HEADER IMMUNE SYSTEM 05-NOV-21 7Q61 TITLE STRUCTURE OF TEV CONJUGATED A2ML1 (A2ML1-TC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-2-MACROGLOBULIN-LIKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: C3 AND PZP-LIKE ALPHA-2-MACROGLOBULIN DOMAIN-CONTAINING COMPND 5 PROTEIN 9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: A2ML1, CPAMD9; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293F KEYWDS PROTEASE INHIBITOR, THIOESTER, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR N.S.NIELSEN,A.ZARANTONELLO,G.R.ANDERSEN REVDAT 2 02-NOV-22 7Q61 1 JRNL REVDAT 1 20-APR-22 7Q61 0 JRNL AUTH N.S.NIELSEN,A.ZARANTONELLO,S.L.HARWOOD,K.T.JENSEN,K.KJOGE, JRNL AUTH 2 I.B.THOGERSEN,L.SCHAUSER,J.L.KARLSEN,G.R.ANDERSEN, JRNL AUTH 3 J.J.ENGHILD JRNL TITL CRYO-EM STRUCTURES OF HUMAN A2ML1 ELUCIDATE THE JRNL TITL 2 PROTEASE-INHIBITORY MECHANISM OF THE A2M FAMILY. JRNL REF NAT COMMUN V. 13 3033 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35641520 JRNL DOI 10.1038/S41467-022-30758-X REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.880 REMARK 3 NUMBER OF PARTICLES : 464417 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7Q61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292118987. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : A2ML1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, X, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 264 REMARK 465 TYR A 265 REMARK 465 TRP A 266 REMARK 465 TYR A 267 REMARK 465 ARG A 268 REMARK 465 GLU A 269 REMARK 465 VAL A 270 REMARK 465 GLU A 271 REMARK 465 ARG A 272 REMARK 465 GLU A 273 REMARK 465 GLN A 274 REMARK 465 PRO A 634 REMARK 465 VAL A 635 REMARK 465 SER A 636 REMARK 465 GLY A 637 REMARK 465 PRO A 638 REMARK 465 TRP A 639 REMARK 465 ASP A 640 REMARK 465 PHE A 641 REMARK 465 PRO A 642 REMARK 465 GLN A 643 REMARK 465 PRO A 644 REMARK 465 LEU A 645 REMARK 465 ILE A 646 REMARK 465 ASP A 647 REMARK 465 PRO A 648 REMARK 465 MET A 649 REMARK 465 PRO A 650 REMARK 465 GLN A 651 REMARK 465 GLY A 652 REMARK 465 HIS A 653 REMARK 465 SER A 654 REMARK 465 SER A 655 REMARK 465 GLN A 656 REMARK 465 ARG A 657 REMARK 465 SER A 658 REMARK 465 ILE A 659 REMARK 465 ILE A 660 REMARK 465 TRP A 661 REMARK 465 ARG A 662 REMARK 465 PRO A 663 REMARK 465 SER A 664 REMARK 465 PHE A 665 REMARK 465 SER A 666 REMARK 465 GLU A 667 REMARK 465 GLY A 668 REMARK 465 SER A 695 REMARK 465 HIS A 696 REMARK 465 ARG A 697 REMARK 465 SER A 698 REMARK 465 PRO A 699 REMARK 465 GLU A 700 REMARK 465 TYR A 701 REMARK 465 SER A 702 REMARK 465 THR A 703 REMARK 465 ALA A 704 REMARK 465 MET A 705 REMARK 465 GLY A 706 REMARK 465 ALA A 707 REMARK 465 GLY A 708 REMARK 465 GLY A 709 REMARK 465 GLY A 710 REMARK 465 HIS A 711 REMARK 465 PRO A 712 REMARK 465 GLU A 713 REMARK 465 ALA A 714 REMARK 465 PHE A 715 REMARK 465 GLU A 716 REMARK 465 SER A 717 REMARK 465 SER A 718 REMARK 465 THR A 719 REMARK 465 PRO A 720 REMARK 465 LEU A 721 REMARK 465 HIS A 722 REMARK 465 GLN A 723 REMARK 465 ALA A 724 REMARK 465 GLU A 725 REMARK 465 LYS A 1176 REMARK 465 PRO A 1177 REMARK 465 THR A 1178 REMARK 465 PRO A 1179 REMARK 465 SER A 1180 REMARK 465 SER A 1181 REMARK 465 ASN A 1182 REMARK 465 ALA A 1183 REMARK 465 SER A 1184 REMARK 465 PRO A 1185 REMARK 465 TRP A 1186 REMARK 465 SER A 1187 REMARK 465 GLU A 1188 REMARK 465 PRO A 1189 REMARK 465 ALA A 1190 REMARK 465 PRO A 1321 REMARK 465 THR A 1322 REMARK 465 ASN A 1323 REMARK 465 MET A 1324 REMARK 465 LYS A 1325 REMARK 465 THR A 1326 REMARK 465 PHE A 1327 REMARK 465 SER A 1328 REMARK 465 LEU A 1329 REMARK 465 SER A 1330 REMARK 465 VAL A 1331 REMARK 465 GLU A 1332 REMARK 465 ILE A 1333 REMARK 465 GLY A 1334 REMARK 465 LYS A 1335 REMARK 465 ALA A 1336 REMARK 465 ARG A 1337 REMARK 465 CYS A 1338 REMARK 465 GLU A 1339 REMARK 465 GLN A 1340 REMARK 465 PRO A 1341 REMARK 465 THR A 1342 REMARK 465 SER A 1343 REMARK 465 PRO A 1344 REMARK 465 ARG A 1345 REMARK 465 SER A 1346 REMARK 465 LEU A 1347 REMARK 465 THR A 1348 REMARK 465 LEU A 1349 REMARK 465 THR A 1350 REMARK 465 ILE A 1351 REMARK 465 HIS A 1352 REMARK 465 THR A 1353 REMARK 465 SER A 1354 REMARK 465 TYR A 1355 REMARK 465 VAL A 1356 REMARK 465 GLY A 1357 REMARK 465 SER A 1358 REMARK 465 ARG A 1359 REMARK 465 SER A 1360 REMARK 465 SER A 1361 REMARK 465 SER A 1362 REMARK 465 ASN A 1363 REMARK 465 MET A 1364 REMARK 465 ALA A 1365 REMARK 465 ILE A 1366 REMARK 465 VAL A 1367 REMARK 465 GLU A 1368 REMARK 465 VAL A 1369 REMARK 465 LYS A 1370 REMARK 465 MET A 1371 REMARK 465 LEU A 1372 REMARK 465 SER A 1373 REMARK 465 GLY A 1374 REMARK 465 PHE A 1375 REMARK 465 SER A 1376 REMARK 465 PRO A 1377 REMARK 465 MET A 1378 REMARK 465 GLU A 1379 REMARK 465 GLY A 1380 REMARK 465 THR A 1381 REMARK 465 ASN A 1382 REMARK 465 GLN A 1383 REMARK 465 LEU A 1384 REMARK 465 LEU A 1385 REMARK 465 LEU A 1386 REMARK 465 GLN A 1387 REMARK 465 GLN A 1388 REMARK 465 PRO A 1389 REMARK 465 LEU A 1390 REMARK 465 VAL A 1391 REMARK 465 LYS A 1392 REMARK 465 LYS A 1393 REMARK 465 VAL A 1394 REMARK 465 GLU A 1395 REMARK 465 PHE A 1396 REMARK 465 GLY A 1397 REMARK 465 THR A 1398 REMARK 465 ASP A 1399 REMARK 465 THR A 1400 REMARK 465 LEU A 1401 REMARK 465 ASN A 1402 REMARK 465 ILE A 1403 REMARK 465 TYR A 1404 REMARK 465 LEU A 1405 REMARK 465 ASP A 1406 REMARK 465 GLU A 1407 REMARK 465 LEU A 1408 REMARK 465 ILE A 1409 REMARK 465 LYS A 1410 REMARK 465 ASN A 1411 REMARK 465 THR A 1412 REMARK 465 GLN A 1413 REMARK 465 THR A 1414 REMARK 465 TYR A 1415 REMARK 465 THR A 1416 REMARK 465 PHE A 1417 REMARK 465 THR A 1418 REMARK 465 ILE A 1419 REMARK 465 SER A 1420 REMARK 465 GLN A 1421 REMARK 465 SER A 1422 REMARK 465 VAL A 1423 REMARK 465 LEU A 1424 REMARK 465 VAL A 1425 REMARK 465 THR A 1426 REMARK 465 ASN A 1427 REMARK 465 LEU A 1428 REMARK 465 LYS A 1429 REMARK 465 PRO A 1430 REMARK 465 ALA A 1431 REMARK 465 THR A 1432 REMARK 465 ILE A 1433 REMARK 465 LYS A 1434 REMARK 465 VAL A 1435 REMARK 465 TYR A 1436 REMARK 465 ASP A 1437 REMARK 465 TYR A 1438 REMARK 465 TYR A 1439 REMARK 465 LEU A 1440 REMARK 465 PRO A 1441 REMARK 465 ASP A 1442 REMARK 465 GLU A 1443 REMARK 465 GLN A 1444 REMARK 465 ALA A 1445 REMARK 465 THR A 1446 REMARK 465 ILE A 1447 REMARK 465 GLN A 1448 REMARK 465 TYR A 1449 REMARK 465 SER A 1450 REMARK 465 ASP A 1451 REMARK 465 PRO A 1452 REMARK 465 CYS A 1453 REMARK 465 GLU A 1454 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 78 CB CYS A 78 SG -0.115 REMARK 500 GLU A 596 CD GLU A 596 OE2 0.075 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 40 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 CYS A 78 CA - CB - SG ANGL. DEV. = 28.1 DEGREES REMARK 500 MET A 953 CA - CB - CG ANGL. DEV. = 11.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 47 -117.24 58.97 REMARK 500 LEU A 65 -61.81 -94.05 REMARK 500 VAL A 224 -62.96 -122.68 REMARK 500 ASP A 287 -165.96 -117.24 REMARK 500 ASN A 459 -117.59 63.81 REMARK 500 SER A 482 75.07 50.78 REMARK 500 LYS A 512 -132.17 58.24 REMARK 500 GLN A 570 118.18 -160.78 REMARK 500 PHE A 618 15.41 -147.78 REMARK 500 TRP A 619 174.98 53.98 REMARK 500 PHE A 733 77.91 -151.09 REMARK 500 PRO A 734 42.79 -87.47 REMARK 500 THR A 761 -169.93 -162.17 REMARK 500 GLU A 835 51.14 -93.35 REMARK 500 LYS A 923 -167.19 -124.71 REMARK 500 MET A 953 152.26 69.21 REMARK 500 MET A 966 80.47 54.13 REMARK 500 ASP A1030 1.78 171.35 REMARK 500 TYR A1076 -98.55 55.12 REMARK 500 ASN A1133 174.54 70.43 REMARK 500 GLU A1169 51.47 -92.77 REMARK 500 PHE A1235 34.98 -97.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 616 PRO A 617 -138.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-13849 RELATED DB: EMDB REMARK 900 STRUCTURE OF TEV CONJUGATED A2ML1 (A2ML1-TC) DBREF 7Q61 A 19 1454 UNP A8K2U0 A2ML1_HUMAN 19 1454 SEQRES 1 A 1436 GLU LEU PRO ASN TYR LEU VAL THR LEU PRO ALA ARG LEU SEQRES 2 A 1436 ASN PHE PRO SER VAL GLN LYS VAL CYS LEU ASP LEU SER SEQRES 3 A 1436 PRO GLY TYR SER ASP VAL LYS PHE THR VAL THR LEU GLU SEQRES 4 A 1436 THR LYS ASP LYS THR GLN LYS LEU LEU GLU TYR SER GLY SEQRES 5 A 1436 LEU LYS LYS ARG HIS LEU HIS CYS ILE SER PHE LEU VAL SEQRES 6 A 1436 PRO PRO PRO ALA GLY GLY THR GLU GLU VAL ALA THR ILE SEQRES 7 A 1436 ARG VAL SER GLY VAL GLY ASN ASN ILE SER PHE GLU GLU SEQRES 8 A 1436 LYS LYS LYS VAL LEU ILE GLN ARG GLN GLY ASN GLY THR SEQRES 9 A 1436 PHE VAL GLN THR ASP LYS PRO LEU TYR THR PRO GLY GLN SEQRES 10 A 1436 GLN VAL TYR PHE ARG ILE VAL THR MET ASP SER ASN PHE SEQRES 11 A 1436 VAL PRO VAL ASN ASP LYS TYR SER MET VAL GLU LEU GLN SEQRES 12 A 1436 ASP PRO ASN SER ASN ARG ILE ALA GLN TRP LEU GLU VAL SEQRES 13 A 1436 VAL PRO GLU GLN GLY ILE VAL ASP LEU SER PHE GLN LEU SEQRES 14 A 1436 ALA PRO GLU ALA MET LEU GLY THR TYR THR VAL ALA VAL SEQRES 15 A 1436 ALA GLU GLY LYS THR PHE GLY THR PHE SER VAL GLU GLU SEQRES 16 A 1436 TYR VAL LEU PRO LYS PHE LYS VAL GLU VAL VAL GLU PRO SEQRES 17 A 1436 LYS GLU LEU SER THR VAL GLN GLU SER PHE LEU VAL LYS SEQRES 18 A 1436 ILE CYS CYS ARG TYR THR TYR GLY LYS PRO MET LEU GLY SEQRES 19 A 1436 ALA VAL GLN VAL SER VAL CYS GLN LYS ALA ASN THR TYR SEQRES 20 A 1436 TRP TYR ARG GLU VAL GLU ARG GLU GLN LEU PRO ASP LYS SEQRES 21 A 1436 CYS ARG ASN LEU SER GLY GLN THR ASP LYS THR GLY CYS SEQRES 22 A 1436 PHE SER ALA PRO VAL ASP MET ALA THR PHE ASP LEU ILE SEQRES 23 A 1436 GLY TYR ALA TYR SER HIS GLN ILE ASN ILE VAL ALA THR SEQRES 24 A 1436 VAL VAL GLU GLU GLY THR GLY VAL GLU ALA ASN ALA THR SEQRES 25 A 1436 GLN ASN ILE TYR ILE SER PRO GLN MET GLY SER MET THR SEQRES 26 A 1436 PHE GLU ASP THR SER ASN PHE TYR HIS PRO ASN PHE PRO SEQRES 27 A 1436 PHE SER GLY LYS ILE ARG VAL ARG GLY HIS ASP ASP SER SEQRES 28 A 1436 PHE LEU LYS ASN HIS LEU VAL PHE LEU VAL ILE TYR GLY SEQRES 29 A 1436 THR ASN GLY THR PHE ASN GLN THR LEU VAL THR ASP ASN SEQRES 30 A 1436 ASN GLY LEU ALA PRO PHE THR LEU GLU THR SER GLY TRP SEQRES 31 A 1436 ASN GLY THR ASP VAL SER LEU GLU GLY LYS PHE GLN MET SEQRES 32 A 1436 GLU ASP LEU VAL TYR ASN PRO GLU GLN VAL PRO ARG TYR SEQRES 33 A 1436 TYR GLN ASN ALA TYR LEU HIS LEU ARG PRO PHE TYR SER SEQRES 34 A 1436 THR THR ARG SER PHE LEU GLY ILE HIS ARG LEU ASN GLY SEQRES 35 A 1436 PRO LEU LYS CYS GLY GLN PRO GLN GLU VAL LEU VAL ASP SEQRES 36 A 1436 TYR TYR ILE ASP PRO ALA ASP ALA SER PRO ASP GLN GLU SEQRES 37 A 1436 ILE SER PHE SER TYR TYR LEU ILE GLY LYS GLY SER LEU SEQRES 38 A 1436 VAL MET GLU GLY GLN LYS HIS LEU ASN SER LYS LYS LYS SEQRES 39 A 1436 GLY LEU LYS ALA SER PHE SER LEU SER LEU THR PHE THR SEQRES 40 A 1436 SER ARG LEU ALA PRO ASP PRO SER LEU VAL ILE TYR ALA SEQRES 41 A 1436 ILE PHE PRO SER GLY GLY VAL VAL ALA ASP LYS ILE GLN SEQRES 42 A 1436 PHE SER VAL GLU MET CYS PHE ASP ASN GLN VAL SER LEU SEQRES 43 A 1436 GLY PHE SER PRO SER GLN GLN LEU PRO GLY ALA GLU VAL SEQRES 44 A 1436 GLU LEU GLN LEU GLN ALA ALA PRO GLY SER LEU CYS ALA SEQRES 45 A 1436 LEU ARG ALA VAL ASP GLU SER VAL LEU LEU LEU ARG PRO SEQRES 46 A 1436 ASP ARG GLU LEU SER ASN ARG SER VAL TYR GLY MET PHE SEQRES 47 A 1436 PRO PHE TRP TYR GLY HIS TYR PRO TYR GLN VAL ALA GLU SEQRES 48 A 1436 TYR ASP GLN CYS PRO VAL SER GLY PRO TRP ASP PHE PRO SEQRES 49 A 1436 GLN PRO LEU ILE ASP PRO MET PRO GLN GLY HIS SER SER SEQRES 50 A 1436 GLN ARG SER ILE ILE TRP ARG PRO SER PHE SER GLU GLY SEQRES 51 A 1436 THR ASP LEU PHE SER PHE PHE ARG ASP VAL GLY LEU LYS SEQRES 52 A 1436 ILE LEU SER ASN ALA LYS ILE LYS LYS PRO VAL ASP CYS SEQRES 53 A 1436 SER HIS ARG SER PRO GLU TYR SER THR ALA MET GLY ALA SEQRES 54 A 1436 GLY GLY GLY HIS PRO GLU ALA PHE GLU SER SER THR PRO SEQRES 55 A 1436 LEU HIS GLN ALA GLU ASP SER GLN VAL ARG GLN TYR PHE SEQRES 56 A 1436 PRO GLU THR TRP LEU TRP ASP LEU PHE PRO ILE GLY ASN SEQRES 57 A 1436 SER GLY LYS GLU ALA VAL HIS VAL THR VAL PRO ASP ALA SEQRES 58 A 1436 ILE THR GLU TRP LYS ALA MET SER PHE CYS THR SER GLN SEQRES 59 A 1436 SER ARG GLY PHE GLY LEU SER PRO THR VAL GLY LEU THR SEQRES 60 A 1436 ALA PHE LYS PRO PHE PHE VAL ASP LEU THR LEU PRO TYR SEQRES 61 A 1436 SER VAL VAL ARG GLY GLU SER PHE ARG LEU THR ALA THR SEQRES 62 A 1436 ILE PHE ASN TYR LEU LYS ASP CYS ILE ARG VAL GLN THR SEQRES 63 A 1436 ASP LEU ALA LYS SER HIS GLU TYR GLN LEU GLU SER TRP SEQRES 64 A 1436 ALA ASP SER GLN THR SER SER CYS LEU CYS ALA ASP ASP SEQRES 65 A 1436 ALA LYS THR HIS HIS TRP ASN ILE THR ALA VAL LYS LEU SEQRES 66 A 1436 GLY HIS ILE ASN PHE THR ILE SER THR LYS ILE LEU ASP SEQRES 67 A 1436 SER ASN GLU PRO CYS GLY GLY GLN LYS GLY PHE VAL PRO SEQRES 68 A 1436 GLN LYS GLY ARG SER ASP THR LEU ILE LYS PRO VAL LEU SEQRES 69 A 1436 VAL LYS PRO GLU GLY VAL LEU VAL GLU LYS THR HIS SER SEQRES 70 A 1436 SER LEU LEU CYS PRO LYS GLY LYS VAL ALA SER GLU SER SEQRES 71 A 1436 VAL SER LEU GLU LEU PRO VAL ASP ILE VAL PRO ASP SER SEQRES 72 A 1436 THR LYS ALA TYR VAL THR VAL LEU GLY ASP ILE MET GLY SEQRES 73 A 1436 THR ALA LEU GLN ASN LEU ASP GLY LEU VAL GLN MET PRO SEQRES 74 A 1436 SER GLY CYS GLY GLU GLN ASN MET VAL LEU PHE ALA PRO SEQRES 75 A 1436 ILE ILE TYR VAL LEU GLN TYR LEU GLU LYS ALA GLY LEU SEQRES 76 A 1436 LEU THR GLU GLU ILE ARG SER ARG ALA VAL GLY PHE LEU SEQRES 77 A 1436 GLU ILE GLY TYR GLN LYS GLU LEU MET TYR LYS HIS SER SEQRES 78 A 1436 ASN GLY SER TYR SER ALA PHE GLY GLU ARG ASP GLY ASN SEQRES 79 A 1436 GLY ASN THR TRP LEU THR ALA PHE VAL THR LYS CYS PHE SEQRES 80 A 1436 GLY GLN ALA GLN LYS PHE ILE PHE ILE ASP PRO LYS ASN SEQRES 81 A 1436 ILE GLN ASP ALA LEU LYS TRP MET ALA GLY ASN GLN LEU SEQRES 82 A 1436 PRO SER GLY CYS TYR ALA ASN VAL GLY ASN LEU LEU HIS SEQRES 83 A 1436 THR ALA MET LYS GLY GLY VAL ASP ASP GLU VAL SER LEU SEQRES 84 A 1436 THR ALA TYR VAL THR ALA ALA LEU LEU GLU MET GLY LYS SEQRES 85 A 1436 ASP VAL ASP ASP PRO MET VAL SER GLN GLY LEU ARG CYS SEQRES 86 A 1436 LEU LYS ASN SER ALA THR SER THR THR ASN LEU TYR THR SEQRES 87 A 1436 GLN ALA LEU LEU ALA TYR ILE PHE SER LEU ALA GLY GLU SEQRES 88 A 1436 MET ASP ILE ARG ASN ILE LEU LEU LYS GLN LEU ASP GLN SEQRES 89 A 1436 GLN ALA ILE ILE SER GLY GLU SER ILE TYR TRP SER GLN SEQRES 90 A 1436 LYS PRO THR PRO SER SER ASN ALA SER PRO TRP SER GLU SEQRES 91 A 1436 PRO ALA ALA VAL ASP VAL GLU LEU THR ALA TYR ALA LEU SEQRES 92 A 1436 LEU ALA GLN LEU THR LYS PRO SER LEU THR GLN LYS GLU SEQRES 93 A 1436 ILE ALA LYS ALA THR SER ILE VAL ALA TRP LEU ALA LYS SEQRES 94 A 1436 GLN HIS ASN ALA TYR GLY GLY PHE SER SER THR GLN ASP SEQRES 95 A 1436 THR VAL VAL ALA LEU GLN ALA LEU ALA LYS TYR ALA THR SEQRES 96 A 1436 THR ALA TYR MET PRO SER GLU GLU ILE ASN LEU VAL VAL SEQRES 97 A 1436 LYS SER THR GLU ASN PHE GLN ARG THR PHE ASN ILE GLN SEQRES 98 A 1436 SER VAL ASN ARG LEU VAL PHE GLN GLN ASP THR LEU PRO SEQRES 99 A 1436 ASN VAL PRO GLY MET TYR THR LEU GLU ALA SER GLY GLN SEQRES 100 A 1436 GLY CYS VAL TYR VAL GLN THR VAL LEU ARG TYR ASN ILE SEQRES 101 A 1436 LEU PRO PRO THR ASN MET LYS THR PHE SER LEU SER VAL SEQRES 102 A 1436 GLU ILE GLY LYS ALA ARG CYS GLU GLN PRO THR SER PRO SEQRES 103 A 1436 ARG SER LEU THR LEU THR ILE HIS THR SER TYR VAL GLY SEQRES 104 A 1436 SER ARG SER SER SER ASN MET ALA ILE VAL GLU VAL LYS SEQRES 105 A 1436 MET LEU SER GLY PHE SER PRO MET GLU GLY THR ASN GLN SEQRES 106 A 1436 LEU LEU LEU GLN GLN PRO LEU VAL LYS LYS VAL GLU PHE SEQRES 107 A 1436 GLY THR ASP THR LEU ASN ILE TYR LEU ASP GLU LEU ILE SEQRES 108 A 1436 LYS ASN THR GLN THR TYR THR PHE THR ILE SER GLN SER SEQRES 109 A 1436 VAL LEU VAL THR ASN LEU LYS PRO ALA THR ILE LYS VAL SEQRES 110 A 1436 TYR ASP TYR TYR LEU PRO ASP GLU GLN ALA THR ILE GLN SEQRES 111 A 1436 TYR SER ASP PRO CYS GLU HET NAG X 1 14 HET NAG X 2 14 HET NAG B 1 14 HET NAG B 2 14 HET NAG A1501 14 HET NAG A1502 14 HET NAG A1503 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 7(C8 H15 N O6) HELIX 1 AA1 ASN A 508 LYS A 512 5 5 HELIX 2 AA2 GLU A 596 ARG A 602 1 7 HELIX 3 AA3 SER A 608 MET A 615 1 8 HELIX 4 AA4 ASP A 670 ASP A 677 1 8 HELIX 5 AA5 TRP A 837 ASP A 839 5 3 HELIX 6 AA6 CYS A 970 GLN A 973 5 4 HELIX 7 AA7 ASN A 974 LYS A 990 1 17 HELIX 8 AA8 THR A 995 GLN A 1011 1 17 HELIX 9 AA9 ASN A 1034 GLY A 1046 1 13 HELIX 10 AB1 GLN A 1047 PHE A 1051 5 5 HELIX 11 AB2 PRO A 1056 GLN A 1070 1 15 HELIX 12 AB3 ASP A 1093 LEU A 1106 1 14 HELIX 13 AB4 ASP A 1114 LYS A 1125 1 12 HELIX 14 AB5 ASN A 1126 THR A 1131 1 6 HELIX 15 AB6 LEU A 1134 PHE A 1144 1 11 HELIX 16 AB7 VAL A 1192 LEU A 1205 1 14 HELIX 17 AB8 THR A 1211 ALA A 1226 1 16 HELIX 18 AB9 GLN A 1239 ALA A 1255 1 17 SHEET 1 AA1 4 LEU A 76 LEU A 82 0 SHEET 2 AA1 4 VAL A 36 ASP A 42 -1 N VAL A 39 O ILE A 79 SHEET 3 AA1 4 LEU A 24 PRO A 28 -1 N THR A 26 O CYS A 40 SHEET 4 AA1 4 LEU A 680 SER A 684 -1 O LEU A 683 N VAL A 25 SHEET 1 AA2 5 ARG A 30 ASN A 32 0 SHEET 2 AA2 5 ILE A 105 GLN A 116 1 O LEU A 114 N LEU A 31 SHEET 3 AA2 5 GLU A 91 GLY A 102 -1 N GLU A 92 O ILE A 115 SHEET 4 AA2 5 LYS A 51 GLU A 57 -1 N THR A 53 O SER A 99 SHEET 5 AA2 5 THR A 62 SER A 69 -1 O LEU A 65 N VAL A 54 SHEET 1 AA3 3 GLY A 121 THR A 126 0 SHEET 2 AA3 3 GLN A 136 MET A 144 -1 O VAL A 142 N PHE A 123 SHEET 3 AA3 3 ILE A 180 GLN A 186 -1 O PHE A 185 N VAL A 137 SHEET 1 AA4 5 LEU A 130 TYR A 131 0 SHEET 2 AA4 5 THR A 205 VAL A 211 1 O SER A 210 N TYR A 131 SHEET 3 AA4 5 GLY A 194 VAL A 200 -1 N TYR A 196 O PHE A 209 SHEET 4 AA4 5 TYR A 155 GLN A 161 -1 N GLN A 161 O THR A 197 SHEET 5 AA4 5 ARG A 167 VAL A 174 -1 O ALA A 169 N LEU A 160 SHEET 1 AA5 3 PHE A 219 VAL A 223 0 SHEET 2 AA5 3 SER A 235 TYR A 244 -1 O ARG A 243 N LYS A 220 SHEET 3 AA5 3 CYS A 291 ASP A 297 -1 O PHE A 292 N ILE A 240 SHEET 1 AA6 5 LEU A 229 SER A 230 0 SHEET 2 AA6 5 GLU A 326 SER A 336 1 O SER A 336 N LEU A 229 SHEET 3 AA6 5 TYR A 308 GLU A 320 -1 N ALA A 316 O ALA A 329 SHEET 4 AA6 5 GLY A 252 ALA A 262 -1 N CYS A 259 O ASN A 313 SHEET 5 AA6 5 LYS A 278 GLN A 285 -1 O GLY A 284 N VAL A 254 SHEET 1 AA7 4 LEU A 398 LEU A 403 0 SHEET 2 AA7 4 PHE A 357 ARG A 364 -1 N GLY A 359 O PHE A 401 SHEET 3 AA7 4 GLN A 338 THR A 347 -1 N SER A 341 O ARG A 364 SHEET 4 AA7 4 TYR A 434 GLN A 436 1 O TYR A 434 N MET A 339 SHEET 1 AA8 5 PHE A 350 TYR A 351 0 SHEET 2 AA8 5 ALA A 438 PRO A 444 1 O ARG A 443 N TYR A 351 SHEET 3 AA8 5 VAL A 413 LYS A 418 -1 N LEU A 415 O LEU A 440 SHEET 4 AA8 5 LEU A 375 TYR A 381 -1 N VAL A 379 O GLU A 416 SHEET 5 AA8 5 ASN A 388 VAL A 392 -1 O LEU A 391 N VAL A 376 SHEET 1 AA9 3 PHE A 452 ILE A 455 0 SHEET 2 AA9 3 PRO A 467 TYR A 475 -1 O ASP A 473 N GLY A 454 SHEET 3 AA9 3 ALA A 516 THR A 523 -1 O LEU A 520 N VAL A 470 SHEET 1 AB1 4 SER A 498 LEU A 507 0 SHEET 2 AB1 4 ILE A 487 GLY A 495 -1 N LEU A 493 O MET A 501 SHEET 3 AB1 4 SER A 533 ILE A 539 -1 O SER A 533 N ILE A 494 SHEET 4 AB1 4 VAL A 545 GLN A 551 -1 O ASP A 548 N ILE A 536 SHEET 1 AB2 3 SER A 563 SER A 567 0 SHEET 2 AB2 3 GLU A 576 GLN A 582 -1 O GLU A 578 N SER A 567 SHEET 3 AB2 3 LYS A 749 THR A 755 -1 O VAL A 752 N LEU A 579 SHEET 1 AB3 5 GLN A 570 GLN A 571 0 SHEET 2 AB3 5 VAL A 782 ALA A 786 1 O THR A 785 N GLN A 571 SHEET 3 AB3 5 THR A 761 SER A 771 -1 N TRP A 763 O LEU A 784 SHEET 4 AB3 5 LEU A 588 ASP A 595 -1 N VAL A 594 O LYS A 764 SHEET 5 AB3 5 THR A 736 PRO A 743 -1 O PHE A 742 N CYS A 589 SHEET 1 AB4 4 GLN A 570 GLN A 571 0 SHEET 2 AB4 4 VAL A 782 ALA A 786 1 O THR A 785 N GLN A 571 SHEET 3 AB4 4 THR A 761 SER A 771 -1 N TRP A 763 O LEU A 784 SHEET 4 AB4 4 GLY A 775 LEU A 778 -1 O GLY A 775 N SER A 771 SHEET 1 AB5 3 VAL A 729 ARG A 730 0 SHEET 2 AB5 3 SER A 894 LYS A 904 1 O THR A 896 N ARG A 730 SHEET 3 AB5 3 SER A 799 VAL A 801 1 N VAL A 800 O LEU A 902 SHEET 1 AB6 5 VAL A 729 ARG A 730 0 SHEET 2 AB6 5 SER A 894 LYS A 904 1 O THR A 896 N ARG A 730 SHEET 3 AB6 5 GLY A 864 ILE A 874 -1 N ILE A 870 O LEU A 897 SHEET 4 AB6 5 ILE A 820 LEU A 826 -1 N ASP A 825 O SER A 871 SHEET 5 AB6 5 GLN A 841 LEU A 846 -1 O SER A 844 N VAL A 822 SHEET 1 AB7 4 PHE A 790 THR A 795 0 SHEET 2 AB7 4 SER A 805 ASN A 814 -1 O THR A 811 N ASP A 793 SHEET 3 AB7 4 ASP A 850 ALA A 860 -1 O LYS A 852 N ILE A 812 SHEET 4 AB7 4 TYR A 832 LEU A 834 -1 N GLN A 833 O THR A 859 SHEET 1 AB8 4 VAL A 908 LEU A 918 0 SHEET 2 AB8 4 VAL A1308 ILE A1318 -1 O TYR A1316 N VAL A 910 SHEET 3 AB8 4 LYS A 943 LEU A 949 -1 N LEU A 949 O TYR A1309 SHEET 4 AB8 4 GLN A1287 THR A1290 -1 O ASP A1289 N VAL A 946 SHEET 1 AB9 4 LYS A 921 SER A 930 0 SHEET 2 AB9 4 MET A1297 GLN A1305 -1 O TYR A1298 N VAL A 929 SHEET 3 AB9 4 GLU A1261 SER A1268 -1 N ASN A1263 O SER A1303 SHEET 4 AB9 4 ARG A1274 ILE A1278 -1 O PHE A1276 N LEU A1264 SHEET 1 AC1 2 ILE A1165 ILE A1166 0 SHEET 2 AC1 2 ILE A1171 TYR A1172 -1 O TYR A1172 N ILE A1165 SSBOND 1 CYS A 40 CYS A 78 1555 1555 2.07 SSBOND 2 CYS A 241 CYS A 291 1555 1555 2.03 SSBOND 3 CYS A 259 CYS A 279 1555 1555 2.03 SSBOND 4 CYS A 464 CYS A 557 1555 1555 2.03 SSBOND 5 CYS A 589 CYS A 769 1555 1555 2.02 SSBOND 6 CYS A 633 CYS A 694 1555 1555 2.03 SSBOND 7 CYS A 819 CYS A 847 1555 1555 2.04 SSBOND 8 CYS A 845 CYS A 881 1555 1555 2.03 SSBOND 9 CYS A 919 CYS A 1307 1555 1555 2.03 SSBOND 10 CYS A 1075 CYS A 1123 1555 1555 2.03 LINK ND2 ASN A 120 C1 NAG X 1 1555 1555 1.44 LINK ND2 ASN A 328 C1 NAG A1501 1555 1555 1.44 LINK ND2 ASN A 609 C1 NAG A1502 1555 1555 1.45 LINK ND2 ASN A 857 C1 NAG A1503 1555 1555 1.44 LINK ND2 ASN A 867 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG X 1 C1 NAG X 2 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 CISPEP 1 SER A 567 PRO A 568 0 3.27 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000