HEADER TRANSCRIPTION 09-NOV-21 7Q7U TITLE CRYSTAL STRUCTURE OF HUMAN BCL6 BTB DOMAIN IN COMPLEX WITH COMPOUND 9A COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET48B KEYWDS TRANSCRIPTION, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR Y.-V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 3 31-JAN-24 7Q7U 1 REMARK REVDAT 2 06-JUL-22 7Q7U 1 JRNL REVDAT 1 15-JUN-22 7Q7U 0 JRNL AUTH O.A.DAVIS,K.J.CHEUNG,A.BRENNAN,M.G.LLOYD,M.J.RODRIGUES, JRNL AUTH 2 O.A.PIERRAT,G.W.COLLIE,Y.V.LE BIHAN,R.HUCKVALE,A.C.HARNDEN, JRNL AUTH 3 A.VARELA,M.D.BRIGHT,P.EVE,A.HAYES,A.T.HENLEY,M.D.CARTER, JRNL AUTH 4 P.C.MCANDREW,R.TALBOT,R.BURKE,R.L.M.VAN MONTFORT, JRNL AUTH 5 F.I.RAYNAUD,O.W.ROSSANESE,M.MENICONI,B.R.BELLENIE,S.HOELDER JRNL TITL OPTIMIZING SHAPE COMPLEMENTARITY ENABLES THE DISCOVERY OF JRNL TITL 2 POTENT TRICYCLIC BCL6 INHIBITORS. JRNL REF J.MED.CHEM. V. 65 8169 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35657291 JRNL DOI 10.1021/ACS.JMEDCHEM.1C02174 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (18-SEP-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1117 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.79 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.04 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 448 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2224 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 429 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE : 0.2096 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.24 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 19 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1024 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84290 REMARK 3 B22 (A**2) : -0.84290 REMARK 3 B33 (A**2) : 1.68590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.230 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.105 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.104 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.094 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.096 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1122 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1523 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 410 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 209 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1122 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 150 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 13 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1084 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.88 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.94 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.61 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|-1 - 13} REMARK 3 ORIGIN FOR THE GROUP (A): -19.7824 30.9935 3.0391 REMARK 3 T TENSOR REMARK 3 T11: -0.0718 T22: 0.0554 REMARK 3 T33: -0.0036 T12: -0.0588 REMARK 3 T13: 0.0112 T23: 0.0798 REMARK 3 L TENSOR REMARK 3 L11: 5.6396 L22: 4.9598 REMARK 3 L33: 6.0185 L12: 3.2860 REMARK 3 L13: -3.5155 L23: 1.1583 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.2446 S13: 0.2642 REMARK 3 S21: -0.0991 S22: 0.1408 S23: -0.3099 REMARK 3 S31: -0.1434 S32: 0.0390 S33: -0.1609 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|14 - 40} REMARK 3 ORIGIN FOR THE GROUP (A): -37.4129 21.5611 21.5495 REMARK 3 T TENSOR REMARK 3 T11: 0.0127 T22: -0.0105 REMARK 3 T33: -0.0132 T12: 0.0066 REMARK 3 T13: 0.0161 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.8239 L22: 1.3571 REMARK 3 L33: 2.6771 L12: -0.0136 REMARK 3 L13: -0.2781 L23: -1.0687 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: -0.0662 S13: 0.1394 REMARK 3 S21: 0.1892 S22: 0.0718 S23: 0.1364 REMARK 3 S31: -0.1458 S32: -0.1527 S33: -0.0968 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|41 - 46} REMARK 3 ORIGIN FOR THE GROUP (A): -39.5014 16.0358 28.7716 REMARK 3 T TENSOR REMARK 3 T11: 0.0322 T22: 0.0130 REMARK 3 T33: -0.0172 T12: -0.0320 REMARK 3 T13: 0.0161 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 1.6456 L22: 0.0137 REMARK 3 L33: 8.3155 L12: -0.6917 REMARK 3 L13: -1.8077 L23: -2.1122 REMARK 3 S TENSOR REMARK 3 S11: 0.0631 S12: -0.0457 S13: 0.1150 REMARK 3 S21: 0.0473 S22: 0.0721 S23: 0.0764 REMARK 3 S31: 0.1290 S32: -0.1490 S33: -0.1352 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|47 - 62} REMARK 3 ORIGIN FOR THE GROUP (A): -32.0200 9.3233 18.6311 REMARK 3 T TENSOR REMARK 3 T11: 0.0690 T22: -0.0622 REMARK 3 T33: -0.0033 T12: -0.0101 REMARK 3 T13: 0.0120 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.2321 L22: 5.3037 REMARK 3 L33: 2.3278 L12: 1.2286 REMARK 3 L13: -0.6951 L23: -2.7841 REMARK 3 S TENSOR REMARK 3 S11: -0.1613 S12: 0.0775 S13: 0.0296 REMARK 3 S21: -0.1195 S22: 0.0158 S23: -0.0361 REMARK 3 S31: 0.2945 S32: 0.0556 S33: 0.1456 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|63 - 68} REMARK 3 ORIGIN FOR THE GROUP (A): -39.7120 1.3457 16.6886 REMARK 3 T TENSOR REMARK 3 T11: 0.1639 T22: -0.0764 REMARK 3 T33: -0.0327 T12: -0.0959 REMARK 3 T13: -0.0701 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 1.7703 L22: 5.4665 REMARK 3 L33: 3.4772 L12: 0.1506 REMARK 3 L13: 3.3804 L23: -0.0343 REMARK 3 S TENSOR REMARK 3 S11: 0.0088 S12: -0.0648 S13: -0.4366 REMARK 3 S21: -0.1832 S22: -0.2014 S23: 0.0954 REMARK 3 S31: 0.1189 S32: -0.5598 S33: 0.1927 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|69 - 92} REMARK 3 ORIGIN FOR THE GROUP (A): -32.8124 13.2387 29.3987 REMARK 3 T TENSOR REMARK 3 T11: 0.0678 T22: -0.0231 REMARK 3 T33: -0.0422 T12: -0.0612 REMARK 3 T13: -0.0206 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.5047 L22: 2.4163 REMARK 3 L33: 1.4335 L12: 0.6859 REMARK 3 L13: 0.5043 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.2296 S12: -0.0566 S13: 0.1084 REMARK 3 S21: 0.3037 S22: -0.1917 S23: 0.0716 REMARK 3 S31: 0.0939 S32: 0.0331 S33: -0.0379 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|93 - 101} REMARK 3 ORIGIN FOR THE GROUP (A): -21.8695 22.0809 33.5428 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: -0.0030 REMARK 3 T33: -0.0511 T12: -0.1370 REMARK 3 T13: -0.0990 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.5922 L22: 0.3771 REMARK 3 L33: 8.3155 L12: 0.6585 REMARK 3 L13: 1.6217 L23: -1.1228 REMARK 3 S TENSOR REMARK 3 S11: 0.2353 S12: -0.2502 S13: 0.1834 REMARK 3 S21: 0.2833 S22: -0.3794 S23: -0.2596 REMARK 3 S31: -0.3688 S32: -0.3220 S33: 0.1440 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|102 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): -23.4444 10.2996 30.8519 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: -0.0250 REMARK 3 T33: -0.0009 T12: -0.0072 REMARK 3 T13: -0.0751 T23: 0.1211 REMARK 3 L TENSOR REMARK 3 L11: 2.9856 L22: 2.9268 REMARK 3 L33: 4.0080 L12: 3.3966 REMARK 3 L13: 2.0858 L23: 2.2081 REMARK 3 S TENSOR REMARK 3 S11: 0.3911 S12: -0.1582 S13: -0.3801 REMARK 3 S21: 0.1776 S22: -0.4705 S23: -0.4302 REMARK 3 S31: 0.3052 S32: 0.0333 S33: 0.0794 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|115 - 129} REMARK 3 ORIGIN FOR THE GROUP (A): -13.1730 14.3722 31.7247 REMARK 3 T TENSOR REMARK 3 T11: -0.0477 T22: -0.0815 REMARK 3 T33: 0.1735 T12: 0.0464 REMARK 3 T13: -0.0689 T23: 0.1357 REMARK 3 L TENSOR REMARK 3 L11: 3.3192 L22: 5.6099 REMARK 3 L33: 1.3142 L12: 2.2854 REMARK 3 L13: 3.3014 L23: 0.1027 REMARK 3 S TENSOR REMARK 3 S11: -0.1085 S12: 0.2540 S13: -0.2179 REMARK 3 S21: 0.1041 S22: -0.1344 S23: -0.7110 REMARK 3 S31: 0.0494 S32: 0.0041 S33: 0.2430 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Q7U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292119153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22461 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 47.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 24.50 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 24.60 REMARK 200 R MERGE FOR SHELL (I) : 2.94000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 MICROLITER OF BCL6-BTB AT 10 MG/ML REMARK 280 PLUS 1.5 MICROLITER OF A CRYSTALLISATION SOLUTION CONSISTING OF REMARK 280 0.1 M TRIS PH 7.5 AND 0.80 M NA/K TARTRATE, AGAINST 300 REMARK 280 MICROLITER OF CRYSTALLISATION SOLUTION., VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.35000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.70000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.02500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 138.37500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.67500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.35000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 110.70000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 138.37500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.02500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.67500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -33.83150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 58.59788 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.67500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 443 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -14 REMARK 465 PRO A -13 REMARK 465 GLY A -12 REMARK 465 LEU A -11 REMARK 465 ASP A -10 REMARK 465 TYR A -9 REMARK 465 LYS A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 GLU A -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 OD1 REMARK 470 LEU A 0 CD1 REMARK 470 ASP A 6 OD2 REMARK 470 ARG A 13 NH1 NH2 REMARK 470 ARG A 28 NH2 REMARK 470 GLU A 41 OE1 REMARK 470 GLN A 64 NE2 REMARK 470 ARG A 94 NH1 NH2 REMARK 470 ARG A 98 CZ NH1 NH2 REMARK 470 GLU A 115 CD OE1 OE2 REMARK 470 HIS A 116 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 123 NZ REMARK 470 LYS A 126 CE NZ REMARK 470 GLU A 129 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -122.88 55.26 REMARK 500 SER A 93 3.91 80.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Q7U A 5 129 UNP P41182 BCL6_HUMAN 5 129 SEQADV 7Q7U GLY A -14 UNP P41182 EXPRESSION TAG SEQADV 7Q7U PRO A -13 UNP P41182 EXPRESSION TAG SEQADV 7Q7U GLY A -12 UNP P41182 EXPRESSION TAG SEQADV 7Q7U LEU A -11 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASP A -10 UNP P41182 EXPRESSION TAG SEQADV 7Q7U TYR A -9 UNP P41182 EXPRESSION TAG SEQADV 7Q7U LYS A -8 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASP A -7 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASP A -6 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASP A -5 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASP A -4 UNP P41182 EXPRESSION TAG SEQADV 7Q7U LYS A -3 UNP P41182 EXPRESSION TAG SEQADV 7Q7U GLU A -2 UNP P41182 EXPRESSION TAG SEQADV 7Q7U ASN A -1 UNP P41182 EXPRESSION TAG SEQADV 7Q7U LEU A 0 UNP P41182 EXPRESSION TAG SEQADV 7Q7U TYR A 1 UNP P41182 EXPRESSION TAG SEQADV 7Q7U PHE A 2 UNP P41182 EXPRESSION TAG SEQADV 7Q7U GLN A 3 UNP P41182 EXPRESSION TAG SEQADV 7Q7U GLY A 4 UNP P41182 EXPRESSION TAG SEQRES 1 A 144 GLY PRO GLY LEU ASP TYR LYS ASP ASP ASP ASP LYS GLU SEQRES 2 A 144 ASN LEU TYR PHE GLN GLY ALA ASP SER CYS ILE GLN PHE SEQRES 3 A 144 THR ARG HIS ALA SER ASP VAL LEU LEU ASN LEU ASN ARG SEQRES 4 A 144 LEU ARG SER ARG ASP ILE LEU THR ASP VAL VAL ILE VAL SEQRES 5 A 144 VAL SER ARG GLU GLN PHE ARG ALA HIS LYS THR VAL LEU SEQRES 6 A 144 MET ALA CYS SER GLY LEU PHE TYR SER ILE PHE THR ASP SEQRES 7 A 144 GLN LEU LYS CYS ASN LEU SER VAL ILE ASN LEU ASP PRO SEQRES 8 A 144 GLU ILE ASN PRO GLU GLY PHE CYS ILE LEU LEU ASP PHE SEQRES 9 A 144 MET TYR THR SER ARG LEU ASN LEU ARG GLU GLY ASN ILE SEQRES 10 A 144 MET ALA VAL MET ALA THR ALA MET TYR LEU GLN MET GLU SEQRES 11 A 144 HIS VAL VAL ASP THR CYS ARG LYS PHE ILE LYS ALA SER SEQRES 12 A 144 GLU HET 9IE A 200 28 HETNAM 9IE 2-CHLORANYL-4-[[(2S)-2,7-DIMETHYL-6-OXIDANYLIDENE-1,2, HETNAM 2 9IE 3,4-TETRAHYDRO-[1,4]OXAZEPINO[2,3-C]QUINOLIN-10- HETNAM 3 9IE YL]AMINO]PYRIDINE-3-CARBONITRILE FORMUL 2 9IE C20 H18 CL N5 O2 FORMUL 3 HOH *150(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 ASP A 63 1 10 HELIX 4 AA4 LEU A 65 LEU A 69 5 5 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 GLN A 113 1 13 HELIX 7 AA7 MET A 114 GLU A 129 1 16 SHEET 1 AA1 2 TYR A 1 GLN A 3 0 SHEET 2 AA1 2 ILE A 9 PHE A 11 -1 O GLN A 10 N PHE A 2 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 CRYST1 67.663 67.663 166.050 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014779 0.008533 0.000000 0.00000 SCALE2 0.000000 0.017065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006022 0.00000