HEADER TRANSCRIPTION 03-DEC-21 7QEK TITLE STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ANTIBIOTIC BIOSYNTHESIS TITLE 2 REGULATOR ADMX FROM THE RHIZOBACTERIUM SERRATIA PLYMUTHICA A153 BOUND TITLE 3 TO THE AUXIN INDOLE-3-PIRUVIC ACID (IPA). COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR ADMX; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: LIGAND BINDING DOMAIN OF ADMX SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA PLYMUTHICA; SOURCE 3 ORGANISM_TAXID: 82996; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSCRIPTION, TRANSCRIPTIONAL REGULATOR, ANDRIMID, ANTIBIOTIC, KEYWDS 2 SERRATIA PLYMUTHICA EXPDTA X-RAY DIFFRACTION AUTHOR J.A.GAVIRA,M.RICO-JIMENEZ,A.CASTELLVI,T.KRELL,M.A.MATILLA REVDAT 3 07-FEB-24 7QEK 1 REMARK REVDAT 2 28-JUN-23 7QEK 1 JRNL REVDAT 1 14-DEC-22 7QEK 0 JRNL AUTH J.A.GAVIRA,M.RICO-JIMENEZ,A.ORTEGA,N.V.PETUKHOVA,D.S.BUG, JRNL AUTH 2 A.CASTELLVI,Y.B.POROZOV,I.B.ZHULIN,T.KRELL,M.A.MATILLA JRNL TITL EMERGENCE OF AN AUXIN SENSING DOMAIN IN PLANT-ASSOCIATED JRNL TITL 2 BACTERIA. JRNL REF MBIO V. 14 36322 2023 JRNL REFN ESSN 2150-7511 JRNL PMID 36602305 JRNL DOI 10.1128/MBIO.03363-22 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 18452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.2600 - 4.0900 0.99 3091 168 0.1890 0.2249 REMARK 3 2 4.0900 - 3.2400 0.96 2861 144 0.1935 0.2283 REMARK 3 3 3.2400 - 2.8300 0.98 2895 149 0.2159 0.3101 REMARK 3 4 2.8300 - 2.5800 0.99 2907 143 0.2450 0.3330 REMARK 3 5 2.5800 - 2.3900 0.99 2892 151 0.2632 0.3457 REMARK 3 6 2.3900 - 2.2500 0.99 2907 144 0.2885 0.3540 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0986 -6.7916 12.2002 REMARK 3 T TENSOR REMARK 3 T11: 0.3021 T22: 0.3584 REMARK 3 T33: 0.3689 T12: -0.0260 REMARK 3 T13: -0.0141 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.0147 L22: 0.3799 REMARK 3 L33: 1.7888 L12: -0.5431 REMARK 3 L13: -0.6844 L23: -0.6322 REMARK 3 S TENSOR REMARK 3 S11: -0.1289 S12: 0.0489 S13: -0.0580 REMARK 3 S21: 0.0271 S22: 0.0656 S23: -0.0382 REMARK 3 S31: -0.1070 S32: 0.2236 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.8090 -6.9987 16.8024 REMARK 3 T TENSOR REMARK 3 T11: 0.4973 T22: 0.5348 REMARK 3 T33: 0.4989 T12: 0.0173 REMARK 3 T13: -0.0133 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.9938 L22: 0.4217 REMARK 3 L33: 1.1180 L12: -0.8136 REMARK 3 L13: 0.5984 L23: 0.3135 REMARK 3 S TENSOR REMARK 3 S11: 0.1225 S12: -0.1936 S13: 0.1249 REMARK 3 S21: -0.0916 S22: 0.0389 S23: 0.0386 REMARK 3 S31: -0.0038 S32: -0.4934 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.6333 -10.2061 19.0304 REMARK 3 T TENSOR REMARK 3 T11: 0.3470 T22: 0.3875 REMARK 3 T33: 0.3929 T12: -0.0099 REMARK 3 T13: -0.0590 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.6708 L22: 0.3586 REMARK 3 L33: 1.3088 L12: 1.0126 REMARK 3 L13: -0.0246 L23: -0.1034 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: 0.0344 S13: -0.1331 REMARK 3 S21: 0.0337 S22: -0.0047 S23: -0.0173 REMARK 3 S31: -0.1087 S32: -0.2567 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 206 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5643 -9.8978 4.0063 REMARK 3 T TENSOR REMARK 3 T11: 0.4013 T22: 0.3936 REMARK 3 T33: 0.3178 T12: -0.0624 REMARK 3 T13: 0.0606 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 0.7567 L22: 1.2170 REMARK 3 L33: 0.7867 L12: -1.6772 REMARK 3 L13: 0.2581 L23: -0.4287 REMARK 3 S TENSOR REMARK 3 S11: -0.1388 S12: 0.2340 S13: 0.0651 REMARK 3 S21: -0.1068 S22: -0.1003 S23: 0.0489 REMARK 3 S31: -0.0107 S32: 0.1500 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0553 -2.0799 34.8189 REMARK 3 T TENSOR REMARK 3 T11: 0.3711 T22: 0.3199 REMARK 3 T33: 0.3102 T12: 0.0061 REMARK 3 T13: -0.0341 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 1.6089 L22: 0.6184 REMARK 3 L33: 2.9682 L12: -0.6823 REMARK 3 L13: 0.8699 L23: 0.3033 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: -0.0663 S13: 0.0614 REMARK 3 S21: 0.0601 S22: -0.1180 S23: -0.0401 REMARK 3 S31: -0.2551 S32: -0.2041 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 122 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4922 -19.1414 29.8715 REMARK 3 T TENSOR REMARK 3 T11: 0.5089 T22: 0.6791 REMARK 3 T33: 0.4827 T12: 0.0939 REMARK 3 T13: -0.0819 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 0.8238 L22: 0.2302 REMARK 3 L33: 0.6167 L12: 0.0915 REMARK 3 L13: -0.4482 L23: -0.7946 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: -0.2699 S13: -0.1169 REMARK 3 S21: 0.1338 S22: 0.0078 S23: -0.0361 REMARK 3 S31: 0.0363 S32: 0.5171 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 168 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5645 -12.9462 36.8462 REMARK 3 T TENSOR REMARK 3 T11: 0.4105 T22: 0.2787 REMARK 3 T33: 0.4125 T12: -0.0398 REMARK 3 T13: -0.0106 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.9924 L22: -0.3416 REMARK 3 L33: 2.2892 L12: -0.7021 REMARK 3 L13: 0.3445 L23: 0.2248 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: -0.1618 S13: 0.0422 REMARK 3 S21: 0.0117 S22: 0.0652 S23: -0.0978 REMARK 3 S31: 0.1855 S32: -0.1486 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QEK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1292119528. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0-9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18502 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 94.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.97300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7QEJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL 0.1M PH 8.0, PEG 8000 30%, REMARK 280 COUNTER-DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.60650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.06700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.01800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.06700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.60650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.01800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 GLN A 22 REMARK 465 GLY A 23 REMARK 465 ILE A 24 REMARK 465 TYR A 25 REMARK 465 GLN A 26 REMARK 465 ASP A 27 REMARK 465 LEU A 28 REMARK 465 SER A 29 REMARK 465 ASN A 30 REMARK 465 LEU A 31 REMARK 465 ARG A 32 REMARK 465 LEU A 33 REMARK 465 LEU A 34 REMARK 465 ALA A 35 REMARK 465 ASP A 36 REMARK 465 ASN A 37 REMARK 465 LEU A 38 REMARK 465 ALA A 39 REMARK 465 ARG A 40 REMARK 465 ASP A 41 REMARK 465 TYR A 246 REMARK 465 PRO A 247 REMARK 465 GLY A 248 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 HIS B 20 REMARK 465 MET B 21 REMARK 465 GLN B 22 REMARK 465 GLY B 23 REMARK 465 ILE B 24 REMARK 465 TYR B 25 REMARK 465 GLN B 26 REMARK 465 ASP B 27 REMARK 465 LEU B 28 REMARK 465 SER B 29 REMARK 465 ASN B 30 REMARK 465 LEU B 31 REMARK 465 ARG B 32 REMARK 465 LEU B 33 REMARK 465 LEU B 34 REMARK 465 ALA B 35 REMARK 465 ASP B 36 REMARK 465 ASN B 37 REMARK 465 LEU B 38 REMARK 465 ALA B 39 REMARK 465 ARG B 40 REMARK 465 ASP B 41 REMARK 465 PRO B 42 REMARK 465 ARG B 43 REMARK 465 TYR B 246 REMARK 465 PRO B 247 REMARK 465 GLY B 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 123 OH TYR A 125 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 57 -44.35 -157.56 REMARK 500 ASN A 70 94.59 -160.02 REMARK 500 ASN A 70 94.59 -163.51 REMARK 500 SER B 57 -34.46 -157.55 REMARK 500 ASN B 72 47.55 -85.23 REMARK 500 ASP B 216 32.77 -86.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 169 OH REMARK 620 2 TYR B 169 OH 94.7 REMARK 620 N 1 DBREF 7QEK A 1 248 PDB 7QEK 7QEK 1 248 DBREF 7QEK B 1 248 PDB 7QEK 7QEK 1 248 SEQRES 1 A 248 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 248 LEU VAL PRO ARG GLY SER HIS MET GLN GLY ILE TYR GLN SEQRES 3 A 248 ASP LEU SER ASN LEU ARG LEU LEU ALA ASP ASN LEU ALA SEQRES 4 A 248 ARG ASP PRO ARG ALA LYS PHE THR LEU GLY CYS LEU PRO SEQRES 5 A 248 CYS LEU GLY LEU SER LEU VAL PRO GLU ILE ALA THR ASP SEQRES 6 A 248 PHE TYR GLN GLN ASN SER ASN LEU VAL MET THR LEU THR SEQRES 7 A 248 ALA GLU HIS THR GLU THR LEU VAL LYS LYS LEU ASP LEU SEQRES 8 A 248 ARG GLU ILE ASP LEU ALA LEU THR MET GLN PRO VAL GLN SEQRES 9 A 248 GLN GLY ASP ILE MET ALA THR LEU ILE ALA GLU VAL PRO SEQRES 10 A 248 LEU VAL TYR VAL ASP LYS ASP TYR ARG GLN GLY ALA VAL SEQRES 11 A 248 GLU ILE ASP SER ILE ASP GLN GLN ARG TRP ILE SER PRO SEQRES 12 A 248 GLY LEU ASP SER LEU SER THR ALA ILE ALA ALA HIS ARG SEQRES 13 A 248 VAL PHE PRO ALA THR GLY LEU ASN VAL GLU THR CYS TYR SEQRES 14 A 248 MET ALA MET GLU PHE VAL LYS ARG GLY VAL GLY CYS CYS SEQRES 15 A 248 ILE THR ASP ILE PHE SER ALA ARG HIS SER LEU THR PRO SEQRES 16 A 248 GLU MET ILE HIS GLN ILE SER PRO PRO MET LYS ILE ASP SEQRES 17 A 248 LEU TYR LEU LEU ARG ARG ALA ASP ALA SER LEU SER PRO SEQRES 18 A 248 VAL THR GLN LYS PHE VAL ASP PHE LEU CYS LYS ARG LEU SEQRES 19 A 248 ARG ASN GLU LEU ARG GLU ILE ASN LEU GLU LEU TYR PRO SEQRES 20 A 248 GLY SEQRES 1 B 248 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 248 LEU VAL PRO ARG GLY SER HIS MET GLN GLY ILE TYR GLN SEQRES 3 B 248 ASP LEU SER ASN LEU ARG LEU LEU ALA ASP ASN LEU ALA SEQRES 4 B 248 ARG ASP PRO ARG ALA LYS PHE THR LEU GLY CYS LEU PRO SEQRES 5 B 248 CYS LEU GLY LEU SER LEU VAL PRO GLU ILE ALA THR ASP SEQRES 6 B 248 PHE TYR GLN GLN ASN SER ASN LEU VAL MET THR LEU THR SEQRES 7 B 248 ALA GLU HIS THR GLU THR LEU VAL LYS LYS LEU ASP LEU SEQRES 8 B 248 ARG GLU ILE ASP LEU ALA LEU THR MET GLN PRO VAL GLN SEQRES 9 B 248 GLN GLY ASP ILE MET ALA THR LEU ILE ALA GLU VAL PRO SEQRES 10 B 248 LEU VAL TYR VAL ASP LYS ASP TYR ARG GLN GLY ALA VAL SEQRES 11 B 248 GLU ILE ASP SER ILE ASP GLN GLN ARG TRP ILE SER PRO SEQRES 12 B 248 GLY LEU ASP SER LEU SER THR ALA ILE ALA ALA HIS ARG SEQRES 13 B 248 VAL PHE PRO ALA THR GLY LEU ASN VAL GLU THR CYS TYR SEQRES 14 B 248 MET ALA MET GLU PHE VAL LYS ARG GLY VAL GLY CYS CYS SEQRES 15 B 248 ILE THR ASP ILE PHE SER ALA ARG HIS SER LEU THR PRO SEQRES 16 B 248 GLU MET ILE HIS GLN ILE SER PRO PRO MET LYS ILE ASP SEQRES 17 B 248 LEU TYR LEU LEU ARG ARG ALA ASP ALA SER LEU SER PRO SEQRES 18 B 248 VAL THR GLN LYS PHE VAL ASP PHE LEU CYS LYS ARG LEU SEQRES 19 B 248 ARG ASN GLU LEU ARG GLU ILE ASN LEU GLU LEU TYR PRO SEQRES 20 B 248 GLY HET 3IO A 301 15 HET MG A 302 1 HET 3IO B 301 15 HETNAM 3IO 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID HETNAM MG MAGNESIUM ION FORMUL 3 3IO 2(C11 H9 N O3) FORMUL 4 MG MG 2+ FORMUL 6 HOH *30(H2 O) HELIX 1 AA1 LEU A 51 LEU A 56 1 6 HELIX 2 AA2 SER A 57 ASN A 70 1 14 HELIX 3 AA3 HIS A 81 LEU A 91 1 11 HELIX 4 AA4 ASP A 133 ILE A 135 5 3 HELIX 5 AA5 ASP A 136 TRP A 140 5 5 HELIX 6 AA6 LEU A 145 ARG A 156 1 12 HELIX 7 AA7 THR A 167 ARG A 177 1 11 HELIX 8 AA8 ILE A 186 LEU A 193 1 8 HELIX 9 AA9 THR A 194 GLU A 196 5 3 HELIX 10 AB1 SER A 220 GLU A 244 1 25 HELIX 11 AB2 LEU B 51 LEU B 56 1 6 HELIX 12 AB3 SER B 57 ASN B 70 1 14 HELIX 13 AB4 HIS B 81 LEU B 91 1 11 HELIX 14 AB5 ASP B 133 ILE B 135 5 3 HELIX 15 AB6 ASP B 136 ARG B 139 5 4 HELIX 16 AB7 ASP B 146 ARG B 156 1 11 HELIX 17 AB8 THR B 167 ARG B 177 1 11 HELIX 18 AB9 ILE B 186 LEU B 193 1 8 HELIX 19 AC1 THR B 194 GLU B 196 5 3 HELIX 20 AC2 SER B 220 GLU B 244 1 25 SHEET 1 AA1 4 VAL A 130 GLU A 131 0 SHEET 2 AA1 4 ILE A 198 SER A 202 1 O SER A 202 N VAL A 130 SHEET 3 AA1 4 ILE A 108 VAL A 121 -1 N TYR A 120 O HIS A 199 SHEET 4 AA1 4 CYS A 182 ASP A 185 -1 O THR A 184 N VAL A 119 SHEET 1 AA2 9 VAL A 130 GLU A 131 0 SHEET 2 AA2 9 ILE A 198 SER A 202 1 O SER A 202 N VAL A 130 SHEET 3 AA2 9 ILE A 108 VAL A 121 -1 N TYR A 120 O HIS A 199 SHEET 4 AA2 9 LYS A 206 ARG A 214 -1 O ILE A 207 N VAL A 116 SHEET 5 AA2 9 LEU A 96 THR A 99 -1 N ALA A 97 O LEU A 212 SHEET 6 AA2 9 ALA A 44 CYS A 50 1 N GLY A 49 O LEU A 96 SHEET 7 AA2 9 LEU A 73 ALA A 79 1 O THR A 76 N LEU A 48 SHEET 8 AA2 9 LEU B 163 VAL B 165 1 O ASN B 164 N MET A 75 SHEET 9 AA2 9 ILE B 141 SER B 142 1 N SER B 142 O VAL B 165 SHEET 1 AA3 8 LEU A 163 VAL A 165 0 SHEET 2 AA3 8 VAL B 74 ALA B 79 1 O MET B 75 N ASN A 164 SHEET 3 AA3 8 LYS B 45 CYS B 50 1 N LEU B 48 O THR B 76 SHEET 4 AA3 8 LEU B 96 THR B 99 1 O LEU B 96 N GLY B 49 SHEET 5 AA3 8 LYS B 206 ARG B 214 -1 O LEU B 212 N ALA B 97 SHEET 6 AA3 8 ILE B 108 VAL B 121 -1 N VAL B 116 O ILE B 207 SHEET 7 AA3 8 ILE B 198 SER B 202 -1 O HIS B 199 N TYR B 120 SHEET 8 AA3 8 VAL B 130 GLU B 131 1 N VAL B 130 O GLN B 200 SHEET 1 AA4 7 LEU A 163 VAL A 165 0 SHEET 2 AA4 7 VAL B 74 ALA B 79 1 O MET B 75 N ASN A 164 SHEET 3 AA4 7 LYS B 45 CYS B 50 1 N LEU B 48 O THR B 76 SHEET 4 AA4 7 LEU B 96 THR B 99 1 O LEU B 96 N GLY B 49 SHEET 5 AA4 7 LYS B 206 ARG B 214 -1 O LEU B 212 N ALA B 97 SHEET 6 AA4 7 ILE B 108 VAL B 121 -1 N VAL B 116 O ILE B 207 SHEET 7 AA4 7 CYS B 182 ASP B 185 -1 O THR B 184 N VAL B 119 LINK OH TYR A 169 MG MG A 302 1555 1555 2.81 LINK MG MG A 302 OH TYR B 169 1555 1555 2.89 CISPEP 1 SER A 202 PRO A 203 0 -4.23 CISPEP 2 SER B 202 PRO B 203 0 -2.59 CRYST1 53.213 76.036 94.134 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018792 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013152 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010623 0.00000