465 PRO B 202 REMARK 465 HIS B 203 REMARK 465 GLY B 204 REMARK 465 ILE B 205 REMARK 465 THR B 206 REMARK 465 GLU B 207 REMARK 465 SER B 208 REMARK 465 GLN B 209 REMARK 465 THR B 210 REMARK 465 ARG B 211 REMARK 465 ALA B 212 REMARK 465 VAL B 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 42 24.32 -160.43 REMARK 500 ASN A 150 54.45 -102.44 REMARK 500 ASP A 160 98.70 -66.03 REMARK 500 LYS A 168 -32.48 -137.36 REMARK 500 PRO A 199 44.57 -80.40 REMARK 500 GLN A 200 -47.64 -136.40 REMARK 500 HIS A 252 32.96 39.86 REMARK 500 SER B 42 26.51 -157.72 REMARK 500 ARG B 71 114.25 -174.54 REMARK 500 ILE B 192 -96.46 -137.71 REMARK 500 HIS B 252 33.08 39.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 194 OD1 REMARK 620 2 ASP A 194 OD2 68.6 REMARK 620 3 HIS A 348 NE2 152.3 90.4 REMARK 620 4 HIS A 352 NE2 98.9 99.5 102.3 REMARK 620 5 HIS A 358 NE2 87.2 150.7 105.9 100.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7PND RELATED DB: PDB REMARK 900 7PND CONTAINS THE SAME PROTEIN BUT WITHOUT A SMALL MOLECULE BOUND. DBREF 7POO A 18 397 UNP O86049 O86049_BACFG 18 397 DBREF 7POO B 18 397 UNP O86049 O86049_BACFG 18 397 SEQADV 7POO MET A -4 UNP O86049 INITIATING METHIONINE SEQADV 7POO GLY A -3 UNP O86049 EXPRESSION TAG SEQADV 7POO SER A -2 UNP O86049 EXPRESSION TAG SEQADV 7POO SER A -1 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 0 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 1 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 2 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 3 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 4 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS A 5 UNP O86049 EXPRESSION TAG SEQADV 7POO SER A 6 UNP O86049 EXPRESSION TAG SEQADV 7POO SER A 7 UNP O86049 EXPRESSION TAG SEQADV 7POO GLY A 8 UNP O86049 EXPRESSION TAG SEQADV 7POO GLU A 9 UNP O86049 EXPRESSION TAG SEQADV 7POO ASN A 10 UNP O86049 EXPRESSION TAG SEQADV 7POO LEU A 11 UNP O86049 EXPRESSION TAG SEQADV 7POO TYR A 12 UNP O86049 EXPRESSION TAG SEQADV 7POO PHE A 13 UNP O86049 EXPRESSION TAG SEQADV 7POO GLN A 14 UNP O86049 EXPRESSION TAG SEQADV 7POO GLY A 15 UNP O86049 EXPRESSION TAG SEQADV 7POO ALA A 16 UNP O86049 EXPRESSION TAG SEQADV 7POO MET A 17 UNP O86049 EXPRESSION TAG SEQADV 7POO MET B -4 UNP O86049 INITIATING METHIONINE SEQADV 7POO GLY B -3 UNP O86049 EXPRESSION TAG SEQADV 7POO SER B -2 UNP O86049 EXPRESSION TAG SEQADV 7POO SER B -1 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 0 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 1 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 2 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 3 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 4 UNP O86049 EXPRESSION TAG SEQADV 7POO HIS B 5 UNP O86049 EXPRESSION TAG SEQADV 7POO SER B 6 UNP O86049 EXPRESSION TAG SEQADV 7POO SER B 7 UNP O86049 EXPRESSION TAG SEQADV 7POO GLY B 8 UNP O86049 EXPRESSION TAG SEQADV 7POO GLU B 9 UNP O86049 EXPRESSION TAG SEQADV 7POO ASN B 10 UNP O86049 EXPRESSION TAG SEQADV 7POO LEU B 11 UNP O86049 EXPRESSION TAG SEQADV 7POO TYR B 12 UNP O86049 EXPRESSION TAG SEQADV 7POO PHE B 13 UNP O86049 EXPRESSION TAG SEQADV 7POO GLN B 14 UNP O86049 EXPRESSION TAG SEQADV 7POO GLY B 15 UNP O86049 EXPRESSION TAG SEQADV 7POO ALA B 16 UNP O86049 EXPRESSION TAG SEQADV 7POO MET B 17 UNP O86049 EXPRESSION TAG SEQRES 1 A 402 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 402 GLU ASN LEU TYR PHE GLN GLY ALA MET ALA CYS SER ASN SEQRES 3 A 402 GLU ALA ASP SER LEU THR THR SER ILE ASP ALA PRO VAL SEQRES 4 A 402 THR ALA SER ILE ASP LEU GLN SER VAL SER TYR THR ASP SEQRES 5 A 402 LEU ALA THR GLN LEU ASN ASP VAL SER ASP PHE GLY LYS SEQRES 6 A 402 MET ILE ILE LEU LYS ASP ASN GLY PHE ASN ARG GLN VAL SEQRES 7 A 402 HIS VAL SER MET ASP LYS ARG THR LYS ILE GLN LEU ASP SEQRES 8 A 402 ASN GLU ASN VAL ARG LEU PHE ASN GLY ARG ASP LYS ASP SEQRES 9 A 402 SER THR ASN PHE ILE LEU GLY ASP GLU PHE ALA VAL LEU SEQRES 10 A 402 ARG PHE TYR ARG ASN GLY GLU SER ILE SER TYR ILE ALA SEQRES 11 A 402 TYR LYS GLU ALA GLN MET MET ASN GLU ILE ALA GLU PHE SEQRES 12 A 402 TYR ALA ALA PRO PHE LYS LYS THR ARG ALA ILE ASN GLU SEQRES 13 A 402 LYS GLU ALA PHE GLU CYS ILE TYR ASP SER ARG THR ARG SEQRES 14 A 402 SER ALA GLY LYS TYR PRO VAL SER VAL LYS ILE ASN VAL SEQRES 15 A 402 ASP LYS ALA LYS LYS ILE LEU ASN LEU PRO GLU CYS ASP SEQRES 16 A 402 TYR ILE ASN ASP TYR ILE LYS THR PRO GLN VAL PRO HIS SEQRES 17 A 402 GLY ILE THR GLU SER GLN THR ARG ALA VAL PRO SER GLU SEQRES 18 A 402 PRO LYS THR VAL TYR VAL ILE CYS LEU ARG GLU ASN GLY SEQRES 19 A 402 SER THR VAL TYR PRO ASN GLU VAL SER ALA GLN MET GLN SEQRES 20 A 402 ASP ALA ALA ASN SER VAL TYR ALA VAL HIS GLY LEU LYS SEQRES 21 A 402 ARG TYR VAL ASN LEU HIS PHE VAL LEU TYR THR THR GLU SEQRES 22 A 402 TYR ALA CYS PRO SER GLY ASN ALA ASP GLU GLY LEU ASP SEQRES 23 A 402 GLY PHE THR ALA SER LEU LYS ALA ASN PRO LYS ALA GLU SEQRES 24 A 402 GLY TYR ASP ASP GLN ILE TYR PHE LEU ILE ARG TRP GLY SEQRES 25 A 402 THR TRP ASP ASN ASN ILE LEU GLY ILE SER TRP LEU ASN SEQRES 26 A 402 SER TYR ASN VAL ASN THR ALA SER ASP PHE LYS ALA SER SEQRES 27 A 402 GLY MET SER THR THR GLN LEU MET TYR PRO GLY VAL MET SEQRES 28 A 402 ALA HIS GLU LEU GLY HIS ILE LEU GLY ALA ASN HIS ALA SEQRES 29 A 402 ASP ASP PRO LYS ASP LEU MET TYR SER LYS TYR THR GLY SEQRES 30 A 402 TYR LEU PHE HIS LEU SER GLU LYS ASN MET ASP ILE ILE SEQRES 31 A 402 ALA LYS ASN LEU GLY TRP GLU ILE ALA ASP GLY ASP SEQRES 1 B 402 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 402 GLU ASN LEU TYR PHE GLN GLY ALA MET ALA CYS SER ASN SEQRES 3 B 402 GLU ALA ASP SER LEU THR THR SER ILE ASP ALA PRO VAL SEQRES 4 B 402 THR ALA SER ILE ASP LEU GLN SER VAL SER TYR THR ASP SEQRES 5 B 402 LEU ALA THR GLN LEU ASN ASP VAL SER ASP PHE GLY LYS SEQRES 6 B 402 MET ILE ILE LEU LYS ASP ASN GLY PHE ASN ARG GLN VAL SEQRES 7 B 402 HIS VAL SER MET ASP LYS ARG THR LYS ILE GLN LEU ASP SEQRES 8 B 402 ASN GLU ASN VAL ARG LEU PHE ASN GLY ARG ASP LYS ASP SEQRES 9 B 402 SER THR ASN PHE ILE LEU GLY ASP GLU PHE ALA VAL LEU SEQRES 10 B 402 ARG PHE TYR ARG ASN GLY GLU SER ILE SER TYR ILE ALA SEQRES 11 B 402 TYR LYS GLU ALA GLN MET MET ASN GLU ILE ALA GLU PHE SEQRES 12 B 402 TYR ALA ALA PRO PHE LYS LYS THR ARG ALA ILE ASN GLU SEQRES 13 B 402 LYS GLU ALA PHE GLU CYS ILE TYR ASP SER ARG THR ARG SEQRES 14 B 402 SER ALA GLY LYS TYR PRO VAL SER VAL LYS ILE ASN VAL SEQRES 15 B 402 ASP LYS ALA LYS LYS ILE LEU ASN LEU PRO GLU CYS ASP SEQRES 16 B 402 TYR ILE ASN ASP TYR ILE LYS THR PRO GLN VAL PRO HIS SEQRES 17 B 402 GLY ILE THR GLU SER GLN THR ARG ALA VAL PRO SER GLU SEQRES 18 B 402 PRO LYS THR VAL TYR VAL ILE CYS LEU ARG GLU ASN GLY SEQRES 19 B 402 SER THR VAL TYR PRO ASN GLU VAL SER ALA GLN MET GLN SEQRES 20 B 402 ASP ALA ALA ASN SER VAL TYR ALA VAL HIS GLY LEU LYS SEQRES 21 B 402 ARG TYR VAL ASN LEU HIS PHE VAL LEU TYR THR THR GLU SEQRES 22 B 402 TYR ALA CYS PRO SER GLY ASN ALA ASP GLU GLY LEU ASP SEQRES 23 B 402 GLY PHE THR ALA SER LEU LYS ALA ASN PRO LYS ALA GLU SEQRES 24 B 402 GLY TYR ASP ASP GLN ILE TYR PHE LEU ILE ARG TRP GLY SEQRES 25 B 402 THR TRP ASP ASN ASN ILE LEU GLY ILE SER TRP LEU ASN SEQRES 26 B 402 SER TYR ASN VAL ASN THR ALA SER ASP PHE LYS ALA SER SEQRES 27 B 402 GLY MET SER THR THR GLN LEU MET TYR PRO GLY VAL MET SEQRES 28 B 402 ALA HIS GLU LEU GLY HIS ILE LEU GLY ALA ASN HIS ALA SEQRES 29 B 402 ASP ASP PRO LYS ASP LEU MET TYR SER LYS TYR THR GLY SEQRES 30 B 402 TYR LEU PHE HIS LEU SER GLU LYS ASN MET ASP ILE ILE SEQRES 31 B 402 ALA LYS ASN LEU GLY TRP GLU ILE ALA ASP GLY ASP HET ZN A 401 1 HET 7WK A 402 22 HET ACT A 403 4 HET ZN B 401 1 HET 7WK B 402 22 HET ZN B 403 1 HET ZN B 404 1 HET PGE B 405 10 HET PRO B 406 8 HET PRO B 407 8 HETNAM ZN ZINC ION HETNAM 7WK FOLIOSIDINE HETNAM ACT ACETATE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM PRO PROLINE HETSYN 7WK 4-METHOXY-1-METHYL-8-[(2~{R})-3-METHYL-2,3- HETSYN 2 7WK BIS(OXIDANYL)BUTOXY]QUINOLIN-2-ONE FORMUL 3 ZN 4(ZN 2+) FORMUL 4 7WK 2(C16 H21 N O5) FORMUL 5 ACT C2 H3 O2 1- FORMUL 10 PGE C6 H14 O4 FORMUL 11 PRO 2(C5 H9 N O2) FORMUL 13 HOH *95(H2 O) HELIX 1 AA1 SER A 44 ASN A 53 1 10 HELIX 2 AA2 ARG A 96 SER A 100 5 5 HELIX 3 AA3 GLU A 128 THR A 146 1 19 HELIX 4 AA4 ASN A 150 ALA A 154 1 5 HELIX 5 AA5 VAL A 177 ASN A 185 1 9 HELIX 6 AA6 TYR A 233 ALA A 250 1 18 HELIX 7 AA7 GLY A 253 ARG A 256 5 4 HELIX 8 AA8 ASN A 275 ALA A 289 1 15 HELIX 9 AA9 ASN A 290 GLU A 294 5 5 HELIX 10 AB1 GLY A 344 LEU A 354 1 11 HELIX 11 AB2 SER A 378 LEU A 389 1 12 HELIX 12 AB3 GLU A 392 GLY A 396 5 5 HELIX 13 AB4 SER B 44 VAL B 55 1 12 HELIX 14 AB5 ARG B 96 SER B 100 5 5 HELIX 15 AB6 GLU B 128 THR B 146 1 19 HELIX 16 AB7 ASN B 150 ALA B 154 1 5 HELIX 17 AB8 VAL B 177 ASN B 185 1 9 HELIX 18 AB9 TYR B 233 ALA B 250 1 18 HELIX 19 AC1 GLY B 253 ARG B 256 5 4 HELIX 20 AC2 ASN B 275 ALA B 289 1 15 HELIX 21 AC3 ASN B 290 GLU B 294 5 5 HELIX 22 AC4 GLY B 344 LEU B 354 1 11 HELIX 23 AC5 SER B 378 LEU B 389 1 12 HELIX 24 AC6 GLU B 392 GLY B 396 5 5 SHEET 1 AA1 9 ALA A 36 ASP A 39 0 SHEET 2 AA1 9 LYS A 60 LYS A 65 1 O LYS A 65 N ILE A 38 SHEET 3 AA1 9 ASN A 70 MET A 77 -1 O ARG A 71 N LEU A 64 SHEET 4 AA1 9 GLU A 88 ASN A 94 -1 O ASN A 94 N SER A 76 SHEET 5 AA1 9 ASN A 102 LEU A 105 -1 O LEU A 105 N ARG A 91 SHEET 6 AA1 9 PHE A 109 ARG A 116 -1 O ARG A 113 N ASN A 102 SHEET 7 AA1 9 GLU A 119 TYR A 126 -1 O ALA A 125 N ALA A 110 SHEET 8 AA1 9 PRO A 170 ASN A 176 -1 O ILE A 175 N SER A 122 SHEET 9 AA1 9 PHE A 155 TYR A 159 -1 N GLU A 156 O LYS A 174 SHEET 1 AA211 ALA A 36 ASP A 39 0 SHEET 2 AA211 LYS A 60 LYS A 65 1 O LYS A 65 N ILE A 38 SHEET 3 AA211 ASN A 70 MET A 77 -1 O ARG A 71 N LEU A 64 SHEET 4 AA211 GLU A 88 ASN A 94 -1 O ASN A 94 N SER A 76 SHEET 5 AA211 LYS A 82 LEU A 85 -1 N ILE A 83 O VAL A 90 SHEET 6 AA211 VAL A 258 THR A 266 1 O PHE A 262 N LYS A 82 SHEET 7 AA211 LYS A 218 ARG A 226 1 N ARG A 226 O TYR A 265 SHEET 8 AA211 ILE A 300 ARG A 305 1 O ILE A 300 N ILE A 223 SHEET 9 AA211 SER A 333 THR A 337 1 O SER A 336 N LEU A 303 SHEET 10 AA211 GLY A 315 TRP A 318 -1 N ILE A 316 O MET A 335 SHEET 11 AA211 TYR A 195 ILE A 196 1 N ILE A 196 O SER A 317 SHEET 1 AA3 9 ALA B 36 ASP B 39 0 SHEET 2 AA3 9 LYS B 60 ASP B 66 1 O LYS B 65 N ILE B 38 SHEET 3 AA3 9 PHE B 69 MET B 77 -1 O ARG B 71 N LEU B 64 SHEET 4 AA3 9 ARG B 91 ASN B 94 -1 O ASN B 94 N SER B 76 SHEET 5 AA3 9 ASN B 102 LEU B 105 -1 O LEU B 105 N ARG B 91 SHEET 6 AA3 9 PHE B 109 ARG B 116 -1 O ARG B 113 N ASN B 102 SHEET 7 AA3 9 GLU B 119 TYR B 126 -1 O ALA B 125 N ALA B 110 SHEET 8 AA3 9 PRO B 170 ASN B 176 -1 O ILE B 175 N SER B 122 SHEET 9 AA3 9 PHE B 155 TYR B 159 -1 N GLU B 156 O LYS B 174 SHEET 1 AA4 7 GLU B 88 ASN B 89 0 SHEET 2 AA4 7 LYS B 82 LEU B 85 -1 N LEU B 85 O GLU B 88 SHEET 3 AA4 7 VAL B 258 THR B 266 1 O PHE B 262 N LYS B 82 SHEET 4 AA4 7 LYS B 218 ARG B 226 1 N ARG B 226 O TYR B 265 SHEET 5 AA4 7 ILE B 300 ARG B 305 1 O ILE B 300 N ILE B 223 SHEET 6 AA4 7 SER B 333 THR B 337 1 O SER B 336 N LEU B 303 SHEET 7 AA4 7 GLY B 315 SER B 317 -1 N ILE B 316 O MET B 335 LINK OD1 ASP A 194 ZN ZN A 401 1555 1555 1.88 LINK OD2 ASP A 194 ZN ZN A 401 1555 1555 2.02 LINK NE2 HIS A 348 ZN ZN A 401 1555 1555 2.16 LINK NE2 HIS A 352 ZN ZN A 401 1555 1555 2.08 LINK NE2 HIS A 358 ZN ZN A 401 1555 1555 2.35 LINK NE2 HIS B 358 ZN ZN B 401 1555 1555 2.58 CRYST1 69.550 83.060 157.480 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014378 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006350 0.00000