HEADER SIGNALING PROTEIN 11-OCT-21 7PZB TITLE STRUCTURE OF THE CLR-CAMP-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CAMP-BINDING PROTEIN-CATABOLITE GENE ACTIVATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*CP*TP*AP*GP*GP*TP*AP*AP*CP*AP*TP*TP*AP*CP*TP*CP*GP*CP*G)-3'); COMPND 8 CHAIN: C, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(*GP*CP*GP*AP*GP*TP*AP*AP*TP*GP*TP*TP*AP*C)-3'); COMPND 12 CHAIN: D, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI 1021; SOURCE 3 ORGANISM_TAXID: 266834; SOURCE 4 GENE: SMC02175; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 12 ORGANISM_TAXID: 382; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 16 ORGANISM_TAXID: 382 KEYWDS CYCLIC NUCLEOTIDE, SECOND MESSENGER, TRANSCRIPTION FACTOR, CRP KEYWDS 2 FAMILY, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.WEREL,L.-O.ESSEN REVDAT 3 07-FEB-24 7PZB 1 REMARK REVDAT 2 24-MAY-23 7PZB 1 JRNL REVDAT 1 02-NOV-22 7PZB 0 JRNL AUTH L.WEREL,N.FARMANI,E.KROL,J.SERRANIA,L.O.ESSEN,A.BECKER JRNL TITL STRUCTURAL BASIS OF DUAL SPECIFICITY OF SINORHIZOBIUM JRNL TITL 2 MELILOTI CLR, A CAMP AND CGMP RECEPTOR PROTEIN. JRNL REF MBIO V. 14 02822 2023 JRNL REFN ESSN 2150-7511 JRNL PMID 37017526 JRNL DOI 10.1128/MBIO.03028-22 REMARK 2 REMARK 2 RESOLUTION. 3.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.9 REMARK 3 NUMBER OF REFLECTIONS : 9716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.291 REMARK 3 R VALUE (WORKING SET) : 0.289 REMARK 3 FREE R VALUE : 0.333 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2000 - 4.5000 0.98 4477 214 0.2597 0.3037 REMARK 3 2 4.5000 - 3.5700 0.83 3616 184 0.3460 0.3840 REMARK 3 3 3.5700 - 3.1200 0.27 1154 71 0.3769 0.4327 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.556 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 44.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 100.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4871 REMARK 3 ANGLE : 1.082 6834 REMARK 3 CHIRALITY : 0.058 788 REMARK 3 PLANARITY : 0.014 673 REMARK 3 DIHEDRAL : 24.756 1052 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and ((resid 6 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 7 or resid 9 through 11 or resid REMARK 3 13 through 25 or resid 27 or resid 29 REMARK 3 through 34 or resid 36 through 65 or REMARK 3 resid 67 through 75 or resid 78 through REMARK 3 120 or resid 122 through 123 or resid 125 REMARK 3 through 126 or resid 128 through 130 or REMARK 3 resid 132 through 164 or resid 167 REMARK 3 through 169 or (resid 171 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 172 through 177 or resid 179 REMARK 3 through 230 or resid 301)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 6 through 7 or REMARK 3 resid 9 through 11 or resid 13 through 25 REMARK 3 or (resid 27 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 29 through 34 or resid 36 through 50 or REMARK 3 (resid 51 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 52 REMARK 3 through 65 or resid 67 through 75 or REMARK 3 resid 78 through 120 or resid 122 through REMARK 3 123 or resid 125 through 126 or resid 128 REMARK 3 through 130 or resid 132 through 164 or REMARK 3 resid 167 through 169 or resid 171 REMARK 3 through 177 or resid 179 through 230 or REMARK 3 resid 301)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7PZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1292118681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9719 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.120 REMARK 200 RESOLUTION RANGE LOW (A) : 49.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 70.2 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 5.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CYD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M 1,6-HEXANEDIOL, 0.2 M 1-BUTANOL, REMARK 280 0.2 M (RS)-1,2-BUTANEDIOL, 0.2 M 2-PROPANOL, 0.2 M 1,4- REMARK 280 BUTANEDIOL, 0.2 M 1,3-PROPANEDIOL, 0.1 M MOPS/HEPES-NA PH 7.5, REMARK 280 12.5% (V/V) MPD, 12.5% (W/V) PEG 1000, 12.5% (W/V) PEG3350, 0.44 REMARK 280 MM CLR, 25 MM CGMP, 25 MM MAGNESIUM CHLORIDE, 0.55 MM DSDNA, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.35500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.35500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 VAL A 4 REMARK 465 ILE A 5 REMARK 465 GLU A 233 REMARK 465 ASP A 234 REMARK 465 LEU A 235 REMARK 465 GLU A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 VAL B 4 REMARK 465 ILE B 5 REMARK 465 GLU B 232 REMARK 465 GLU B 233 REMARK 465 ASP B 234 REMARK 465 LEU B 235 REMARK 465 GLU B 236 REMARK 465 HIS B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 465 HIS B 243 REMARK 465 HIS B 244 REMARK 465 DT E 15 REMARK 465 DC E 16 REMARK 465 DG E 17 REMARK 465 DC E 18 REMARK 465 DG E 19 REMARK 465 DG F 1 REMARK 465 DC F 2 REMARK 465 DG F 3 REMARK 465 DA F 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 27 CG CD OE1 OE2 REMARK 470 ASP A 51 CG OD1 OD2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 174 CG CD OE1 NE2 REMARK 470 ARG B 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 GLN B 174 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 95 O1A PCG B 301 2.03 REMARK 500 NH1 ARG A 95 O2A PCG A 301 2.03 REMARK 500 ND2 ASN A 199 OP2 DG D 10 2.05 REMARK 500 O LEU B 75 NH2 ARG B 143 2.08 REMARK 500 O LEU A 75 NH2 ARG A 143 2.08 REMARK 500 NH2 ARG A 213 OP1 DG D 10 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY A 30 ND2 ASN A 177 4555 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 178 CA - CB - CG ANGL. DEV. = -14.2 DEGREES REMARK 500 PRO B 231 C - N - CD ANGL. DEV. = -31.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 7 81.47 -165.32 REMARK 500 SER A 8 -105.68 175.92 REMARK 500 ILE A 16 -53.69 69.59 REMARK 500 CYS A 26 -77.42 -90.08 REMARK 500 GLU A 27 -71.61 -26.81 REMARK 500 LEU A 28 8.16 -64.30 REMARK 500 GLU A 79 -152.26 -151.74 REMARK 500 LEU A 89 -82.35 -62.13 REMARK 500 ILE A 167 -73.14 -58.83 REMARK 500 SER A 170 33.02 -151.37 REMARK 500 GLU A 171 -102.22 -124.99 REMARK 500 MET A 172 119.51 109.28 REMARK 500 PRO A 173 -154.36 -87.32 REMARK 500 LEU A 180 -72.45 -71.86 REMARK 500 THR A 181 31.81 77.45 REMARK 500 ASP A 215 95.36 -53.35 REMARK 500 PRO A 231 -168.13 -109.34 REMARK 500 SER B 7 63.27 -165.32 REMARK 500 ALA B 9 4.16 -34.56 REMARK 500 ILE B 16 -53.69 69.59 REMARK 500 CYS B 26 -75.95 -90.95 REMARK 500 GLU B 27 -77.94 -27.16 REMARK 500 LEU B 28 -60.66 -0.79 REMARK 500 GLU B 79 -152.25 -151.74 REMARK 500 LEU B 89 -82.35 -62.13 REMARK 500 GLN B 166 -5.91 -56.98 REMARK 500 ILE B 167 -73.14 -124.94 REMARK 500 GLU B 171 -102.22 -132.98 REMARK 500 MET B 172 119.51 109.28 REMARK 500 PRO B 173 -154.36 -87.32 REMARK 500 LEU B 180 -72.45 -71.86 REMARK 500 THR B 181 31.81 77.45 REMARK 500 ASP B 215 95.37 -53.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 169 SER B 170 -136.06 REMARK 500 SER B 170 GLU B 171 -145.34 REMARK 500 ASP B 230 PRO B 231 -148.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7PZA RELATED DB: PDB REMARK 900 COMPLEX WITH CAMP DBREF 7PZB A 1 234 UNP Q92SD2 Q92SD2_RHIME 1 234 DBREF 7PZB B 1 234 UNP Q92SD2 Q92SD2_RHIME 1 234 DBREF 7PZB C 1 19 PDB 7PZB 7PZB 1 19 DBREF 7PZB D 1 14 PDB 7PZB 7PZB 1 14 DBREF 7PZB E 1 19 PDB 7PZB 7PZB 1 19 DBREF 7PZB F 1 14 PDB 7PZB 7PZB 1 14 SEQADV 7PZB LEU A 235 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB GLU A 236 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 237 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 238 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 239 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 240 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 241 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 242 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 243 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS A 244 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB LEU B 235 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB GLU B 236 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 237 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 238 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 239 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 240 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 241 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 242 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 243 UNP Q92SD2 EXPRESSION TAG SEQADV 7PZB HIS B 244 UNP Q92SD2 EXPRESSION TAG SEQRES 1 A 244 MET ALA GLU VAL ILE ARG SER SER ALA PHE TRP ARG SER SEQRES 2 A 244 PHE PRO ILE PHE GLU GLU PHE ASP SER GLU THR LEU CYS SEQRES 3 A 244 GLU LEU SER GLY ILE ALA SER TYR ARG LYS TRP SER ALA SEQRES 4 A 244 GLY THR VAL ILE PHE GLN ARG GLY ASP GLN GLY ASP TYR SEQRES 5 A 244 MET ILE VAL VAL VAL SER GLY ARG ILE LYS LEU SER LEU SEQRES 6 A 244 PHE THR PRO GLN GLY ARG GLU LEU MET LEU ARG GLN HIS SEQRES 7 A 244 GLU ALA GLY ALA LEU PHE GLY GLU MET ALA LEU LEU ASP SEQRES 8 A 244 GLY GLN PRO ARG SER ALA ASP ALA THR ALA VAL THR ALA SEQRES 9 A 244 ALA GLU GLY TYR VAL ILE GLY LYS LYS ASP PHE LEU ALA SEQRES 10 A 244 LEU ILE THR GLN ARG PRO LYS THR ALA GLU ALA VAL ILE SEQRES 11 A 244 ARG PHE LEU CYS ALA GLN LEU ARG ASP THR THR ASP ARG SEQRES 12 A 244 LEU GLU THR ILE ALA LEU TYR ASP LEU ASN ALA ARG VAL SEQRES 13 A 244 ALA ARG PHE PHE LEU ALA THR LEU ARG GLN ILE HIS GLY SEQRES 14 A 244 SER GLU MET PRO GLN SER ALA ASN LEU ARG LEU THR LEU SEQRES 15 A 244 SER GLN THR ASP ILE ALA SER ILE LEU GLY ALA SER ARG SEQRES 16 A 244 PRO LYS VAL ASN ARG ALA ILE LEU SER LEU GLU GLU SER SEQRES 17 A 244 GLY ALA ILE LYS ARG ALA ASP GLY ILE ILE CYS CYS ASN SEQRES 18 A 244 VAL GLY ARG LEU LEU SER ILE ALA ASP PRO GLU GLU ASP SEQRES 19 A 244 LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 244 MET ALA GLU VAL ILE ARG SER SER ALA PHE TRP ARG SER SEQRES 2 B 244 PHE PRO ILE PHE GLU GLU PHE ASP SER GLU THR LEU CYS SEQRES 3 B 244 GLU LEU SER GLY ILE ALA SER TYR ARG LYS TRP SER ALA SEQRES 4 B 244 GLY THR VAL ILE PHE GLN ARG GLY ASP GLN GLY ASP TYR SEQRES 5 B 244 MET ILE VAL VAL VAL SER GLY ARG ILE LYS LEU SER LEU SEQRES 6 B 244 PHE THR PRO GLN GLY ARG GLU LEU MET LEU ARG GLN HIS SEQRES 7 B 244 GLU ALA GLY ALA LEU PHE GLY GLU MET ALA LEU LEU ASP SEQRES 8 B 244 GLY GLN PRO ARG SER ALA ASP ALA THR ALA VAL THR ALA SEQRES 9 B 244 ALA GLU GLY TYR VAL ILE GLY LYS LYS ASP PHE LEU ALA SEQRES 10 B 244 LEU ILE THR GLN ARG PRO LYS THR ALA GLU ALA VAL ILE SEQRES 11 B 244 ARG PHE LEU CYS ALA GLN LEU ARG ASP THR THR ASP ARG SEQRES 12 B 244 LEU GLU THR ILE ALA LEU TYR ASP LEU ASN ALA ARG VAL SEQRES 13 B 244 ALA ARG PHE PHE LEU ALA THR LEU ARG GLN ILE HIS GLY SEQRES 14 B 244 SER GLU MET PRO GLN SER ALA ASN LEU ARG LEU THR LEU SEQRES 15 B 244 SER GLN THR ASP ILE ALA SER ILE LEU GLY ALA SER ARG SEQRES 16 B 244 PRO LYS VAL ASN ARG ALA ILE LEU SER LEU GLU GLU SER SEQRES 17 B 244 GLY ALA ILE LYS ARG ALA ASP GLY ILE ILE CYS CYS ASN SEQRES 18 B 244 VAL GLY ARG LEU LEU SER ILE ALA ASP PRO GLU GLU ASP SEQRES 19 B 244 LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 C 19 DC DT DA DG DG DT DA DA DC DA DT DT DA SEQRES 2 C 19 DC DT DC DG DC DG SEQRES 1 D 14 DG DC DG DA DG DT DA DA DT DG DT DT DA SEQRES 2 D 14 DC SEQRES 1 E 19 DC DT DA DG DG DT DA DA DC DA DT DT DA SEQRES 2 E 19 DC DT DC DG DC DG SEQRES 1 F 14 DG DC DG DA DG DT DA DA DT DG DT DT DA SEQRES 2 F 14 DC HET PCG A 301 34 HET PCG B 301 34 HETNAM PCG CYCLIC GUANOSINE MONOPHOSPHATE FORMUL 7 PCG 2(C10 H12 N5 O7 P) FORMUL 9 HOH *3(H2 O) HELIX 1 AA1 PHE A 10 PHE A 14 5 5 HELIX 2 AA2 ILE A 16 PHE A 20 5 5 HELIX 3 AA3 ASP A 21 CYS A 26 1 6 HELIX 4 AA4 GLU A 27 GLY A 30 5 4 HELIX 5 AA5 GLU A 86 ASP A 91 1 6 HELIX 6 AA6 LYS A 112 ARG A 122 1 11 HELIX 7 AA7 ARG A 122 TYR A 150 1 29 HELIX 8 AA8 ASP A 151 HIS A 168 1 18 HELIX 9 AA9 SER A 183 LEU A 191 1 9 HELIX 10 AB1 SER A 194 SER A 208 1 15 HELIX 11 AB2 VAL A 222 ASP A 230 1 9 HELIX 12 AB3 PHE B 10 PHE B 14 5 5 HELIX 13 AB4 ILE B 16 PHE B 20 5 5 HELIX 14 AB5 ASP B 21 CYS B 26 1 6 HELIX 15 AB6 GLU B 27 ILE B 31 5 5 HELIX 16 AB7 GLU B 86 ASP B 91 1 6 HELIX 17 AB8 LYS B 112 ARG B 122 1 11 HELIX 18 AB9 ARG B 122 TYR B 150 1 29 HELIX 19 AC1 ASP B 151 GLN B 166 1 16 HELIX 20 AC2 SER B 183 LEU B 191 1 9 HELIX 21 AC3 SER B 194 SER B 208 1 15 HELIX 22 AC4 VAL B 222 ASP B 230 1 9 SHEET 1 AA1 4 SER A 33 TRP A 37 0 SHEET 2 AA1 4 ALA A 105 GLY A 111 -1 O ALA A 105 N TRP A 37 SHEET 3 AA1 4 TYR A 52 SER A 58 -1 N MET A 53 O ILE A 110 SHEET 4 AA1 4 ALA A 82 PHE A 84 -1 O PHE A 84 N ILE A 54 SHEET 1 AA2 4 THR A 41 PHE A 44 0 SHEET 2 AA2 4 ASP A 98 ALA A 101 -1 O ALA A 101 N THR A 41 SHEET 3 AA2 4 ILE A 61 PHE A 66 -1 N LYS A 62 O THR A 100 SHEET 4 AA2 4 GLU A 72 HIS A 78 -1 O ARG A 76 N LEU A 63 SHEET 1 AA3 3 SER A 175 ARG A 179 0 SHEET 2 AA3 3 ILE A 217 ASN A 221 -1 O CYS A 220 N ALA A 176 SHEET 3 AA3 3 ILE A 211 ALA A 214 -1 N LYS A 212 O CYS A 219 SHEET 1 AA4 4 SER B 33 TRP B 37 0 SHEET 2 AA4 4 ALA B 105 GLY B 111 -1 O ALA B 105 N TRP B 37 SHEET 3 AA4 4 TYR B 52 SER B 58 -1 N MET B 53 O ILE B 110 SHEET 4 AA4 4 ALA B 82 PHE B 84 -1 O PHE B 84 N ILE B 54 SHEET 1 AA5 4 THR B 41 PHE B 44 0 SHEET 2 AA5 4 ASP B 98 ALA B 101 -1 O ALA B 101 N THR B 41 SHEET 3 AA5 4 ILE B 61 PHE B 66 -1 N LYS B 62 O THR B 100 SHEET 4 AA5 4 GLU B 72 HIS B 78 -1 O ARG B 76 N LEU B 63 SHEET 1 AA6 3 SER B 175 ARG B 179 0 SHEET 2 AA6 3 ILE B 217 ASN B 221 -1 O CYS B 220 N ALA B 176 SHEET 3 AA6 3 ILE B 211 ALA B 214 -1 N LYS B 212 O CYS B 219 LINK N ALA A 88 O1A PCG A 301 1555 1555 1.35 LINK N ALA B 88 O2A PCG B 301 1555 1555 1.35 CRYST1 50.710 72.900 199.990 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019720 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005000 0.00000 MTRIX1 1 -0.974223 -0.214187 0.070808 23.09532 1 MTRIX2 1 -0.221241 0.845847 -0.485381 16.05466 1 MTRIX3 1 0.044069 -0.488535 -0.871430 50.60712 1