HEADER HYDROLASE 10-SEP-21 7POZ TITLE CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 WITH DMSO BOUND IN THE TITLE 2 ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE 8; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_COMMON: BLOOD FLUKE; SOURCE 4 ORGANISM_TAXID: 6183; SOURCE 5 GENE: HDAC8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SMHDAC8, HISTONE-DEACETILASE, DOUBLE-CONFORMATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SACCOCCIA,G.RUBERTI REVDAT 3 31-JAN-24 7POZ 1 REMARK REVDAT 2 28-SEP-22 7POZ 1 JRNL REVDAT 1 31-AUG-22 7POZ 0 JRNL AUTH F.SACCOCCIA,L.POZZETTI,R.GIMMELLI,S.BUTINI,A.GUIDI,G.PAPOFF, JRNL AUTH 2 M.GIANNACCARI,S.BROGI,V.SCOGNAMIGLIO,S.GEMMA,G.RUBERTI, JRNL AUTH 3 G.CAMPIANI JRNL TITL CRYSTAL STRUCTURES OF SCHISTOSOMA MANSONI HISTONE JRNL TITL 2 DEACETYLASE 8 REVEAL A NOVEL BINDING SITE FOR ALLOSTERIC JRNL TITL 3 INHIBITORS. JRNL REF J.BIOL.CHEM. V. 298 02375 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35970392 JRNL DOI 10.1016/J.JBC.2022.102375 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 33072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1714 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2469 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 113 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3244 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.80000 REMARK 3 B22 (A**2) : -0.80000 REMARK 3 B33 (A**2) : 1.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.934 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3394 ; 0.005 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3131 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4618 ; 1.257 ; 1.634 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7216 ; 1.249 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 412 ; 5.917 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;33.940 ;21.910 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 541 ;13.609 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;15.378 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3823 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 811 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 702 REMARK 3 ORIGIN FOR THE GROUP (A): -8.3511 21.7802 15.1570 REMARK 3 T TENSOR REMARK 3 T11: 0.0510 T22: 0.0111 REMARK 3 T33: 0.0417 T12: -0.0112 REMARK 3 T13: 0.0432 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.1373 L22: 0.4062 REMARK 3 L33: 0.2889 L12: -0.0161 REMARK 3 L13: -0.1556 L23: 0.0102 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: 0.0008 S13: -0.0264 REMARK 3 S21: 0.0040 S22: -0.0066 S23: 0.0190 REMARK 3 S31: 0.0061 S32: 0.0338 S33: 0.0321 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7POZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292117607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34801 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 43.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.94700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4BZ5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG3350, 200MM NA/K-TARTRATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.73100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.36900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.36900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.86550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.36900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.36900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 134.59650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.36900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.36900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.86550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.36900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.36900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 134.59650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.73100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 168 REMARK 465 PRO A 169 REMARK 465 PRO A 170 REMARK 465 GLU A 171 REMARK 465 THR A 172 REMARK 465 SER A 173 REMARK 465 PRO A 174 REMARK 465 ASN A 175 REMARK 465 ARG A 176 REMARK 465 ASP A 226 REMARK 465 ASN A 227 REMARK 465 ASP A 228 REMARK 465 LYS A 229 REMARK 465 ASN A 303 REMARK 465 LEU A 304 REMARK 465 ASN A 305 REMARK 465 LEU A 306 REMARK 465 ASP A 307 REMARK 465 SER A 308 REMARK 465 ASP A 309 REMARK 465 CYS A 310 REMARK 465 ASP A 311 REMARK 465 SER A 312 REMARK 465 GLU A 313 REMARK 465 CYS A 314 REMARK 465 SER A 315 REMARK 465 HIS A 397 REMARK 465 ASN A 398 REMARK 465 LYS A 399 REMARK 465 THR A 400 REMARK 465 ASN A 436 REMARK 465 LEU A 437 REMARK 465 THR A 438 REMARK 465 GLY A 439 REMARK 465 MET A 440 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 62 -55.58 -120.39 REMARK 500 TYR A 99 -108.95 52.33 REMARK 500 ASN A 235 26.68 -152.93 REMARK 500 HIS A 394 -164.88 -125.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 502 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 184 O REMARK 620 2 ASP A 184 OD1 74.9 REMARK 620 3 ASP A 186 O 108.7 108.8 REMARK 620 4 HIS A 188 O 163.3 88.6 78.9 REMARK 620 5 SER A 207 OG 86.1 99.0 151.0 94.0 REMARK 620 6 VAL A 208 O 75.0 147.7 70.5 121.7 90.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 186 OD1 REMARK 620 2 HIS A 188 ND1 104.9 REMARK 620 3 ASP A 285 OD2 111.4 100.9 REMARK 620 4 DMS A 505 S 117.8 98.7 119.2 REMARK 620 5 DMS A 505 O 133.1 112.1 88.9 30.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 503 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 197 O REMARK 620 2 SER A 200 O 78.2 REMARK 620 3 VAL A 203 O 114.6 81.6 REMARK 620 4 SER A 243 OG 113.2 72.7 118.5 REMARK 620 5 HOH A 694 O 79.8 157.6 111.4 113.1 REMARK 620 N 1 2 3 4 DBREF 7POZ A 1 440 UNP A5H660 A5H660_SCHMA 1 440 SEQADV 7POZ LYS A 395 UNP A5H660 GLU 395 CONFLICT SEQRES 1 A 440 MET SER VAL GLY ILE VAL TYR GLY ASP GLN TYR ARG GLN SEQRES 2 A 440 LEU CYS CYS SER SER PRO LYS PHE GLY ASP ARG TYR ALA SEQRES 3 A 440 LEU VAL MET ASP LEU ILE ASN ALA TYR LYS LEU ILE PRO SEQRES 4 A 440 GLU LEU SER ARG VAL PRO PRO LEU GLN TRP ASP SER PRO SEQRES 5 A 440 SER ARG MET TYR GLU ALA VAL THR ALA PHE HIS SER THR SEQRES 6 A 440 GLU TYR VAL ASP ALA LEU LYS LYS LEU GLN MET LEU HIS SEQRES 7 A 440 CYS GLU GLU LYS GLU LEU THR ALA ASP ASP GLU LEU LEU SEQRES 8 A 440 MET ASP SER PHE SER LEU ASN TYR ASP CYS PRO GLY PHE SEQRES 9 A 440 PRO SER VAL PHE ASP TYR SER LEU ALA ALA VAL GLN GLY SEQRES 10 A 440 SER LEU ALA ALA ALA SER ALA LEU ILE CYS ARG HIS CYS SEQRES 11 A 440 GLU VAL VAL ILE ASN TRP GLY GLY GLY TRP HIS HIS ALA SEQRES 12 A 440 LYS ARG SER GLU ALA SER GLY PHE CYS TYR LEU ASN ASP SEQRES 13 A 440 ILE VAL LEU ALA ILE HIS ARG LEU VAL SER SER THR PRO SEQRES 14 A 440 PRO GLU THR SER PRO ASN ARG GLN THR ARG VAL LEU TYR SEQRES 15 A 440 VAL ASP LEU ASP LEU HIS HIS GLY ASP GLY VAL GLU GLU SEQRES 16 A 440 ALA PHE TRP TYR SER PRO ARG VAL VAL THR PHE SER VAL SEQRES 17 A 440 HIS HIS ALA SER PRO GLY PHE PHE PRO GLY THR GLY THR SEQRES 18 A 440 TRP ASN MET VAL ASP ASN ASP LYS LEU PRO ILE PHE LEU SEQRES 19 A 440 ASN GLY ALA GLY ARG GLY ARG PHE SER ALA PHE ASN LEU SEQRES 20 A 440 PRO LEU GLU GLU GLY ILE ASN ASP LEU ASP TRP SER ASN SEQRES 21 A 440 ALA ILE GLY PRO ILE LEU ASP SER LEU ASN ILE VAL ILE SEQRES 22 A 440 GLN PRO SER TYR VAL VAL VAL GLN CYS GLY ALA ASP CYS SEQRES 23 A 440 LEU ALA THR ASP PRO HIS ARG ILE PHE ARG LEU THR ASN SEQRES 24 A 440 PHE TYR PRO ASN LEU ASN LEU ASP SER ASP CYS ASP SER SEQRES 25 A 440 GLU CYS SER LEU SER GLY TYR LEU TYR ALA ILE LYS LYS SEQRES 26 A 440 ILE LEU SER TRP LYS VAL PRO THR LEU ILE LEU GLY GLY SEQRES 27 A 440 GLY GLY TYR ASN PHE PRO ASP THR ALA ARG LEU TRP THR SEQRES 28 A 440 ARG VAL THR ALA LEU THR ILE GLU GLU VAL LYS GLY LYS SEQRES 29 A 440 LYS MET THR ILE SER PRO GLU ILE PRO GLU HIS SER TYR SEQRES 30 A 440 PHE SER ARG TYR GLY PRO ASP PHE GLU LEU ASP ILE ASP SEQRES 31 A 440 TYR PHE PRO HIS LYS SER HIS ASN LYS THR LEU ASP SER SEQRES 32 A 440 ILE GLN LYS HIS HIS ARG ARG ILE LEU GLU GLN LEU ARG SEQRES 33 A 440 ASN TYR ALA ASP LEU ASN LYS LEU ILE TYR ASP TYR ASP SEQRES 34 A 440 GLN VAL TYR GLN LEU TYR ASN LEU THR GLY MET HET ZN A 501 1 HET K A 502 1 HET K A 503 1 HET GOL A 504 6 HET DMS A 505 4 HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 K 2(K 1+) FORMUL 5 GOL C3 H8 O3 FORMUL 6 DMS C2 H6 O S FORMUL 7 HOH *185(H2 O) HELIX 1 AA1 GLY A 8 CYS A 16 1 9 HELIX 2 AA2 ASP A 23 TYR A 35 1 13 HELIX 3 AA3 LEU A 37 PRO A 39 5 3 HELIX 4 AA4 SER A 51 THR A 60 1 10 HELIX 5 AA5 SER A 64 GLU A 80 1 17 HELIX 6 AA6 THR A 85 PHE A 95 1 11 HELIX 7 AA7 SER A 106 CYS A 127 1 22 HELIX 8 AA8 ASN A 155 SER A 167 1 13 HELIX 9 AA9 GLY A 190 PHE A 197 1 8 HELIX 10 AB1 ALA A 237 ARG A 241 5 5 HELIX 11 AB2 ASN A 254 GLN A 274 1 21 HELIX 12 AB3 SER A 317 TRP A 329 1 13 HELIX 13 AB4 ASN A 342 GLY A 363 1 22 HELIX 14 AB5 TYR A 377 GLY A 382 5 6 HELIX 15 AB6 ASP A 402 ASN A 422 1 21 HELIX 16 AB7 ASP A 427 TYR A 435 1 9 SHEET 1 AA1 8 LEU A 41 VAL A 44 0 SHEET 2 AA1 8 VAL A 3 VAL A 6 1 N ILE A 5 O VAL A 44 SHEET 3 AA1 8 VAL A 132 ASN A 135 1 O VAL A 132 N GLY A 4 SHEET 4 AA1 8 THR A 333 LEU A 336 1 O ILE A 335 N ASN A 135 SHEET 5 AA1 8 TYR A 277 GLN A 281 1 N VAL A 280 O LEU A 334 SHEET 6 AA1 8 VAL A 180 ASP A 184 1 N VAL A 183 O VAL A 279 SHEET 7 AA1 8 VAL A 203 HIS A 210 1 O VAL A 204 N TYR A 182 SHEET 8 AA1 8 ALA A 244 LEU A 249 1 O PHE A 245 N THR A 205 LINK O ASP A 184 K K A 502 1555 1555 2.81 LINK OD1 ASP A 184 K K A 502 1555 1555 2.71 LINK OD1 ASP A 186 ZN ZN A 501 1555 1555 1.95 LINK O ASP A 186 K K A 502 1555 1555 2.64 LINK ND1 HIS A 188 ZN ZN A 501 1555 1555 2.10 LINK O HIS A 188 K K A 502 1555 1555 2.77 LINK O PHE A 197 K K A 503 1555 1555 2.55 LINK O SER A 200 K K A 503 1555 1555 2.86 LINK O VAL A 203 K K A 503 1555 1555 2.52 LINK OG SER A 207 K K A 502 1555 1555 2.87 LINK O VAL A 208 K K A 502 1555 1555 2.67 LINK OG SER A 243 K K A 503 1555 1555 2.62 LINK OD2 ASP A 285 ZN ZN A 501 1555 1555 1.98 LINK ZN ZN A 501 S DMS A 505 1555 1555 2.78 LINK ZN ZN A 501 O DMS A 505 1555 1555 1.92 LINK K K A 503 O HOH A 694 1555 1555 2.86 CISPEP 1 PHE A 216 PRO A 217 0 -8.85 CISPEP 2 GLY A 382 PRO A 383 0 -0.99 CRYST1 70.738 70.738 179.462 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014137 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005572 0.00000