HEADER TRANSFERASE 20-SEP-21 7PQS TITLE SRPK1 IN COMPLEX WITH MSC2711186 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SRSF PROTEIN KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.11.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, INHIBITOR, COMPLEX, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHROEDER,M.LEIENDECKER,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (SGC) REVDAT 2 31-JAN-24 7PQS 1 REMARK REVDAT 1 15-DEC-21 7PQS 0 JRNL AUTH M.SCHROEDER,M.LEIENDECKER,S.KNAPP JRNL TITL SRPK1 IN COMPLEX WITH MSC2711186 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2482 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3533 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 177 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5537 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.47000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -1.52000 REMARK 3 B12 (A**2) : 0.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.223 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.745 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5780 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5388 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7863 ; 1.620 ; 1.629 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12362 ; 1.326 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 698 ; 6.899 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 275 ;34.395 ;22.655 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 934 ;13.685 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;24.139 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 747 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6708 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1308 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 66 438 B 66 438 11507 0.040 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 66 A 801 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8562 17.8215 19.5352 REMARK 3 T TENSOR REMARK 3 T11: 0.0445 T22: 0.0957 REMARK 3 T33: 0.0310 T12: -0.0578 REMARK 3 T13: -0.0068 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.7627 L22: 1.8514 REMARK 3 L33: 2.1306 L12: -0.3412 REMARK 3 L13: 0.4152 L23: -0.8652 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0046 S13: 0.0543 REMARK 3 S21: 0.0333 S22: -0.1331 S23: -0.0429 REMARK 3 S31: 0.0379 S32: 0.1171 S33: 0.1400 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 66 B 1101 REMARK 3 ORIGIN FOR THE GROUP (A): 30.9987 40.7467 32.1853 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.0103 REMARK 3 T33: 0.0254 T12: -0.0078 REMARK 3 T13: 0.0092 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.8699 L22: 0.7565 REMARK 3 L33: 2.1489 L12: 0.3273 REMARK 3 L13: -1.0100 L23: -0.0895 REMARK 3 S TENSOR REMARK 3 S11: -0.1344 S12: -0.0435 S13: -0.0560 REMARK 3 S21: -0.0594 S22: -0.0278 S23: 0.0098 REMARK 3 S31: 0.0768 S32: 0.1093 S33: 0.1622 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7PQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292118208. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50020 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.50 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.50 REMARK 200 R MERGE FOR SHELL (I) : 1.67600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5MXX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG SMEAR BROAD, 0.1M CACODYLATE, REMARK 280 5% TACSIMATE, 10% ETHYLENE GLYCOL, PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 206.47267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.23633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 154.85450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.61817 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 258.09083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 56 REMARK 465 MET A 57 REMARK 465 ASP A 58 REMARK 465 PRO A 59 REMARK 465 ASN A 60 REMARK 465 ASP A 61 REMARK 465 TYR A 62 REMARK 465 CYS A 63 REMARK 465 LYS A 64 REMARK 465 GLY A 65 REMARK 465 HIS A 90 REMARK 465 GLN A 239 REMARK 465 ARG A 240 REMARK 465 SER A 241 REMARK 465 GLY A 242 REMARK 465 ALA A 243 REMARK 465 PRO A 244 REMARK 465 PRO A 245 REMARK 465 PRO A 246 REMARK 465 SER A 247 REMARK 465 GLY A 248 REMARK 465 SER A 249 REMARK 465 ALA A 250 REMARK 465 VAL A 251 REMARK 465 SER A 252 REMARK 465 THR A 253 REMARK 465 ALA A 254 REMARK 465 PRO A 255 REMARK 465 ALA A 256 REMARK 465 THR A 257 REMARK 465 ALA A 258 REMARK 465 GLY A 259 REMARK 465 SER B 56 REMARK 465 MET B 57 REMARK 465 ASP B 58 REMARK 465 PRO B 59 REMARK 465 ASN B 60 REMARK 465 ASP B 61 REMARK 465 TYR B 62 REMARK 465 CYS B 63 REMARK 465 LYS B 64 REMARK 465 GLY B 65 REMARK 465 HIS B 90 REMARK 465 GLN B 239 REMARK 465 ARG B 240 REMARK 465 SER B 241 REMARK 465 GLY B 242 REMARK 465 ALA B 243 REMARK 465 PRO B 244 REMARK 465 PRO B 245 REMARK 465 PRO B 246 REMARK 465 SER B 247 REMARK 465 GLY B 248 REMARK 465 SER B 249 REMARK 465 ALA B 250 REMARK 465 VAL B 251 REMARK 465 SER B 252 REMARK 465 THR B 253 REMARK 465 ALA B 254 REMARK 465 PRO B 255 REMARK 465 ALA B 256 REMARK 465 THR B 257 REMARK 465 ALA B 258 REMARK 465 GLY B 259 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 VAL A 156 CG1 CG2 REMARK 470 ASN A 157 CG OD1 ND2 REMARK 470 GLU A 225 CG CD OE1 OE2 REMARK 470 ARG A 230 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 234 CG CD OE1 OE2 REMARK 470 TRP A 238 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 238 CZ3 CH2 REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 LYS A 289 CG CD CE NZ REMARK 470 GLU A 341 CG CD OE1 OE2 REMARK 470 LYS A 358 CG CD CE NZ REMARK 470 LYS A 362 CG CD CE NZ REMARK 470 LYS A 371 CG CD CE NZ REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 LYS A 377 CG CD CE NZ REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 LYS A 387 CG CD CE NZ REMARK 470 GLU A 397 CG CD OE1 OE2 REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 GLU B 115 CG CD OE1 OE2 REMARK 470 LYS B 152 CG CD CE NZ REMARK 470 VAL B 156 CG1 CG2 REMARK 470 ASN B 157 CG OD1 ND2 REMARK 470 GLU B 225 CG CD OE1 OE2 REMARK 470 ARG B 230 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 TRP B 238 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 238 CZ3 CH2 REMARK 470 ASN B 260 CG OD1 ND2 REMARK 470 LYS B 269 CG CD CE NZ REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 LYS B 358 CG CD CE NZ REMARK 470 LYS B 362 CG CD CE NZ REMARK 470 LYS B 371 CG CD CE NZ REMARK 470 LYS B 376 CG CD CE NZ REMARK 470 LYS B 377 CG CD CE NZ REMARK 470 LYS B 385 CG CD CE NZ REMARK 470 LYS B 387 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 418 O HOH A 701 2.18 REMARK 500 OE1 GLU A 335 O HOH A 702 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 79 -36.97 -159.19 REMARK 500 ASP A 135 85.79 -154.27 REMARK 500 THR A 212 -0.34 70.22 REMARK 500 ASP A 213 45.51 -149.06 REMARK 500 ASP A 280 81.95 48.65 REMARK 500 GLN A 296 142.25 78.77 REMARK 500 ARG B 79 -36.57 -159.64 REMARK 500 ASP B 135 85.75 -154.30 REMARK 500 ASP B 213 45.07 -150.53 REMARK 500 PHE B 261 -3.99 75.41 REMARK 500 ASP B 280 80.86 47.47 REMARK 500 GLN B 296 141.76 80.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 437 SER B 438 141.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 7PQS A 56 438 PDB 7PQS 7PQS 56 438 DBREF 7PQS B 56 438 PDB 7PQS 7PQS 56 438 SEQRES 1 A 383 SER MET ASP PRO ASN ASP TYR CYS LYS GLY GLY TYR HIS SEQRES 2 A 383 LEU VAL LYS ILE GLY ASP LEU PHE ASN GLY ARG TYR HIS SEQRES 3 A 383 VAL ILE ARG LYS LEU GLY TRP GLY HIS PHE SER THR VAL SEQRES 4 A 383 TRP LEU SER TRP ASP ILE GLN GLY LYS LYS PHE VAL ALA SEQRES 5 A 383 MET LYS VAL VAL LYS SER ALA GLU HIS TYR THR GLU THR SEQRES 6 A 383 ALA LEU ASP GLU ILE ARG LEU LEU LYS SER VAL ARG ASN SEQRES 7 A 383 SER ASP PRO ASN ASP PRO ASN ARG GLU MET VAL VAL GLN SEQRES 8 A 383 LEU LEU ASP ASP PHE LYS ILE SER GLY VAL ASN GLY THR SEQRES 9 A 383 HIS ILE CYS MET VAL PHE GLU VAL LEU GLY HIS HIS LEU SEQRES 10 A 383 LEU LYS TRP ILE ILE LYS SER ASN TYR GLN GLY LEU PRO SEQRES 11 A 383 LEU PRO CYS VAL LYS LYS ILE ILE GLN GLN VAL LEU GLN SEQRES 12 A 383 GLY LEU ASP TYR LEU HIS THR LYS CYS ARG ILE ILE HIS SEQRES 13 A 383 THR ASP ILE LYS PRO GLU ASN ILE LEU LEU SER VAL ASN SEQRES 14 A 383 GLU GLN TYR ILE ARG ARG LEU ALA ALA GLU ALA THR GLU SEQRES 15 A 383 TRP GLN ARG SER GLY ALA PRO PRO PRO SER GLY SER ALA SEQRES 16 A 383 VAL SER THR ALA PRO ALA THR ALA GLY ASN PHE LEU VAL SEQRES 17 A 383 ASN PRO LEU GLU PRO LYS ASN ALA GLU LYS LEU LYS VAL SEQRES 18 A 383 LYS ILE ALA ASP LEU GLY ASN ALA CYS TRP VAL HIS LYS SEQRES 19 A 383 HIS PHE THR GLU ASP ILE GLN THR ARG GLN TYR ARG SER SEQRES 20 A 383 LEU GLU VAL LEU ILE GLY SER GLY TYR ASN THR PRO ALA SEQRES 21 A 383 ASP ILE TRP SER THR ALA CYS MET ALA PHE GLU LEU ALA SEQRES 22 A 383 THR GLY ASP TYR LEU PHE GLU PRO HIS SER GLY GLU GLU SEQRES 23 A 383 TYR THR ARG ASP GLU ASP HIS ILE ALA LEU ILE ILE GLU SEQRES 24 A 383 LEU LEU GLY LYS VAL PRO ARG LYS LEU ILE VAL ALA GLY SEQRES 25 A 383 LYS TYR SER LYS GLU PHE PHE THR LYS LYS GLY ASP LEU SEQRES 26 A 383 LYS HIS ILE THR LYS LEU LYS PRO TRP GLY LEU PHE GLU SEQRES 27 A 383 VAL LEU VAL GLU LYS TYR GLU TRP SER GLN GLU GLU ALA SEQRES 28 A 383 ALA GLY PHE THR ASP PHE LEU LEU PRO MET LEU GLU LEU SEQRES 29 A 383 ILE PRO GLU LYS ARG ALA THR ALA ALA GLU CYS LEU ARG SEQRES 30 A 383 HIS PRO TRP LEU ASN SER SEQRES 1 B 383 SER MET ASP PRO ASN ASP TYR CYS LYS GLY GLY TYR HIS SEQRES 2 B 383 LEU VAL LYS ILE GLY ASP LEU PHE ASN GLY ARG TYR HIS SEQRES 3 B 383 VAL ILE ARG LYS LEU GLY TRP GLY HIS PHE SER THR VAL SEQRES 4 B 383 TRP LEU SER TRP ASP ILE GLN GLY LYS LYS PHE VAL ALA SEQRES 5 B 383 MET LYS VAL VAL LYS SER ALA GLU HIS TYR THR GLU THR SEQRES 6 B 383 ALA LEU ASP GLU ILE ARG LEU LEU LYS SER VAL ARG ASN SEQRES 7 B 383 SER ASP PRO ASN ASP PRO ASN ARG GLU MET VAL VAL GLN SEQRES 8 B 383 LEU LEU ASP ASP PHE LYS ILE SER GLY VAL ASN GLY THR SEQRES 9 B 383 HIS ILE CYS MET VAL PHE GLU VAL LEU GLY HIS HIS LEU SEQRES 10 B 383 LEU LYS TRP ILE ILE LYS SER ASN TYR GLN GLY LEU PRO SEQRES 11 B 383 LEU PRO CYS VAL LYS LYS ILE ILE GLN GLN VAL LEU GLN SEQRES 12 B 383 GLY LEU ASP TYR LEU HIS THR LYS CYS ARG ILE ILE HIS SEQRES 13 B 383 THR ASP ILE LYS PRO GLU ASN ILE LEU LEU SER VAL ASN SEQRES 14 B 383 GLU GLN TYR ILE ARG ARG LEU ALA ALA GLU ALA THR GLU SEQRES 15 B 383 TRP GLN ARG SER GLY ALA PRO PRO PRO SER GLY SER ALA SEQRES 16 B 383 VAL SER THR ALA PRO ALA THR ALA GLY ASN PHE LEU VAL SEQRES 17 B 383 ASN PRO LEU GLU PRO LYS ASN ALA GLU LYS LEU LYS VAL SEQRES 18 B 383 LYS ILE ALA ASP LEU GLY ASN ALA CYS TRP VAL HIS LYS SEQRES 19 B 383 HIS PHE THR GLU ASP ILE GLN THR ARG GLN TYR ARG SER SEQRES 20 B 383 LEU GLU VAL LEU ILE GLY SER GLY TYR ASN THR PRO ALA SEQRES 21 B 383 ASP ILE TRP SER THR ALA CYS MET ALA PHE GLU LEU ALA SEQRES 22 B 383 THR GLY ASP TYR LEU PHE GLU PRO HIS SER GLY GLU GLU SEQRES 23 B 383 TYR THR ARG ASP GLU ASP HIS ILE ALA LEU ILE ILE GLU SEQRES 24 B 383 LEU LEU GLY LYS VAL PRO ARG LYS LEU ILE VAL ALA GLY SEQRES 25 B 383 LYS TYR SER LYS GLU PHE PHE THR LYS LYS GLY ASP LEU SEQRES 26 B 383 LYS HIS ILE THR LYS LEU LYS PRO TRP GLY LEU PHE GLU SEQRES 27 B 383 VAL LEU VAL GLU LYS TYR GLU TRP SER GLN GLU GLU ALA SEQRES 28 B 383 ALA GLY PHE THR ASP PHE LEU LEU PRO MET LEU GLU LEU SEQRES 29 B 383 ILE PRO GLU LYS ARG ALA THR ALA ALA GLU CYS LEU ARG SEQRES 30 B 383 HIS PRO TRP LEU ASN SER HET 80H A 601 31 HET GOL A 602 6 HET CL A 603 1 HET CIT B 501 13 HET EDO B 502 4 HET 80H B 503 31 HET GOL B 504 6 HET GOL B 505 6 HET CL B 506 1 HET NA B 507 1 HETNAM 80H ~{N}-[3-[[[2-(6-CHLORANYL-7-FLUORANYL-1~{H}- HETNAM 2 80H BENZIMIDAZOL-2-YL)PYRIMIDIN-4-YL]AMINO]METHYL]PYRIDIN- HETNAM 3 80H 2-YL]-~{N}-METHYL-METHANESULFONAMIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM CIT CITRIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 80H 2(C19 H17 CL F N7 O2 S) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 5 CL 2(CL 1-) FORMUL 6 CIT C6 H8 O7 FORMUL 7 EDO C2 H6 O2 FORMUL 12 NA NA 1+ FORMUL 13 HOH *304(H2 O) HELIX 1 AA1 ALA A 114 SER A 134 1 21 HELIX 2 AA2 ASP A 138 VAL A 144 5 7 HELIX 3 AA3 LEU A 172 SER A 179 1 8 HELIX 4 AA4 PRO A 185 LYS A 206 1 22 HELIX 5 AA5 LYS A 215 GLU A 217 5 3 HELIX 6 AA6 ASN A 224 TRP A 238 1 15 HELIX 7 AA7 GLU A 267 LEU A 274 5 8 HELIX 8 AA8 ASP A 280 ALA A 284 5 5 HELIX 9 AA9 THR A 297 ARG A 301 5 5 HELIX 10 AB1 SER A 302 GLY A 308 1 7 HELIX 11 AB2 THR A 313 GLY A 330 1 18 HELIX 12 AB3 THR A 343 GLY A 357 1 15 HELIX 13 AB4 PRO A 360 GLY A 367 1 8 HELIX 14 AB5 TYR A 369 PHE A 374 1 6 HELIX 15 AB6 GLY A 390 LYS A 398 1 9 HELIX 16 AB7 SER A 402 LEU A 414 1 13 HELIX 17 AB8 PRO A 415 GLU A 418 5 4 HELIX 18 AB9 ILE A 420 ARG A 424 5 5 HELIX 19 AC1 THR A 426 LEU A 431 1 6 HELIX 20 AC2 ARG A 432 SER A 438 5 7 HELIX 21 AC3 ALA B 114 SER B 134 1 21 HELIX 22 AC4 ASP B 138 VAL B 144 5 7 HELIX 23 AC5 LEU B 172 SER B 179 1 8 HELIX 24 AC6 PRO B 185 LYS B 206 1 22 HELIX 25 AC7 LYS B 215 GLU B 217 5 3 HELIX 26 AC8 ASN B 224 GLU B 237 1 14 HELIX 27 AC9 GLU B 267 LEU B 274 5 8 HELIX 28 AD1 ASP B 280 ALA B 284 5 5 HELIX 29 AD2 THR B 297 ARG B 301 5 5 HELIX 30 AD3 SER B 302 GLY B 308 1 7 HELIX 31 AD4 THR B 313 GLY B 330 1 18 HELIX 32 AD5 THR B 343 GLY B 357 1 15 HELIX 33 AD6 PRO B 360 GLY B 367 1 8 HELIX 34 AD7 TYR B 369 PHE B 374 1 6 HELIX 35 AD8 GLY B 390 LYS B 398 1 9 HELIX 36 AD9 SER B 402 LEU B 414 1 13 HELIX 37 AE1 PRO B 415 GLU B 418 5 4 HELIX 38 AE2 ILE B 420 ARG B 424 5 5 HELIX 39 AE3 THR B 426 LEU B 431 1 6 HELIX 40 AE4 ARG B 432 SER B 438 5 7 SHEET 1 AA1 6 LEU A 75 PHE A 76 0 SHEET 2 AA1 6 TYR A 80 TRP A 88 -1 O TYR A 80 N PHE A 76 SHEET 3 AA1 6 SER A 92 ASP A 99 -1 O VAL A 94 N LEU A 86 SHEET 4 AA1 6 LYS A 104 VAL A 111 -1 O LYS A 104 N ASP A 99 SHEET 5 AA1 6 GLY A 158 PHE A 165 -1 O MET A 163 N LYS A 109 SHEET 6 AA1 6 LEU A 147 GLY A 155 -1 N LEU A 148 O VAL A 164 SHEET 1 AA2 3 HIS A 170 HIS A 171 0 SHEET 2 AA2 3 ILE A 219 LEU A 221 -1 O LEU A 221 N HIS A 170 SHEET 3 AA2 3 VAL A 276 ILE A 278 -1 O LYS A 277 N LEU A 220 SHEET 1 AA3 2 ILE A 209 ILE A 210 0 SHEET 2 AA3 2 CYS A 285 TRP A 286 -1 O CYS A 285 N ILE A 210 SHEET 1 AA4 6 LEU B 75 PHE B 76 0 SHEET 2 AA4 6 TYR B 80 TRP B 88 -1 O TYR B 80 N PHE B 76 SHEET 3 AA4 6 SER B 92 ASP B 99 -1 O VAL B 94 N LEU B 86 SHEET 4 AA4 6 LYS B 104 VAL B 111 -1 O MET B 108 N TRP B 95 SHEET 5 AA4 6 GLY B 158 PHE B 165 -1 O MET B 163 N LYS B 109 SHEET 6 AA4 6 ASP B 149 GLY B 155 -1 N PHE B 151 O CYS B 162 SHEET 1 AA5 3 HIS B 170 HIS B 171 0 SHEET 2 AA5 3 ILE B 219 LEU B 221 -1 O LEU B 221 N HIS B 170 SHEET 3 AA5 3 VAL B 276 ILE B 278 -1 O LYS B 277 N LEU B 220 SHEET 1 AA6 2 ILE B 209 ILE B 210 0 SHEET 2 AA6 2 CYS B 285 TRP B 286 -1 O CYS B 285 N ILE B 210 CRYST1 75.132 75.132 309.709 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013310 0.007684 0.000000 0.00000 SCALE2 0.000000 0.015369 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003229 0.00000