data_7QA2 # _entry.id 7QA2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7QA2 pdb_00007qa2 10.2210/pdb7qa2/pdb WWPDB D_1292119230 ? ? BMRB 34677 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'derivative structure' 7Q48 unspecified PDB 'derivative structure' 7Q6L unspecified BMRB ;Solution structure of an intramolecular RNA G-quadruplex formed by the 6A mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene ; 34677 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7QA2 _pdbx_database_status.recvd_initial_deposition_date 2021-11-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category RNA-Puzzles _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, Z.' 1 0000-0001-7730-9098 'Falk, T.' 2 0000-0001-9737-7055 'Jurt, S.' 3 0000-0002-6016-8505 'Johannsen, S.' 4 0000-0001-7973-8996 'Sigel, R.K.O.' 5 0000-0002-1307-7993 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Solution structure of an intramolecular RNA G-quadruplex formed by the 6A mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Z.' 1 0000-0001-7730-9098 primary 'Falk, T.' 2 0000-0001-9737-7055 primary 'Jurt, S.' 3 0000-0002-6016-8505 primary 'Johannsen, S.' 4 0000-0001-7973-8996 primary 'Sigel, R.K.O.' 5 0000-0002-1307-7993 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(*GP*GP*GP*CP*CP*AP*UP*GP*GP*GP*GP*UP*GP*GP*GP*AP*GP*CP*UP*GP*GP*G)-3') ; _entity.formula_weight 7280.379 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGGCCAUGGGGUGGGAGCUGGG _entity_poly.pdbx_seq_one_letter_code_can GGGCCAUGGGGUGGGAGCUGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 C n 1 5 C n 1 6 A n 1 7 U n 1 8 G n 1 9 G n 1 10 G n 1 11 G n 1 12 U n 1 13 G n 1 14 G n 1 15 G n 1 16 A n 1 17 G n 1 18 C n 1 19 U n 1 20 G n 1 21 G n 1 22 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7QA2 _struct_ref.pdbx_db_accession 7QA2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7QA2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7QA2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 2 isotropic 2 2 2 '2D 1H-1H NOESY' 2 isotropic 3 2 2 '2D 1H-1H TOCSY' 2 isotropic 4 2 2 '2D 1H-13C HSQC' 2 isotropic 5 1 1 JR-HMBC 1 isotropic 6 3 3 'H8N2 HNN-COSY' 2 isotropic 7 3 3 'H1N2 HNN-COSY' 2 isotropic 8 4 4 'constant-time HSQC' 1 isotropic 9 5 5 'constant-time HSQC' 2 isotropic 10 6 6 'constant-time HSQC' 2 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 7.0 2 ? ? mM exchangeable ? pH ? ? K 2 298 atm 1 7.0 2 ? ? mM non-exchangeable ? pH ? ? K 3 298 atm 1 7.0 2 ? ? mM 'hydrogen bond' ? pH ? ? K 4 298 atm 1 7.0 2 ? ? mM 'constant-time HSQC of A' ? pH ? ? K 5 298 atm 1 7.0 2 ? ? mM 'constant-time HSQC of G' ? pH ? ? K 6 298 atm 1 7.0 2 ? ? mM 'constant-time HSQC of U' ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.6 mM BCL-2 6A, 90% H2O/10% D2O' '90% H2O/10% D2O' 'BCL-2 6A mutant_H2O' solution '0.6 mM RNA, 2.0 mM KCl, 90/10% H2O/D2O, pH=7' 2 '0.6 mM BCL-2 6A, 100% D2O' '100% D2O' 'BCL-2 6A mutant_D2O' solution '0.6 mM RNA, 2.0 mM KCl, 100% D2O, pH=7' 3 '0.15 mM [U-13C; U-15N]-Gua BCL-2 6A, 90% H2O/10% D2O' '90% H2O/10% D2O' 'BCL-2 6A mutant_G 13C, 15N-labeled_H2O' solution '0.15 mM RNA, 2.0 mM KCl, 90/10% H2O/D2O, pH=7' 4 '0.4 mM [U-13C; U-15N]-Ade BCL-2 6A, 100% D2O' '100% D2O' 'BCL-2 6A mutant_A 13C, 15N-labeled_D2O' solution '0.4 mM RNA, 2.0 mM KCl, 100% D2O, pH=7' 5 '0.15 mM [U-13C; U-15N]-Gua BCL-2 6A, 100% D2O' '100% D2O' 'BCL-2 6A mutant_G 13C, 15N-labeled_D2O' solution '0.15 mM RNA, 2.0 mM KCl, 100% D2O, pH=7' 6 '0.4 mM [U-13C; U-15N]-Ura BCL-2 6A, 100% D2O' '100% D2O' 'BCL-2 6A mutant_U 13C, 15N-labeled_D2O' solution '0.4 mM RNA, 2.0 mM KCl, 100% D2O, pH=7' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 600 Cryo-TCI 2 AVANCE ? Bruker 700 Cryo-TXI # _pdbx_nmr_refine.entry_id 7QA2 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 7QA2 _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7QA2 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin 4.0.6 'Bruker Biospin' 2 'chemical shift assignment' NMRFAM-SPARKY 1.414 'Lee W, Tonelli M, Markley JL' 3 'peak picking' NMRFAM-SPARKY 1.414 'Lee W, Tonelli M, Markley JL' 4 'structure calculation' 'X-PLOR NIH' 3.0 'Schwieters, Kuszewski, Tjandra and Clore' 5 refinement 'X-PLOR NIH' 3.0 'Schwieters, Kuszewski, Tjandra and Clore' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7QA2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7QA2 _struct.title ;Solution structure of an intramolecular RNA G-quadruplex formed by the 6A mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto-oncogene ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7QA2 _struct_keywords.text ;G-quadruplex, BCL-2, mRNA, 5'UTR, intramolecular, RNA ; _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A G 9 O6 ? ? A G 1 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A G 9 N7 ? ? A G 1 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A G 1 N7 ? ? ? 1_555 A G 20 N2 ? ? A G 1 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A G 1 O6 ? ? ? 1_555 A G 20 N1 ? ? A G 1 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 N1 ? ? ? 1_555 A G 10 O6 ? ? A G 2 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A G 2 N2 ? ? ? 1_555 A G 10 N7 ? ? A G 2 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A G 2 N7 ? ? ? 1_555 A G 21 N2 ? ? A G 2 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A G 2 O6 ? ? ? 1_555 A G 21 N1 ? ? A G 2 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A G 3 N1 ? ? ? 1_555 A G 11 O6 ? ? A G 3 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A G 3 N2 ? ? ? 1_555 A G 11 N7 ? ? A G 3 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A G 3 O6 ? ? ? 1_555 A A 16 N6 ? ? A G 3 A A 16 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog12 hydrog ? ? A G 3 N7 ? ? ? 1_555 A G 22 N2 ? ? A G 3 A G 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A G 3 O6 ? ? ? 1_555 A G 22 N1 ? ? A G 3 A G 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A G 9 N1 ? ? ? 1_555 A G 13 O6 ? ? A G 9 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A G 9 N2 ? ? ? 1_555 A G 13 N7 ? ? A G 9 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 14 O6 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 14 N7 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 11 N1 ? ? ? 1_555 A G 15 O6 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 11 N2 ? ? ? 1_555 A G 15 N7 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 13 N1 ? ? ? 1_555 A G 20 O6 ? ? A G 13 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A G 13 N2 ? ? ? 1_555 A G 20 N7 ? ? A G 13 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 14 N1 ? ? ? 1_555 A G 21 O6 ? ? A G 14 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A G 14 N2 ? ? ? 1_555 A G 21 N7 ? ? A G 14 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A G 15 N1 ? ? ? 1_555 A G 22 O6 ? ? A G 15 A G 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A G 15 N2 ? ? ? 1_555 A G 22 N7 ? ? A G 15 A G 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A A 16 N6 ? ? ? 1_555 A G 22 O6 ? ? A A 16 A G 22 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7QA2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA A . n A 1 2 G 2 2 2 G GUA A . n A 1 3 G 3 3 3 G GUA A . n A 1 4 C 4 4 4 C CYT A . n A 1 5 C 5 5 5 C CYT A . n A 1 6 A 6 6 6 A ADE A . n A 1 7 U 7 7 7 U URI A . n A 1 8 G 8 8 8 G GUA A . n A 1 9 G 9 9 9 G GUA A . n A 1 10 G 10 10 10 G GUA A . n A 1 11 G 11 11 11 G GUA A . n A 1 12 U 12 12 12 U URI A . n A 1 13 G 13 13 13 G GUA A . n A 1 14 G 14 14 14 G GUA A . n A 1 15 G 15 15 15 G GUA A . n A 1 16 A 16 16 16 A ADE A . n A 1 17 G 17 17 17 G GUA A . n A 1 18 C 18 18 18 C CYT A . n A 1 19 U 19 19 19 U URI A . n A 1 20 G 20 20 20 G GUA A . n A 1 21 G 21 21 21 G GUA A . n A 1 22 G 22 22 22 G GUA A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email roland.sigel@chem.uzh.ch _pdbx_contact_author.name_first Roland _pdbx_contact_author.name_last Sigel _pdbx_contact_author.name_mi 'K. O.' _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1307-7993 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-11-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'BCL-2 6A' 0.6 ? mM 'natural abundance' 2 'BCL-2 6A' 0.6 ? mM 'natural abundance' 3 'BCL-2 6A' 0.15 ? mM '[U-13C; U-15N]-Gua' 4 'BCL-2 6A' 0.4 ? mM '[U-13C; U-15N]-Ade' 5 'BCL-2 6A' 0.15 ? mM '[U-13C; U-15N]-Gua' 6 'BCL-2 6A' 0.4 ? mM '[U-13C; U-15N]-Ura' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7QA2 'double helix' 7QA2 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 2 1_555 A G 10 1_555 1.229 3.816 -0.032 -4.293 10.246 -93.435 1 A_G2:G10_A A 2 ? A 10 ? 6 3 1 A G 13 1_555 A G 9 1_555 -1.879 -3.613 0.038 19.661 2.822 86.633 2 A_G13:G9_A A 13 ? A 9 ? 6 3 1 A G 20 1_555 A G 1 1_555 1.924 3.478 -0.306 -19.858 4.341 -87.878 3 A_G20:G1_A A 20 ? A 1 ? 6 3 1 A G 21 1_555 A G 14 1_555 -1.347 -3.886 -0.148 2.175 -7.416 90.199 4 A_G21:G14_A A 21 ? A 14 ? 6 3 1 A G 22 1_555 A G 15 1_555 -0.566 -3.715 -0.095 -22.854 -7.031 89.544 5 A_G22:G15_A A 22 ? A 15 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 2 1_555 A G 10 1_555 A G 13 1_555 A G 9 1_555 -1.240 -1.885 -3.146 6.234 -7.611 61.530 -2.155 0.929 -3.018 -7.389 -6.052 62.236 1 AA_G2G13:G9G10_AA A 2 ? A 10 ? A 13 ? A 9 ? 1 A G 13 1_555 A G 9 1_555 A G 20 1_555 A G 1 1_555 1.798 3.477 0.045 -21.441 5.135 -178.004 -1.739 0.899 0.048 -2.568 -10.722 -178.040 2 AA_G13G20:G1G9_AA A 13 ? A 9 ? A 20 ? A 1 ? 1 A G 20 1_555 A G 1 1_555 A G 21 1_555 A G 14 1_555 0.931 1.743 3.121 -8.193 10.276 -63.091 -2.048 0.548 2.925 -9.710 -7.741 -64.307 3 AA_G20G21:G14G1_AA A 20 ? A 1 ? A 21 ? A 14 ? 1 A G 21 1_555 A G 14 1_555 A G 22 1_555 A G 15 1_555 -0.326 -1.468 3.414 -2.408 8.555 25.779 -5.211 0.102 2.809 18.490 5.205 27.243 4 AA_G21G22:G15G14_AA A 21 ? A 14 ? A 22 ? A 15 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swiss National Science Foundation' Switzerland 165868 1 'University of Zurich' Switzerland 'FK-14-100, FK-15-096' 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #