HEADER TRANSFERASE 11-NOV-21 7Q8T TITLE CRYSTAL STRUCTURE OF NAMPT BOUND TO LIGAND TSY535(COMPOUND 9A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NAMPRTASE,NAMPT,PRE-B-CELL COLONY-ENHANCING FACTOR 1 COMPND 5 HOMOLOG,PBEF,VISFATIN; COMPND 6 EC: 2.4.2.12; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NAMPT, PBEF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, ACTIVATOR, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.KRAEMER,S.TANG,S.BUTTERWORTH,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (SGC) REVDAT 3 31-JAN-24 7Q8T 1 REMARK REVDAT 2 22-NOV-23 7Q8T 1 JRNL REMARK REVDAT 1 24-NOV-21 7Q8T 0 JRNL AUTH S.TANG,M.GARZON SANZ,O.SMITH,A.KRAMER,D.EGBASE,P.W.CATON, JRNL AUTH 2 S.KNAPP,S.BUTTERWORTH JRNL TITL CHEMISTRY-LED INVESTIGATIONS INTO THE MODE OF ACTION OF JRNL TITL 2 NAMPT ACTIVATORS, RESULTING IN THE DISCOVERY OF NON-PYRIDYL JRNL TITL 3 CLASS NAMPT ACTIVATORS. JRNL REF ACTA PHARM SIN B V. 13 709 2023 JRNL REFN ISSN 2211-3835 JRNL PMID 36873168 JRNL DOI 10.1016/J.APSB.2022.07.016 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 51615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2659 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4018 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 198 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7365 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 751 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.62000 REMARK 3 B22 (A**2) : -2.46000 REMARK 3 B33 (A**2) : -1.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.338 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.238 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.194 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.592 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7631 ; 0.003 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6955 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10369 ; 1.190 ; 1.641 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16177 ; 1.116 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 926 ; 6.464 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 367 ;35.695 ;23.678 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1278 ;13.214 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;14.525 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 978 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8672 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1565 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 8 483 B 8 483 15160 0.070 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7Q8T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292119167. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54298 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 46.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.16200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2GVL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350 0.1M NACL 0.1M HEPES, PH REMARK 280 8.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.12650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 ILE A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 PHE A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 42 REMARK 465 LYS A 43 REMARK 465 THR A 44 REMARK 465 GLU A 45 REMARK 465 ASN A 46 REMARK 465 SER A 47 REMARK 465 LYS A 48 REMARK 465 VAL A 49 REMARK 465 ARG A 50 REMARK 465 LYS A 51 REMARK 465 VAL A 52 REMARK 465 ILE A 484 REMARK 465 GLU A 485 REMARK 465 GLN A 486 REMARK 465 ASP A 487 REMARK 465 VAL A 488 REMARK 465 ALA A 489 REMARK 465 PRO A 490 REMARK 465 HIS A 491 REMARK 465 GLY B -5 REMARK 465 ILE B -4 REMARK 465 ASP B -3 REMARK 465 PRO B -2 REMARK 465 PHE B -1 REMARK 465 THR B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 ALA B 7 REMARK 465 LYS B 42 REMARK 465 LYS B 43 REMARK 465 THR B 44 REMARK 465 GLU B 45 REMARK 465 ASN B 46 REMARK 465 SER B 47 REMARK 465 LYS B 48 REMARK 465 VAL B 49 REMARK 465 ARG B 50 REMARK 465 LYS B 51 REMARK 465 VAL B 52 REMARK 465 ILE B 484 REMARK 465 GLU B 485 REMARK 465 GLN B 486 REMARK 465 ASP B 487 REMARK 465 VAL B 488 REMARK 465 ALA B 489 REMARK 465 PRO B 490 REMARK 465 HIS B 491 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 ARG A 99 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 393 CG OD1 OD2 REMARK 470 HIS A 455 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 466 CD CE NZ REMARK 470 GLN A 481 CG CD OE1 NE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 LYS B 53 CG CD CE NZ REMARK 470 LYS B 77 CD CE NZ REMARK 470 ARG B 99 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 LYS B 289 CE NZ REMARK 470 GLN B 370 CG CD OE1 NE2 REMARK 470 ARG B 424 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 455 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 14 46.57 -88.61 REMARK 500 GLN A 154 -9.91 -59.90 REMARK 500 TYR A 231 -56.38 -124.38 REMARK 500 TYR A 281 -52.94 -125.28 REMARK 500 GLU A 293 -71.00 -131.73 REMARK 500 ASP A 313 29.58 -153.55 REMARK 500 GLN A 388 -50.20 -123.33 REMARK 500 LYS A 389 47.38 -76.08 REMARK 500 ASP A 416 67.13 -158.48 REMARK 500 ALA B 14 46.52 -89.53 REMARK 500 TYR B 231 -56.63 -124.45 REMARK 500 TYR B 281 -52.94 -125.27 REMARK 500 GLU B 293 -71.13 -131.89 REMARK 500 ASP B 313 29.55 -153.36 REMARK 500 LYS B 389 46.68 -76.39 REMARK 500 ASP B 416 66.26 -158.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 985 DISTANCE = 5.89 ANGSTROMS DBREF 7Q8T A 1 491 UNP Q99KQ4 NAMPT_MOUSE 1 491 DBREF 7Q8T B 1 491 UNP Q99KQ4 NAMPT_MOUSE 1 491 SEQADV 7Q8T GLY A -5 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T ILE A -4 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T ASP A -3 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T PRO A -2 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T PHE A -1 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T THR A 0 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T GLY B -5 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T ILE B -4 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T ASP B -3 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T PRO B -2 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T PHE B -1 UNP Q99KQ4 EXPRESSION TAG SEQADV 7Q8T THR B 0 UNP Q99KQ4 EXPRESSION TAG SEQRES 1 A 497 GLY ILE ASP PRO PHE THR MET ASN ALA ALA ALA GLU ALA SEQRES 2 A 497 GLU PHE ASN ILE LEU LEU ALA THR ASP SER TYR LYS VAL SEQRES 3 A 497 THR HIS TYR LYS GLN TYR PRO PRO ASN THR SER LYS VAL SEQRES 4 A 497 TYR SER TYR PHE GLU CYS ARG GLU LYS LYS THR GLU ASN SEQRES 5 A 497 SER LYS VAL ARG LYS VAL LYS TYR GLU GLU THR VAL PHE SEQRES 6 A 497 TYR GLY LEU GLN TYR ILE LEU ASN LYS TYR LEU LYS GLY SEQRES 7 A 497 LYS VAL VAL THR LYS GLU LYS ILE GLN GLU ALA LYS GLU SEQRES 8 A 497 VAL TYR ARG GLU HIS PHE GLN ASP ASP VAL PHE ASN GLU SEQRES 9 A 497 ARG GLY TRP ASN TYR ILE LEU GLU LYS TYR ASP GLY HIS SEQRES 10 A 497 LEU PRO ILE GLU VAL LYS ALA VAL PRO GLU GLY SER VAL SEQRES 11 A 497 ILE PRO ARG GLY ASN VAL LEU PHE THR VAL GLU ASN THR SEQRES 12 A 497 ASP PRO GLU CYS TYR TRP LEU THR ASN TRP ILE GLU THR SEQRES 13 A 497 ILE LEU VAL GLN SER TRP TYR PRO ILE THR VAL ALA THR SEQRES 14 A 497 ASN SER ARG GLU GLN LYS LYS ILE LEU ALA LYS TYR LEU SEQRES 15 A 497 LEU GLU THR SER GLY ASN LEU ASP GLY LEU GLU TYR LYS SEQRES 16 A 497 LEU HIS ASP PHE GLY TYR ARG GLY VAL SER SER GLN GLU SEQRES 17 A 497 THR ALA GLY ILE GLY ALA SER ALA HIS LEU VAL ASN PHE SEQRES 18 A 497 LYS GLY THR ASP THR VAL ALA GLY ILE ALA LEU ILE LYS SEQRES 19 A 497 LYS TYR TYR GLY THR LYS ASP PRO VAL PRO GLY TYR SER SEQRES 20 A 497 VAL PRO ALA ALA GLU HIS SER THR ILE THR ALA TRP GLY SEQRES 21 A 497 LYS ASP HIS GLU LYS ASP ALA PHE GLU HIS ILE VAL THR SEQRES 22 A 497 GLN PHE SER SER VAL PRO VAL SER VAL VAL SER ASP SER SEQRES 23 A 497 TYR ASP ILE TYR ASN ALA CYS GLU LYS ILE TRP GLY GLU SEQRES 24 A 497 ASP LEU ARG HIS LEU ILE VAL SER ARG SER THR GLU ALA SEQRES 25 A 497 PRO LEU ILE ILE ARG PRO ASP SER GLY ASN PRO LEU ASP SEQRES 26 A 497 THR VAL LEU LYS VAL LEU ASP ILE LEU GLY LYS LYS PHE SEQRES 27 A 497 PRO VAL THR GLU ASN SER LYS GLY TYR LYS LEU LEU PRO SEQRES 28 A 497 PRO TYR LEU ARG VAL ILE GLN GLY ASP GLY VAL ASP ILE SEQRES 29 A 497 ASN THR LEU GLN GLU ILE VAL GLU GLY MET LYS GLN LYS SEQRES 30 A 497 LYS TRP SER ILE GLU ASN VAL SER PHE GLY SER GLY GLY SEQRES 31 A 497 ALA LEU LEU GLN LYS LEU THR ARG ASP LEU LEU ASN CYS SEQRES 32 A 497 SER PHE LYS CYS SER TYR VAL VAL THR ASN GLY LEU GLY SEQRES 33 A 497 VAL ASN VAL PHE LYS ASP PRO VAL ALA ASP PRO ASN LYS SEQRES 34 A 497 ARG SER LYS LYS GLY ARG LEU SER LEU HIS ARG THR PRO SEQRES 35 A 497 ALA GLY ASN PHE VAL THR LEU GLU GLU GLY LYS GLY ASP SEQRES 36 A 497 LEU GLU GLU TYR GLY HIS ASP LEU LEU HIS THR VAL PHE SEQRES 37 A 497 LYS ASN GLY LYS VAL THR LYS SER TYR SER PHE ASP GLU SEQRES 38 A 497 VAL ARG LYS ASN ALA GLN LEU ASN ILE GLU GLN ASP VAL SEQRES 39 A 497 ALA PRO HIS SEQRES 1 B 497 GLY ILE ASP PRO PHE THR MET ASN ALA ALA ALA GLU ALA SEQRES 2 B 497 GLU PHE ASN ILE LEU LEU ALA THR ASP SER TYR LYS VAL SEQRES 3 B 497 THR HIS TYR LYS GLN TYR PRO PRO ASN THR SER LYS VAL SEQRES 4 B 497 TYR SER TYR PHE GLU CYS ARG GLU LYS LYS THR GLU ASN SEQRES 5 B 497 SER LYS VAL ARG LYS VAL LYS TYR GLU GLU THR VAL PHE SEQRES 6 B 497 TYR GLY LEU GLN TYR ILE LEU ASN LYS TYR LEU LYS GLY SEQRES 7 B 497 LYS VAL VAL THR LYS GLU LYS ILE GLN GLU ALA LYS GLU SEQRES 8 B 497 VAL TYR ARG GLU HIS PHE GLN ASP ASP VAL PHE ASN GLU SEQRES 9 B 497 ARG GLY TRP ASN TYR ILE LEU GLU LYS TYR ASP GLY HIS SEQRES 10 B 497 LEU PRO ILE GLU VAL LYS ALA VAL PRO GLU GLY SER VAL SEQRES 11 B 497 ILE PRO ARG GLY ASN VAL LEU PHE THR VAL GLU ASN THR SEQRES 12 B 497 ASP PRO GLU CYS TYR TRP LEU THR ASN TRP ILE GLU THR SEQRES 13 B 497 ILE LEU VAL GLN SER TRP TYR PRO ILE THR VAL ALA THR SEQRES 14 B 497 ASN SER ARG GLU GLN LYS LYS ILE LEU ALA LYS TYR LEU SEQRES 15 B 497 LEU GLU THR SER GLY ASN LEU ASP GLY LEU GLU TYR LYS SEQRES 16 B 497 LEU HIS ASP PHE GLY TYR ARG GLY VAL SER SER GLN GLU SEQRES 17 B 497 THR ALA GLY ILE GLY ALA SER ALA HIS LEU VAL ASN PHE SEQRES 18 B 497 LYS GLY THR ASP THR VAL ALA GLY ILE ALA LEU ILE LYS SEQRES 19 B 497 LYS TYR TYR GLY THR LYS ASP PRO VAL PRO GLY TYR SER SEQRES 20 B 497 VAL PRO ALA ALA GLU HIS SER THR ILE THR ALA TRP GLY SEQRES 21 B 497 LYS ASP HIS GLU LYS ASP ALA PHE GLU HIS ILE VAL THR SEQRES 22 B 497 GLN PHE SER SER VAL PRO VAL SER VAL VAL SER ASP SER SEQRES 23 B 497 TYR ASP ILE TYR ASN ALA CYS GLU LYS ILE TRP GLY GLU SEQRES 24 B 497 ASP LEU ARG HIS LEU ILE VAL SER ARG SER THR GLU ALA SEQRES 25 B 497 PRO LEU ILE ILE ARG PRO ASP SER GLY ASN PRO LEU ASP SEQRES 26 B 497 THR VAL LEU LYS VAL LEU ASP ILE LEU GLY LYS LYS PHE SEQRES 27 B 497 PRO VAL THR GLU ASN SER LYS GLY TYR LYS LEU LEU PRO SEQRES 28 B 497 PRO TYR LEU ARG VAL ILE GLN GLY ASP GLY VAL ASP ILE SEQRES 29 B 497 ASN THR LEU GLN GLU ILE VAL GLU GLY MET LYS GLN LYS SEQRES 30 B 497 LYS TRP SER ILE GLU ASN VAL SER PHE GLY SER GLY GLY SEQRES 31 B 497 ALA LEU LEU GLN LYS LEU THR ARG ASP LEU LEU ASN CYS SEQRES 32 B 497 SER PHE LYS CYS SER TYR VAL VAL THR ASN GLY LEU GLY SEQRES 33 B 497 VAL ASN VAL PHE LYS ASP PRO VAL ALA ASP PRO ASN LYS SEQRES 34 B 497 ARG SER LYS LYS GLY ARG LEU SER LEU HIS ARG THR PRO SEQRES 35 B 497 ALA GLY ASN PHE VAL THR LEU GLU GLU GLY LYS GLY ASP SEQRES 36 B 497 LEU GLU GLU TYR GLY HIS ASP LEU LEU HIS THR VAL PHE SEQRES 37 B 497 LYS ASN GLY LYS VAL THR LYS SER TYR SER PHE ASP GLU SEQRES 38 B 497 VAL ARG LYS ASN ALA GLN LEU ASN ILE GLU GLN ASP VAL SEQRES 39 B 497 ALA PRO HIS HET 9IY A 501 39 HET SO4 A 502 5 HET 9IY B 501 39 HET SO4 B 502 5 HETNAM 9IY [(2~{R},3~{S},4~{R},5~{S})-3,4-BIS(OXIDANYL)-5-[4-[[[4- HETNAM 2 9IY (PHENYLSULFONYL) HETNAM 3 9IY PHENYL]CARBAMOYLAMINO]METHYL]PHENYL]OXOLAN-2-YL]METHYL HETNAM 4 9IY DIHYDROGEN PHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 9IY 2(C25 H27 N2 O10 P S) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *751(H2 O) HELIX 1 AA1 ASP A 16 GLN A 25 5 10 HELIX 2 AA2 GLY A 61 LEU A 70 1 10 HELIX 3 AA3 THR A 76 GLN A 92 1 17 HELIX 4 AA4 ASN A 97 ASP A 109 1 13 HELIX 5 AA5 ASP A 138 TYR A 142 5 5 HELIX 6 AA6 TRP A 143 ILE A 148 1 6 HELIX 7 AA7 ILE A 148 GLN A 154 1 7 HELIX 8 AA8 SER A 155 GLY A 181 1 27 HELIX 9 AA9 GLY A 185 TYR A 188 5 4 HELIX 10 AB1 GLY A 194 VAL A 198 5 5 HELIX 11 AB2 SER A 200 LEU A 212 1 13 HELIX 12 AB3 VAL A 221 TYR A 231 1 11 HELIX 13 AB4 GLU A 246 ALA A 252 1 7 HELIX 14 AB5 TRP A 253 ASP A 256 5 4 HELIX 15 AB6 HIS A 257 PHE A 269 1 13 HELIX 16 AB7 ASP A 282 LYS A 289 1 8 HELIX 17 AB8 LEU A 295 ILE A 299 5 5 HELIX 18 AB9 ASN A 316 PHE A 332 1 17 HELIX 19 AC1 ASP A 357 LYS A 371 1 15 HELIX 20 AC2 SER A 374 GLU A 376 5 3 HELIX 21 AC3 GLY A 383 GLN A 388 1 6 HELIX 22 AC4 ASP A 420 ARG A 424 5 5 HELIX 23 AC5 GLY A 446 GLU A 451 5 6 HELIX 24 AC6 SER A 472 ALA A 480 1 9 HELIX 25 AC7 ASP B 16 GLN B 25 5 10 HELIX 26 AC8 GLY B 61 LEU B 70 1 10 HELIX 27 AC9 THR B 76 GLN B 92 1 17 HELIX 28 AD1 ASN B 97 ASP B 109 1 13 HELIX 29 AD2 ASP B 138 TYR B 142 5 5 HELIX 30 AD3 TRP B 143 ILE B 148 1 6 HELIX 31 AD4 ILE B 148 GLN B 154 1 7 HELIX 32 AD5 SER B 155 GLY B 181 1 27 HELIX 33 AD6 GLY B 185 TYR B 188 5 4 HELIX 34 AD7 GLY B 194 VAL B 198 5 5 HELIX 35 AD8 SER B 200 LEU B 212 1 13 HELIX 36 AD9 VAL B 221 TYR B 231 1 11 HELIX 37 AE1 GLU B 246 ALA B 252 1 7 HELIX 38 AE2 TRP B 253 ASP B 256 5 4 HELIX 39 AE3 HIS B 257 PHE B 269 1 13 HELIX 40 AE4 ASP B 282 LYS B 289 1 8 HELIX 41 AE5 LEU B 295 ILE B 299 5 5 HELIX 42 AE6 ASN B 316 PHE B 332 1 17 HELIX 43 AE7 ASP B 357 LYS B 371 1 15 HELIX 44 AE8 SER B 374 GLU B 376 5 3 HELIX 45 AE9 GLY B 383 GLN B 388 1 6 HELIX 46 AF1 ASP B 420 ARG B 424 5 5 HELIX 47 AF2 GLY B 446 GLU B 451 5 6 HELIX 48 AF3 SER B 472 ALA B 480 1 9 SHEET 1 AA1 7 LEU A 409 ASN A 412 0 SHEET 2 AA1 7 CYS A 397 THR A 406 -1 N VAL A 404 O VAL A 411 SHEET 3 AA1 7 THR A 30 CYS A 39 -1 N TYR A 34 O TYR A 403 SHEET 4 AA1 7 VAL A 130 ASN A 136 -1 O VAL A 134 N SER A 35 SHEET 5 AA1 7 ILE A 114 ALA A 118 -1 N GLU A 115 O GLU A 135 SHEET 6 AA1 7 HIS A 459 LYS A 463 -1 O HIS A 459 N ALA A 118 SHEET 7 AA1 7 LYS A 466 VAL A 467 -1 O LYS A 466 N LYS A 463 SHEET 1 AA2 2 GLU A 56 PHE A 59 0 SHEET 2 AA2 2 SER A 123 PRO A 126 -1 O ILE A 125 N THR A 57 SHEET 1 AA3 5 LEU A 190 ASP A 192 0 SHEET 2 AA3 5 VAL A 378 SER A 382 1 O PHE A 380 N HIS A 191 SHEET 3 AA3 5 LEU A 348 GLN A 352 1 N GLN A 352 O SER A 379 SHEET 4 AA3 5 LEU A 308 ARG A 311 1 N ILE A 310 O ARG A 349 SHEET 5 AA3 5 VAL A 274 VAL A 277 1 N VAL A 274 O ILE A 309 SHEET 1 AA4 2 THR A 335 GLU A 336 0 SHEET 2 AA4 2 LYS A 342 LEU A 343 -1 O LEU A 343 N THR A 335 SHEET 1 AA5 2 SER A 431 ARG A 434 0 SHEET 2 AA5 2 PHE A 440 LEU A 443 -1 O LEU A 443 N SER A 431 SHEET 1 AA6 7 LEU B 409 ASN B 412 0 SHEET 2 AA6 7 CYS B 397 THR B 406 -1 N VAL B 404 O VAL B 411 SHEET 3 AA6 7 THR B 30 CYS B 39 -1 N TYR B 34 O TYR B 403 SHEET 4 AA6 7 VAL B 130 ASN B 136 -1 O VAL B 134 N SER B 35 SHEET 5 AA6 7 ILE B 114 ALA B 118 -1 N GLU B 115 O GLU B 135 SHEET 6 AA6 7 HIS B 459 LYS B 463 -1 O HIS B 459 N ALA B 118 SHEET 7 AA6 7 LYS B 466 VAL B 467 -1 O LYS B 466 N LYS B 463 SHEET 1 AA7 2 GLU B 56 PHE B 59 0 SHEET 2 AA7 2 SER B 123 PRO B 126 -1 O ILE B 125 N THR B 57 SHEET 1 AA8 5 LEU B 190 ASP B 192 0 SHEET 2 AA8 5 VAL B 378 SER B 382 1 O PHE B 380 N HIS B 191 SHEET 3 AA8 5 LEU B 348 GLN B 352 1 N GLN B 352 O SER B 379 SHEET 4 AA8 5 LEU B 308 ARG B 311 1 N ILE B 310 O ARG B 349 SHEET 5 AA8 5 VAL B 274 VAL B 277 1 N VAL B 274 O ILE B 309 SHEET 1 AA9 2 THR B 335 GLU B 336 0 SHEET 2 AA9 2 LYS B 342 LEU B 343 -1 O LEU B 343 N THR B 335 SHEET 1 AB1 2 SER B 431 ARG B 434 0 SHEET 2 AB1 2 PHE B 440 LEU B 443 -1 O LEU B 443 N SER B 431 CRYST1 61.101 108.253 83.693 90.00 97.16 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016366 0.000000 0.002054 0.00000 SCALE2 0.000000 0.009238 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012042 0.00000