data_7QDD # _entry.id 7QDD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7QDD pdb_00007qdd 10.2210/pdb7qdd/pdb WWPDB D_1292119248 ? ? BMRB 34691 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-26 2 'Structure model' 1 1 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' citation 4 2 'Structure model' citation_author # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7QDD _pdbx_database_status.recvd_initial_deposition_date 2021-11-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR structure of Npl3 RRM1 bound to the AUCCAA RNA' _pdbx_database_related.db_id 34691 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email allain@mol.biol.ethz.ch _pdbx_contact_author.name_first Frederic _pdbx_contact_author.name_last ALLAIN _pdbx_contact_author.name_mi H.-T. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4550-6908 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Clery, A.' 1 0000-0002-4550-6908 'Allain, F.H.-T.' 2 0000-0002-2131-6237 'Moursy, A.' 3 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Nat Commun' ? ? 2041-1723 ? ? 14 ? 7166 7166 'RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing.' 2023 ? 10.1038/s41467-023-42962-4 37935663 ? ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? 2692-8205 ? ? ? ? ? ? 'The structure of yeast Npl3 bound to RNA reveals a cooperative sequence-specific recognition and an RNA chaperone role in splicing' 2022 ? 10.1101/2022.05.24.493251 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moursy, A.' 1 ? primary 'Clery, A.' 2 0000-0002-4550-6908 primary 'Gerhardy, S.' 3 0000-0003-1826-5907 primary 'Betz, K.M.' 4 0000-0001-5041-6205 primary 'Rao, S.' 5 ? primary 'Mazur, J.' 6 0000-0002-1677-011X primary 'Campagne, S.' 7 ? primary 'Beusch, I.' 8 0000-0001-7758-4348 primary 'Duszczyk, M.M.' 9 ? primary 'Robinson, M.D.' 10 0000-0002-3048-5518 primary 'Panse, V.G.' 11 0000-0002-4770-7068 primary 'Allain, F.H.' 12 0000-0002-2131-6237 1 'Moursy, A.' 13 ? 1 'Clery, A.' 14 ? 1 'Gerhardy, S.' 15 ? 1 'Betz, K.M.' 16 ? 1 'Rao, S.' 17 ? 1 'Campagne, S.' 18 ? 1 'Beusch, I.' 19 ? 1 'Duszczyk, M.M.' 20 ? 1 'Robinson, M.D.' 21 ? 1 'Panse, V.G.' 22 ? 1 'Allain, F.H.T.' 23 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*AP*UP*CP*CP*AP*A)-3') ; 1859.189 1 ? ? ? 'synthetic RNA from horizon' 2 polymer man 'Nucleolar protein 3' 10121.476 1 ? ? ? 'recombinant protein' # _entity_name_com.entity_id 2 _entity_name_com.name 'Mitochondrial targeting suppressor 1 protein,Nuclear polyadenylated RNA-binding protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AUCCAA AUCCAA A ? 2 'polypeptide(L)' no no ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYR ; ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYR ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 U n 1 3 C n 1 4 C n 1 5 A n 1 6 A n 2 1 MET n 2 2 HIS n 2 3 HIS n 2 4 ARG n 2 5 GLN n 2 6 GLU n 2 7 GLY n 2 8 GLU n 2 9 LEU n 2 10 SER n 2 11 ASN n 2 12 THR n 2 13 ARG n 2 14 LEU n 2 15 PHE n 2 16 VAL n 2 17 ARG n 2 18 PRO n 2 19 PHE n 2 20 PRO n 2 21 LEU n 2 22 ASP n 2 23 VAL n 2 24 GLN n 2 25 GLU n 2 26 SER n 2 27 GLU n 2 28 LEU n 2 29 ASN n 2 30 GLU n 2 31 ILE n 2 32 PHE n 2 33 GLY n 2 34 PRO n 2 35 PHE n 2 36 GLY n 2 37 PRO n 2 38 MET n 2 39 LYS n 2 40 GLU n 2 41 VAL n 2 42 LYS n 2 43 ILE n 2 44 LEU n 2 45 ASN n 2 46 GLY n 2 47 PHE n 2 48 ALA n 2 49 PHE n 2 50 VAL n 2 51 GLU n 2 52 PHE n 2 53 GLU n 2 54 GLU n 2 55 ALA n 2 56 GLU n 2 57 SER n 2 58 ALA n 2 59 ALA n 2 60 LYS n 2 61 ALA n 2 62 ILE n 2 63 GLU n 2 64 GLU n 2 65 VAL n 2 66 HIS n 2 67 GLY n 2 68 LYS n 2 69 SER n 2 70 PHE n 2 71 ALA n 2 72 ASN n 2 73 GLN n 2 74 PRO n 2 75 LEU n 2 76 GLU n 2 77 VAL n 2 78 VAL n 2 79 TYR n 2 80 SER n 2 81 LYS n 2 82 LEU n 2 83 PRO n 2 84 ALA n 2 85 LYS n 2 86 ARG n 2 87 TYR n 2 88 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 88 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NPL3, MTR13, MTS1, NAB1, NOP3, YDR432W, D9461.19' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae (strain ATCC 204508 / S288c)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'unidentified plasmid' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 45202 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 108 108 A A A . n A 1 2 U 2 109 109 U U A . n A 1 3 C 3 110 110 C C A . n A 1 4 C 4 111 111 C C A . n A 1 5 A 5 112 112 A A A . n A 1 6 A 6 113 113 A A A . n B 2 1 MET 1 114 114 MET MET B . n B 2 2 HIS 2 115 115 HIS HIS B . n B 2 3 HIS 3 116 116 HIS HIS B . n B 2 4 ARG 4 117 117 ARG ARG B . n B 2 5 GLN 5 118 118 GLN GLN B . n B 2 6 GLU 6 119 119 GLU GLU B . n B 2 7 GLY 7 120 120 GLY GLY B . n B 2 8 GLU 8 121 121 GLU GLU B . n B 2 9 LEU 9 122 122 LEU LEU B . n B 2 10 SER 10 123 123 SER SER B . n B 2 11 ASN 11 124 124 ASN ASN B . n B 2 12 THR 12 125 125 THR THR B . n B 2 13 ARG 13 126 126 ARG ARG B . n B 2 14 LEU 14 127 127 LEU LEU B . n B 2 15 PHE 15 128 128 PHE PHE B . n B 2 16 VAL 16 129 129 VAL VAL B . n B 2 17 ARG 17 130 130 ARG ARG B . n B 2 18 PRO 18 131 131 PRO PRO B . n B 2 19 PHE 19 132 132 PHE PHE B . n B 2 20 PRO 20 133 133 PRO PRO B . n B 2 21 LEU 21 134 134 LEU LEU B . n B 2 22 ASP 22 135 135 ASP ASP B . n B 2 23 VAL 23 136 136 VAL VAL B . n B 2 24 GLN 24 137 137 GLN GLN B . n B 2 25 GLU 25 138 138 GLU GLU B . n B 2 26 SER 26 139 139 SER SER B . n B 2 27 GLU 27 140 140 GLU GLU B . n B 2 28 LEU 28 141 141 LEU LEU B . n B 2 29 ASN 29 142 142 ASN ASN B . n B 2 30 GLU 30 143 143 GLU GLU B . n B 2 31 ILE 31 144 144 ILE ILE B . n B 2 32 PHE 32 145 145 PHE PHE B . n B 2 33 GLY 33 146 146 GLY GLY B . n B 2 34 PRO 34 147 147 PRO PRO B . n B 2 35 PHE 35 148 148 PHE PHE B . n B 2 36 GLY 36 149 149 GLY GLY B . n B 2 37 PRO 37 150 150 PRO PRO B . n B 2 38 MET 38 151 151 MET MET B . n B 2 39 LYS 39 152 152 LYS LYS B . n B 2 40 GLU 40 153 153 GLU GLU B . n B 2 41 VAL 41 154 154 VAL VAL B . n B 2 42 LYS 42 155 155 LYS LYS B . n B 2 43 ILE 43 156 156 ILE ILE B . n B 2 44 LEU 44 157 157 LEU LEU B . n B 2 45 ASN 45 158 158 ASN ASN B . n B 2 46 GLY 46 159 159 GLY GLY B . n B 2 47 PHE 47 160 160 PHE PHE B . n B 2 48 ALA 48 161 161 ALA ALA B . n B 2 49 PHE 49 162 162 PHE PHE B . n B 2 50 VAL 50 163 163 VAL VAL B . n B 2 51 GLU 51 164 164 GLU GLU B . n B 2 52 PHE 52 165 165 PHE PHE B . n B 2 53 GLU 53 166 166 GLU GLU B . n B 2 54 GLU 54 167 167 GLU GLU B . n B 2 55 ALA 55 168 168 ALA ALA B . n B 2 56 GLU 56 169 169 GLU GLU B . n B 2 57 SER 57 170 170 SER SER B . n B 2 58 ALA 58 171 171 ALA ALA B . n B 2 59 ALA 59 172 172 ALA ALA B . n B 2 60 LYS 60 173 173 LYS LYS B . n B 2 61 ALA 61 174 174 ALA ALA B . n B 2 62 ILE 62 175 175 ILE ILE B . n B 2 63 GLU 63 176 176 GLU GLU B . n B 2 64 GLU 64 177 177 GLU GLU B . n B 2 65 VAL 65 178 178 VAL VAL B . n B 2 66 HIS 66 179 179 HIS HIS B . n B 2 67 GLY 67 180 180 GLY GLY B . n B 2 68 LYS 68 181 181 LYS LYS B . n B 2 69 SER 69 182 182 SER SER B . n B 2 70 PHE 70 183 183 PHE PHE B . n B 2 71 ALA 71 184 184 ALA ALA B . n B 2 72 ASN 72 185 185 ASN ASN B . n B 2 73 GLN 73 186 186 GLN GLN B . n B 2 74 PRO 74 187 187 PRO PRO B . n B 2 75 LEU 75 188 188 LEU LEU B . n B 2 76 GLU 76 189 189 GLU GLU B . n B 2 77 VAL 77 190 190 VAL VAL B . n B 2 78 VAL 78 191 191 VAL VAL B . n B 2 79 TYR 79 192 192 TYR TYR B . n B 2 80 SER 80 193 193 SER SER B . n B 2 81 LYS 81 194 194 LYS LYS B . n B 2 82 LEU 82 195 195 LEU LEU B . n B 2 83 PRO 83 196 196 PRO PRO B . n B 2 84 ALA 84 197 197 ALA ALA B . n B 2 85 LYS 85 198 198 LYS LYS B . n B 2 86 ARG 86 199 199 ARG ARG B . n B 2 87 TYR 87 200 200 TYR TYR B . n B 2 88 ARG 88 201 201 ARG ARG B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7QDD _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7QDD _struct.title 'NMR structure of Npl3 RRM1 bound to the AUCCAA RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7QDD _struct_keywords.text 'splicing, U2 snRNA, RRM, split-iCRAC, yeast, protein-RNA complex, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7QDD 7QDD ? 1 ? 1 2 UNP NOP3_YEAST Q01560 ? 2 ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYR ; 114 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7QDD A 1 ? 6 ? 7QDD 108 ? 113 ? 108 113 2 2 7QDD B 1 ? 88 ? Q01560 114 ? 201 ? 114 201 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1500 ? 1 MORE -2 ? 1 'SSA (A^2)' 6180 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN B 24 ? GLY B 33 ? GLN B 137 GLY B 146 1 ? 10 HELX_P HELX_P2 AA2 PRO B 34 ? GLY B 36 ? PRO B 147 GLY B 149 5 ? 3 HELX_P HELX_P3 AA3 GLU B 54 ? HIS B 66 ? GLU B 167 HIS B 179 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 1 -5.66 2 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 2 -4.29 3 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 3 -5.14 4 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 4 -5.15 5 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 5 -5.28 6 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 6 -4.31 7 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 7 -5.40 8 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 8 -4.53 9 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 9 -4.04 10 ARG 17 B . ? ARG 130 B PRO 18 B ? PRO 131 B 10 -4.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET B 38 ? LEU B 44 ? MET B 151 LEU B 157 AA1 2 PHE B 47 ? PHE B 52 ? PHE B 160 PHE B 165 AA1 3 LEU B 9 ? ARG B 17 ? LEU B 122 ARG B 130 AA1 4 GLU B 76 ? LYS B 81 ? GLU B 189 LYS B 194 AA2 1 SER B 69 ? PHE B 70 ? SER B 182 PHE B 183 AA2 2 GLN B 73 ? PRO B 74 ? GLN B 186 PRO B 187 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU B 40 ? N GLU B 153 O GLU B 51 ? O GLU B 164 AA1 2 3 O VAL B 50 ? O VAL B 163 N LEU B 14 ? N LEU B 127 AA1 3 4 N PHE B 15 ? N PHE B 128 O VAL B 78 ? O VAL B 191 AA2 1 2 N PHE B 70 ? N PHE B 183 O GLN B 73 ? O GLN B 186 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 135 ? ? -146.62 12.38 2 1 PRO B 147 ? ? -61.62 7.97 3 2 ASP B 135 ? ? -140.78 10.07 4 2 PRO B 147 ? ? -62.02 11.71 5 2 ALA B 197 ? ? -168.66 -25.85 6 3 ASP B 135 ? ? -148.77 14.19 7 3 PRO B 147 ? ? -61.73 7.81 8 4 GLN B 118 ? ? -145.88 -11.38 9 4 ASP B 135 ? ? -144.31 14.50 10 4 PRO B 147 ? ? -61.67 10.83 11 4 PHE B 183 ? ? -146.55 -29.86 12 4 ALA B 184 ? ? -143.63 54.88 13 4 TYR B 200 ? ? -143.46 -19.21 14 5 ASP B 135 ? ? -144.75 17.04 15 5 PRO B 147 ? ? -61.76 10.56 16 6 ASP B 135 ? ? -140.17 13.32 17 6 PRO B 147 ? ? -61.61 11.30 18 6 PHE B 183 ? ? -147.98 -34.55 19 7 GLN B 118 ? ? -158.93 -22.09 20 7 PRO B 147 ? ? -61.17 9.93 21 7 TYR B 200 ? ? -69.66 0.04 22 8 GLU B 121 ? ? -76.05 27.11 23 8 ASP B 135 ? ? -148.11 16.59 24 8 PRO B 147 ? ? -72.15 20.12 25 8 PHE B 183 ? ? -153.68 -32.25 26 9 HIS B 116 ? ? -152.76 3.15 27 9 GLU B 121 ? ? -73.24 27.80 28 9 ASP B 135 ? ? -148.77 15.28 29 9 PRO B 147 ? ? -61.33 8.53 30 9 PHE B 183 ? ? -153.16 -30.76 31 9 ALA B 184 ? ? -141.48 56.06 32 9 ALA B 197 ? ? 57.50 13.49 33 10 HIS B 115 ? ? -78.62 28.66 34 10 ASP B 135 ? ? -147.31 15.34 35 10 PRO B 147 ? ? -60.85 7.44 36 10 PRO B 196 ? ? -67.98 -168.81 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 C A 111 ? ? 0.071 'SIDE CHAIN' 2 8 C A 111 ? ? 0.062 'SIDE CHAIN' 3 8 A A 112 ? ? 0.060 'SIDE CHAIN' 4 10 C A 111 ? ? 0.098 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 7QDD _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7QDD _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.9 mM [U-15N] Npl3 RRM1, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N Npl3 RRM1' solution ? 2 '0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM1, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N 13C Npl3 RRM1' solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Npl3 RRM1' 0.9 ? mM '[U-15N]' 2 'Npl3 RRM1' 0.9 ? mM '[U-100% 13C; U-100% 15N]' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 0 _pdbx_nmr_exptl_sample_conditions.pH 6.9 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label standard _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-15N NOESY' 1 isotropic 2 1 2 '3D 1H-13C NOESY aliphatic' 1 isotropic 3 1 2 '3D 1H-13C NOESY aromatic' 1 isotropic 4 1 1 '2D NOESY' 2 isotropic 5 1 2 '2D NOESY F1fF2f' 3 isotropic 6 1 2 '2D NOESY F2f' 3 isotropic 7 1 2 '3D HNCACB' 2 isotropic # _pdbx_nmr_refine.entry_id 7QDD _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 GLN N N N N 146 GLN CA C N S 147 GLN C C N N 148 GLN O O N N 149 GLN CB C N N 150 GLN CG C N N 151 GLN CD C N N 152 GLN OE1 O N N 153 GLN NE2 N N N 154 GLN OXT O N N 155 GLN H H N N 156 GLN H2 H N N 157 GLN HA H N N 158 GLN HB2 H N N 159 GLN HB3 H N N 160 GLN HG2 H N N 161 GLN HG3 H N N 162 GLN HE21 H N N 163 GLN HE22 H N N 164 GLN HXT H N N 165 GLU N N N N 166 GLU CA C N S 167 GLU C C N N 168 GLU O O N N 169 GLU CB C N N 170 GLU CG C N N 171 GLU CD C N N 172 GLU OE1 O N N 173 GLU OE2 O N N 174 GLU OXT O N N 175 GLU H H N N 176 GLU H2 H N N 177 GLU HA H N N 178 GLU HB2 H N N 179 GLU HB3 H N N 180 GLU HG2 H N N 181 GLU HG3 H N N 182 GLU HE2 H N N 183 GLU HXT H N N 184 GLY N N N N 185 GLY CA C N N 186 GLY C C N N 187 GLY O O N N 188 GLY OXT O N N 189 GLY H H N N 190 GLY H2 H N N 191 GLY HA2 H N N 192 GLY HA3 H N N 193 GLY HXT H N N 194 HIS N N N N 195 HIS CA C N S 196 HIS C C N N 197 HIS O O N N 198 HIS CB C N N 199 HIS CG C Y N 200 HIS ND1 N Y N 201 HIS CD2 C Y N 202 HIS CE1 C Y N 203 HIS NE2 N Y N 204 HIS OXT O N N 205 HIS H H N N 206 HIS H2 H N N 207 HIS HA H N N 208 HIS HB2 H N N 209 HIS HB3 H N N 210 HIS HD1 H N N 211 HIS HD2 H N N 212 HIS HE1 H N N 213 HIS HE2 H N N 214 HIS HXT H N N 215 ILE N N N N 216 ILE CA C N S 217 ILE C C N N 218 ILE O O N N 219 ILE CB C N S 220 ILE CG1 C N N 221 ILE CG2 C N N 222 ILE CD1 C N N 223 ILE OXT O N N 224 ILE H H N N 225 ILE H2 H N N 226 ILE HA H N N 227 ILE HB H N N 228 ILE HG12 H N N 229 ILE HG13 H N N 230 ILE HG21 H N N 231 ILE HG22 H N N 232 ILE HG23 H N N 233 ILE HD11 H N N 234 ILE HD12 H N N 235 ILE HD13 H N N 236 ILE HXT H N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MET N N N N 285 MET CA C N S 286 MET C C N N 287 MET O O N N 288 MET CB C N N 289 MET CG C N N 290 MET SD S N N 291 MET CE C N N 292 MET OXT O N N 293 MET H H N N 294 MET H2 H N N 295 MET HA H N N 296 MET HB2 H N N 297 MET HB3 H N N 298 MET HG2 H N N 299 MET HG3 H N N 300 MET HE1 H N N 301 MET HE2 H N N 302 MET HE3 H N N 303 MET HXT H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 U OP3 O N N 400 U P P N N 401 U OP1 O N N 402 U OP2 O N N 403 U "O5'" O N N 404 U "C5'" C N N 405 U "C4'" C N R 406 U "O4'" O N N 407 U "C3'" C N S 408 U "O3'" O N N 409 U "C2'" C N R 410 U "O2'" O N N 411 U "C1'" C N R 412 U N1 N N N 413 U C2 C N N 414 U O2 O N N 415 U N3 N N N 416 U C4 C N N 417 U O4 O N N 418 U C5 C N N 419 U C6 C N N 420 U HOP3 H N N 421 U HOP2 H N N 422 U "H5'" H N N 423 U "H5''" H N N 424 U "H4'" H N N 425 U "H3'" H N N 426 U "HO3'" H N N 427 U "H2'" H N N 428 U "HO2'" H N N 429 U "H1'" H N N 430 U H3 H N N 431 U H5 H N N 432 U H6 H N N 433 VAL N N N N 434 VAL CA C N S 435 VAL C C N N 436 VAL O O N N 437 VAL CB C N N 438 VAL CG1 C N N 439 VAL CG2 C N N 440 VAL OXT O N N 441 VAL H H N N 442 VAL H2 H N N 443 VAL HA H N N 444 VAL HB H N N 445 VAL HG11 H N N 446 VAL HG12 H N N 447 VAL HG13 H N N 448 VAL HG21 H N N 449 VAL HG22 H N N 450 VAL HG23 H N N 451 VAL HXT H N N 452 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 THR N CA sing N N 350 THR N H sing N N 351 THR N H2 sing N N 352 THR CA C sing N N 353 THR CA CB sing N N 354 THR CA HA sing N N 355 THR C O doub N N 356 THR C OXT sing N N 357 THR CB OG1 sing N N 358 THR CB CG2 sing N N 359 THR CB HB sing N N 360 THR OG1 HG1 sing N N 361 THR CG2 HG21 sing N N 362 THR CG2 HG22 sing N N 363 THR CG2 HG23 sing N N 364 THR OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 U OP3 P sing N N 390 U OP3 HOP3 sing N N 391 U P OP1 doub N N 392 U P OP2 sing N N 393 U P "O5'" sing N N 394 U OP2 HOP2 sing N N 395 U "O5'" "C5'" sing N N 396 U "C5'" "C4'" sing N N 397 U "C5'" "H5'" sing N N 398 U "C5'" "H5''" sing N N 399 U "C4'" "O4'" sing N N 400 U "C4'" "C3'" sing N N 401 U "C4'" "H4'" sing N N 402 U "O4'" "C1'" sing N N 403 U "C3'" "O3'" sing N N 404 U "C3'" "C2'" sing N N 405 U "C3'" "H3'" sing N N 406 U "O3'" "HO3'" sing N N 407 U "C2'" "O2'" sing N N 408 U "C2'" "C1'" sing N N 409 U "C2'" "H2'" sing N N 410 U "O2'" "HO2'" sing N N 411 U "C1'" N1 sing N N 412 U "C1'" "H1'" sing N N 413 U N1 C2 sing N N 414 U N1 C6 sing N N 415 U C2 O2 doub N N 416 U C2 N3 sing N N 417 U N3 C4 sing N N 418 U N3 H3 sing N N 419 U C4 O4 doub N N 420 U C4 C5 sing N N 421 U C5 C6 doub N N 422 U C5 H5 sing N N 423 U C6 H6 sing N N 424 VAL N CA sing N N 425 VAL N H sing N N 426 VAL N H2 sing N N 427 VAL CA C sing N N 428 VAL CA CB sing N N 429 VAL CA HA sing N N 430 VAL C O doub N N 431 VAL C OXT sing N N 432 VAL CB CG1 sing N N 433 VAL CB CG2 sing N N 434 VAL CB HB sing N N 435 VAL CG1 HG11 sing N N 436 VAL CG1 HG12 sing N N 437 VAL CG1 HG13 sing N N 438 VAL CG2 HG21 sing N N 439 VAL CG2 HG22 sing N N 440 VAL CG2 HG23 sing N N 441 VAL OXT HXT sing N N 442 # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number 310030B-189379 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 900 ? 2 'AVANCE III HD' ? Bruker 700 ? 3 'AVANCE III HD' ? Bruker 600 ? # _atom_sites.entry_id 7QDD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_