HEADER STRUCTURAL PROTEIN 09-OCT-21 7PYC TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL CATALYTIC DOMAIN OF PLASMODIUM TITLE 2 FALCIPARUM CTP:PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE WITH 2- TITLE 3 AMINOPYRIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHOLINEPHOSPHATE CYTIDYLYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 5833; SOURCE 4 GENE: CTP, MAL13P1.86; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLASMODIUM FALCIPARUM CCT INHIBITORS FRAGMENTS, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.DUCLOVEL,M.GELIN,I.KRIMM,R.CERDAN,J.-F.GUICHOU REVDAT 2 31-JAN-24 7PYC 1 REMARK REVDAT 1 12-OCT-22 7PYC 0 JRNL AUTH C.DUCLOVEL,M.GELIN,S.WEIN,K.WENGELNIK,I.KRIMM,J.F.GUICHOU, JRNL AUTH 2 R.CERDAN JRNL TITL CRYSTALLOGRAPHIC SCREENING USING ULTRA-LOW-MOLECULAR-WEIGHT JRNL TITL 2 LIGANDS TO GUIDE DRUG DESIGN OF PFCCT INHIBITORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.19 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 8790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 744 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4100 - 4.0400 0.97 3052 159 0.1677 0.2268 REMARK 3 2 4.0400 - 3.2100 0.97 2983 187 0.2273 0.2609 REMARK 3 3 3.2100 - 2.8000 0.99 3151 118 0.2863 0.3100 REMARK 3 4 2.8000 - 2.5400 0.99 3111 143 0.2956 0.3017 REMARK 3 5 2.5400 - 2.3600 1.00 3143 137 0.2948 0.3497 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 615 THROUGH 642 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1787 -8.1557 -24.9011 REMARK 3 T TENSOR REMARK 3 T11: 0.4706 T22: 0.4522 REMARK 3 T33: 0.5189 T12: 0.0117 REMARK 3 T13: -0.0273 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 3.8821 L22: 5.8405 REMARK 3 L33: 1.4618 L12: 1.2281 REMARK 3 L13: 2.0171 L23: 0.8858 REMARK 3 S TENSOR REMARK 3 S11: 0.0767 S12: -0.0363 S13: 0.1214 REMARK 3 S21: 0.0433 S22: -0.1672 S23: -0.0708 REMARK 3 S31: 0.0687 S32: 0.3326 S33: 0.1585 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 643 THROUGH 662 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7833 -15.3045 -22.9072 REMARK 3 T TENSOR REMARK 3 T11: 0.4077 T22: 0.4052 REMARK 3 T33: 0.6147 T12: 0.0035 REMARK 3 T13: -0.0216 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 5.6214 L22: 3.9865 REMARK 3 L33: 3.3625 L12: -1.4551 REMARK 3 L13: 1.2912 L23: 2.5376 REMARK 3 S TENSOR REMARK 3 S11: -0.2596 S12: 0.0740 S13: -0.5272 REMARK 3 S21: 0.2610 S22: 0.0713 S23: 0.0188 REMARK 3 S31: 0.3688 S32: -0.4273 S33: 0.1715 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 663 THROUGH 695 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8263 -12.0200 -20.4472 REMARK 3 T TENSOR REMARK 3 T11: 0.4782 T22: 0.4738 REMARK 3 T33: 0.4723 T12: -0.0097 REMARK 3 T13: -0.0321 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 5.3217 L22: 3.8587 REMARK 3 L33: 2.5402 L12: -0.1502 REMARK 3 L13: -1.4251 L23: 0.7995 REMARK 3 S TENSOR REMARK 3 S11: -0.1344 S12: -0.0794 S13: -0.2100 REMARK 3 S21: 0.2161 S22: -0.0162 S23: 0.2516 REMARK 3 S31: 0.1254 S32: -0.2414 S33: 0.1257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 696 THROUGH 752 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7817 -21.5340 -28.7477 REMARK 3 T TENSOR REMARK 3 T11: 0.5122 T22: 0.4409 REMARK 3 T33: 0.4583 T12: 0.0943 REMARK 3 T13: 0.0198 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 5.6077 L22: 9.3444 REMARK 3 L33: 4.5108 L12: 1.1516 REMARK 3 L13: -0.9340 L23: -0.5917 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: -0.2610 S13: -0.3657 REMARK 3 S21: 0.7919 S22: -0.2534 S23: 0.0465 REMARK 3 S31: 0.0340 S32: 0.4639 S33: 0.2391 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 753 THROUGH 760 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8363 -4.7124 -15.5375 REMARK 3 T TENSOR REMARK 3 T11: 1.0617 T22: 0.9720 REMARK 3 T33: 0.9403 T12: 0.1272 REMARK 3 T13: -0.2153 T23: -0.1029 REMARK 3 L TENSOR REMARK 3 L11: 0.4755 L22: 1.8985 REMARK 3 L33: 2.3837 L12: -1.0621 REMARK 3 L13: -0.9739 L23: 2.0941 REMARK 3 S TENSOR REMARK 3 S11: -0.4776 S12: -0.6870 S13: -0.3074 REMARK 3 S21: 0.9869 S22: 0.0203 S23: 0.5890 REMARK 3 S31: 0.2661 S32: 1.3748 S33: 0.4302 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 761 THROUGH 775 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1245 5.9331 0.6954 REMARK 3 T TENSOR REMARK 3 T11: 0.9288 T22: 0.9906 REMARK 3 T33: 0.8175 T12: -0.0624 REMARK 3 T13: -0.0167 T23: 0.1076 REMARK 3 L TENSOR REMARK 3 L11: 3.7059 L22: 3.9448 REMARK 3 L33: 3.4579 L12: -0.6363 REMARK 3 L13: -1.0224 L23: -1.1877 REMARK 3 S TENSOR REMARK 3 S11: 0.3195 S12: -0.1493 S13: 0.3377 REMARK 3 S21: 0.5142 S22: -0.5710 S23: -1.1188 REMARK 3 S31: -0.3708 S32: 0.3848 S33: 0.0079 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 802 THROUGH 802 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0010 -16.8939 -32.4912 REMARK 3 T TENSOR REMARK 3 T11: -1.6658 T22: 1.3168 REMARK 3 T33: 0.6960 T12: 1.3591 REMARK 3 T13: -0.0547 T23: 0.2551 REMARK 3 L TENSOR REMARK 3 L11: 1.9993 L22: 1.9986 REMARK 3 L33: 2.0009 L12: 1.9976 REMARK 3 L13: 2.0005 L23: 2.0022 REMARK 3 S TENSOR REMARK 3 S11: 6.2117 S12: 4.2669 S13: 4.3075 REMARK 3 S21: -2.9712 S22: 0.7503 S23: 0.6874 REMARK 3 S31: -1.2453 S32: -4.5767 S33: -7.1137 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7PYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1292118624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96546 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8793 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.038 REMARK 200 RESOLUTION RANGE LOW (A) : 46.405 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 40.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.63200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ZCT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000 19%, TRIS PH8 0.1M 6-7-8-9 REMARK 280 -10% GUANIDINE HCL 5-6-7% GLYCEROL, VAPOR DIFFUSION, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.23100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.66450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.06600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.23100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.66450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.06600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.23100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.66450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.06600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.23100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 34.66450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.06600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -50.46200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 578 REMARK 465 HIS A 579 REMARK 465 MET A 580 REMARK 465 ALA A 581 REMARK 465 VAL A 582 REMARK 465 PRO A 583 REMARK 465 ASP A 584 REMARK 465 ASP A 585 REMARK 465 ASP A 586 REMARK 465 ASP A 587 REMARK 465 ASP A 588 REMARK 465 ASP A 589 REMARK 465 ASP A 590 REMARK 465 ASN A 591 REMARK 465 SER A 592 REMARK 465 ASN A 593 REMARK 465 ASP A 594 REMARK 465 GLU A 595 REMARK 465 SER A 596 REMARK 465 GLU A 597 REMARK 465 TYR A 598 REMARK 465 GLU A 599 REMARK 465 SER A 600 REMARK 465 SER A 601 REMARK 465 GLN A 602 REMARK 465 MET A 603 REMARK 465 ASP A 604 REMARK 465 SER A 605 REMARK 465 GLU A 606 REMARK 465 LYS A 607 REMARK 465 ASN A 608 REMARK 465 LYS A 609 REMARK 465 GLY A 610 REMARK 465 SER A 611 REMARK 465 ILE A 612 REMARK 465 LYS A 613 REMARK 465 ASN A 614 REMARK 465 ASP A 729 REMARK 465 ILE A 730 REMARK 465 PRO A 731 REMARK 465 TYR A 732 REMARK 465 ALA A 733 REMARK 465 ASN A 734 REMARK 465 ASN A 735 REMARK 465 GLN A 736 REMARK 465 LYS A 737 REMARK 465 GLU A 738 REMARK 465 ASP A 739 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 741 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 663 -64.81 -124.17 REMARK 500 GLU A 773 154.55 -48.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 7PYC A 581 775 UNP Q8IEE9 Q8IEE9_PLAF7 581 775 SEQADV 7PYC GLY A 578 UNP Q8IEE9 EXPRESSION TAG SEQADV 7PYC HIS A 579 UNP Q8IEE9 EXPRESSION TAG SEQADV 7PYC MET A 580 UNP Q8IEE9 EXPRESSION TAG SEQADV 7PYC A UNP Q8IEE9 LYS 720 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 721 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 722 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 723 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 724 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 725 DELETION SEQADV 7PYC A UNP Q8IEE9 SER 726 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 727 DELETION SEQADV 7PYC A UNP Q8IEE9 GLY 728 DELETION SEQADV 7PYC A UNP Q8IEE9 LYS 729 DELETION SEQADV 7PYC A UNP Q8IEE9 SER 730 DELETION SEQADV 7PYC A UNP Q8IEE9 PHE 731 DELETION SEQADV 7PYC A UNP Q8IEE9 SER 732 DELETION SEQADV 7PYC A UNP Q8IEE9 PHE 733 DELETION SEQADV 7PYC A UNP Q8IEE9 ASP 734 DELETION SEQADV 7PYC A UNP Q8IEE9 GLU 735 DELETION SEQADV 7PYC A UNP Q8IEE9 GLU 736 DELETION SEQADV 7PYC A UNP Q8IEE9 ASN 737 DELETION SEQRES 1 A 180 GLY HIS MET ALA VAL PRO ASP ASP ASP ASP ASP ASP ASP SEQRES 2 A 180 ASN SER ASN ASP GLU SER GLU TYR GLU SER SER GLN MET SEQRES 3 A 180 ASP SER GLU LYS ASN LYS GLY SER ILE LYS ASN SER LYS SEQRES 4 A 180 ASN VAL VAL ILE TYR ALA ASP GLY VAL TYR ASP MET LEU SEQRES 5 A 180 HIS LEU GLY HIS MET LYS GLN LEU GLU GLN ALA LYS LYS SEQRES 6 A 180 LEU PHE GLU ASN THR THR LEU ILE VAL GLY VAL THR SER SEQRES 7 A 180 ASP ASN GLU THR LYS LEU PHE LYS GLY GLN VAL VAL GLN SEQRES 8 A 180 THR LEU GLU GLU ARG THR GLU THR LEU LYS HIS ILE ARG SEQRES 9 A 180 TRP VAL ASP GLU ILE ILE SER PRO CYS PRO TRP VAL VAL SEQRES 10 A 180 THR PRO GLU PHE LEU GLU LYS TYR LYS ILE ASP TYR VAL SEQRES 11 A 180 ALA HIS ASP ASP ILE PRO TYR ALA ASN ASN GLN LYS GLU SEQRES 12 A 180 ASP ILE TYR ALA TRP LEU LYS ARG ALA GLY LYS PHE LYS SEQRES 13 A 180 ALA THR GLN ARG THR GLU GLY VAL SER THR THR ASP LEU SEQRES 14 A 180 ILE VAL ARG ILE LEU LYS ASN TYR GLU ASP TYR HET 2AP A 801 7 HET GZ6 A 802 9 HETNAM 2AP 2-AMINOPYRIDINE HETNAM GZ6 GUANIDINIUM FORMUL 2 2AP C5 H7 N2 1+ FORMUL 3 GZ6 C H6 N3 1+ FORMUL 4 HOH *7(H2 O) HELIX 1 AA1 HIS A 630 LEU A 643 1 14 HELIX 2 AA2 SER A 655 LYS A 663 1 9 HELIX 3 AA3 THR A 669 LYS A 678 1 10 HELIX 4 AA4 THR A 695 LYS A 703 1 9 HELIX 5 AA5 TYR A 741 ALA A 747 1 7 HELIX 6 AA6 SER A 760 LYS A 770 1 11 SHEET 1 AA1 5 GLU A 685 CYS A 690 0 SHEET 2 AA1 5 THR A 647 THR A 654 1 N VAL A 651 O ILE A 687 SHEET 3 AA1 5 VAL A 618 GLY A 624 1 N ILE A 620 O ILE A 650 SHEET 4 AA1 5 TYR A 706 HIS A 709 1 O ALA A 708 N TYR A 621 SHEET 5 AA1 5 PHE A 750 ALA A 752 1 O LYS A 751 N VAL A 707 CISPEP 1 SER A 688 PRO A 689 0 -2.06 CRYST1 50.462 69.329 118.132 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019817 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008465 0.00000