HEADER HYDROLASE 17-DEC-21 7QJP TITLE CRYSTAL STRUCTURE OF A CUTINASE ENZYME FROM SACCHAROPOLYSPORA FLAVA TITLE 2 (611) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUTINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROPOLYSPORA FLAVA; SOURCE 3 ORGANISM_TAXID: 95161; SOURCE 4 GENE: SAMN05660874_00127; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLASTIC DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,L.AVILAN,G.T.BECKHAM,J.E.MCGEEHAN REVDAT 3 24-APR-24 7QJP 1 REMARK DBREF SEQADV HELIX REVDAT 3 2 1 SHEET SSBOND ATOM REVDAT 2 31-JAN-24 7QJP 1 REMARK REVDAT 1 28-DEC-22 7QJP 0 JRNL AUTH E.ERICKSON,J.E.GADO,L.AVILAN,F.BRATTI,R.K.BRIZENDINE, JRNL AUTH 2 P.A.COX,R.GILL,R.GRAHAM,D.J.KIM,G.KONIG,W.E.MICHENER, JRNL AUTH 3 S.POUDEL,K.J.RAMIREZ,T.J.SHAKESPEARE,M.ZAHN,E.S.BOYD, JRNL AUTH 4 C.M.PAYNE,J.L.DUBOIS,A.R.PICKFORD,G.T.BECKHAM,J.E.MCGEEHAN JRNL TITL SOURCING THERMOTOLERANT POLY(ETHYLENE TEREPHTHALATE) JRNL TITL 2 HYDROLASE SCAFFOLDS FROM NATURAL DIVERSITY JRNL REF NAT COMMUN V. 13 7850 2022 JRNL REFN ESSN 2041-1723 JRNL DOI 10.1038/S41467-022-35237-X REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.7 REMARK 3 NUMBER OF REFLECTIONS : 40562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.884 REMARK 3 FREE R VALUE TEST SET COUNT : 1981 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 509 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 15.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1949 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 314 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01300 REMARK 3 B22 (A**2) : 0.01300 REMARK 3 B33 (A**2) : -0.04300 REMARK 3 B12 (A**2) : 0.00700 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.066 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2039 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1826 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2795 ; 2.013 ; 1.653 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4253 ; 1.617 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 266 ; 6.804 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;34.092 ;23.814 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 297 ;11.036 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 8.956 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 279 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2344 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 432 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 391 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 23 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1020 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 233 ; 0.237 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1037 ; 1.170 ; 1.470 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1036 ; 1.118 ; 1.468 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1297 ; 1.761 ; 2.200 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1298 ; 1.768 ; 2.201 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1002 ; 1.886 ; 1.652 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1003 ; 1.885 ; 1.656 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1493 ; 2.738 ; 2.411 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1494 ; 2.737 ; 2.413 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 262 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8150 38.3597 -18.4699 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: 0.0096 REMARK 3 T33: 0.0038 T12: 0.0088 REMARK 3 T13: 0.0029 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.4783 L22: 1.2670 REMARK 3 L33: 1.1105 L12: -0.2585 REMARK 3 L13: -0.3487 L23: 0.1200 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: -0.0076 S13: -0.0521 REMARK 3 S21: -0.0524 S22: -0.0019 S23: -0.0278 REMARK 3 S31: 0.0895 S32: 0.0315 S33: 0.0298 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7QJP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1292118059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8153 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40562 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.561 REMARK 200 RESOLUTION RANGE LOW (A) : 77.367 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 17.40 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.15300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1JFR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG 3350, 0.2 M SODIUM FLUORIDE, REMARK 280 0.1 M BIS-TRIS PROPANE PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 649 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASN A 248 O HOH A 401 1.06 REMARK 500 N ASN A 248 O HOH A 401 1.96 REMARK 500 O HOH A 585 O HOH A 629 1.96 REMARK 500 O HOH A 585 O HOH A 639 1.98 REMARK 500 OD1 ASP A 216 O HOH A 402 2.00 REMARK 500 O HOH A 502 O HOH A 641 2.00 REMARK 500 O HOH A 414 O HOH A 651 2.01 REMARK 500 O HOH A 412 O HOH A 639 2.06 REMARK 500 O HOH A 472 O HOH A 607 2.08 REMARK 500 O HOH A 408 O HOH A 621 2.09 REMARK 500 OE2 GLU A 14 O HOH A 403 2.11 REMARK 500 O ASP A 6 O HOH A 404 2.12 REMARK 500 O HOH A 425 O HOH A 544 2.12 REMARK 500 OE1 GLU A 14 O HOH A 405 2.18 REMARK 500 O HOH A 408 O HOH A 478 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 463 O HOH A 463 4555 2.04 REMARK 500 O HOH A 415 O HOH A 634 4554 2.08 REMARK 500 O HOH A 523 O HOH A 613 3565 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 14 CD GLU A 14 OE2 -0.092 REMARK 500 GLU A 15 CD GLU A 15 OE1 0.108 REMARK 500 GLU A 15 CD GLU A 15 OE2 0.080 REMARK 500 GLU A 69 CD GLU A 69 OE2 0.070 REMARK 500 ASP A 216 CG ASP A 216 OD2 0.212 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 21 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 21 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ASP A 216 CB - CG - OD1 ANGL. DEV. = -8.3 DEGREES REMARK 500 ASP A 216 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 132 -120.18 63.47 REMARK 500 THR A 155 59.01 38.67 REMARK 500 HIS A 186 -85.89 -124.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 714 DISTANCE = 5.95 ANGSTROMS DBREF1 7QJP A 2 261 UNP A0A1I6NU60_9PSEU DBREF2 7QJP A A0A1I6NU60 34 293 SEQADV 7QJP MET A 1 UNP A0A1I6NU6 INITIATING METHIONINE SEQADV 7QJP LEU A 262 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP GLU A 263 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 264 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 265 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 266 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 267 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 268 UNP A0A1I6NU6 EXPRESSION TAG SEQADV 7QJP HIS A 269 UNP A0A1I6NU6 EXPRESSION TAG SEQRES 1 A 269 MET ALA GLU PRO ALA ASP VAL HIS GLY PRO ASP PRO THR SEQRES 2 A 269 GLU GLU SER ILE THR ALA PRO ARG GLY PRO PHE GLU VAL SEQRES 3 A 269 ASP GLU GLU SER VAL SER ARG LEU SER VAL SER GLY PHE SEQRES 4 A 269 GLY GLY GLY THR ILE TYR TYR PRO THR ASP THR THR ASP SEQRES 5 A 269 GLY LEU PHE SER ALA VAL SER ILE SER PRO GLY PHE THR SEQRES 6 A 269 GLY THR GLN GLU THR MET ALA TRP TYR GLY PRO ARG LEU SEQRES 7 A 269 ALA SER GLN GLY PHE VAL VAL PHE THR ILE ASP THR ILE SEQRES 8 A 269 THR THR THR ASP GLN PRO ASP SER ARG ALA ARG GLN LEU SEQRES 9 A 269 GLN ALA SER LEU ASP TYR LEU VAL ASN ASP SER ASP VAL SEQRES 10 A 269 LYS ASP ILE ILE ASP PRO ALA ARG LEU GLY VAL MET GLY SEQRES 11 A 269 HIS SER MET GLY GLY GLY GLY SER LEU LYS ALA ALA LEU SEQRES 12 A 269 ASP ASN PRO ALA LEU LYS ALA ALA ILE PRO LEU THR PRO SEQRES 13 A 269 TRP HIS THR THR LYS ASP PHE SER GLY VAL GLN THR PRO SEQRES 14 A 269 THR LEU ILE ILE GLY ALA GLN ASN ASP THR VAL ALA PRO SEQRES 15 A 269 VAL SER GLN HIS ALA LYS PRO PHE TYR GLU SER LEU PRO SEQRES 16 A 269 ASP ASP PRO GLY LYS ALA TYR LEU GLU LEU ALA GLY ALA SEQRES 17 A 269 SER HIS LEU ALA PRO ASN THR ASP ASN THR THR ILE ALA SEQRES 18 A 269 LYS PHE SER ILE ALA TRP LEU LYS ARG PHE LEU ASP ASP SEQRES 19 A 269 ASP THR ARG TYR ASP GLN PHE LEU CYS PRO PRO PRO GLU SEQRES 20 A 269 ASN ASP ASP SER ILE SER ASP TYR GLN SER THR CYS PRO SEQRES 21 A 269 TYR LEU GLU HIS HIS HIS HIS HIS HIS HET PG4 A 301 31 HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 2 PG4 C8 H18 O5 FORMUL 3 HOH *314(H2 O) HELIX 1 AA1 THR A 13 ALA A 19 1 7 HELIX 2 AA2 SER A 32 VAL A 36 5 5 HELIX 3 AA3 THR A 67 ALA A 72 5 6 HELIX 4 AA4 TRP A 73 SER A 80 1 8 HELIX 5 AA5 GLN A 96 ASP A 114 1 19 HELIX 6 AA6 VAL A 117 ASP A 119 5 3 HELIX 7 AA7 SER A 132 ASN A 145 1 14 HELIX 8 AA8 HIS A 186 LEU A 194 1 9 HELIX 9 AA9 LEU A 211 THR A 215 5 5 HELIX 10 AB1 ASN A 217 ASP A 233 1 17 HELIX 11 AB2 ASP A 235 ARG A 237 5 3 HELIX 12 AB3 TYR A 238 CYS A 243 1 6 SHEET 1 AA1 6 VAL A 26 VAL A 31 0 SHEET 2 AA1 6 GLY A 42 PRO A 47 -1 O GLY A 42 N VAL A 31 SHEET 3 AA1 6 VAL A 84 ILE A 88 -1 O VAL A 85 N TYR A 45 SHEET 4 AA1 6 PHE A 55 SER A 61 1 N VAL A 58 O PHE A 86 SHEET 5 AA1 6 ILE A 121 HIS A 131 1 O ASP A 122 N PHE A 55 SHEET 6 AA1 6 ALA A 150 LEU A 154 1 O LEU A 154 N GLY A 130 SHEET 1 AA2 3 THR A 170 ALA A 175 0 SHEET 2 AA2 3 LYS A 200 LEU A 205 1 O LEU A 205 N GLY A 174 SHEET 3 AA2 3 ILE A 252 SER A 257 -1 O ASP A 254 N GLU A 204 SSBOND 1 CYS A 243 CYS A 259 1555 1555 2.03 CISPEP 1 ASP A 197 PRO A 198 0 1.22 CISPEP 2 CYS A 243 PRO A 244 0 -9.86 CISPEP 3 CYS A 259 PRO A 260 0 -8.42 CRYST1 89.336 89.336 74.324 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011194 0.006463 0.000000 0.00000 SCALE2 0.000000 0.012925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013455 0.00000