HEADER VIRAL PROTEIN 22-SEP-21 7PS3 TITLE CRYSTAL STRUCTURE OF ANTIBODY BETA-32 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-32 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-32 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2 B.1.1.7 (ALPHA) VARIANT, B.1.351 (BETA) VARIANT, P.1 KEYWDS 2 (GAMMA) VARIANT, B.1.617.2 (DELTA) VARIANT, ANTIBODY, RECEPTOR- KEYWDS 3 BINDING-DOMAIN, SPIKE, NEUTRALISATION, VIRAL PROTEIN/IMMUNE SYSTEM, KEYWDS 4 VIRAL PROTEIN, IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,J.REN,D.I.STUART REVDAT 4 31-JAN-24 7PS3 1 REMARK REVDAT 3 26-JAN-22 7PS3 1 JRNL REVDAT 2 29-DEC-21 7PS3 1 JRNL REVDAT 1 15-DEC-21 7PS3 0 JRNL AUTH C.LIU,D.ZHOU,R.NUTALAI,H.M.E.DUYVESTEYN,A.TUEKPRAKHON, JRNL AUTH 2 H.M.GINN,W.DEJNIRATTISAI,P.SUPASA,A.J.MENTZER,B.WANG, JRNL AUTH 3 J.B.CASE,Y.ZHAO,D.T.SKELLY,R.E.CHEN,S.A.JOHNSON,T.G.RITTER, JRNL AUTH 4 C.MASON,T.MALIK,N.TEMPERTON,N.G.PATERSON,M.A.WILLIAMS, JRNL AUTH 5 D.R.HALL,D.K.CLARE,A.HOWE,P.J.R.GOULDER,E.E.FRY,M.S.DIAMOND, JRNL AUTH 6 J.MONGKOLSAPAYA,J.REN,D.I.STUART,G.R.SCREATON JRNL TITL THE ANTIBODY RESPONSE TO SARS-COV-2 BETA UNDERSCORES THE JRNL TITL 2 ANTIGENIC DISTANCE TO OTHER VARIANTS. JRNL REF CELL HOST MICROBE V. 30 53 2022 JRNL REFN ESSN 1934-6069 JRNL PMID 34921776 JRNL DOI 10.1016/J.CHOM.2021.11.013 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 60394 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 3002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5000 - 4.6900 1.00 3002 132 0.1583 0.1726 REMARK 3 2 4.6900 - 3.7200 1.00 2841 149 0.1269 0.1453 REMARK 3 3 3.7200 - 3.2500 1.00 2823 144 0.1465 0.1728 REMARK 3 4 3.2500 - 2.9600 1.00 2792 143 0.1647 0.1737 REMARK 3 5 2.9600 - 2.7400 1.00 2758 156 0.1730 0.1811 REMARK 3 6 2.7400 - 2.5800 1.00 2754 158 0.1808 0.1970 REMARK 3 7 2.5800 - 2.4500 1.00 2751 159 0.1784 0.2108 REMARK 3 8 2.4500 - 2.3500 1.00 2754 138 0.1750 0.1867 REMARK 3 9 2.3500 - 2.2600 1.00 2746 151 0.1689 0.2132 REMARK 3 10 2.2600 - 2.1800 1.00 2755 153 0.1701 0.1976 REMARK 3 11 2.1800 - 2.1100 1.00 2720 147 0.1770 0.2189 REMARK 3 12 2.1100 - 2.0500 1.00 2745 150 0.1894 0.2221 REMARK 3 13 2.0500 - 2.0000 1.00 2741 145 0.1856 0.1988 REMARK 3 14 2.0000 - 1.9500 1.00 2745 137 0.1799 0.1948 REMARK 3 15 1.9500 - 1.9000 1.00 2691 150 0.1738 0.2127 REMARK 3 16 1.9000 - 1.8600 1.00 2727 157 0.1861 0.2237 REMARK 3 17 1.8600 - 1.8200 1.00 2735 148 0.2187 0.2749 REMARK 3 18 1.8200 - 1.7900 1.00 2711 132 0.2839 0.3072 REMARK 3 19 1.7900 - 1.7600 0.99 2710 132 0.3377 0.3849 REMARK 3 20 1.7600 - 1.7300 0.95 2592 108 0.4048 0.4533 REMARK 3 21 1.7300 - 1.7000 0.84 2299 113 0.4479 0.4272 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.249 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.404 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3507 REMARK 3 ANGLE : 0.831 4782 REMARK 3 CHIRALITY : 0.057 528 REMARK 3 PLANARITY : 0.007 612 REMARK 3 DIHEDRAL : 13.217 1260 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4501 -7.0324 -20.0599 REMARK 3 T TENSOR REMARK 3 T11: 0.2949 T22: 0.2012 REMARK 3 T33: 0.2956 T12: 0.0370 REMARK 3 T13: -0.0431 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 2.3257 L22: 2.0781 REMARK 3 L33: 2.9976 L12: 0.2308 REMARK 3 L13: 1.3909 L23: 1.0295 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: -0.0298 S13: -0.1384 REMARK 3 S21: 0.1939 S22: 0.0651 S23: -0.2565 REMARK 3 S31: 0.2208 S32: 0.1905 S33: -0.0733 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 92 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6081 -0.2039 -21.4142 REMARK 3 T TENSOR REMARK 3 T11: 0.2631 T22: 0.1803 REMARK 3 T33: 0.2687 T12: 0.0073 REMARK 3 T13: -0.0131 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.2534 L22: 1.8601 REMARK 3 L33: 1.3159 L12: -0.1539 REMARK 3 L13: -0.9713 L23: 1.1430 REMARK 3 S TENSOR REMARK 3 S11: -0.1163 S12: -0.0135 S13: -0.0002 REMARK 3 S21: -0.1008 S22: 0.0732 S23: -0.0105 REMARK 3 S31: -0.1909 S32: 0.0283 S33: 0.0213 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 132 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9936 18.6708 10.7515 REMARK 3 T TENSOR REMARK 3 T11: 0.3806 T22: 0.5899 REMARK 3 T33: 0.4416 T12: 0.0242 REMARK 3 T13: 0.0502 T23: -0.1575 REMARK 3 L TENSOR REMARK 3 L11: 1.5720 L22: 0.5037 REMARK 3 L33: 5.9228 L12: 0.0018 REMARK 3 L13: 1.8633 L23: -1.3658 REMARK 3 S TENSOR REMARK 3 S11: -0.4116 S12: -1.1669 S13: 1.0089 REMARK 3 S21: 0.4876 S22: 0.6709 S23: -0.5929 REMARK 3 S31: -0.6584 S32: -0.2808 S33: -0.1889 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 147 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7802 10.6637 2.2436 REMARK 3 T TENSOR REMARK 3 T11: 0.2429 T22: 0.3337 REMARK 3 T33: 0.2728 T12: 0.0013 REMARK 3 T13: -0.0179 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 3.2115 L22: 1.7123 REMARK 3 L33: 1.3595 L12: -2.0228 REMARK 3 L13: -0.8474 L23: 0.4871 REMARK 3 S TENSOR REMARK 3 S11: -0.0633 S12: -0.1503 S13: -0.1598 REMARK 3 S21: 0.1799 S22: 0.0395 S23: 0.1162 REMARK 3 S31: 0.1461 S32: 0.0468 S33: -0.0162 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 216 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6372 6.3549 9.4708 REMARK 3 T TENSOR REMARK 3 T11: 0.5159 T22: 0.5069 REMARK 3 T33: 0.4667 T12: -0.0489 REMARK 3 T13: 0.1054 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.8005 L22: 3.2665 REMARK 3 L33: 6.2708 L12: -2.8541 REMARK 3 L13: -3.6870 L23: 3.9070 REMARK 3 S TENSOR REMARK 3 S11: -0.0796 S12: -0.8330 S13: -0.3639 REMARK 3 S21: 0.7228 S22: 0.1466 S23: 0.0060 REMARK 3 S31: 0.1710 S32: -0.2042 S33: 0.0332 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6655 19.9462 -28.9110 REMARK 3 T TENSOR REMARK 3 T11: 0.3019 T22: 0.3035 REMARK 3 T33: 0.3813 T12: -0.0518 REMARK 3 T13: -0.0056 T23: 0.0849 REMARK 3 L TENSOR REMARK 3 L11: 2.4382 L22: 3.8780 REMARK 3 L33: 2.0112 L12: -0.9765 REMARK 3 L13: 0.5917 L23: 0.6487 REMARK 3 S TENSOR REMARK 3 S11: -0.0373 S12: -0.0195 S13: 0.2719 REMARK 3 S21: -0.1880 S22: 0.0348 S23: -0.6189 REMARK 3 S31: -0.2620 S32: 0.5081 S33: 0.0842 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2821 12.8228 -31.6851 REMARK 3 T TENSOR REMARK 3 T11: 0.2921 T22: 0.2351 REMARK 3 T33: 0.2437 T12: 0.0019 REMARK 3 T13: 0.0130 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 2.5100 L22: 3.1229 REMARK 3 L33: 2.0727 L12: -0.7065 REMARK 3 L13: 1.1138 L23: -0.0311 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: 0.3383 S13: 0.1725 REMARK 3 S21: -0.2373 S22: -0.0684 S23: -0.0652 REMARK 3 S31: 0.0664 S32: 0.1130 S33: 0.0727 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3953 12.3102 -27.0048 REMARK 3 T TENSOR REMARK 3 T11: 0.2557 T22: 0.2326 REMARK 3 T33: 0.2404 T12: -0.0185 REMARK 3 T13: 0.0036 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.8756 L22: 3.7602 REMARK 3 L33: 2.2316 L12: -1.3366 REMARK 3 L13: 0.0287 L23: 1.2943 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: 0.2682 S13: 0.2694 REMARK 3 S21: -0.0705 S22: 0.0047 S23: -0.3679 REMARK 3 S31: 0.0630 S32: -0.0630 S33: 0.0613 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 102 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3328 28.1289 -13.5592 REMARK 3 T TENSOR REMARK 3 T11: 0.3227 T22: 0.2543 REMARK 3 T33: 0.3103 T12: -0.0087 REMARK 3 T13: -0.0156 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.3487 L22: 3.8616 REMARK 3 L33: 3.8231 L12: -1.9516 REMARK 3 L13: -1.5531 L23: 2.1784 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: -0.1406 S13: 0.3892 REMARK 3 S21: -0.2698 S22: 0.2744 S23: -0.1761 REMARK 3 S31: -0.4586 S32: 0.2737 S33: -0.4942 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1048 15.6290 14.5592 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.5523 REMARK 3 T33: 0.2672 T12: -0.0013 REMARK 3 T13: -0.0120 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 3.3131 L22: 3.9851 REMARK 3 L33: 4.6116 L12: -0.9314 REMARK 3 L13: 0.6794 L23: -1.1874 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: -0.7474 S13: -0.1764 REMARK 3 S21: 0.5048 S22: 0.2165 S23: 0.2358 REMARK 3 S31: 0.3732 S32: -0.3286 S33: -0.1855 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 129 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8693 25.6776 3.6432 REMARK 3 T TENSOR REMARK 3 T11: 0.2673 T22: 0.3930 REMARK 3 T33: 0.3236 T12: -0.0100 REMARK 3 T13: 0.0027 T23: -0.1303 REMARK 3 L TENSOR REMARK 3 L11: 2.1182 L22: 1.9809 REMARK 3 L33: 4.7927 L12: -0.6899 REMARK 3 L13: 1.0179 L23: -1.4595 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: -0.2925 S13: 0.2749 REMARK 3 S21: 0.0225 S22: 0.1265 S23: -0.0451 REMARK 3 S31: -0.1832 S32: 0.1740 S33: -0.0123 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 151 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7706 23.3832 0.8375 REMARK 3 T TENSOR REMARK 3 T11: 0.2333 T22: 0.3455 REMARK 3 T33: 0.2704 T12: -0.0141 REMARK 3 T13: -0.0041 T23: -0.0998 REMARK 3 L TENSOR REMARK 3 L11: 1.2367 L22: 1.6460 REMARK 3 L33: 3.6682 L12: -0.7955 REMARK 3 L13: 0.2941 L23: -0.2836 REMARK 3 S TENSOR REMARK 3 S11: 0.0750 S12: -0.5916 S13: 0.1950 REMARK 3 S21: 0.1908 S22: 0.0762 S23: -0.0320 REMARK 3 S31: -0.0705 S32: -0.1061 S33: -0.0611 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2742 25.5651 13.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.4295 T22: 0.5279 REMARK 3 T33: 0.3219 T12: 0.0272 REMARK 3 T13: -0.0084 T23: -0.1811 REMARK 3 L TENSOR REMARK 3 L11: 2.1991 L22: 2.3248 REMARK 3 L33: 3.2286 L12: -0.5606 REMARK 3 L13: 0.6406 L23: -0.6528 REMARK 3 S TENSOR REMARK 3 S11: -0.0924 S12: -0.7112 S13: 0.2629 REMARK 3 S21: 0.7603 S22: 0.1285 S23: 0.0367 REMARK 3 S31: -0.5422 S32: 0.1555 S33: -0.0655 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7PS3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292117677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61012 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 68.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 43.40 REMARK 200 R MERGE (I) : 0.18100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 17.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7BEH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1 M DL-MALIC ACID PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.29150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.50750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.42400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.50750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.29150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.42400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS H 228 REMARK 465 ASP H 229 REMARK 465 LYS H 230 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 663 O HOH H 667 1.94 REMARK 500 CL CL L 301 O HOH L 519 1.95 REMARK 500 O HOH L 493 O HOH L 517 1.96 REMARK 500 O HOH H 541 O HOH H 606 1.99 REMARK 500 O HOH H 598 O HOH L 552 2.04 REMARK 500 O HOH L 460 O HOH L 514 2.08 REMARK 500 O1 MLT H 404 O HOH H 501 2.08 REMARK 500 O HOH L 407 O HOH L 555 2.09 REMARK 500 OG1 THR H 143 O HOH H 502 2.10 REMARK 500 O HOH L 491 O HOH L 547 2.16 REMARK 500 O HOH H 639 O HOH H 642 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR H 77 53.49 39.59 REMARK 500 ASN H 110 40.17 -100.73 REMARK 500 ASP H 156 65.64 68.85 REMARK 500 SER L 30 -118.93 45.86 REMARK 500 ALA L 51 -40.27 73.51 REMARK 500 SER L 77 87.37 -159.00 REMARK 500 ALA L 84 172.11 179.12 REMARK 500 ASN L 138 66.27 60.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7PS2 RELATED DB: PDB DBREF 7PS3 H 1 230 PDB 7PS3 7PS3 1 230 DBREF 7PS3 L 1 214 PDB 7PS3 7PS3 1 214 SEQRES 1 H 230 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 230 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 230 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 230 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 230 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 230 GLY ARG VAL THR MET THR ARG ASP THR SER ILE THR THR SEQRES 7 H 230 GLY TYR MET GLU LEU SER SER LEU ARG SER ASP ASP THR SEQRES 8 H 230 ALA LEU TYR TYR CYS ALA ARG VAL GLY ALA HIS ASP TYR SEQRES 9 H 230 TYR ASP SER SER ASP ASN TRP PHE ASP PRO TRP GLY GLN SEQRES 10 H 230 GLY THR LEU VAL THR VAL PHE SER ALA SER THR LYS GLY SEQRES 11 H 230 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 230 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 230 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 230 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 230 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 230 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 230 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 230 LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER VAL SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG LEU THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN GLY ILE SER SER TRP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 214 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN ALA SEQRES 8 L 214 ASN SER PHE PRO TRP THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET MLT H 401 9 HET GOL H 402 6 HET GOL H 403 6 HET MLT H 404 9 HET CL H 405 1 HET CL L 301 1 HET CL L 302 1 HETNAM MLT D-MALATE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MLT 2(C4 H6 O5) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 CL 3(CL 1-) FORMUL 10 HOH *389(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 THR H 74 ILE H 76 5 3 HELIX 3 AA3 ARG H 87 THR H 91 5 5 HELIX 4 AA4 SER H 107 TRP H 111 5 5 HELIX 5 AA5 SER H 139 LYS H 141 5 3 HELIX 6 AA6 SER H 168 ALA H 170 5 3 HELIX 7 AA7 SER H 199 LEU H 201 5 3 HELIX 8 AA8 LYS H 213 ASN H 216 5 4 HELIX 9 AA9 GLN L 79 PHE L 83 5 5 HELIX 10 AB1 SER L 121 SER L 127 1 7 HELIX 11 AB2 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AA1 4 VAL H 68 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 119 VAL H 123 1 O THR H 122 N LYS H 12 SHEET 3 AA2 6 ALA H 92 VAL H 99 -1 N TYR H 94 O THR H 119 SHEET 4 AA2 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 THR H 58 TYR H 60 -1 O ASN H 59 N TRP H 50 SHEET 1 AA3 4 SER H 132 LEU H 136 0 SHEET 2 AA3 4 THR H 147 TYR H 157 -1 O GLY H 151 N LEU H 136 SHEET 3 AA3 4 TYR H 188 PRO H 197 -1 O LEU H 190 N VAL H 154 SHEET 4 AA3 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AA4 4 THR H 143 SER H 144 0 SHEET 2 AA4 4 THR H 147 TYR H 157 -1 O THR H 147 N SER H 144 SHEET 3 AA4 4 TYR H 188 PRO H 197 -1 O LEU H 190 N VAL H 154 SHEET 4 AA4 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AA5 3 THR H 163 TRP H 166 0 SHEET 2 AA5 3 TYR H 206 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AA5 3 THR H 217 VAL H 223 -1 O VAL H 219 N VAL H 210 SHEET 1 AA6 4 MET L 4 SER L 7 0 SHEET 2 AA6 4 LEU L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AA6 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA6 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA7 6 SER L 10 SER L 14 0 SHEET 2 AA7 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AA7 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 AA7 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AA7 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA7 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AA8 4 SER L 10 SER L 14 0 SHEET 2 AA8 4 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AA8 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 AA8 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA9 4 SER L 114 PHE L 118 0 SHEET 2 AA9 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AA9 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AA9 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB1 4 ALA L 153 LEU L 154 0 SHEET 2 AB1 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB1 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB1 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.06 SSBOND 2 CYS H 152 CYS H 208 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.07 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.03 CISPEP 1 ASP H 113 PRO H 114 0 -7.64 CISPEP 2 PHE H 158 PRO H 159 0 -6.06 CISPEP 3 GLU H 160 PRO H 161 0 -1.21 CISPEP 4 SER L 7 PRO L 8 0 -3.52 CISPEP 5 PHE L 94 PRO L 95 0 1.29 CISPEP 6 TYR L 140 PRO L 141 0 -0.65 CRYST1 60.583 66.848 135.015 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016506 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014959 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007407 0.00000