HEADER TRANSFERASE 16-DEC-21 7QIU TITLE YSGA 23S RNA METHYLTRANSFERASE FROM BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RRNA METHYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: B4122_3537, B4122_3803, B4417_0535; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 23S RNA METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.LABAR,D.VAN ELDER,M.ROOVERS,L.DROOGMANS REVDAT 3 07-FEB-24 7QIU 1 REMARK REVDAT 2 24-MAY-23 7QIU 1 JRNL REVDAT 1 28-DEC-22 7QIU 0 JRNL AUTH M.ROOVERS,G.LABAR,P.WOLFF,A.FELLER,D.VAN ELDER,R.SOIN, JRNL AUTH 2 C.GUEYDAN,V.KRUYS,L.DROOGMANS JRNL TITL THE BACILLUS SUBTILIS OPEN READING FRAME YSGA ENCODES THE JRNL TITL 2 SPOUT METHYLTRANSFERASE RLMP FORMING 2'- O -METHYLGUANOSINE JRNL TITL 3 AT POSITION 2553 IN THE A-LOOP OF 23S RRNA. JRNL REF RNA V. 28 1185 2022 JRNL REFN ESSN 1469-9001 JRNL PMID 35710145 JRNL DOI 10.1261/RNA.079131.122 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8490 - 4.8249 1.00 2786 148 0.1715 0.1846 REMARK 3 2 4.8249 - 3.8303 1.00 2667 139 0.1329 0.1657 REMARK 3 3 3.8303 - 3.3463 1.00 2648 140 0.1546 0.1675 REMARK 3 4 3.3463 - 3.0404 1.00 2606 138 0.1793 0.1963 REMARK 3 5 3.0404 - 2.8225 1.00 2608 137 0.1947 0.2392 REMARK 3 6 2.8225 - 2.6561 1.00 2585 136 0.1948 0.2215 REMARK 3 7 2.6561 - 2.5231 1.00 2623 136 0.2092 0.2691 REMARK 3 8 2.5231 - 2.4133 1.00 2582 137 0.2170 0.2489 REMARK 3 9 2.4133 - 2.3204 1.00 2568 136 0.2229 0.2602 REMARK 3 10 2.3204 - 2.2403 1.00 2568 135 0.2229 0.2517 REMARK 3 11 2.2403 - 2.1703 1.00 2592 135 0.2308 0.2717 REMARK 3 12 2.1703 - 2.1082 1.00 2573 136 0.2233 0.2361 REMARK 3 13 2.1082 - 2.0527 1.00 2571 135 0.2348 0.2371 REMARK 3 14 2.0527 - 2.0026 1.00 2584 137 0.2365 0.2555 REMARK 3 15 2.0026 - 1.9571 1.00 2545 134 0.2709 0.3061 REMARK 3 16 1.9571 - 1.9155 1.00 2546 133 0.2925 0.3182 REMARK 3 17 1.9155 - 1.8772 0.96 2502 131 0.3402 0.3572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8848 30.4552 120.2147 REMARK 3 T TENSOR REMARK 3 T11: 0.4471 T22: 0.2852 REMARK 3 T33: 0.2978 T12: -0.0891 REMARK 3 T13: 0.0083 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 4.2323 L22: 5.4754 REMARK 3 L33: 4.1295 L12: 1.5759 REMARK 3 L13: 1.3944 L23: 0.8000 REMARK 3 S TENSOR REMARK 3 S11: 0.2535 S12: -0.1994 S13: -0.1135 REMARK 3 S21: 0.8117 S22: -0.3188 S23: -0.1947 REMARK 3 S31: 0.2380 S32: 0.1214 S33: 0.0771 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6781 31.3545 120.8561 REMARK 3 T TENSOR REMARK 3 T11: 0.4638 T22: 0.2853 REMARK 3 T33: 0.3589 T12: -0.1101 REMARK 3 T13: -0.0635 T23: 0.0704 REMARK 3 L TENSOR REMARK 3 L11: 8.8204 L22: 6.3153 REMARK 3 L33: 8.1624 L12: -0.2695 REMARK 3 L13: 0.2965 L23: 2.4700 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: 0.1669 S13: 0.1406 REMARK 3 S21: 0.6712 S22: -0.0807 S23: -0.8333 REMARK 3 S31: 0.2161 S32: 0.4261 S33: -0.0748 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8783 35.6120 100.9013 REMARK 3 T TENSOR REMARK 3 T11: 0.2475 T22: 0.3007 REMARK 3 T33: 0.2960 T12: -0.0094 REMARK 3 T13: 0.0707 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 2.2589 L22: 2.0651 REMARK 3 L33: 6.8088 L12: 0.0537 REMARK 3 L13: 3.6611 L23: -1.6896 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.2359 S13: 0.0918 REMARK 3 S21: 0.3254 S22: -0.0155 S23: 0.2269 REMARK 3 S31: -0.0491 S32: -0.5112 S33: 0.0469 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8640 32.7181 100.7332 REMARK 3 T TENSOR REMARK 3 T11: 0.2012 T22: 0.2930 REMARK 3 T33: 0.1859 T12: -0.0229 REMARK 3 T13: 0.0413 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.9508 L22: 4.9437 REMARK 3 L33: 5.8351 L12: 2.2360 REMARK 3 L13: 2.3606 L23: 0.8555 REMARK 3 S TENSOR REMARK 3 S11: 0.3338 S12: -0.2567 S13: -0.0406 REMARK 3 S21: 0.3143 S22: -0.1369 S23: 0.0496 REMARK 3 S31: 0.3175 S32: -0.3720 S33: -0.2268 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0610 40.7112 85.0657 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.4333 REMARK 3 T33: 0.3571 T12: 0.0604 REMARK 3 T13: -0.0581 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.9176 L22: 8.9688 REMARK 3 L33: 7.9130 L12: 0.9694 REMARK 3 L13: -4.0243 L23: -4.7452 REMARK 3 S TENSOR REMARK 3 S11: 0.2548 S12: 0.5175 S13: 0.2893 REMARK 3 S21: -0.6341 S22: -0.1307 S23: 0.2737 REMARK 3 S31: -0.1701 S32: -0.5999 S33: -0.1684 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6714 35.4819 84.0073 REMARK 3 T TENSOR REMARK 3 T11: 0.3376 T22: 0.2715 REMARK 3 T33: 0.2490 T12: 0.0160 REMARK 3 T13: -0.0397 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 6.4571 L22: 1.7663 REMARK 3 L33: 4.0492 L12: 1.5205 REMARK 3 L13: -1.6813 L23: -1.3679 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: 0.3640 S13: -0.1847 REMARK 3 S21: -0.4230 S22: -0.0098 S23: 0.2192 REMARK 3 S31: 0.3449 S32: -0.5039 S33: 0.0148 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3972 20.3080 81.3046 REMARK 3 T TENSOR REMARK 3 T11: 0.4194 T22: 0.4701 REMARK 3 T33: 0.3270 T12: 0.1554 REMARK 3 T13: -0.0248 T23: -0.0734 REMARK 3 L TENSOR REMARK 3 L11: 6.3096 L22: 8.9629 REMARK 3 L33: 2.8828 L12: -3.4946 REMARK 3 L13: 1.0217 L23: 0.0320 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: -0.3083 S13: 0.5332 REMARK 3 S21: 0.0425 S22: 0.0579 S23: -0.4893 REMARK 3 S31: -0.0525 S32: 0.0317 S33: -0.0193 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7778 19.9438 76.6058 REMARK 3 T TENSOR REMARK 3 T11: 0.4492 T22: 0.4129 REMARK 3 T33: 0.3799 T12: 0.0880 REMARK 3 T13: -0.0330 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 2.4211 L22: 4.6411 REMARK 3 L33: 1.5404 L12: -4.3290 REMARK 3 L13: 0.5719 L23: -0.2139 REMARK 3 S TENSOR REMARK 3 S11: 0.2850 S12: 0.0072 S13: -0.1057 REMARK 3 S21: -0.5974 S22: -0.0543 S23: 0.0945 REMARK 3 S31: 0.0621 S32: -0.1611 S33: -0.2777 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2989 46.1076 85.4095 REMARK 3 T TENSOR REMARK 3 T11: 0.2963 T22: 0.3061 REMARK 3 T33: 0.2897 T12: -0.0064 REMARK 3 T13: 0.0213 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 2.3853 L22: 3.7591 REMARK 3 L33: 3.5609 L12: -0.9211 REMARK 3 L13: -1.1860 L23: 1.1184 REMARK 3 S TENSOR REMARK 3 S11: 0.1881 S12: -0.0746 S13: 0.2288 REMARK 3 S21: 0.0208 S22: 0.0899 S23: -0.3159 REMARK 3 S31: -0.2871 S32: 0.4692 S33: -0.2745 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QIU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1292119714. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980109 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46483 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.877 REMARK 200 RESOLUTION RANGE LOW (A) : 45.849 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 15.48 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 15.24 REMARK 200 R MERGE FOR SHELL (I) : 1.25500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KZK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350 2%, MES 200MM PH 5.5, REMARK 280 MICROBATCH, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.44000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.80000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.22500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.80000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.44000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.22500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 84 CB CG CD OE1 OE2 REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 62 CG OD1 OD2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 LYS B 99 CG CD CE NZ REMARK 470 GLN B 185 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 376 O HOH A 407 1.82 REMARK 500 O HOH A 511 O HOH A 544 1.87 REMARK 500 O HOH B 430 O HOH B 520 1.87 REMARK 500 O HOH A 306 O HOH A 397 1.92 REMARK 500 O HOH B 496 O HOH B 536 1.93 REMARK 500 O HOH A 451 O HOH A 531 1.97 REMARK 500 O HOH A 542 O HOH B 505 2.02 REMARK 500 O HOH A 525 O HOH B 524 2.04 REMARK 500 O HOH B 352 O HOH B 523 2.04 REMARK 500 O HOH B 450 O HOH B 461 2.05 REMARK 500 O HOH A 306 O HOH A 334 2.06 REMARK 500 O HOH A 362 O HOH A 490 2.09 REMARK 500 O HOH A 319 O HOH A 418 2.09 REMARK 500 O HOH A 504 O HOH B 383 2.15 REMARK 500 O HOH B 464 O HOH B 511 2.17 REMARK 500 O HOH A 486 O HOH A 525 2.18 REMARK 500 O HOH A 373 O HOH A 490 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 496 O HOH A 548 3546 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 85 107.33 -52.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 551 DISTANCE = 6.50 ANGSTROMS DBREF1 7QIU A 1 248 UNP A0A164ZSS2_BACIU DBREF2 7QIU A A0A164ZSS2 1 248 DBREF1 7QIU B 1 248 UNP A0A164ZSS2_BACIU DBREF2 7QIU B A0A164ZSS2 1 248 SEQADV 7QIU MET A -19 UNP A0A164ZSS INITIATING METHIONINE SEQADV 7QIU GLY A -18 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER A -17 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER A -16 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -15 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -14 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -13 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -12 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -11 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A -10 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER A -9 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER A -8 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU GLY A -7 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU LEU A -6 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU VAL A -5 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU PRO A -4 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU ARG A -3 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU GLY A -2 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER A -1 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS A 0 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU MET B -19 UNP A0A164ZSS INITIATING METHIONINE SEQADV 7QIU GLY B -18 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER B -17 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER B -16 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -15 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -14 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -13 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -12 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -11 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B -10 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER B -9 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER B -8 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU GLY B -7 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU LEU B -6 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU VAL B -5 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU PRO B -4 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU ARG B -3 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU GLY B -2 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU SER B -1 UNP A0A164ZSS EXPRESSION TAG SEQADV 7QIU HIS B 0 UNP A0A164ZSS EXPRESSION TAG SEQRES 1 A 268 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 268 LEU VAL PRO ARG GLY SER HIS MET LYS GLN ILE GLU SER SEQRES 3 A 268 ALA LYS ASN GLN LYS VAL LYS ASP TRP LYS LYS LEU HIS SEQRES 4 A 268 THR LYS LYS GLU ARG THR LYS THR ASN THR PHE LEU ILE SEQRES 5 A 268 GLU GLY GLU HIS LEU VAL GLU GLU ALA LEU LYS SER PRO SEQRES 6 A 268 GLY ILE VAL LYS GLU ILE LEU VAL LYS ASP GLU THR ARG SEQRES 7 A 268 ILE PRO SER ASP LEU GLU THR GLY ILE GLN CYS TYR MET SEQRES 8 A 268 LEU SER GLU ASP ALA PHE SER ALA VAL THR GLU THR GLU SEQRES 9 A 268 THR PRO GLN GLN ILE ALA ALA VAL CYS HIS MET PRO GLU SEQRES 10 A 268 GLU LYS LEU ALA THR ALA ARG LYS VAL LEU LEU ILE ASP SEQRES 11 A 268 ALA VAL GLN ASP PRO GLY ASN LEU GLY THR MET ILE ARG SEQRES 12 A 268 THR ALA ASP ALA ALA GLY LEU ASP ALA VAL VAL LEU GLY SEQRES 13 A 268 ASP GLY THR ALA ASP ALA PHE ASN GLY LYS THR LEU ARG SEQRES 14 A 268 SER ALA GLN GLY SER HIS PHE HIS ILE PRO VAL VAL ARG SEQRES 15 A 268 ARG ASN LEU PRO SER TYR VAL ASP GLU LEU LYS ALA GLU SEQRES 16 A 268 GLY VAL LYS VAL TYR GLY THR ALA LEU GLN ASN GLY ALA SEQRES 17 A 268 PRO TYR GLN GLU ILE PRO GLN SER GLU SER PHE ALA LEU SEQRES 18 A 268 ILE VAL GLY ASN GLU GLY ALA GLY VAL ASP ALA ALA LEU SEQRES 19 A 268 LEU GLU LYS THR ASP LEU ASN LEU TYR VAL PRO LEU TYR SEQRES 20 A 268 GLY GLN ALA GLU SER LEU ASN VAL ALA VAL ALA ALA ALA SEQRES 21 A 268 ILE LEU VAL TYR HIS LEU ARG GLY SEQRES 1 B 268 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 268 LEU VAL PRO ARG GLY SER HIS MET LYS GLN ILE GLU SER SEQRES 3 B 268 ALA LYS ASN GLN LYS VAL LYS ASP TRP LYS LYS LEU HIS SEQRES 4 B 268 THR LYS LYS GLU ARG THR LYS THR ASN THR PHE LEU ILE SEQRES 5 B 268 GLU GLY GLU HIS LEU VAL GLU GLU ALA LEU LYS SER PRO SEQRES 6 B 268 GLY ILE VAL LYS GLU ILE LEU VAL LYS ASP GLU THR ARG SEQRES 7 B 268 ILE PRO SER ASP LEU GLU THR GLY ILE GLN CYS TYR MET SEQRES 8 B 268 LEU SER GLU ASP ALA PHE SER ALA VAL THR GLU THR GLU SEQRES 9 B 268 THR PRO GLN GLN ILE ALA ALA VAL CYS HIS MET PRO GLU SEQRES 10 B 268 GLU LYS LEU ALA THR ALA ARG LYS VAL LEU LEU ILE ASP SEQRES 11 B 268 ALA VAL GLN ASP PRO GLY ASN LEU GLY THR MET ILE ARG SEQRES 12 B 268 THR ALA ASP ALA ALA GLY LEU ASP ALA VAL VAL LEU GLY SEQRES 13 B 268 ASP GLY THR ALA ASP ALA PHE ASN GLY LYS THR LEU ARG SEQRES 14 B 268 SER ALA GLN GLY SER HIS PHE HIS ILE PRO VAL VAL ARG SEQRES 15 B 268 ARG ASN LEU PRO SER TYR VAL ASP GLU LEU LYS ALA GLU SEQRES 16 B 268 GLY VAL LYS VAL TYR GLY THR ALA LEU GLN ASN GLY ALA SEQRES 17 B 268 PRO TYR GLN GLU ILE PRO GLN SER GLU SER PHE ALA LEU SEQRES 18 B 268 ILE VAL GLY ASN GLU GLY ALA GLY VAL ASP ALA ALA LEU SEQRES 19 B 268 LEU GLU LYS THR ASP LEU ASN LEU TYR VAL PRO LEU TYR SEQRES 20 B 268 GLY GLN ALA GLU SER LEU ASN VAL ALA VAL ALA ALA ALA SEQRES 21 B 268 ILE LEU VAL TYR HIS LEU ARG GLY FORMUL 3 HOH *540(H2 O) HELIX 1 AA1 ASN A 9 LYS A 17 1 9 HELIX 2 AA2 THR A 20 ASN A 28 1 9 HELIX 3 AA3 GLY A 34 SER A 44 1 11 HELIX 4 AA4 ASP A 55 ILE A 59 5 5 HELIX 5 AA5 SER A 73 GLU A 82 1 10 HELIX 6 AA6 ASP A 114 ALA A 128 1 15 HELIX 7 AA7 ASN A 144 GLN A 152 1 9 HELIX 8 AA8 GLY A 153 HIS A 157 5 5 HELIX 9 AA9 ASN A 164 GLU A 175 1 12 HELIX 10 AB1 GLN A 191 ILE A 193 5 3 HELIX 11 AB2 ASP A 211 GLU A 216 1 6 HELIX 12 AB3 ASN A 234 GLY A 248 1 15 HELIX 13 AB4 ASN B 9 LEU B 18 1 10 HELIX 14 AB5 THR B 20 ASN B 28 1 9 HELIX 15 AB6 GLY B 34 SER B 44 1 11 HELIX 16 AB7 ASP B 55 ILE B 59 5 5 HELIX 17 AB8 SER B 73 THR B 81 1 9 HELIX 18 AB9 ASP B 114 ALA B 128 1 15 HELIX 19 AC1 ASN B 144 ALA B 151 1 8 HELIX 20 AC2 GLY B 153 HIS B 157 5 5 HELIX 21 AC3 ASN B 164 GLU B 175 1 12 HELIX 22 AC4 GLN B 191 ILE B 193 5 3 HELIX 23 AC5 ASP B 211 THR B 218 1 8 HELIX 24 AC6 ASN B 234 GLY B 248 1 15 SHEET 1 AA1 5 LYS A 2 ILE A 4 0 SHEET 2 AA1 5 GLN A 68 LEU A 72 1 O MET A 71 N LYS A 2 SHEET 3 AA1 5 VAL A 48 VAL A 53 1 N VAL A 53 O LEU A 72 SHEET 4 AA1 5 ILE A 89 HIS A 94 -1 O ALA A 90 N LEU A 52 SHEET 5 AA1 5 THR A 29 GLU A 33 -1 N PHE A 30 O CYS A 93 SHEET 1 AA2 7 VAL A 160 ARG A 162 0 SHEET 2 AA2 7 ALA A 132 LEU A 135 1 N LEU A 135 O VAL A 161 SHEET 3 AA2 7 LYS A 105 ASP A 110 1 N LEU A 107 O VAL A 134 SHEET 4 AA2 7 PHE A 199 GLY A 204 1 O LEU A 201 N LEU A 108 SHEET 5 AA2 7 LYS A 178 THR A 182 1 N TYR A 180 O ALA A 200 SHEET 6 AA2 7 LEU A 220 TYR A 223 1 O LEU A 222 N GLY A 181 SHEET 7 AA2 7 ALA A 188 PRO A 189 1 N ALA A 188 O ASN A 221 SHEET 1 AA3 5 LYS B 2 ILE B 4 0 SHEET 2 AA3 5 GLN B 68 LEU B 72 1 O MET B 71 N LYS B 2 SHEET 3 AA3 5 VAL B 48 VAL B 53 1 N VAL B 53 O LEU B 72 SHEET 4 AA3 5 ILE B 89 HIS B 94 -1 O VAL B 92 N LYS B 49 SHEET 5 AA3 5 THR B 29 GLU B 33 -1 N PHE B 30 O CYS B 93 SHEET 1 AA4 7 VAL B 160 ARG B 162 0 SHEET 2 AA4 7 ALA B 132 LEU B 135 1 N LEU B 135 O VAL B 161 SHEET 3 AA4 7 LYS B 105 ASP B 110 1 N ILE B 109 O VAL B 134 SHEET 4 AA4 7 PHE B 199 GLY B 204 1 O VAL B 203 N ASP B 110 SHEET 5 AA4 7 VAL B 179 THR B 182 1 N TYR B 180 O ALA B 200 SHEET 6 AA4 7 LEU B 220 TYR B 223 1 O LEU B 222 N GLY B 181 SHEET 7 AA4 7 GLY B 187 PRO B 189 1 N ALA B 188 O TYR B 223 CRYST1 64.880 66.450 129.600 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015413 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007716 0.00000