HEADER CHAPERONE 21-NOV-21 7QBY TITLE REFINED STRUCTURE OF THE T193A MUTANT IN THE C-TERMINAL DOMAIN OF TITLE 2 DNAJB6B COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM B OF DNAJ HOMOLOG SUBFAMILY B MEMBER 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HHDJ1,HEAT SHOCK PROTEIN J2,HSJ-2,MRJ,MSJ-1; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE C TERMINAL DOMAIN OF DNAJB6B INCLUDING THE T193A COMPND 7 MUTATION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNAJB6, HSJ2, MRJ, MSJ1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HSP40 CHAPERONE, ANTI-AGGREGATION, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR T.K.KARAMANOS,E.E.CAWOOD REVDAT 2 11-MAY-22 7QBY 1 JRNL REVDAT 1 30-MAR-22 7QBY 0 JRNL AUTH E.E.CAWOOD,G.M.CLORE,T.K.KARAMANOS JRNL TITL MICROSECOND BACKBONE MOTIONS MODULATE THE OLIGOMERIZATION OF JRNL TITL 2 THE DNAJB6 CHAPERONE. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 61 16403 2022 JRNL REFN ESSN 1521-3773 JRNL PMID 35247211 JRNL DOI 10.1002/ANIE.202116403 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292119330. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 87 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.2 MM [U-13C; U-15N] DNAJ REMARK 210 HOMOLOG SUBFAMILY B MEMBER 6 C- REMARK 210 TERMINAL DOMAIN, 20 MM SODIUM REMARK 210 PHOSPHATE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.02 % V/V SODIUM REMARK 210 AZIDE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY HCH; 3D 1H-13C REMARK 210 NOESY CCH; JHNHA ARTSY; 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 185 REMARK 465 GLY A 186 REMARK 465 ASN A 187 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 196 105.79 -160.84 REMARK 500 1 LYS A 225 18.43 -146.94 REMARK 500 1 LEU A 235 -73.37 -152.69 REMARK 500 1 ARG A 237 79.95 -151.51 REMARK 500 2 LYS A 196 105.25 -164.46 REMARK 500 2 LYS A 225 13.75 -146.29 REMARK 500 2 ARG A 237 -49.19 -156.97 REMARK 500 2 LEU A 238 -34.68 -142.99 REMARK 500 3 LYS A 196 101.01 -161.99 REMARK 500 3 ARG A 237 80.43 -153.40 REMARK 500 4 LYS A 196 106.26 -163.90 REMARK 500 4 LYS A 225 19.91 -141.97 REMARK 500 4 ARG A 237 -47.77 -157.92 REMARK 500 4 LEU A 238 -39.21 -154.87 REMARK 500 5 LYS A 196 108.09 -161.55 REMARK 500 5 LYS A 225 18.30 -146.27 REMARK 500 5 LEU A 235 -61.88 -152.66 REMARK 500 5 LEU A 236 -64.09 -154.28 REMARK 500 5 ARG A 237 -55.35 -163.32 REMARK 500 5 LEU A 238 -41.98 -156.88 REMARK 500 6 LYS A 196 112.88 -161.01 REMARK 500 6 LYS A 225 27.76 -151.42 REMARK 500 6 ARG A 237 -46.68 -156.67 REMARK 500 6 LEU A 238 -38.24 -154.55 REMARK 500 7 LYS A 225 25.02 -148.67 REMARK 500 7 LEU A 235 -61.95 -152.72 REMARK 500 7 ARG A 237 68.69 -159.67 REMARK 500 8 LYS A 225 30.27 -151.49 REMARK 500 8 ARG A 237 74.65 -151.06 REMARK 500 9 LEU A 227 110.86 -160.19 REMARK 500 9 ARG A 237 -52.48 -159.63 REMARK 500 9 LEU A 238 -37.10 -143.14 REMARK 500 10 LYS A 225 22.38 -147.51 REMARK 500 10 ARG A 237 -44.78 -157.76 REMARK 500 10 LEU A 238 -36.64 -153.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U3S RELATED DB: PDB REMARK 900 STRUCTURE CONTAINING BOTH JD AND CTD REMARK 900 RELATED ID: 6U3R RELATED DB: PDB REMARK 900 STRUCTURE CONTAINING BOTH JD AND CTD REMARK 900 RELATED ID: 7JSQ RELATED DB: PDB REMARK 900 STRUCTURE OF WT CTD REMARK 900 RELATED ID: 34686 RELATED DB: BMRB REMARK 900 REFINED STRUCTURE OF THE T193A MUTANT IN THE C-TERMINAL DOMAIN OF REMARK 900 DNAJB6B. BMRB ID 30656 RELATES TO THE WILD TYPE SEQUENCE (W/ REMARK 900 DIFFERENT NUMBERING) AND WAS ALSO USED TO DERIVE ASSIGNMENTS. DBREF 7QBY A 185 241 UNP O75190 DNJB6_HUMAN 185 241 SEQADV 7QBY ALA A 193 UNP O75190 THR 193 ENGINEERED MUTATION SEQRES 1 A 57 MET GLY ASN PHE LYS SER ILE SER ALA SER THR LYS MET SEQRES 2 A 57 VAL ASN GLY ARG LYS ILE THR THR LYS ARG ILE VAL GLU SEQRES 3 A 57 ASN GLY GLN GLU ARG VAL GLU VAL GLU GLU ASP GLY GLN SEQRES 4 A 57 LEU LYS SER LEU THR ILE ASN GLY LYS GLU GLN LEU LEU SEQRES 5 A 57 ARG LEU ASP ASN LYS SHEET 1 AA1 4 SER A 190 VAL A 198 0 SHEET 2 AA1 4 ARG A 201 VAL A 209 -1 O ILE A 203 N LYS A 196 SHEET 3 AA1 4 GLU A 214 GLU A 220 -1 O ARG A 215 N ILE A 208 SHEET 4 AA1 4 GLN A 223 ILE A 229 -1 O THR A 228 N VAL A 216 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1