HEADER TRANSCRIPTION 09-NOV-21 7Q7V TITLE CRYSTAL STRUCTURE OF HUMAN BCL6 BTB DOMAIN IN COMPLEX WITH COMPOUND TITLE 2 12A COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET48B KEYWDS TRANSCRIPTION, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RODRIGUES,Y.-V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 3 31-JAN-24 7Q7V 1 REMARK REVDAT 2 06-JUL-22 7Q7V 1 JRNL REVDAT 1 15-JUN-22 7Q7V 0 JRNL AUTH O.A.DAVIS,K.J.CHEUNG,A.BRENNAN,M.G.LLOYD,M.J.RODRIGUES, JRNL AUTH 2 O.A.PIERRAT,G.W.COLLIE,Y.V.LE BIHAN,R.HUCKVALE,A.C.HARNDEN, JRNL AUTH 3 A.VARELA,M.D.BRIGHT,P.EVE,A.HAYES,A.T.HENLEY,M.D.CARTER, JRNL AUTH 4 P.C.MCANDREW,R.TALBOT,R.BURKE,R.L.M.VAN MONTFORT, JRNL AUTH 5 F.I.RAYNAUD,O.W.ROSSANESE,M.MENICONI,B.R.BELLENIE,S.HOELDER JRNL TITL OPTIMIZING SHAPE COMPLEMENTARITY ENABLES THE DISCOVERY OF JRNL TITL 2 POTENT TRICYCLIC BCL6 INHIBITORS. JRNL REF J.MED.CHEM. V. 65 8169 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35657291 JRNL DOI 10.1021/ACS.JMEDCHEM.1C02174 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (19-MAR-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1062 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.05 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 425 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2368 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 405 REMARK 3 BIN R VALUE (WORKING SET) : 0.2369 REMARK 3 BIN FREE R VALUE : 0.2332 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 20 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1033 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.39320 REMARK 3 B22 (A**2) : 1.39320 REMARK 3 B33 (A**2) : -2.78640 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.097 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.093 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.090 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.089 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1137 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1542 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 414 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 217 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1137 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 149 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 7 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1024 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.87 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.30 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|-1 - 27} REMARK 3 ORIGIN FOR THE GROUP (A): -26.4631 28.9254 10.0657 REMARK 3 T TENSOR REMARK 3 T11: -0.0008 T22: 0.0400 REMARK 3 T33: -0.0389 T12: -0.0370 REMARK 3 T13: -0.0124 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 2.7684 L22: 0.9130 REMARK 3 L33: 3.3327 L12: 0.5638 REMARK 3 L13: -2.8550 L23: -0.8758 REMARK 3 S TENSOR REMARK 3 S11: 0.0732 S12: -0.0338 S13: 0.1143 REMARK 3 S21: 0.1791 S22: -0.0537 S23: -0.0465 REMARK 3 S31: -0.2665 S32: 0.1446 S33: -0.0195 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|28 - 33} REMARK 3 ORIGIN FOR THE GROUP (A): -43.5078 21.4175 19.8971 REMARK 3 T TENSOR REMARK 3 T11: -0.0233 T22: 0.0504 REMARK 3 T33: -0.0434 T12: 0.0095 REMARK 3 T13: 0.0303 T23: 0.0605 REMARK 3 L TENSOR REMARK 3 L11: 2.6780 L22: 6.6833 REMARK 3 L33: 2.4659 L12: 1.3242 REMARK 3 L13: 1.9355 L23: -1.1850 REMARK 3 S TENSOR REMARK 3 S11: 0.1337 S12: -0.0116 S13: -0.0921 REMARK 3 S21: -0.1850 S22: 0.1382 S23: 0.5753 REMARK 3 S31: -0.1967 S32: -0.3333 S33: -0.2718 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|34 - 46} REMARK 3 ORIGIN FOR THE GROUP (A): -39.7454 13.3711 29.9512 REMARK 3 T TENSOR REMARK 3 T11: 0.0436 T22: 0.0211 REMARK 3 T33: -0.0505 T12: -0.0136 REMARK 3 T13: 0.0259 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 0.2744 L22: 3.1624 REMARK 3 L33: 8.3155 L12: -1.1505 REMARK 3 L13: -0.3079 L23: -3.1129 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: 0.0253 S13: 0.0219 REMARK 3 S21: 0.3251 S22: 0.1599 S23: 0.3321 REMARK 3 S31: -0.0801 S32: -0.2198 S33: -0.1520 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|47 - 61} REMARK 3 ORIGIN FOR THE GROUP (A): -32.0725 8.9907 18.8931 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: -0.0356 REMARK 3 T33: -0.0356 T12: -0.0148 REMARK 3 T13: 0.0043 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 3.9055 L22: 4.5818 REMARK 3 L33: 1.2449 L12: 1.0753 REMARK 3 L13: 0.3997 L23: -0.8309 REMARK 3 S TENSOR REMARK 3 S11: -0.0613 S12: 0.2142 S13: -0.1359 REMARK 3 S21: 0.0149 S22: 0.0386 S23: -0.0625 REMARK 3 S31: 0.1489 S32: -0.0171 S33: 0.0227 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|62 - 68} REMARK 3 ORIGIN FOR THE GROUP (A): -39.2297 1.4365 16.4615 REMARK 3 T TENSOR REMARK 3 T11: 0.0918 T22: -0.0512 REMARK 3 T33: -0.0315 T12: -0.1132 REMARK 3 T13: -0.0748 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 7.2217 L22: 5.4306 REMARK 3 L33: 4.5863 L12: -0.3439 REMARK 3 L13: 2.2083 L23: 0.5480 REMARK 3 S TENSOR REMARK 3 S11: 0.1112 S12: -0.0070 S13: -0.4298 REMARK 3 S21: -0.3470 S22: 0.0727 S23: -0.0446 REMARK 3 S31: 0.2368 S32: -0.4917 S33: -0.1839 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|69 - 79} REMARK 3 ORIGIN FOR THE GROUP (A): -36.2196 6.2677 31.0061 REMARK 3 T TENSOR REMARK 3 T11: 0.0885 T22: -0.0508 REMARK 3 T33: -0.0516 T12: -0.0720 REMARK 3 T13: -0.0204 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 1.7346 L22: 2.2077 REMARK 3 L33: 5.1837 L12: 1.2993 REMARK 3 L13: 2.4027 L23: 0.0562 REMARK 3 S TENSOR REMARK 3 S11: 0.3792 S12: -0.1575 S13: -0.0877 REMARK 3 S21: 0.1885 S22: -0.1550 S23: 0.0833 REMARK 3 S31: 0.2401 S32: -0.2334 S33: -0.2243 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|80 - 92} REMARK 3 ORIGIN FOR THE GROUP (A): -29.7041 18.3300 28.5866 REMARK 3 T TENSOR REMARK 3 T11: 0.0571 T22: -0.0013 REMARK 3 T33: -0.0370 T12: -0.0437 REMARK 3 T13: -0.0102 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 0.4121 L22: 2.5119 REMARK 3 L33: 2.5980 L12: 0.6972 REMARK 3 L13: 0.7882 L23: -2.5065 REMARK 3 S TENSOR REMARK 3 S11: 0.1346 S12: 0.0090 S13: 0.0738 REMARK 3 S21: 0.2238 S22: -0.0980 S23: 0.0435 REMARK 3 S31: -0.1551 S32: -0.0710 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|93 - 101} REMARK 3 ORIGIN FOR THE GROUP (A): -22.1423 21.7332 33.0111 REMARK 3 T TENSOR REMARK 3 T11: 0.0607 T22: 0.0244 REMARK 3 T33: -0.0724 T12: -0.1062 REMARK 3 T13: -0.0484 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.0735 L22: 3.8686 REMARK 3 L33: 5.1348 L12: -0.5321 REMARK 3 L13: 3.6066 L23: -0.4259 REMARK 3 S TENSOR REMARK 3 S11: 0.1243 S12: 0.0219 S13: 0.0962 REMARK 3 S21: 0.3145 S22: -0.2094 S23: -0.1410 REMARK 3 S31: -0.1880 S32: -0.1528 S33: 0.0851 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|102 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): -23.6311 9.8551 30.9154 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: -0.0203 REMARK 3 T33: -0.0154 T12: -0.0140 REMARK 3 T13: -0.0528 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 0.9015 L22: 3.5466 REMARK 3 L33: 1.7212 L12: 1.9892 REMARK 3 L13: 0.6444 L23: 1.0028 REMARK 3 S TENSOR REMARK 3 S11: 0.1968 S12: -0.0546 S13: -0.2464 REMARK 3 S21: 0.1596 S22: -0.2274 S23: -0.2629 REMARK 3 S31: 0.2291 S32: 0.0788 S33: 0.0306 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {A|115 - 129} REMARK 3 ORIGIN FOR THE GROUP (A): -13.6367 13.5017 31.2195 REMARK 3 T TENSOR REMARK 3 T11: -0.0336 T22: -0.0434 REMARK 3 T33: 0.0820 T12: -0.0022 REMARK 3 T13: -0.0986 T23: 0.0911 REMARK 3 L TENSOR REMARK 3 L11: 3.8407 L22: 5.5260 REMARK 3 L33: 5.4630 L12: 2.1342 REMARK 3 L13: 3.0638 L23: 0.5141 REMARK 3 S TENSOR REMARK 3 S11: 0.0196 S12: 0.2997 S13: -0.1992 REMARK 3 S21: 0.2177 S22: -0.1727 S23: -0.7435 REMARK 3 S31: 0.0575 S32: 0.1843 S33: 0.1531 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Q7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292119155. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.14 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21275 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 19.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 23.10 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 24.40 REMARK 200 R MERGE FOR SHELL (I) : 2.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 MICROLITER OF BCL6-BTB AT 10 MG/ML REMARK 280 PLUS 1.5 MICROLITER OF A CRYSTALLISATION SOLUTION CONSISTING OF REMARK 280 0.1 M TRIS PH 7.5 AND 0.80 M NA/K TARTRATE, AGAINST 300 REMARK 280 MICROLITER OF CRYSTALLISATION SOLUTION., VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.60233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.20467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.40350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 139.00583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.80117 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.60233 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 111.20467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 139.00583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.40350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.80117 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -33.65350 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 58.28957 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.80117 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -14 REMARK 465 PRO A -13 REMARK 465 GLY A -12 REMARK 465 LEU A -11 REMARK 465 ASP A -10 REMARK 465 TYR A -9 REMARK 465 LYS A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 GLU A -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 6 OD2 REMARK 470 GLN A 64 CD OE1 NE2 REMARK 470 ARG A 98 NE CZ NH1 NH2 REMARK 470 GLU A 99 CD OE1 OE2 REMARK 470 LYS A 123 NZ REMARK 470 LYS A 126 CD CE NZ REMARK 470 GLU A 129 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -124.86 58.50 REMARK 500 SER A 93 -0.57 79.05 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Q7V A 5 129 UNP P41182 BCL6_HUMAN 5 129 SEQADV 7Q7V GLY A -14 UNP P41182 EXPRESSION TAG SEQADV 7Q7V PRO A -13 UNP P41182 EXPRESSION TAG SEQADV 7Q7V GLY A -12 UNP P41182 EXPRESSION TAG SEQADV 7Q7V LEU A -11 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASP A -10 UNP P41182 EXPRESSION TAG SEQADV 7Q7V TYR A -9 UNP P41182 EXPRESSION TAG SEQADV 7Q7V LYS A -8 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASP A -7 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASP A -6 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASP A -5 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASP A -4 UNP P41182 EXPRESSION TAG SEQADV 7Q7V LYS A -3 UNP P41182 EXPRESSION TAG SEQADV 7Q7V GLU A -2 UNP P41182 EXPRESSION TAG SEQADV 7Q7V ASN A -1 UNP P41182 EXPRESSION TAG SEQADV 7Q7V LEU A 0 UNP P41182 EXPRESSION TAG SEQADV 7Q7V TYR A 1 UNP P41182 EXPRESSION TAG SEQADV 7Q7V PHE A 2 UNP P41182 EXPRESSION TAG SEQADV 7Q7V GLN A 3 UNP P41182 EXPRESSION TAG SEQADV 7Q7V GLY A 4 UNP P41182 EXPRESSION TAG SEQRES 1 A 144 GLY PRO GLY LEU ASP TYR LYS ASP ASP ASP ASP LYS GLU SEQRES 2 A 144 ASN LEU TYR PHE GLN GLY ALA ASP SER CYS ILE GLN PHE SEQRES 3 A 144 THR ARG HIS ALA SER ASP VAL LEU LEU ASN LEU ASN ARG SEQRES 4 A 144 LEU ARG SER ARG ASP ILE LEU THR ASP VAL VAL ILE VAL SEQRES 5 A 144 VAL SER ARG GLU GLN PHE ARG ALA HIS LYS THR VAL LEU SEQRES 6 A 144 MET ALA CYS SER GLY LEU PHE TYR SER ILE PHE THR ASP SEQRES 7 A 144 GLN LEU LYS CYS ASN LEU SER VAL ILE ASN LEU ASP PRO SEQRES 8 A 144 GLU ILE ASN PRO GLU GLY PHE CYS ILE LEU LEU ASP PHE SEQRES 9 A 144 MET TYR THR SER ARG LEU ASN LEU ARG GLU GLY ASN ILE SEQRES 10 A 144 MET ALA VAL MET ALA THR ALA MET TYR LEU GLN MET GLU SEQRES 11 A 144 HIS VAL VAL ASP THR CYS ARG LYS PHE ILE LYS ALA SER SEQRES 12 A 144 GLU HET 9GR A 201 30 HET EDO A 202 4 HET EDO A 203 4 HET DMS A 204 4 HETNAM 9GR 2-CHLORANYL-4-[[(2R)-2-CYCLOPROPYL-7-METHYL-6- HETNAM 2 9GR OXIDANYLIDENE-1,2,3,4-TETRAHYDRO-[1,4]OXAZEPINO[2,3- HETNAM 3 9GR C]QUINOLIN-10-YL]AMINO]PYRIDINE-3-CARBONITRILE HETNAM EDO 1,2-ETHANEDIOL HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 9GR C22 H20 CL N5 O2 FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 DMS C2 H6 O S FORMUL 6 HOH *92(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 CYS A 53 1 8 HELIX 3 AA3 SER A 54 THR A 62 1 9 HELIX 4 AA4 LEU A 65 LEU A 69 5 5 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 GLN A 113 1 13 HELIX 7 AA7 MET A 114 GLU A 129 1 16 SHEET 1 AA1 2 TYR A 1 GLN A 3 0 SHEET 2 AA1 2 ILE A 9 PHE A 11 -1 O GLN A 10 N PHE A 2 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 CRYST1 67.307 67.307 166.807 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014857 0.008578 0.000000 0.00000 SCALE2 0.000000 0.017156 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005995 0.00000