HEADER LIPID BINDING PROTEIN 10-SEP-21 7POW
TITLE CRYSTAL STRUCTURE OF PHOSPHATIDYL SERINE SYNTHASE (PSS) IN TRANSITION
TITLE 2 STATE.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PHOSPHATIDYLSERINE SYNTHASE;
COMPND 5 EC: 2.7.8.8;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC
SOURCE 3 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440);
SOURCE 4 ORGANISM_COMMON: METHANOCOCCUS JANNASCHII;
SOURCE 5 ORGANISM_TAXID: 243232;
SOURCE 6 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
SOURCE 7 GENE: PSSA, MJ1212;
SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS MEMBRANE PROTEIN, LIPID SYNTHASE, LIPID BINDING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR O.YILDIZ,M.CENTOLA
REVDAT 3 13-NOV-24 7POW 1 REMARK
REVDAT 2 01-MAR-23 7POW 1 SPRSDE
REVDAT 1 08-DEC-21 7POW 0
JRNL AUTH M.CENTOLA,H.BETZ,O.YILDIZ
JRNL TITL CRYSTAL STRUCTURES OF PHOSPHATIDYL SERINE SYNTHASE PSS
JRNL TITL 2 REVEAL THE CATALYTIC MECHANISM OF CDP-DAG ALCOHOL
JRNL TITL 3 O-PHOSPHATIDYL TRANSFERASES
JRNL REF NAT COMMUN V. 12 6982 2021
JRNL REFN ESSN 2041-1723
JRNL DOI 10.1038/S41467-021-27281-W
REMARK 2
REMARK 2 RESOLUTION. 2.51 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.19.2_4158
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.04
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.270
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 3 NUMBER OF REFLECTIONS : 30225
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.219
REMARK 3 R VALUE (WORKING SET) : 0.215
REMARK 3 FREE R VALUE : 0.276
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990
REMARK 3 FREE R VALUE TEST SET COUNT : 1508
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 38.0400 - 5.5700 0.99 2594 138 0.2771 0.3146
REMARK 3 2 5.5700 - 4.4200 1.00 2628 136 0.2271 0.3329
REMARK 3 3 4.4200 - 3.8700 1.00 2613 138 0.2125 0.2456
REMARK 3 4 3.8600 - 3.5100 1.00 2651 136 0.2090 0.2777
REMARK 3 5 3.5100 - 3.2600 1.00 2609 139 0.2058 0.2776
REMARK 3 6 3.2600 - 3.0700 1.00 2594 137 0.2083 0.2196
REMARK 3 7 3.0700 - 2.9100 1.00 2667 140 0.2064 0.2917
REMARK 3 8 2.9100 - 2.7900 1.00 2594 137 0.1894 0.2802
REMARK 3 9 2.7900 - 2.6800 1.00 2631 140 0.2036 0.2550
REMARK 3 10 2.6800 - 2.5900 0.99 2583 136 0.1712 0.2463
REMARK 3 11 2.5900 - 2.5100 0.96 2553 131 0.1975 0.2332
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.259
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.196
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 24.95
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.94
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.008 3586
REMARK 3 ANGLE : 1.000 4786
REMARK 3 CHIRALITY : 0.053 560
REMARK 3 PLANARITY : 0.008 553
REMARK 3 DIHEDRAL : 22.052 697
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: ( CHAIN A AND ( RESID 1:201 OR RESID 301:306 OR
REMARK 3 RESID 402:436 OR RESID 307:307 OR RESID 308:313 ) )
REMARK 3 OR ( CHAIN B AND ( RESID -2:201 OR RESID 301:306 OR
REMARK 3 RESID 401:418 OR RESID 307:310 OR RESID 419:430 ) )
REMARK 3 ORIGIN FOR THE GROUP (A): -5.922 6.707 49.666
REMARK 3 T TENSOR
REMARK 3 T11: 0.1468 T22: 0.1705
REMARK 3 T33: 0.1788 T12: 0.0048
REMARK 3 T13: -0.0088 T23: -0.0115
REMARK 3 L TENSOR
REMARK 3 L11: 0.5899 L22: 0.6556
REMARK 3 L33: 1.1248 L12: 0.1222
REMARK 3 L13: -0.4429 L23: -0.0476
REMARK 3 S TENSOR
REMARK 3 S11: -0.0345 S12: 0.0506 S13: -0.0238
REMARK 3 S21: 0.0167 S22: -0.0075 S23: 0.0814
REMARK 3 S31: 0.0383 S32: -0.1101 S33: 0.0325
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7POW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-SEP-21.
REMARK 100 THE DEPOSITION ID IS D_1292118075.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 02-AUG-16
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PETRA III, DESY
REMARK 200 BEAMLINE : P11
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30244
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500
REMARK 200 RESOLUTION RANGE LOW (A) : 38.040
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4
REMARK 200 DATA REDUNDANCY : 5.400
REMARK 200 R MERGE (I) : 0.15000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60
REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9
REMARK 200 DATA REDUNDANCY IN SHELL : 3.44
REMARK 200 R MERGE FOR SHELL (I) : 0.29000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.85
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: QIAGENS MBCLASS SUIT AND MBCLASS SUIT
REMARK 280 II MOLECULAR DIMENSION MEMGOLD, LIPIDIC CUBIC PHASE, TEMPERATURE
REMARK 280 300K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.67500
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.61000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.67500
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.61000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 18230 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -149.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 411 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A -2
REMARK 465 PRO A -1
REMARK 465 HIS A 0
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OG SER B 63 O SER B 306 2.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PHE A 82 50.19 -146.44
REMARK 500 SER A 134 114.05 -165.97
REMARK 500 HIS B 0 -128.40 55.30
REMARK 500 PHE B 82 49.97 -147.71
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A 443 DISTANCE = 6.75 ANGSTROMS
REMARK 525 HOH A 444 DISTANCE = 8.58 ANGSTROMS
REMARK 525 HOH B 429 DISTANCE = 6.28 ANGSTROMS
REMARK 525 HOH B 430 DISTANCE = 9.43 ANGSTROMS
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 58A B 301
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA A 302 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 41 O
REMARK 620 2 ASP A 41 OD1 75.3
REMARK 620 3 ASP A 44 OD1 62.8 109.4
REMARK 620 4 ASP A 62 OD1 139.9 71.7 108.1
REMARK 620 5 ASP A 62 OD2 157.5 122.9 96.6 51.9
REMARK 620 6 SMW A 301 O17 104.1 75.4 162.8 89.1 94.1
REMARK 620 7 SMW A 301 O65 80.8 135.8 91.1 139.3 91.4 75.1
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 303 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 41 OD1
REMARK 620 2 ASP A 62 O 151.5
REMARK 620 3 ASP A 62 OD1 76.7 76.5
REMARK 620 4 ASP A 66 OD1 87.4 107.1 139.9
REMARK 620 5 ASP A 66 OD2 99.8 73.4 95.9 50.4
REMARK 620 6 HOH A 412 O 94.5 113.9 153.3 63.0 110.5
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA B 302 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 41 O
REMARK 620 2 ASP B 41 OD1 69.1
REMARK 620 3 ASP B 44 OD1 67.5 109.3
REMARK 620 4 ASP B 62 OD1 139.6 75.8 107.8
REMARK 620 5 ASP B 62 OD2 159.8 129.1 95.4 54.1
REMARK 620 6 58A B 301 OAT 81.4 136.0 87.1 139.0 87.3
REMARK 620 7 58A B 301 OAW 102.5 81.1 160.1 91.0 90.4 74.1
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG B 303 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 41 OD1
REMARK 620 2 ASP B 62 O 160.3
REMARK 620 3 ASP B 62 OD1 76.7 86.4
REMARK 620 4 ASP B 66 OD1 91.2 97.3 145.0
REMARK 620 5 HOH B 402 O 83.4 102.2 75.8 136.0
REMARK 620 6 HOH B 403 O 97.0 102.6 154.8 58.1 79.2
REMARK 620 N 1 2 3 4 5
DBREF 7POW A 1 201 UNP Q58609 PSS_METJA 1 201
DBREF 7POW B 1 201 UNP Q58609 PSS_METJA 1 201
SEQADV 7POW ALA A -2 UNP Q58609 EXPRESSION TAG
SEQADV 7POW PRO A -1 UNP Q58609 EXPRESSION TAG
SEQADV 7POW HIS A 0 UNP Q58609 EXPRESSION TAG
SEQADV 7POW ALA B -2 UNP Q58609 EXPRESSION TAG
SEQADV 7POW PRO B -1 UNP Q58609 EXPRESSION TAG
SEQADV 7POW HIS B 0 UNP Q58609 EXPRESSION TAG
SEQRES 1 A 204 ALA PRO HIS MSE PHE SER ILE ARG LYS ILE ILE THR ILE
SEQRES 2 A 204 SER ASP TYR VAL THR MSE LEU ASN ILE ILE THR GLY LEU
SEQRES 3 A 204 LEU ALA ILE LEU LEU ASN SER PHE SER LEU ILE TYR LEU
SEQRES 4 A 204 SER ILE ILE PHE ASP SER LEU ASP GLY TYR VAL ALA ARG
SEQRES 5 A 204 LYS THR GLY THR VAL SER ASP PHE GLY ALA GLU LEU ASP
SEQRES 6 A 204 SER ILE SER ASP VAL VAL SER PHE GLY VAL ALA PRO ALA
SEQRES 7 A 204 TYR LEU LEU TYR ASN ASN PHE GLU SER ASN LEU ALA LEU
SEQRES 8 A 204 ILE SER ALA ILE ILE PHE CYS LEU CYS GLY ALA LEU ARG
SEQRES 9 A 204 LEU ALA ARG PHE GLY ILE LEU ASN VAL LYS GLY PHE ILE
SEQRES 10 A 204 GLY LEU PRO ILE PRO ALA GLY ALA LEU LEU LEU VAL GLY
SEQRES 11 A 204 PHE CYS GLN LEU ILE ASN SER TYR LEU ILE ASN SER ILE
SEQRES 12 A 204 LEU ALA ILE LEU ILE GLY LEU LEU MSE ILE SER ASP ILE
SEQRES 13 A 204 LYS TYR PRO LYS TYR PRO ASN LYS ILE PHE ILE TYR ILE
SEQRES 14 A 204 PHE ALA VAL SER LEU CYS LEU ALA ILE VAL GLY ILE PRO
SEQRES 15 A 204 HIS PHE ALA LEU MSE LEU CYS LEU ILE TYR ALA ILE TYR
SEQRES 16 A 204 GLY ILE ILE LYS TYR ILE ARG GLY ASP
SEQRES 1 B 204 ALA PRO HIS MSE PHE SER ILE ARG LYS ILE ILE THR ILE
SEQRES 2 B 204 SER ASP TYR VAL THR MSE LEU ASN ILE ILE THR GLY LEU
SEQRES 3 B 204 LEU ALA ILE LEU LEU ASN SER PHE SER LEU ILE TYR LEU
SEQRES 4 B 204 SER ILE ILE PHE ASP SER LEU ASP GLY TYR VAL ALA ARG
SEQRES 5 B 204 LYS THR GLY THR VAL SER ASP PHE GLY ALA GLU LEU ASP
SEQRES 6 B 204 SER ILE SER ASP VAL VAL SER PHE GLY VAL ALA PRO ALA
SEQRES 7 B 204 TYR LEU LEU TYR ASN ASN PHE GLU SER ASN LEU ALA LEU
SEQRES 8 B 204 ILE SER ALA ILE ILE PHE CYS LEU CYS GLY ALA LEU ARG
SEQRES 9 B 204 LEU ALA ARG PHE GLY ILE LEU ASN VAL LYS GLY PHE ILE
SEQRES 10 B 204 GLY LEU PRO ILE PRO ALA GLY ALA LEU LEU LEU VAL GLY
SEQRES 11 B 204 PHE CYS GLN LEU ILE ASN SER TYR LEU ILE ASN SER ILE
SEQRES 12 B 204 LEU ALA ILE LEU ILE GLY LEU LEU MSE ILE SER ASP ILE
SEQRES 13 B 204 LYS TYR PRO LYS TYR PRO ASN LYS ILE PHE ILE TYR ILE
SEQRES 14 B 204 PHE ALA VAL SER LEU CYS LEU ALA ILE VAL GLY ILE PRO
SEQRES 15 B 204 HIS PHE ALA LEU MSE LEU CYS LEU ILE TYR ALA ILE TYR
SEQRES 16 B 204 GLY ILE ILE LYS TYR ILE ARG GLY ASP
MODRES 7POW MSE A 1 MET MODIFIED RESIDUE
MODRES 7POW MSE A 16 MET MODIFIED RESIDUE
MODRES 7POW MSE A 149 MET MODIFIED RESIDUE
MODRES 7POW MSE A 184 MET MODIFIED RESIDUE
MODRES 7POW MSE B 1 MET MODIFIED RESIDUE
MODRES 7POW MSE B 16 MET MODIFIED RESIDUE
MODRES 7POW MSE B 149 MET MODIFIED RESIDUE
MODRES 7POW MSE B 184 MET MODIFIED RESIDUE
HET MSE A 1 8
HET MSE A 16 8
HET MSE A 149 8
HET MSE A 184 8
HET MSE B 1 8
HET MSE B 16 8
HET MSE B 149 8
HET MSE B 184 8
HET SMW A 301 75
HET CA A 302 1
HET MG A 303 1
HET CL A 304 1
HET CL A 305 1
HET CL A 306 1
HET CL A 307 1
HET OLC A 308 25
HET OLC A 309 25
HET OLC A 310 25
HET OLC A 311 25
HET OLC A 312 25
HET OLC A 313 25
HET 58A B 301 64
HET CA B 302 1
HET MG B 303 1
HET CL B 304 1
HET CL B 305 1
HET SER B 306 7
HET OLC B 307 25
HET OLC B 308 25
HET OLC B 309 25
HET OLC B 310 25
HETNAM MSE SELENOMETHIONINE
HETNAM SMW (2S)-2-AMINO-3-[[[(2R,3S,4R,5R)-5-(4-AMINO-2-OXO-
HETNAM 2 SMW PYRIMIDIN-1-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-
HETNAM 3 SMW YL]METHOXY-HYDROXY-PHOSPHORYL]OXY-[(2R)-2,3-BIS[[(Z)-
HETNAM 4 SMW OCTADEC-9-ENOYL]OXY]PROPOXY]-DIHYDROXY-LAMBDA^5-
HETNAM 5 SMW PHOSPHANYL]OXY-PROPANOIC ACID
HETNAM CA CALCIUM ION
HETNAM MG MAGNESIUM ION
HETNAM CL CHLORIDE ION
HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
HETNAM 58A 5'-O-[(R)-{[(S)-{(2R)-2,3-BIS[(9E)-OCTADEC-9-
HETNAM 2 58A ENOYLOXY]PROPOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)
HETNAM 3 58A PHOSPHORYL]CYTIDINE
HETNAM SER SERINE
HETSYN SMW (2~{S})-2-AZANYL-3-[[[(2~{R},3~{S},4~{R},5~{R})-5-(4-
HETSYN 2 SMW AZANYL-2-OXIDANYLIDENE-PYRIMIDIN-1-YL)-3,4-
HETSYN 3 SMW BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-
HETSYN 4 SMW PHOSPHORYL]OXY-[(2~{R})-2,3-BIS[[(~{Z})-OCTADEC-9-
HETSYN 5 SMW ENOYL]OXY]PROPOXY]-BIS(OXIDANYL)-$L^{5}-
HETSYN 6 SMW PHOSPHANYL]OXY-PROPANOIC ACID
HETSYN OLC 1-OLEOYL-R-GLYCEROL
HETSYN 58A CYTIDINEDIPHOSPHATE-DIOLEOYLGLYCEROL; CDP-1,2-DIOLEOYL-
HETSYN 2 58A SN-GLYCEROL
FORMUL 1 MSE 8(C5 H11 N O2 SE)
FORMUL 3 SMW C51 H92 N4 O18 P2
FORMUL 4 CA 2(CA 2+)
FORMUL 5 MG 2(MG 2+)
FORMUL 6 CL 6(CL 1-)
FORMUL 10 OLC 10(C21 H40 O4)
FORMUL 16 58A C48 H85 N3 O15 P2
FORMUL 21 SER C3 H7 N O3
FORMUL 26 HOH *74(H2 O)
HELIX 1 AA1 PHE A 2 ILE A 7 5 6
HELIX 2 AA2 THR A 9 LEU A 28 1 20
HELIX 3 AA3 SER A 30 GLY A 52 1 23
HELIX 4 AA4 SER A 55 GLY A 71 1 17
HELIX 5 AA5 GLY A 71 PHE A 82 1 12
HELIX 6 AA6 SER A 84 ILE A 107 1 24
HELIX 7 AA7 PRO A 117 ILE A 132 1 16
HELIX 8 AA8 SER A 134 ILE A 150 1 17
HELIX 9 AA9 ASN A 160 VAL A 176 1 17
HELIX 10 AB1 PRO A 179 GLY A 200 1 22
HELIX 11 AB2 PHE B 2 ILE B 8 5 7
HELIX 12 AB3 THR B 9 ASN B 29 1 21
HELIX 13 AB4 PHE B 31 GLY B 52 1 22
HELIX 14 AB5 SER B 55 GLY B 71 1 17
HELIX 15 AB6 GLY B 71 PHE B 82 1 12
HELIX 16 AB7 SER B 84 LEU B 108 1 25
HELIX 17 AB8 PRO B 117 ILE B 132 1 16
HELIX 18 AB9 SER B 134 ILE B 150 1 17
HELIX 19 AC1 ASN B 160 VAL B 176 1 17
HELIX 20 AC2 PRO B 179 GLY B 200 1 22
SHEET 1 AA1 2 PHE A 113 ILE A 114 0
SHEET 2 AA1 2 LYS A 154 TYR A 155 -1 O TYR A 155 N PHE A 113
SHEET 1 AA2 2 PHE B 113 ILE B 114 0
SHEET 2 AA2 2 LYS B 154 TYR B 155 -1 O TYR B 155 N PHE B 113
LINK C MSE A 1 N PHE A 2 1555 1555 1.33
LINK C THR A 15 N MSE A 16 1555 1555 1.34
LINK C MSE A 16 N LEU A 17 1555 1555 1.34
LINK C LEU A 148 N MSE A 149 1555 1555 1.33
LINK C MSE A 149 N ILE A 150 1555 1555 1.34
LINK C LEU A 183 N MSE A 184 1555 1555 1.34
LINK C MSE A 184 N LEU A 185 1555 1555 1.34
LINK C HIS B 0 N MSE B 1 1555 1555 1.33
LINK C MSE B 1 N PHE B 2 1555 1555 1.33
LINK C THR B 15 N MSE B 16 1555 1555 1.34
LINK C MSE B 16 N LEU B 17 1555 1555 1.34
LINK C LEU B 148 N MSE B 149 1555 1555 1.34
LINK C MSE B 149 N ILE B 150 1555 1555 1.34
LINK C LEU B 183 N MSE B 184 1555 1555 1.34
LINK C MSE B 184 N LEU B 185 1555 1555 1.34
LINK O ASP A 41 CA CA A 302 1555 1555 2.49
LINK OD1 ASP A 41 CA CA A 302 1555 1555 2.44
LINK OD1 ASP A 41 MG MG A 303 1555 1555 2.45
LINK OD1 ASP A 44 CA CA A 302 1555 1555 2.63
LINK OD1 ASP A 62 CA CA A 302 1555 1555 2.58
LINK OD2 ASP A 62 CA CA A 302 1555 1555 2.45
LINK O ASP A 62 MG MG A 303 1555 1555 2.44
LINK OD1 ASP A 62 MG MG A 303 1555 1555 2.28
LINK OD1 ASP A 66 MG MG A 303 1555 1555 2.27
LINK OD2 ASP A 66 MG MG A 303 1555 1555 2.76
LINK O17 SMW A 301 CA CA A 302 1555 1555 3.04
LINK O65 SMW A 301 CA CA A 302 1555 1555 2.26
LINK MG MG A 303 O HOH A 412 1555 1555 2.96
LINK O ASP B 41 CA CA B 302 1555 1555 2.55
LINK OD1 ASP B 41 CA CA B 302 1555 1555 2.34
LINK OD1 ASP B 41 MG MG B 303 1555 1555 2.58
LINK OD1 ASP B 44 CA CA B 302 1555 1555 2.60
LINK OD1 ASP B 62 CA CA B 302 1555 1555 2.42
LINK OD2 ASP B 62 CA CA B 302 1555 1555 2.42
LINK O ASP B 62 MG MG B 303 1555 1555 2.43
LINK OD1 ASP B 62 MG MG B 303 1555 1555 2.08
LINK OD1 ASP B 66 MG MG B 303 1555 1555 2.34
LINK OAT 58A B 301 CA CA B 302 1555 1555 2.40
LINK OAW 58A B 301 CA CA B 302 1555 1555 2.45
LINK MG MG B 303 O HOH B 402 1555 1555 2.86
LINK MG MG B 303 O HOH B 403 1555 1555 2.61
CRYST1 107.350 61.220 79.310 90.00 118.72 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009315 0.000000 0.005105 0.00000
SCALE2 0.000000 0.016335 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014378 0.00000
HETATM 1 N MSE A 1 -22.474 -12.457 58.500 1.00 38.66 N
ANISOU 1 N MSE A 1 4904 4633 5151 -1256 1020 -528 N
HETATM 2 CA MSE A 1 -21.313 -11.723 58.989 1.00 38.43 C
ANISOU 2 CA MSE A 1 4917 4574 5111 -1117 975 -464 C
HETATM 3 C MSE A 1 -20.391 -11.112 57.918 1.00 34.96 C
ANISOU 3 C MSE A 1 4459 4156 4667 -1045 884 -460 C
HETATM 4 O MSE A 1 -19.864 -10.019 58.124 1.00 34.68 O
ANISOU 4 O MSE A 1 4391 4158 4630 -945 823 -424 O
HETATM 5 CB MSE A 1 -20.479 -12.634 59.875 1.00 42.29 C
ANISOU 5 CB MSE A 1 5553 4931 5582 -1088 1045 -418 C
HETATM 6 CG MSE A 1 -19.372 -11.929 60.631 1.00 44.88 C
ANISOU 6 CG MSE A 1 5923 5237 5894 -955 1006 -349 C
HETATM 7 SE MSE A 1 -20.072 -10.589 61.851 1.00 78.00 SE
ANISOU 7 SE MSE A 1 10030 9521 10088 -906 991 -326 SE
HETATM 8 CE MSE A 1 -18.370 -9.986 62.609 1.00 49.17 C
ANISOU 8 CE MSE A 1 6460 5819 6403 -755 942 -245 C