data_7Q81 # _entry.id 7Q81 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Q81 pdb_00007q81 10.2210/pdb7q81/pdb WWPDB D_1292118337 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-03-23 2 'Structure model' 1 1 2022-03-30 3 'Structure model' 1 2 2022-05-11 4 'Structure model' 1 3 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.name' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Q81 _pdbx_database_status.recvd_initial_deposition_date 2021-11-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 7Q7X _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email claudia.hoebartner@uni-wuerzburg.de _pdbx_contact_author.name_first Hoebartner _pdbx_contact_author.name_last Claudia _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4548-2299 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mieczkowski, M.' 1 ? 'Hoebartner, C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 18 _citation.language ? _citation.page_first 547 _citation.page_last 555 _citation.title 'Structure and mechanism of the methyltransferase ribozyme MTR1.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-022-00976-x _citation.pdbx_database_id_PubMed 35301481 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Scheitl, C.P.M.' 1 ? primary 'Mieczkowski, M.' 2 ? primary 'Schindelin, H.' 3 ? primary 'Hobartner, C.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn RNA1 4514.681 1 ? ? ? ? 2 polymer syn 'RNA 2' 7641.636 1 ? ? ? ? 3 polymer syn 'RNA 3' 7755.703 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 5 ? ? ? ? 5 non-polymer syn GUANINE 151.126 1 ? ? ? ? 6 water nat water 18.015 18 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'CCACUG(1MA)GAGU(UMS)UC' CCACUGAGAGUUUC A ? 2 polyribonucleotide no no GGAAGCUCUGACCGACCCCCAGCC GGAAGCUCUGACCGACCCCCAGCC B ? 3 polyribonucleotide no no GCUGGGACAACUAGACAUACAGUG GCUGGGACAACUAGACAUACAGUG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 GUANINE GUN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 C n 1 3 A n 1 4 C n 1 5 U n 1 6 G n 1 7 1MA n 1 8 G n 1 9 A n 1 10 G n 1 11 U n 1 12 UMS n 1 13 U n 1 14 C n 2 1 G n 2 2 G n 2 3 A n 2 4 A n 2 5 G n 2 6 C n 2 7 U n 2 8 C n 2 9 U n 2 10 G n 2 11 A n 2 12 C n 2 13 C n 2 14 G n 2 15 A n 2 16 C n 2 17 C n 2 18 C n 2 19 C n 2 20 C n 2 21 A n 2 22 G n 2 23 C n 2 24 C n 3 1 G n 3 2 C n 3 3 U n 3 4 G n 3 5 G n 3 6 G n 3 7 A n 3 8 C n 3 9 A n 3 10 A n 3 11 C n 3 12 U n 3 13 A n 3 14 G n 3 15 A n 3 16 C n 3 17 A n 3 18 U n 3 19 A n 3 20 C n 3 21 A n 3 22 G n 3 23 U n 3 24 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 14 'synthetic construct' ? 32630 ? 2 1 sample 1 24 'synthetic construct' ? 32630 ? 3 1 sample 1 24 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1MA 'RNA linking' n "6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GUN non-polymer . GUANINE ? 'C5 H5 N5 O' 151.126 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 UMS 'DNA linking' n "2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE" ? 'C10 H15 N2 O8 P Se' 401.168 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C A . n A 1 2 C 2 2 2 C C A . n A 1 3 A 3 3 3 A A A . n A 1 4 C 4 4 4 C C A . n A 1 5 U 5 5 5 U U A . n A 1 6 G 6 6 6 G G A . n A 1 7 1MA 7 7 7 1MA 1MA A . n A 1 8 G 8 8 8 G G A . n A 1 9 A 9 9 9 A A A . n A 1 10 G 10 10 10 G G A . n A 1 11 U 11 11 11 U U A . n A 1 12 UMS 12 12 12 UMS UMS A . n A 1 13 U 13 13 13 U U A . n A 1 14 C 14 14 14 C C A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 A 3 3 3 A A B . n B 2 4 A 4 4 4 A A B . n B 2 5 G 5 5 5 G G B . n B 2 6 C 6 6 6 C C B . n B 2 7 U 7 7 7 U U B . n B 2 8 C 8 8 8 C C B . n B 2 9 U 9 9 9 U U B . n B 2 10 G 10 10 10 G G B . n B 2 11 A 11 11 11 A A B . n B 2 12 C 12 12 12 C C B . n B 2 13 C 13 13 13 C C B . n B 2 14 G 14 14 14 G G B . n B 2 15 A 15 15 15 A A B . n B 2 16 C 16 16 16 C C B . n B 2 17 C 17 17 17 C C B . n B 2 18 C 18 18 18 C C B . n B 2 19 C 19 19 19 C C B . n B 2 20 C 20 20 20 C C B . n B 2 21 A 21 21 21 A A B . n B 2 22 G 22 22 22 G G B . n B 2 23 C 23 23 23 C C B . n B 2 24 C 24 24 24 C C B . n C 3 1 G 1 25 25 G G C . n C 3 2 C 2 26 26 C C C . n C 3 3 U 3 27 27 U U C . n C 3 4 G 4 28 28 G G C . n C 3 5 G 5 29 29 G G C . n C 3 6 G 6 30 30 G G C . n C 3 7 A 7 31 31 A A C . n C 3 8 C 8 32 32 C C C . n C 3 9 A 9 33 33 A A C . n C 3 10 A 10 34 34 A A C . n C 3 11 C 11 35 35 C C C . n C 3 12 U 12 36 36 U U C . n C 3 13 A 13 37 37 A A C . n C 3 14 G 14 38 38 G G C . n C 3 15 A 15 39 39 A A C . n C 3 16 C 16 40 40 C C C . n C 3 17 A 17 41 41 A A C . n C 3 18 U 18 42 42 U U C . n C 3 19 A 19 43 43 A A C . n C 3 20 C 20 44 44 C C C . n C 3 21 A 21 45 45 A A C . n C 3 22 G 22 46 46 G G C . n C 3 23 U 23 47 47 U U C . n C 3 24 G 24 48 48 G G C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 101 1 MG MO6 B . E 4 MG 1 102 3 MG MO6 B . F 5 GUN 1 101 1 GUN GUN C . G 4 MG 1 102 1 MG MG C . H 4 MG 1 103 2 MG MG C . I 4 MG 1 104 2 MG MO6 C . J 6 HOH 1 201 3 HOH MO6 B . J 6 HOH 2 202 2 HOH MO6 B . J 6 HOH 3 203 1 HOH MO6 B . J 6 HOH 4 204 3 HOH MO6 B . J 6 HOH 5 205 1 HOH MO6 B . J 6 HOH 6 206 2 HOH MO6 B . J 6 HOH 7 207 2 HOH MO6 B . J 6 HOH 8 208 1 HOH MO6 B . J 6 HOH 9 209 1 HOH MO6 B . J 6 HOH 10 210 1 HOH MO6 B . K 6 HOH 1 201 2 HOH MO6 C . K 6 HOH 2 202 2 HOH MO6 C . K 6 HOH 3 203 3 HOH MO6 C . K 6 HOH 4 204 2 HOH MO6 C . K 6 HOH 5 205 3 HOH MO6 C . K 6 HOH 6 206 3 HOH MO6 C . K 6 HOH 7 207 1 HOH MO6 C . K 6 HOH 8 208 3 HOH MO6 C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.19.1_4122: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7Q81 _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.085 _cell.length_a_esd ? _cell.length_b 71.085 _cell.length_b_esd ? _cell.length_c 83.561 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Q81 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '36-42% MPD, 50mM MES pH 6.4-6.7, 100mM NaCl, 100mM LiCl, 10mM MgCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-02-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator M _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9786 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7Q81 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.85 _reflns.d_resolution_low 43.07 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5365 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 24.5 _reflns.pdbx_Rmerge_I_obs 0.0685 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.07 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 2.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.38 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 515 _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.693 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Q81 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.85 _refine.ls_d_res_low 43.07 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5365 _refine.ls_number_reflns_R_free 456 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 4.78 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1890 _refine.ls_R_factor_R_free 0.2136 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1877 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7Q7X _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.50 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.29 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 43.07 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1347 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1313 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.001 ? 1496 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.287 ? 2341 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 9.792 ? 716 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.016 ? 305 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.001 ? 63 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.85 3.26 . . 154 3021 100.00 . . . 0.3007 . 0.3063 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.26 4.11 . . 149 3026 100.00 . . . 0.2752 . 0.2441 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.11 36.02 . . 153 3038 100.00 . . . 0.1861 . 0.1571 . . . . . . . . . . . # _struct.entry_id 7Q81 _struct.title ;Crystal structure of the methyltransferase-ribozyme 1, 2'-Selenomethyl-Uridine modified (with 1-methyl-adenosine) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Q81 _struct_keywords.text 'MTR1, methyltransferase ribozyme, ribozyme, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 6 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7Q81 7Q81 ? 1 ? 1 2 PDB 7Q81 7Q81 ? 2 ? 1 3 PDB 7Q81 7Q81 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Q81 A 1 ? 14 ? 7Q81 1 ? 14 ? 1 14 2 2 7Q81 B 1 ? 24 ? 7Q81 1 ? 24 ? 1 24 3 3 7Q81 C 1 ? 24 ? 7Q81 25 ? 48 ? 25 48 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5840 ? 1 MORE -29 ? 1 'SSA (A^2)' 10160 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 6 "O3'" ? ? ? 1_555 A 1MA 7 P ? ? A G 6 A 1MA 7 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? A 1MA 7 "O3'" ? ? ? 1_555 A G 8 P ? ? A 1MA 7 A G 8 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? A U 11 "O3'" ? ? ? 1_555 A UMS 12 P ? ? A U 11 A UMS 12 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale both ? A UMS 12 "O3'" ? ? ? 1_555 A U 13 P ? ? A UMS 12 A U 13 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 203 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 205 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 208 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 209 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 210 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 101 C HOH 207 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 102 B HOH 201 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 102 B HOH 204 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 102 C HOH 203 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 102 C HOH 205 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 102 C HOH 206 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 102 C HOH 208 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc13 metalc ? ? J HOH . O ? ? ? 1_555 I MG . MG ? ? B HOH 202 C MG 104 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc14 metalc ? ? J HOH . O ? ? ? 1_555 I MG . MG ? ? B HOH 206 C MG 104 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc15 metalc ? ? J HOH . O ? ? ? 1_555 I MG . MG ? ? B HOH 207 C MG 104 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc16 metalc ? ? C C 8 O2 ? ? ? 1_555 G MG . MG ? ? C C 32 C MG 102 1_555 ? ? ? ? ? ? ? 2.388 ? ? metalc17 metalc ? ? C U 23 O4 ? ? ? 1_555 H MG . MG ? ? C U 47 C MG 103 1_555 ? ? ? ? ? ? ? 2.602 ? ? metalc18 metalc ? ? C G 24 O6 ? ? ? 1_555 H MG . MG ? ? C G 48 C MG 103 1_555 ? ? ? ? ? ? ? 2.553 ? ? metalc19 metalc ? ? I MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 104 C HOH 201 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc20 metalc ? ? I MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 104 C HOH 202 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc21 metalc ? ? I MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 104 C HOH 204 1_555 ? ? ? ? ? ? ? 2.180 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 C G 24 N1 ? ? A C 2 C G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 C G 24 O6 ? ? A C 2 C G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 C G 24 N2 ? ? A C 2 C G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 3 N1 ? ? ? 1_555 C U 23 N3 ? ? A A 3 C U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 3 N6 ? ? ? 1_555 C U 23 O4 ? ? A A 3 C U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 4 N3 ? ? ? 1_555 C G 22 N1 ? ? A C 4 C G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N4 ? ? ? 1_555 C G 22 O6 ? ? A C 4 C G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 O2 ? ? ? 1_555 C G 22 N2 ? ? A C 4 C G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 5 N3 ? ? ? 1_555 C A 21 N1 ? ? A U 5 C A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 5 O4 ? ? ? 1_555 C A 21 N6 ? ? A U 5 C A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 6 N1 ? ? ? 1_555 C C 20 N3 ? ? A G 6 C C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 6 N2 ? ? ? 1_555 C C 20 O2 ? ? A G 6 C C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 O6 ? ? ? 1_555 C C 20 N4 ? ? A G 6 C C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 8 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 8 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 8 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 9 N1 ? ? ? 1_555 B U 7 N3 ? ? A A 9 B U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 9 N6 ? ? ? 1_555 B U 7 O4 ? ? A A 9 B U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 10 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 10 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 10 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 11 O4 ? ? ? 1_555 B G 5 N1 ? ? A U 11 B G 5 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog23 hydrog ? ? A UMS 12 N3 ? ? ? 1_555 B A 4 N1 ? ? A UMS 12 B A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A UMS 12 O4 ? ? ? 1_555 B A 4 N6 ? ? A UMS 12 B A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 13 N3 ? ? ? 1_555 B A 3 N1 ? ? A U 13 B A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 13 O4 ? ? ? 1_555 B A 3 N6 ? ? A U 13 B A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 14 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 14 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 14 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 14 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 14 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 14 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B U 9 N3 ? ? ? 1_555 C A 10 N7 ? ? B U 9 C A 34 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog31 hydrog ? ? B U 9 O2 ? ? ? 1_555 C A 10 N6 ? ? B U 9 C A 34 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog32 hydrog ? ? B A 11 N6 ? ? ? 1_555 C A 19 N3 ? ? B A 11 C A 43 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog33 hydrog ? ? B C 13 N3 ? ? ? 1_555 C G 14 N1 ? ? B C 13 C G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B C 13 N4 ? ? ? 1_555 C G 14 O6 ? ? B C 13 C G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B C 13 O2 ? ? ? 1_555 C G 14 N2 ? ? B C 13 C G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B C 13 O2 ? ? ? 1_555 C A 17 N6 ? ? B C 13 C A 41 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog37 hydrog ? ? B G 14 N1 ? ? ? 1_555 C C 11 N3 ? ? B G 14 C C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 14 N2 ? ? ? 1_555 C C 11 O2 ? ? B G 14 C C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 14 O6 ? ? ? 1_555 C C 11 N4 ? ? B G 14 C C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B C 17 N4 ? ? ? 1_555 C A 7 N1 ? ? B C 17 C A 31 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog41 hydrog ? ? B C 18 N3 ? ? ? 1_555 C G 6 N1 ? ? B C 18 C G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 18 N4 ? ? ? 1_555 C G 6 O6 ? ? B C 18 C G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B C 18 O2 ? ? ? 1_555 C G 6 N2 ? ? B C 18 C G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B C 19 N3 ? ? ? 1_555 C G 5 N1 ? ? B C 19 C G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B C 19 N4 ? ? ? 1_555 C G 5 O6 ? ? B C 19 C G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B C 19 O2 ? ? ? 1_555 C G 5 N2 ? ? B C 19 C G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 20 N3 ? ? ? 1_555 C G 4 N1 ? ? B C 20 C G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 20 N4 ? ? ? 1_555 C G 4 O6 ? ? B C 20 C G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B C 20 O2 ? ? ? 1_555 C G 4 N2 ? ? B C 20 C G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B A 21 N1 ? ? ? 1_555 C U 3 N3 ? ? B A 21 C U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B A 21 N6 ? ? ? 1_555 C U 3 O4 ? ? B A 21 C U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B G 22 N1 ? ? ? 1_555 C C 2 N3 ? ? B G 22 C C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 22 N2 ? ? ? 1_555 C C 2 O2 ? ? B G 22 C C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 22 O6 ? ? ? 1_555 C C 2 N4 ? ? B G 22 C C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 23 N3 ? ? ? 1_555 C G 1 N1 ? ? B C 23 C G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 23 N4 ? ? ? 1_555 C G 1 O6 ? ? B C 23 C G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 23 O2 ? ? ? 1_555 C G 1 N2 ? ? B C 23 C G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? J HOH . ? B HOH 203 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 205 ? 1_555 90.2 ? 2 O ? J HOH . ? B HOH 203 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 208 ? 1_555 90.1 ? 3 O ? J HOH . ? B HOH 205 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 208 ? 1_555 90.0 ? 4 O ? J HOH . ? B HOH 203 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 209 ? 1_555 90.0 ? 5 O ? J HOH . ? B HOH 205 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 209 ? 1_555 90.0 ? 6 O ? J HOH . ? B HOH 208 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 209 ? 1_555 180.0 ? 7 O ? J HOH . ? B HOH 203 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 210 ? 1_555 179.9 ? 8 O ? J HOH . ? B HOH 205 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 210 ? 1_555 89.9 ? 9 O ? J HOH . ? B HOH 208 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 210 ? 1_555 89.9 ? 10 O ? J HOH . ? B HOH 209 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 210 ? 1_555 90.0 ? 11 O ? J HOH . ? B HOH 203 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? K HOH . ? C HOH 207 ? 1_555 89.8 ? 12 O ? J HOH . ? B HOH 205 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? K HOH . ? C HOH 207 ? 1_555 179.9 ? 13 O ? J HOH . ? B HOH 208 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? K HOH . ? C HOH 207 ? 1_555 90.0 ? 14 O ? J HOH . ? B HOH 209 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? K HOH . ? C HOH 207 ? 1_555 90.0 ? 15 O ? J HOH . ? B HOH 210 ? 1_555 MG ? D MG . ? B MG 101 ? 1_555 O ? K HOH . ? C HOH 207 ? 1_555 90.0 ? 16 O ? J HOH . ? B HOH 201 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 204 ? 1_555 89.9 ? 17 O ? J HOH . ? B HOH 201 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 203 ? 1_555 90.0 ? 18 O ? J HOH . ? B HOH 204 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 203 ? 1_555 90.0 ? 19 O ? J HOH . ? B HOH 201 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 205 ? 1_555 90.1 ? 20 O ? J HOH . ? B HOH 204 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 205 ? 1_555 179.9 ? 21 O ? K HOH . ? C HOH 203 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 205 ? 1_555 90.0 ? 22 O ? J HOH . ? B HOH 201 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 206 ? 1_555 179.9 ? 23 O ? J HOH . ? B HOH 204 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 206 ? 1_555 90.0 ? 24 O ? K HOH . ? C HOH 203 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 206 ? 1_555 90.1 ? 25 O ? K HOH . ? C HOH 205 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 206 ? 1_555 89.9 ? 26 O ? J HOH . ? B HOH 201 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 208 ? 1_555 89.9 ? 27 O ? J HOH . ? B HOH 204 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 208 ? 1_555 90.0 ? 28 O ? K HOH . ? C HOH 203 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 208 ? 1_555 179.9 ? 29 O ? K HOH . ? C HOH 205 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 208 ? 1_555 90.0 ? 30 O ? K HOH . ? C HOH 206 ? 1_555 MG ? E MG . ? B MG 102 ? 1_555 O ? K HOH . ? C HOH 208 ? 1_555 90.0 ? 31 O ? J HOH . ? B HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? J HOH . ? B HOH 206 ? 1_555 90.0 ? 32 O ? J HOH . ? B HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 90.0 ? 33 O ? J HOH . ? B HOH 206 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? J HOH . ? B HOH 207 ? 1_555 89.9 ? 34 O ? J HOH . ? B HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 201 ? 1_555 90.1 ? 35 O ? J HOH . ? B HOH 206 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 201 ? 1_555 179.9 ? 36 O ? J HOH . ? B HOH 207 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 201 ? 1_555 90.0 ? 37 O ? J HOH . ? B HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 202 ? 1_555 179.9 ? 38 O ? J HOH . ? B HOH 206 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 202 ? 1_555 90.2 ? 39 O ? J HOH . ? B HOH 207 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 202 ? 1_555 90.0 ? 40 O ? K HOH . ? C HOH 201 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 202 ? 1_555 89.8 ? 41 O ? J HOH . ? B HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 204 ? 1_555 90.2 ? 42 O ? J HOH . ? B HOH 206 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 204 ? 1_555 90.0 ? 43 O ? J HOH . ? B HOH 207 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 204 ? 1_555 179.8 ? 44 O ? K HOH . ? C HOH 201 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 204 ? 1_555 90.1 ? 45 O ? K HOH . ? C HOH 202 ? 1_555 MG ? I MG . ? C MG 104 ? 1_555 O ? K HOH . ? C HOH 204 ? 1_555 89.8 ? 46 O4 ? C U 23 ? C U 47 ? 1_555 MG ? H MG . ? C MG 103 ? 1_555 O6 ? C G 24 ? C G 48 ? 1_555 70.2 ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 45.3464 _pdbx_refine_tls.origin_y 12.9391 _pdbx_refine_tls.origin_z 42.3798 _pdbx_refine_tls.T[1][1] 0.7607 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0072 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0461 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.9115 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0714 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.6746 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.7948 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 3.5926 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -2.2389 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 6.0191 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -2.2350 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.8256 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.4952 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.3426 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0005 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.1117 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.6062 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.1750 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0333 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.6551 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0674 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_entry_details.entry_id 7Q81 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1MA P P N N 1 1MA OP1 O N N 2 1MA OP2 O N N 3 1MA OP3 O N N 4 1MA "O5'" O N N 5 1MA "C5'" C N N 6 1MA "C4'" C N R 7 1MA "O4'" O N N 8 1MA "C3'" C N S 9 1MA "O3'" O N N 10 1MA "C2'" C N R 11 1MA "O2'" O N N 12 1MA "C1'" C N R 13 1MA N9 N Y N 14 1MA C8 C Y N 15 1MA N7 N Y N 16 1MA C5 C Y N 17 1MA C6 C N N 18 1MA N6 N N N 19 1MA N1 N N N 20 1MA CM1 C N N 21 1MA C2 C N N 22 1MA N3 N N N 23 1MA C4 C Y N 24 1MA HOP2 H N N 25 1MA HOP3 H N N 26 1MA "H5'" H N N 27 1MA "H5''" H N N 28 1MA "H4'" H N N 29 1MA "H3'" H N N 30 1MA "HO3'" H N N 31 1MA "H2'" H N N 32 1MA "HO2'" H N N 33 1MA "H1'" H N N 34 1MA H8 H N N 35 1MA HN61 H N N 36 1MA HM11 H N N 37 1MA HM12 H N N 38 1MA HM13 H N N 39 1MA H2 H N N 40 A OP3 O N N 41 A P P N N 42 A OP1 O N N 43 A OP2 O N N 44 A "O5'" O N N 45 A "C5'" C N N 46 A "C4'" C N R 47 A "O4'" O N N 48 A "C3'" C N S 49 A "O3'" O N N 50 A "C2'" C N R 51 A "O2'" O N N 52 A "C1'" C N R 53 A N9 N Y N 54 A C8 C Y N 55 A N7 N Y N 56 A C5 C Y N 57 A C6 C Y N 58 A N6 N N N 59 A N1 N Y N 60 A C2 C Y N 61 A N3 N Y N 62 A C4 C Y N 63 A HOP3 H N N 64 A HOP2 H N N 65 A "H5'" H N N 66 A "H5''" H N N 67 A "H4'" H N N 68 A "H3'" H N N 69 A "HO3'" H N N 70 A "H2'" H N N 71 A "HO2'" H N N 72 A "H1'" H N N 73 A H8 H N N 74 A H61 H N N 75 A H62 H N N 76 A H2 H N N 77 C OP3 O N N 78 C P P N N 79 C OP1 O N N 80 C OP2 O N N 81 C "O5'" O N N 82 C "C5'" C N N 83 C "C4'" C N R 84 C "O4'" O N N 85 C "C3'" C N S 86 C "O3'" O N N 87 C "C2'" C N R 88 C "O2'" O N N 89 C "C1'" C N R 90 C N1 N N N 91 C C2 C N N 92 C O2 O N N 93 C N3 N N N 94 C C4 C N N 95 C N4 N N N 96 C C5 C N N 97 C C6 C N N 98 C HOP3 H N N 99 C HOP2 H N N 100 C "H5'" H N N 101 C "H5''" H N N 102 C "H4'" H N N 103 C "H3'" H N N 104 C "HO3'" H N N 105 C "H2'" H N N 106 C "HO2'" H N N 107 C "H1'" H N N 108 C H41 H N N 109 C H42 H N N 110 C H5 H N N 111 C H6 H N N 112 G OP3 O N N 113 G P P N N 114 G OP1 O N N 115 G OP2 O N N 116 G "O5'" O N N 117 G "C5'" C N N 118 G "C4'" C N R 119 G "O4'" O N N 120 G "C3'" C N S 121 G "O3'" O N N 122 G "C2'" C N R 123 G "O2'" O N N 124 G "C1'" C N R 125 G N9 N Y N 126 G C8 C Y N 127 G N7 N Y N 128 G C5 C Y N 129 G C6 C N N 130 G O6 O N N 131 G N1 N N N 132 G C2 C N N 133 G N2 N N N 134 G N3 N N N 135 G C4 C Y N 136 G HOP3 H N N 137 G HOP2 H N N 138 G "H5'" H N N 139 G "H5''" H N N 140 G "H4'" H N N 141 G "H3'" H N N 142 G "HO3'" H N N 143 G "H2'" H N N 144 G "HO2'" H N N 145 G "H1'" H N N 146 G H8 H N N 147 G H1 H N N 148 G H21 H N N 149 G H22 H N N 150 GUN N9 N Y N 151 GUN C8 C Y N 152 GUN N7 N Y N 153 GUN C5 C Y N 154 GUN C6 C N N 155 GUN O6 O N N 156 GUN N1 N N N 157 GUN C2 C N N 158 GUN N2 N N N 159 GUN N3 N N N 160 GUN C4 C Y N 161 GUN HN9 H N N 162 GUN H8 H N N 163 GUN HN1 H N N 164 GUN HN21 H N N 165 GUN HN22 H N N 166 HOH O O N N 167 HOH H1 H N N 168 HOH H2 H N N 169 MG MG MG N N 170 U OP3 O N N 171 U P P N N 172 U OP1 O N N 173 U OP2 O N N 174 U "O5'" O N N 175 U "C5'" C N N 176 U "C4'" C N R 177 U "O4'" O N N 178 U "C3'" C N S 179 U "O3'" O N N 180 U "C2'" C N R 181 U "O2'" O N N 182 U "C1'" C N R 183 U N1 N N N 184 U C2 C N N 185 U O2 O N N 186 U N3 N N N 187 U C4 C N N 188 U O4 O N N 189 U C5 C N N 190 U C6 C N N 191 U HOP3 H N N 192 U HOP2 H N N 193 U "H5'" H N N 194 U "H5''" H N N 195 U "H4'" H N N 196 U "H3'" H N N 197 U "HO3'" H N N 198 U "H2'" H N N 199 U "HO2'" H N N 200 U "H1'" H N N 201 U H3 H N N 202 U H5 H N N 203 U H6 H N N 204 UMS OP3 O N N 205 UMS P P N N 206 UMS OP1 O N N 207 UMS OP2 O N N 208 UMS "O5'" O N N 209 UMS "C5'" C N N 210 UMS "C4'" C N R 211 UMS "O4'" O N N 212 UMS "C3'" C N R 213 UMS "O3'" O N N 214 UMS "C2'" C N R 215 UMS "SE2'" SE N N 216 UMS "C1'" C N R 217 UMS "CA'" C N N 218 UMS N1 N N N 219 UMS C2 C N N 220 UMS O2 O N N 221 UMS N3 N N N 222 UMS C4 C N N 223 UMS O4 O N N 224 UMS C5 C N N 225 UMS C6 C N N 226 UMS HOP3 H N N 227 UMS HOP2 H N N 228 UMS "H5'" H N N 229 UMS "H5'2" H N N 230 UMS "H4'" H N N 231 UMS "H3'" H N N 232 UMS "HO3'" H N N 233 UMS "H2'" H N N 234 UMS "H1'" H N N 235 UMS "HA'" H N N 236 UMS "HA'2" H N N 237 UMS "HA'3" H N N 238 UMS H3 H N N 239 UMS H5 H N N 240 UMS H6 H N N 241 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1MA P OP1 doub N N 1 1MA P OP2 sing N N 2 1MA P OP3 sing N N 3 1MA P "O5'" sing N N 4 1MA OP2 HOP2 sing N N 5 1MA OP3 HOP3 sing N N 6 1MA "O5'" "C5'" sing N N 7 1MA "C5'" "C4'" sing N N 8 1MA "C5'" "H5'" sing N N 9 1MA "C5'" "H5''" sing N N 10 1MA "C4'" "O4'" sing N N 11 1MA "C4'" "C3'" sing N N 12 1MA "C4'" "H4'" sing N N 13 1MA "O4'" "C1'" sing N N 14 1MA "C3'" "O3'" sing N N 15 1MA "C3'" "C2'" sing N N 16 1MA "C3'" "H3'" sing N N 17 1MA "O3'" "HO3'" sing N N 18 1MA "C2'" "O2'" sing N N 19 1MA "C2'" "C1'" sing N N 20 1MA "C2'" "H2'" sing N N 21 1MA "O2'" "HO2'" sing N N 22 1MA "C1'" N9 sing N N 23 1MA "C1'" "H1'" sing N N 24 1MA N9 C8 sing Y N 25 1MA N9 C4 sing Y N 26 1MA C8 N7 doub Y N 27 1MA C8 H8 sing N N 28 1MA N7 C5 sing Y N 29 1MA C5 C6 sing N N 30 1MA C5 C4 doub Y N 31 1MA C6 N6 doub N N 32 1MA C6 N1 sing N N 33 1MA N6 HN61 sing N N 34 1MA N1 CM1 sing N N 35 1MA N1 C2 sing N N 36 1MA CM1 HM11 sing N N 37 1MA CM1 HM12 sing N N 38 1MA CM1 HM13 sing N N 39 1MA C2 N3 doub N N 40 1MA C2 H2 sing N N 41 1MA N3 C4 sing N N 42 A OP3 P sing N N 43 A OP3 HOP3 sing N N 44 A P OP1 doub N N 45 A P OP2 sing N N 46 A P "O5'" sing N N 47 A OP2 HOP2 sing N N 48 A "O5'" "C5'" sing N N 49 A "C5'" "C4'" sing N N 50 A "C5'" "H5'" sing N N 51 A "C5'" "H5''" sing N N 52 A "C4'" "O4'" sing N N 53 A "C4'" "C3'" sing N N 54 A "C4'" "H4'" sing N N 55 A "O4'" "C1'" sing N N 56 A "C3'" "O3'" sing N N 57 A "C3'" "C2'" sing N N 58 A "C3'" "H3'" sing N N 59 A "O3'" "HO3'" sing N N 60 A "C2'" "O2'" sing N N 61 A "C2'" "C1'" sing N N 62 A "C2'" "H2'" sing N N 63 A "O2'" "HO2'" sing N N 64 A "C1'" N9 sing N N 65 A "C1'" "H1'" sing N N 66 A N9 C8 sing Y N 67 A N9 C4 sing Y N 68 A C8 N7 doub Y N 69 A C8 H8 sing N N 70 A N7 C5 sing Y N 71 A C5 C6 sing Y N 72 A C5 C4 doub Y N 73 A C6 N6 sing N N 74 A C6 N1 doub Y N 75 A N6 H61 sing N N 76 A N6 H62 sing N N 77 A N1 C2 sing Y N 78 A C2 N3 doub Y N 79 A C2 H2 sing N N 80 A N3 C4 sing Y N 81 C OP3 P sing N N 82 C OP3 HOP3 sing N N 83 C P OP1 doub N N 84 C P OP2 sing N N 85 C P "O5'" sing N N 86 C OP2 HOP2 sing N N 87 C "O5'" "C5'" sing N N 88 C "C5'" "C4'" sing N N 89 C "C5'" "H5'" sing N N 90 C "C5'" "H5''" sing N N 91 C "C4'" "O4'" sing N N 92 C "C4'" "C3'" sing N N 93 C "C4'" "H4'" sing N N 94 C "O4'" "C1'" sing N N 95 C "C3'" "O3'" sing N N 96 C "C3'" "C2'" sing N N 97 C "C3'" "H3'" sing N N 98 C "O3'" "HO3'" sing N N 99 C "C2'" "O2'" sing N N 100 C "C2'" "C1'" sing N N 101 C "C2'" "H2'" sing N N 102 C "O2'" "HO2'" sing N N 103 C "C1'" N1 sing N N 104 C "C1'" "H1'" sing N N 105 C N1 C2 sing N N 106 C N1 C6 sing N N 107 C C2 O2 doub N N 108 C C2 N3 sing N N 109 C N3 C4 doub N N 110 C C4 N4 sing N N 111 C C4 C5 sing N N 112 C N4 H41 sing N N 113 C N4 H42 sing N N 114 C C5 C6 doub N N 115 C C5 H5 sing N N 116 C C6 H6 sing N N 117 G OP3 P sing N N 118 G OP3 HOP3 sing N N 119 G P OP1 doub N N 120 G P OP2 sing N N 121 G P "O5'" sing N N 122 G OP2 HOP2 sing N N 123 G "O5'" "C5'" sing N N 124 G "C5'" "C4'" sing N N 125 G "C5'" "H5'" sing N N 126 G "C5'" "H5''" sing N N 127 G "C4'" "O4'" sing N N 128 G "C4'" "C3'" sing N N 129 G "C4'" "H4'" sing N N 130 G "O4'" "C1'" sing N N 131 G "C3'" "O3'" sing N N 132 G "C3'" "C2'" sing N N 133 G "C3'" "H3'" sing N N 134 G "O3'" "HO3'" sing N N 135 G "C2'" "O2'" sing N N 136 G "C2'" "C1'" sing N N 137 G "C2'" "H2'" sing N N 138 G "O2'" "HO2'" sing N N 139 G "C1'" N9 sing N N 140 G "C1'" "H1'" sing N N 141 G N9 C8 sing Y N 142 G N9 C4 sing Y N 143 G C8 N7 doub Y N 144 G C8 H8 sing N N 145 G N7 C5 sing Y N 146 G C5 C6 sing N N 147 G C5 C4 doub Y N 148 G C6 O6 doub N N 149 G C6 N1 sing N N 150 G N1 C2 sing N N 151 G N1 H1 sing N N 152 G C2 N2 sing N N 153 G C2 N3 doub N N 154 G N2 H21 sing N N 155 G N2 H22 sing N N 156 G N3 C4 sing N N 157 GUN N9 C8 sing Y N 158 GUN N9 C4 sing Y N 159 GUN N9 HN9 sing N N 160 GUN C8 N7 doub Y N 161 GUN C8 H8 sing N N 162 GUN N7 C5 sing Y N 163 GUN C5 C6 sing N N 164 GUN C5 C4 doub Y N 165 GUN C6 O6 doub N N 166 GUN C6 N1 sing N N 167 GUN N1 C2 sing N N 168 GUN N1 HN1 sing N N 169 GUN C2 N2 sing N N 170 GUN C2 N3 doub N N 171 GUN N2 HN21 sing N N 172 GUN N2 HN22 sing N N 173 GUN N3 C4 sing N N 174 HOH O H1 sing N N 175 HOH O H2 sing N N 176 U OP3 P sing N N 177 U OP3 HOP3 sing N N 178 U P OP1 doub N N 179 U P OP2 sing N N 180 U P "O5'" sing N N 181 U OP2 HOP2 sing N N 182 U "O5'" "C5'" sing N N 183 U "C5'" "C4'" sing N N 184 U "C5'" "H5'" sing N N 185 U "C5'" "H5''" sing N N 186 U "C4'" "O4'" sing N N 187 U "C4'" "C3'" sing N N 188 U "C4'" "H4'" sing N N 189 U "O4'" "C1'" sing N N 190 U "C3'" "O3'" sing N N 191 U "C3'" "C2'" sing N N 192 U "C3'" "H3'" sing N N 193 U "O3'" "HO3'" sing N N 194 U "C2'" "O2'" sing N N 195 U "C2'" "C1'" sing N N 196 U "C2'" "H2'" sing N N 197 U "O2'" "HO2'" sing N N 198 U "C1'" N1 sing N N 199 U "C1'" "H1'" sing N N 200 U N1 C2 sing N N 201 U N1 C6 sing N N 202 U C2 O2 doub N N 203 U C2 N3 sing N N 204 U N3 C4 sing N N 205 U N3 H3 sing N N 206 U C4 O4 doub N N 207 U C4 C5 sing N N 208 U C5 C6 doub N N 209 U C5 H5 sing N N 210 U C6 H6 sing N N 211 UMS OP3 P sing N N 212 UMS OP3 HOP3 sing N N 213 UMS P OP1 doub N N 214 UMS P OP2 sing N N 215 UMS P "O5'" sing N N 216 UMS OP2 HOP2 sing N N 217 UMS "O5'" "C5'" sing N N 218 UMS "C5'" "C4'" sing N N 219 UMS "C5'" "H5'" sing N N 220 UMS "C5'" "H5'2" sing N N 221 UMS "C4'" "O4'" sing N N 222 UMS "C4'" "C3'" sing N N 223 UMS "C4'" "H4'" sing N N 224 UMS "O4'" "C1'" sing N N 225 UMS "C3'" "O3'" sing N N 226 UMS "C3'" "C2'" sing N N 227 UMS "C3'" "H3'" sing N N 228 UMS "O3'" "HO3'" sing N N 229 UMS "C2'" "SE2'" sing N N 230 UMS "C2'" "C1'" sing N N 231 UMS "C2'" "H2'" sing N N 232 UMS "SE2'" "CA'" sing N N 233 UMS "C1'" N1 sing N N 234 UMS "C1'" "H1'" sing N N 235 UMS "CA'" "HA'" sing N N 236 UMS "CA'" "HA'2" sing N N 237 UMS "CA'" "HA'3" sing N N 238 UMS N1 C2 sing N N 239 UMS N1 C6 sing N N 240 UMS C2 O2 doub N N 241 UMS C2 N3 sing N N 242 UMS N3 C4 sing N N 243 UMS N3 H3 sing N N 244 UMS C4 O4 doub N N 245 UMS C4 C5 sing N N 246 UMS C5 C6 doub N N 247 UMS C5 H5 sing N N 248 UMS C6 H6 sing N N 249 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7Q81 'double helix' 7Q81 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 2 1_555 C G 24 1_555 -0.957 0.204 0.043 10.676 -8.926 7.852 1 A_C2:G48_C A 2 ? C 48 ? 19 1 1 A A 3 1_555 C U 23 1_555 -0.255 0.006 0.097 6.413 -15.545 5.208 2 A_A3:U47_C A 3 ? C 47 ? 20 1 1 A C 4 1_555 C G 22 1_555 0.030 0.146 0.142 4.541 -9.919 7.275 3 A_C4:G46_C A 4 ? C 46 ? 19 1 1 A U 5 1_555 C A 21 1_555 -0.522 0.077 0.369 0.830 -19.050 9.400 4 A_U5:A45_C A 5 ? C 45 ? 20 1 1 A G 6 1_555 C C 20 1_555 -0.496 0.140 -0.068 -8.003 -20.468 4.273 5 A_G6:C44_C A 6 ? C 44 ? 19 1 1 B A 11 1_555 C A 19 1_555 -6.426 -0.340 -0.674 24.864 12.538 53.845 6 B_A11:A43_C B 11 ? C 43 ? ? 5 1 B C 13 1_555 C G 14 1_555 0.082 0.052 -0.289 -3.337 -5.392 -2.507 7 B_C13:G38_C B 13 ? C 38 ? 19 1 1 B G 14 1_555 C C 11 1_555 -0.266 0.062 -0.455 -11.287 -1.866 3.494 8 B_G14:C35_C B 14 ? C 35 ? 19 1 1 B G 2 1_555 A C 14 1_555 0.649 0.016 -0.875 -19.437 -18.784 -6.218 9 B_G2:C14_A B 2 ? A 14 ? 19 1 1 B A 3 1_555 A U 13 1_555 0.612 0.124 -0.646 -7.997 -15.100 -0.156 10 B_A3:U13_A B 3 ? A 13 ? 20 1 1 B A 4 1_555 A UMS 12 1_555 0.969 -0.171 -0.584 -3.255 -11.040 -13.746 11 B_A4:UMS12_A B 4 ? A 12 ? 20 1 1 B G 5 1_555 A U 11 1_555 1.930 0.162 -0.627 -9.687 -21.652 -9.463 12 B_G5:U11_A B 5 ? A 11 ? ? ? 1 B C 6 1_555 A G 10 1_555 0.680 0.055 -0.373 10.921 -16.286 2.857 13 B_C6:G10_A B 6 ? A 10 ? 19 1 1 B U 7 1_555 A A 9 1_555 0.186 0.060 -0.466 7.143 -6.512 -1.498 14 B_U7:A9_A B 7 ? A 9 ? 20 1 1 B C 8 1_555 A G 8 1_555 0.905 0.050 -0.293 0.650 -7.821 4.260 15 B_C8:G8_A B 8 ? A 8 ? 19 1 1 B U 9 1_555 C A 10 1_555 4.356 -2.288 -0.281 -4.826 -4.073 -98.386 16 B_U9:A34_C B 9 ? C 34 ? 24 4 1 B C 17 1_555 C A 7 1_555 -3.479 0.711 -1.506 43.177 -21.289 -10.887 17 B_C17:A31_C B 17 ? C 31 ? ? ? 1 B C 18 1_555 C G 6 1_555 0.357 -0.036 -0.528 18.485 -16.433 2.620 18 B_C18:G30_C B 18 ? C 30 ? 19 1 1 B C 19 1_555 C G 5 1_555 0.365 0.033 -0.368 5.626 -5.638 8.390 19 B_C19:G29_C B 19 ? C 29 ? 19 1 1 B C 20 1_555 C G 4 1_555 0.234 -0.167 -0.090 3.551 -1.244 8.006 20 B_C20:G28_C B 20 ? C 28 ? 19 1 1 B A 21 1_555 C U 3 1_555 0.033 0.060 0.058 -0.658 -9.326 6.313 21 B_A21:U27_C B 21 ? C 27 ? 20 1 1 B G 22 1_555 C C 2 1_555 0.373 0.122 -0.331 -9.801 -20.717 7.024 22 B_G22:C26_C B 22 ? C 26 ? 19 1 1 B C 23 1_555 C G 1 1_555 0.602 0.351 0.050 -3.479 -16.300 6.956 23 B_C23:G25_C B 23 ? C 25 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 2 1_555 C G 24 1_555 A A 3 1_555 C U 23 1_555 -0.341 -1.301 3.280 -1.499 14.478 34.537 -3.805 0.348 2.562 23.153 2.397 37.393 1 AA_C2A3:U47G48_CC A 2 ? C 48 ? A 3 ? C 47 ? 1 A A 3 1_555 C U 23 1_555 A C 4 1_555 C G 22 1_555 0.138 -1.291 3.312 -1.201 9.978 31.307 -3.914 -0.441 2.774 17.921 2.157 32.842 2 AA_A3C4:G46U47_CC A 3 ? C 47 ? A 4 ? C 46 ? 1 A C 4 1_555 C G 22 1_555 A U 5 1_555 C A 21 1_555 0.352 -1.572 3.140 0.885 8.301 28.011 -4.732 -0.527 2.587 16.686 -1.779 29.205 3 AA_C4U5:A45G46_CC A 4 ? C 46 ? A 5 ? C 45 ? 1 A U 5 1_555 C A 21 1_555 A G 6 1_555 C C 20 1_555 -0.238 -1.549 3.425 3.060 9.627 33.255 -4.042 0.858 2.847 16.359 -5.199 34.714 4 AA_U5G6:C44A45_CC A 5 ? C 45 ? A 6 ? C 44 ? 1 A G 6 1_555 C C 20 1_555 B A 11 1_555 C A 19 1_555 -4.190 -4.046 3.356 17.419 23.082 65.475 -4.054 4.039 1.045 20.348 -15.356 70.921 5 AB_G6A11:A43C44_CC A 6 ? C 44 ? B 11 ? C 43 ? 1 B A 11 1_555 C A 19 1_555 B C 13 1_555 C G 14 1_555 1.961 -1.495 6.772 -8.403 14.785 120.192 -1.142 -1.288 6.555 8.507 4.835 120.915 6 BB_A11C13:G38A43_CC B 11 ? C 43 ? B 13 ? C 38 ? 1 B C 13 1_555 C G 14 1_555 B G 14 1_555 C C 11 1_555 -0.133 -1.645 3.528 2.669 10.829 23.536 -6.544 1.006 2.509 24.838 -6.122 26.011 7 BB_C13G14:C35G38_CC B 13 ? C 38 ? B 14 ? C 35 ? 1 B G 2 1_555 A C 14 1_555 B A 3 1_555 A U 13 1_555 -0.400 -1.056 2.968 -4.632 10.738 27.261 -4.016 -0.059 2.422 21.567 9.304 29.619 8 BB_G2A3:U13C14_AA B 2 ? A 14 ? B 3 ? A 13 ? 1 B A 3 1_555 A U 13 1_555 B A 4 1_555 A UMS 12 1_555 -0.665 -0.708 3.251 -0.996 13.669 36.217 -2.689 0.886 2.829 21.082 1.536 38.642 9 BB_A3A4:UMS12U13_AA B 3 ? A 13 ? B 4 ? A 12 ? 1 B A 4 1_555 A UMS 12 1_555 B G 5 1_555 A U 11 1_555 0.204 -1.424 3.660 2.893 23.607 34.021 -4.562 0.022 2.260 35.482 -4.348 41.307 10 BB_A4G5:U11UMS12_AA B 4 ? A 12 ? B 5 ? A 11 ? 1 B G 5 1_555 A U 11 1_555 B C 6 1_555 A G 10 1_555 -0.114 -1.821 2.766 -6.054 2.844 22.809 -5.188 -1.355 2.470 6.999 14.901 23.757 11 BB_G5C6:G10U11_AA B 5 ? A 11 ? B 6 ? A 10 ? 1 B C 6 1_555 A G 10 1_555 B U 7 1_555 A A 9 1_555 -0.400 -1.571 3.462 0.085 7.356 29.468 -4.481 0.780 2.990 14.184 -0.163 30.352 12 BB_C6U7:A9G10_AA B 6 ? A 10 ? B 7 ? A 9 ? 1 B U 7 1_555 A A 9 1_555 B C 8 1_555 A G 8 1_555 0.426 -1.568 3.415 2.311 9.194 34.722 -3.838 -0.364 2.939 15.061 -3.787 35.954 13 BB_U7C8:G8A9_AA B 7 ? A 9 ? B 8 ? A 8 ? 1 B C 8 1_555 A G 8 1_555 B U 9 1_555 C A 10 1_555 -3.298 -1.806 3.390 3.752 5.723 77.195 -1.606 2.743 3.133 4.578 -3.001 77.451 14 BB_C8U9:A34G8_CA B 8 ? A 8 ? B 9 ? C 34 ? 1 B C 17 1_555 C A 7 1_555 B C 18 1_555 C G 6 1_555 0.365 -1.489 4.113 -8.907 15.093 49.279 -2.892 -1.122 3.440 17.474 10.312 52.119 15 BB_C17C18:G30A31_CC B 17 ? C 31 ? B 18 ? C 30 ? 1 B C 18 1_555 C G 6 1_555 B C 19 1_555 C G 5 1_555 0.110 -1.633 3.554 -0.420 11.650 33.552 -4.402 -0.243 2.846 19.466 0.702 35.464 16 BB_C18C19:G29G30_CC B 18 ? C 30 ? B 19 ? C 29 ? 1 B C 19 1_555 C G 5 1_555 B C 20 1_555 C G 4 1_555 -0.585 -1.794 3.378 -3.075 10.225 26.281 -5.898 0.524 2.564 21.400 6.435 28.332 17 BB_C19C20:G28G29_CC B 19 ? C 29 ? B 20 ? C 28 ? 1 B C 20 1_555 C G 4 1_555 B A 21 1_555 C U 3 1_555 0.001 -1.584 3.078 0.189 15.884 31.654 -4.569 0.022 2.073 27.091 -0.323 35.325 18 BB_C20A21:U27G28_CC B 20 ? C 28 ? B 21 ? C 27 ? 1 B A 21 1_555 C U 3 1_555 B G 22 1_555 C C 2 1_555 0.126 -1.502 3.502 4.924 11.396 32.989 -4.186 0.527 2.834 19.240 -8.314 35.187 19 BB_A21G22:C26U27_CC B 21 ? C 27 ? B 22 ? C 26 ? 1 B G 22 1_555 C C 2 1_555 B C 23 1_555 C G 1 1_555 0.393 -1.474 3.135 1.311 -0.704 32.583 -2.506 -0.480 3.178 -1.254 -2.335 32.616 20 BB_G22C23:G25C26_CC B 22 ? C 26 ? B 23 ? C 25 ? # _pdbx_audit_support.funding_organization 'European Research Council (ERC)' _pdbx_audit_support.country 'European Union' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 1MA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 1MA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7Q7X _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7Q81 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014068 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014068 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011967 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P SE # loop_