HEADER REPLICATION 23-DEC-21 7QNZ TITLE HUMAN LIG1-DNA-PCNA COMPLEX RECONSTITUTED IN ABSENCE OF ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA LIGASE I,POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP] 1; COMPND 5 EC: 6.5.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 9 CHAIN: B, C, D; COMPND 10 SYNONYM: PCNA,CYCLIN; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: OLIGO19DDC; COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: OLIGO13P; COMPND 18 CHAIN: I; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: OLIGO32; COMPND 22 CHAIN: J; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PCNA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630; SOURCE 23 MOL_ID: 5; SOURCE 24 SYNTHETIC: YES; SOURCE 25 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 26 ORGANISM_TAXID: 32630 KEYWDS DNA, REPLICATION, COMPLEX, LIGASE, PCNA, LIGATION, OKAZAKI FRAGMENT KEYWDS 2 MATURATION EXPDTA ELECTRON MICROSCOPY AUTHOR K.BLAIR,M.TEHSEEN,V.S.RADUCANU,T.SHAHID,C.LANCEY,R.CRUEHET,S.HAMDAN, AUTHOR 2 A.DE BIASIO REVDAT 1 11-JAN-23 7QNZ 0 JRNL AUTH K.BLAIR,M.TEHSEEN,V.S.RADUCANU,T.SHAHID,C.LANCEY,F.RASHID, JRNL AUTH 2 R.CREUHET,S.M.HAMDAN,A.DE BIASIO JRNL TITL MECHANISM OF HUMAN LIG1 REGULATION BY PCNA IN OKAZAKI JRNL TITL 2 FRAGMENT SEALING. JRNL REF NAT COMMUN V. 13 7833 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36539424 JRNL DOI 10.1038/S41467-022-35475-Z REMARK 2 REMARK 2 RESOLUTION. 4.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CTFFIND, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.580 REMARK 3 NUMBER OF PARTICLES : 73886 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7QNZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292119911. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN LIGASE HOLOENZYME WITHOUT REMARK 245 ATP PRESENT REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : THE GRID WAS COATED WITH REMARK 245 GRAPHENE OXIDE PRIOR TO USE. REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2966 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ARG A 3 REMARK 465 SER A 4 REMARK 465 ILE A 5 REMARK 465 MET A 6 REMARK 465 SER A 7 REMARK 465 PHE A 8 REMARK 465 PHE A 9 REMARK 465 HIS A 10 REMARK 465 PRO A 11 REMARK 465 LYS A 12 REMARK 465 LYS A 13 REMARK 465 GLU A 14 REMARK 465 GLY A 15 REMARK 465 LYS A 16 REMARK 465 ALA A 17 REMARK 465 LYS A 18 REMARK 465 LYS A 19 REMARK 465 PRO A 20 REMARK 465 GLU A 21 REMARK 465 LYS A 22 REMARK 465 GLU A 23 REMARK 465 ALA A 24 REMARK 465 SER A 25 REMARK 465 ASN A 26 REMARK 465 SER A 27 REMARK 465 SER A 28 REMARK 465 ARG A 29 REMARK 465 GLU A 30 REMARK 465 THR A 31 REMARK 465 GLU A 32 REMARK 465 PRO A 33 REMARK 465 PRO A 34 REMARK 465 PRO A 35 REMARK 465 LYS A 36 REMARK 465 ALA A 37 REMARK 465 ALA A 38 REMARK 465 LEU A 39 REMARK 465 LYS A 40 REMARK 465 GLU A 41 REMARK 465 TRP A 42 REMARK 465 ASN A 43 REMARK 465 GLY A 44 REMARK 465 VAL A 45 REMARK 465 VAL A 46 REMARK 465 SER A 47 REMARK 465 GLU A 48 REMARK 465 SER A 49 REMARK 465 ASP A 50 REMARK 465 SER A 51 REMARK 465 PRO A 52 REMARK 465 VAL A 53 REMARK 465 LYS A 54 REMARK 465 ARG A 55 REMARK 465 PRO A 56 REMARK 465 GLY A 57 REMARK 465 ARG A 58 REMARK 465 LYS A 59 REMARK 465 ALA A 60 REMARK 465 ALA A 61 REMARK 465 ARG A 62 REMARK 465 VAL A 63 REMARK 465 LEU A 64 REMARK 465 GLY A 65 REMARK 465 SER A 66 REMARK 465 GLU A 67 REMARK 465 GLY A 68 REMARK 465 GLU A 69 REMARK 465 GLU A 70 REMARK 465 GLU A 71 REMARK 465 ASP A 72 REMARK 465 GLU A 73 REMARK 465 ALA A 74 REMARK 465 LEU A 75 REMARK 465 SER A 76 REMARK 465 PRO A 77 REMARK 465 ALA A 78 REMARK 465 LYS A 79 REMARK 465 GLY A 80 REMARK 465 GLN A 81 REMARK 465 LYS A 82 REMARK 465 PRO A 83 REMARK 465 ALA A 84 REMARK 465 LEU A 85 REMARK 465 ASP A 86 REMARK 465 CYS A 87 REMARK 465 SER A 88 REMARK 465 GLN A 89 REMARK 465 VAL A 90 REMARK 465 SER A 91 REMARK 465 PRO A 92 REMARK 465 PRO A 93 REMARK 465 ARG A 94 REMARK 465 PRO A 95 REMARK 465 ALA A 96 REMARK 465 THR A 97 REMARK 465 SER A 98 REMARK 465 PRO A 99 REMARK 465 GLU A 100 REMARK 465 ASN A 101 REMARK 465 ASN A 102 REMARK 465 ALA A 103 REMARK 465 SER A 104 REMARK 465 LEU A 105 REMARK 465 SER A 106 REMARK 465 ASP A 107 REMARK 465 THR A 108 REMARK 465 SER A 109 REMARK 465 PRO A 110 REMARK 465 MET A 111 REMARK 465 ASP A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 PRO A 115 REMARK 465 SER A 116 REMARK 465 GLY A 117 REMARK 465 ILE A 118 REMARK 465 PRO A 119 REMARK 465 LYS A 120 REMARK 465 ARG A 121 REMARK 465 ARG A 122 REMARK 465 THR A 123 REMARK 465 ALA A 124 REMARK 465 ARG A 125 REMARK 465 LYS A 126 REMARK 465 GLN A 127 REMARK 465 LEU A 128 REMARK 465 PRO A 129 REMARK 465 LYS A 130 REMARK 465 ARG A 131 REMARK 465 THR A 132 REMARK 465 ILE A 133 REMARK 465 GLN A 134 REMARK 465 GLU A 135 REMARK 465 VAL A 136 REMARK 465 LEU A 137 REMARK 465 GLU A 138 REMARK 465 GLU A 139 REMARK 465 GLN A 140 REMARK 465 SER A 141 REMARK 465 GLU A 142 REMARK 465 ASP A 143 REMARK 465 GLU A 144 REMARK 465 ASP A 145 REMARK 465 ARG A 146 REMARK 465 GLU A 147 REMARK 465 ALA A 148 REMARK 465 LYS A 149 REMARK 465 ARG A 150 REMARK 465 LYS A 151 REMARK 465 LYS A 152 REMARK 465 GLU A 153 REMARK 465 GLU A 154 REMARK 465 GLU A 155 REMARK 465 GLU A 156 REMARK 465 GLU A 157 REMARK 465 GLU A 158 REMARK 465 THR A 159 REMARK 465 PRO A 160 REMARK 465 LYS A 161 REMARK 465 GLU A 162 REMARK 465 SER A 163 REMARK 465 LEU A 164 REMARK 465 THR A 165 REMARK 465 GLU A 166 REMARK 465 ALA A 167 REMARK 465 GLU A 168 REMARK 465 VAL A 169 REMARK 465 ALA A 170 REMARK 465 THR A 171 REMARK 465 GLU A 172 REMARK 465 LYS A 173 REMARK 465 GLU A 174 REMARK 465 GLY A 175 REMARK 465 GLU A 176 REMARK 465 ASP A 177 REMARK 465 GLY A 178 REMARK 465 ASP A 179 REMARK 465 GLN A 180 REMARK 465 PRO A 181 REMARK 465 THR A 182 REMARK 465 THR A 183 REMARK 465 PRO A 184 REMARK 465 PRO A 185 REMARK 465 LYS A 186 REMARK 465 PRO A 187 REMARK 465 LEU A 188 REMARK 465 LYS A 189 REMARK 465 THR A 190 REMARK 465 SER A 191 REMARK 465 LYS A 192 REMARK 465 ALA A 193 REMARK 465 GLU A 194 REMARK 465 THR A 195 REMARK 465 PRO A 196 REMARK 465 THR A 197 REMARK 465 GLU A 198 REMARK 465 SER A 199 REMARK 465 VAL A 200 REMARK 465 SER A 201 REMARK 465 GLU A 202 REMARK 465 PRO A 203 REMARK 465 GLU A 204 REMARK 465 VAL A 205 REMARK 465 ALA A 206 REMARK 465 THR A 207 REMARK 465 LYS A 208 REMARK 465 GLN A 209 REMARK 465 GLU A 210 REMARK 465 LEU A 211 REMARK 465 GLN A 212 REMARK 465 GLU A 213 REMARK 465 GLU A 214 REMARK 465 GLU A 215 REMARK 465 GLU A 216 REMARK 465 GLN A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 PRO A 220 REMARK 465 PRO A 221 REMARK 465 ARG A 222 REMARK 465 ARG A 223 REMARK 465 ALA A 224 REMARK 465 PRO A 225 REMARK 465 LYS A 226 REMARK 465 THR A 227 REMARK 465 LEU A 228 REMARK 465 SER A 229 REMARK 465 SER A 230 REMARK 465 PHE A 231 REMARK 465 PHE A 232 REMARK 465 THR A 233 REMARK 465 PRO A 234 REMARK 465 ARG A 235 REMARK 465 LYS A 236 REMARK 465 PRO A 237 REMARK 465 ALA A 238 REMARK 465 VAL A 239 REMARK 465 LYS A 240 REMARK 465 LYS A 241 REMARK 465 GLU A 242 REMARK 465 VAL A 243 REMARK 465 LYS A 244 REMARK 465 GLU A 245 REMARK 465 GLU A 246 REMARK 465 GLU A 247 REMARK 465 PRO A 248 REMARK 465 GLY A 249 REMARK 465 ALA A 250 REMARK 465 PRO A 251 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 GLU A 254 REMARK 465 GLY A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 257 REMARK 465 GLU A 258 REMARK 465 GLY A 259 REMARK 465 PRO A 260 REMARK 465 LEU A 261 REMARK 465 GLN A 902 REMARK 465 ILE A 903 REMARK 465 GLN A 904 REMARK 465 ASN A 905 REMARK 465 GLN A 906 REMARK 465 GLN A 907 REMARK 465 GLY A 908 REMARK 465 GLU A 909 REMARK 465 ASP A 910 REMARK 465 SER A 911 REMARK 465 GLY A 912 REMARK 465 SER A 913 REMARK 465 ASP A 914 REMARK 465 PRO A 915 REMARK 465 GLU A 916 REMARK 465 ASP A 917 REMARK 465 THR A 918 REMARK 465 TYR A 919 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 HIS B 0 REMARK 465 ASN B 107 REMARK 465 GLN B 108 REMARK 465 ASN B 187 REMARK 465 VAL B 188 REMARK 465 ASP B 189 REMARK 465 LYS B 190 REMARK 465 GLU B 256 REMARK 465 ASP B 257 REMARK 465 GLU B 258 REMARK 465 GLU B 259 REMARK 465 GLY B 260 REMARK 465 SER B 261 REMARK 465 GLY C -2 REMARK 465 PRO C -1 REMARK 465 HIS C 0 REMARK 465 ASN C 107 REMARK 465 GLN C 108 REMARK 465 SER C 186 REMARK 465 ASN C 187 REMARK 465 VAL C 188 REMARK 465 ASP C 189 REMARK 465 LYS C 190 REMARK 465 GLU C 256 REMARK 465 ASP C 257 REMARK 465 GLU C 258 REMARK 465 GLU C 259 REMARK 465 GLY C 260 REMARK 465 SER C 261 REMARK 465 GLY D -2 REMARK 465 PRO D -1 REMARK 465 HIS D 0 REMARK 465 ASP D 189 REMARK 465 LYS D 190 REMARK 465 GLU D 256 REMARK 465 ASP D 257 REMARK 465 GLU D 258 REMARK 465 GLU D 259 REMARK 465 GLY D 260 REMARK 465 SER D 261 REMARK 465 DC I 32 REMARK 465 DG J 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 627 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 628 CG CD OE1 OE2 REMARK 470 ARG A 643 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 644 CG CD CE NZ REMARK 470 GLU A 645 CG CD OE1 OE2 REMARK 470 VAL A 646 CG1 CG2 REMARK 470 GLU A 709 CG CD OE1 OE2 REMARK 470 GLU A 712 CG CD OE1 OE2 REMARK 470 GLU A 807 CG CD OE1 OE2 REMARK 470 ARG A 859 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 899 CG CD CE NZ REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 ASP B 232 CG OD1 OD2 REMARK 470 GLU C 109 CG CD OE1 OE2 REMARK 470 LYS C 164 CG CD CE NZ REMARK 470 GLU C 191 CG CD OE1 OE2 REMARK 470 GLU C 198 CG CD OE1 OE2 REMARK 470 ARG C 210 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 232 CG OD1 OD2 REMARK 470 ILE C 255 CG1 CG2 CD1 REMARK 470 ASN D 107 CG OD1 ND2 REMARK 470 GLN D 108 CG CD OE1 NE2 REMARK 470 GLU D 109 CG CD OE1 OE2 REMARK 470 ASP D 165 CG OD1 OD2 REMARK 470 SER D 186 OG REMARK 470 ASN D 187 CG OD1 ND2 REMARK 470 GLU D 191 CG CD OE1 OE2 REMARK 470 GLU D 198 CG CD OE1 OE2 REMARK 470 ASP D 232 CG OD1 OD2 REMARK 470 ILE D 255 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG H 17 O3' DT H 18 P -0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 387 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 449 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 451 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 492 NE - CZ - NH2 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 549 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 549 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 TYR A 567 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 573 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 641 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 677 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 TYR A 783 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 TYR A 823 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 879 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 5 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 146 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 53 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 TYR C 250 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 TYR D 60 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG D 61 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG D 149 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT H 4 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT H 4 C6 - C5 - C7 ANGL. DEV. = -4.8 DEGREES REMARK 500 DC H 5 N1 - C2 - O2 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT H 6 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DT H 8 C4' - C3' - C2' ANGL. DEV. = -4.4 DEGREES REMARK 500 DT H 8 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG H 9 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG H 9 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DC H 10 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT H 11 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG H 12 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA H 13 C4 - C5 - C6 ANGL. DEV. = -3.6 DEGREES REMARK 500 DA H 13 N1 - C6 - N6 ANGL. DEV. = -4.4 DEGREES REMARK 500 DG H 15 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC H 16 N1 - C2 - O2 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG H 17 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT I 21 C6 - C5 - C7 ANGL. DEV. = -4.3 DEGREES REMARK 500 DC I 22 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I 22 N3 - C4 - C5 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG I 24 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA I 25 C4 - C5 - C6 ANGL. DEV. = -3.3 DEGREES REMARK 500 DA I 25 C5 - C6 - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DA I 25 N1 - C6 - N6 ANGL. DEV. = -4.7 DEGREES REMARK 500 DT I 27 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA I 29 C4 - C5 - C6 ANGL. DEV. = -3.6 DEGREES REMARK 500 DA I 29 C5 - C6 - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA I 30 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA I 30 C4 - C5 - C6 ANGL. DEV. = -3.4 DEGREES REMARK 500 DA I 30 C5 - C6 - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 DC I 31 N1 - C2 - O2 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 88 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 384 -144.07 -71.22 REMARK 500 ASN A 385 -104.06 61.82 REMARK 500 THR A 389 10.16 53.91 REMARK 500 ALA A 418 12.44 55.96 REMARK 500 SER A 437 31.24 -151.81 REMARK 500 VAL A 481 -30.81 -137.91 REMARK 500 PRO A 511 64.67 -66.12 REMARK 500 ASP A 512 117.77 -160.21 REMARK 500 ASP A 570 41.63 -88.14 REMARK 500 SER A 588 -178.29 -67.82 REMARK 500 THR A 639 0.34 -65.94 REMARK 500 ARG A 643 -70.69 -92.31 REMARK 500 ILE A 651 109.20 -37.27 REMARK 500 ASN A 666 -17.28 59.78 REMARK 500 ASP A 728 -58.64 -144.25 REMARK 500 PRO A 838 21.89 -68.41 REMARK 500 ALA A 858 18.59 56.09 REMARK 500 THR B 73 -71.98 -64.94 REMARK 500 GLU B 174 36.96 -69.22 REMARK 500 GLU B 198 74.66 -119.37 REMARK 500 ASP B 243 5.98 57.34 REMARK 500 ASP C 232 -14.21 63.22 REMARK 500 ASP C 243 -17.18 60.44 REMARK 500 ARG D 61 55.91 -156.50 REMARK 500 GLN D 108 1.10 59.02 REMARK 500 PRO D 202 108.39 -57.67 REMARK 500 MET D 244 -31.75 -143.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 273 0.10 SIDE CHAIN REMARK 500 ARG A 307 0.09 SIDE CHAIN REMARK 500 ARG A 409 0.08 SIDE CHAIN REMARK 500 TYR A 783 0.08 SIDE CHAIN REMARK 500 ARG A 874 0.16 SIDE CHAIN REMARK 500 TYR D 211 0.08 SIDE CHAIN REMARK 500 DT H 3 0.10 SIDE CHAIN REMARK 500 DT H 8 0.08 SIDE CHAIN REMARK 500 DC I 26 0.06 SIDE CHAIN REMARK 500 DT J 2 0.11 SIDE CHAIN REMARK 500 DT J 7 0.07 SIDE CHAIN REMARK 500 DG J 13 0.07 SIDE CHAIN REMARK 500 DG J 30 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-14078 RELATED DB: EMDB REMARK 900 HUMAN LIG1-DNA-PCNA COMPLEX RECONSTITUTED IN ABSENCE OF ATP DBREF 7QNZ A 1 919 UNP P18858 DNLI1_HUMAN 1 919 DBREF 7QNZ B 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QNZ C 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QNZ D 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QNZ H 1 19 PDB 7QNZ 7QNZ 1 19 DBREF 7QNZ I 20 32 PDB 7QNZ 7QNZ 20 32 DBREF 7QNZ J 0 31 PDB 7QNZ 7QNZ 0 31 SEQADV 7QNZ GLY B -2 UNP P12004 EXPRESSION TAG SEQADV 7QNZ PRO B -1 UNP P12004 EXPRESSION TAG SEQADV 7QNZ HIS B 0 UNP P12004 EXPRESSION TAG SEQADV 7QNZ GLY C -2 UNP P12004 EXPRESSION TAG SEQADV 7QNZ PRO C -1 UNP P12004 EXPRESSION TAG SEQADV 7QNZ HIS C 0 UNP P12004 EXPRESSION TAG SEQADV 7QNZ GLY D -2 UNP P12004 EXPRESSION TAG SEQADV 7QNZ PRO D -1 UNP P12004 EXPRESSION TAG SEQADV 7QNZ HIS D 0 UNP P12004 EXPRESSION TAG SEQRES 1 A 919 MET GLN ARG SER ILE MET SER PHE PHE HIS PRO LYS LYS SEQRES 2 A 919 GLU GLY LYS ALA LYS LYS PRO GLU LYS GLU ALA SER ASN SEQRES 3 A 919 SER SER ARG GLU THR GLU PRO PRO PRO LYS ALA ALA LEU SEQRES 4 A 919 LYS GLU TRP ASN GLY VAL VAL SER GLU SER ASP SER PRO SEQRES 5 A 919 VAL LYS ARG PRO GLY ARG LYS ALA ALA ARG VAL LEU GLY SEQRES 6 A 919 SER GLU GLY GLU GLU GLU ASP GLU ALA LEU SER PRO ALA SEQRES 7 A 919 LYS GLY GLN LYS PRO ALA LEU ASP CYS SER GLN VAL SER SEQRES 8 A 919 PRO PRO ARG PRO ALA THR SER PRO GLU ASN ASN ALA SER SEQRES 9 A 919 LEU SER ASP THR SER PRO MET ASP SER SER PRO SER GLY SEQRES 10 A 919 ILE PRO LYS ARG ARG THR ALA ARG LYS GLN LEU PRO LYS SEQRES 11 A 919 ARG THR ILE GLN GLU VAL LEU GLU GLU GLN SER GLU ASP SEQRES 12 A 919 GLU ASP ARG GLU ALA LYS ARG LYS LYS GLU GLU GLU GLU SEQRES 13 A 919 GLU GLU THR PRO LYS GLU SER LEU THR GLU ALA GLU VAL SEQRES 14 A 919 ALA THR GLU LYS GLU GLY GLU ASP GLY ASP GLN PRO THR SEQRES 15 A 919 THR PRO PRO LYS PRO LEU LYS THR SER LYS ALA GLU THR SEQRES 16 A 919 PRO THR GLU SER VAL SER GLU PRO GLU VAL ALA THR LYS SEQRES 17 A 919 GLN GLU LEU GLN GLU GLU GLU GLU GLN THR LYS PRO PRO SEQRES 18 A 919 ARG ARG ALA PRO LYS THR LEU SER SER PHE PHE THR PRO SEQRES 19 A 919 ARG LYS PRO ALA VAL LYS LYS GLU VAL LYS GLU GLU GLU SEQRES 20 A 919 PRO GLY ALA PRO GLY LYS GLU GLY ALA ALA GLU GLY PRO SEQRES 21 A 919 LEU ASP PRO SER GLY TYR ASN PRO ALA LYS ASN ASN TYR SEQRES 22 A 919 HIS PRO VAL GLU ASP ALA CYS TRP LYS PRO GLY GLN LYS SEQRES 23 A 919 VAL PRO TYR LEU ALA VAL ALA ARG THR PHE GLU LYS ILE SEQRES 24 A 919 GLU GLU VAL SER ALA ARG LEU ARG MET VAL GLU THR LEU SEQRES 25 A 919 SER ASN LEU LEU ARG SER VAL VAL ALA LEU SER PRO PRO SEQRES 26 A 919 ASP LEU LEU PRO VAL LEU TYR LEU SER LEU ASN HIS LEU SEQRES 27 A 919 GLY PRO PRO GLN GLN GLY LEU GLU LEU GLY VAL GLY ASP SEQRES 28 A 919 GLY VAL LEU LEU LYS ALA VAL ALA GLN ALA THR GLY ARG SEQRES 29 A 919 GLN LEU GLU SER VAL ARG ALA GLU ALA ALA GLU LYS GLY SEQRES 30 A 919 ASP VAL GLY LEU VAL ALA GLU ASN SER ARG SER THR GLN SEQRES 31 A 919 ARG LEU MET LEU PRO PRO PRO PRO LEU THR ALA SER GLY SEQRES 32 A 919 VAL PHE SER LYS PHE ARG ASP ILE ALA ARG LEU THR GLY SEQRES 33 A 919 SER ALA SER THR ALA LYS LYS ILE ASP ILE ILE LYS GLY SEQRES 34 A 919 LEU PHE VAL ALA CYS ARG HIS SER GLU ALA ARG PHE ILE SEQRES 35 A 919 ALA ARG SER LEU SER GLY ARG LEU ARG LEU GLY LEU ALA SEQRES 36 A 919 GLU GLN SER VAL LEU ALA ALA LEU SER GLN ALA VAL SER SEQRES 37 A 919 LEU THR PRO PRO GLY GLN GLU PHE PRO PRO ALA MET VAL SEQRES 38 A 919 ASP ALA GLY LYS GLY LYS THR ALA GLU ALA ARG LYS THR SEQRES 39 A 919 TRP LEU GLU GLU GLN GLY MET ILE LEU LYS GLN THR PHE SEQRES 40 A 919 CYS GLU VAL PRO ASP LEU ASP ARG ILE ILE PRO VAL LEU SEQRES 41 A 919 LEU GLU HIS GLY LEU GLU ARG LEU PRO GLU HIS CYS LYS SEQRES 42 A 919 LEU SER PRO GLY ILE PRO LEU LYS PRO MET LEU ALA HIS SEQRES 43 A 919 PRO THR ARG GLY ILE SER GLU VAL LEU LYS ARG PHE GLU SEQRES 44 A 919 GLU ALA ALA PHE THR CYS GLU TYR LYS TYR ASP GLY GLN SEQRES 45 A 919 ARG ALA GLN ILE HIS ALA LEU GLU GLY GLY GLU VAL LYS SEQRES 46 A 919 ILE PHE SER ARG ASN GLN GLU ASP ASN THR GLY LYS TYR SEQRES 47 A 919 PRO ASP ILE ILE SER ARG ILE PRO LYS ILE LYS LEU PRO SEQRES 48 A 919 SER VAL THR SER PHE ILE LEU ASP THR GLU ALA VAL ALA SEQRES 49 A 919 TRP ASP ARG GLU LYS LYS GLN ILE GLN PRO PHE GLN VAL SEQRES 50 A 919 LEU THR THR ARG LYS ARG LYS GLU VAL ASP ALA SER GLU SEQRES 51 A 919 ILE GLN VAL GLN VAL CYS LEU TYR ALA PHE ASP LEU ILE SEQRES 52 A 919 TYR LEU ASN GLY GLU SER LEU VAL ARG GLU PRO LEU SER SEQRES 53 A 919 ARG ARG ARG GLN LEU LEU ARG GLU ASN PHE VAL GLU THR SEQRES 54 A 919 GLU GLY GLU PHE VAL PHE ALA THR SER LEU ASP THR LYS SEQRES 55 A 919 ASP ILE GLU GLN ILE ALA GLU PHE LEU GLU GLN SER VAL SEQRES 56 A 919 LYS ASP SER CYS GLU GLY LEU MET VAL LYS THR LEU ASP SEQRES 57 A 919 VAL ASP ALA THR TYR GLU ILE ALA LYS ARG SER HIS ASN SEQRES 58 A 919 TRP LEU LYS LEU LYS LYS ASP TYR LEU ASP GLY VAL GLY SEQRES 59 A 919 ASP THR LEU ASP LEU VAL VAL ILE GLY ALA TYR LEU GLY SEQRES 60 A 919 ARG GLY LYS ARG ALA GLY ARG TYR GLY GLY PHE LEU LEU SEQRES 61 A 919 ALA SER TYR ASP GLU ASP SER GLU GLU LEU GLN ALA ILE SEQRES 62 A 919 CYS LYS LEU GLY THR GLY PHE SER ASP GLU GLU LEU GLU SEQRES 63 A 919 GLU HIS HIS GLN SER LEU LYS ALA LEU VAL LEU PRO SER SEQRES 64 A 919 PRO ARG PRO TYR VAL ARG ILE ASP GLY ALA VAL ILE PRO SEQRES 65 A 919 ASP HIS TRP LEU ASP PRO SER ALA VAL TRP GLU VAL LYS SEQRES 66 A 919 CYS ALA ASP LEU SER LEU SER PRO ILE TYR PRO ALA ALA SEQRES 67 A 919 ARG GLY LEU VAL ASP SER ASP LYS GLY ILE SER LEU ARG SEQRES 68 A 919 PHE PRO ARG PHE ILE ARG VAL ARG GLU ASP LYS GLN PRO SEQRES 69 A 919 GLU GLN ALA THR THR SER ALA GLN VAL ALA CYS LEU TYR SEQRES 70 A 919 ARG LYS GLN SER GLN ILE GLN ASN GLN GLN GLY GLU ASP SEQRES 71 A 919 SER GLY SER ASP PRO GLU ASP THR TYR SEQRES 1 B 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 B 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 B 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 B 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 B 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 B 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 B 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 B 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 B 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 B 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 B 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 B 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 B 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 B 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 B 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 B 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 B 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 B 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 B 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 B 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 B 264 GLU GLU GLY SER SEQRES 1 C 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 C 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 C 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 C 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 C 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 C 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 C 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 C 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 C 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 C 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 C 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 C 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 C 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 C 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 C 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 C 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 C 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 C 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 C 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 C 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 C 264 GLU GLU GLY SER SEQRES 1 D 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 D 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 D 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 D 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 D 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 D 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 D 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 D 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 D 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 D 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 D 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 D 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 D 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 D 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 D 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 D 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 D 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 D 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 D 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 D 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 D 264 GLU GLU GLY SER SEQRES 1 H 19 DG DC DT DT DC DT DG DT DG DC DT DG DA SEQRES 2 H 19 DT DG DC DG DT DOC SEQRES 1 I 13 DG DT DC DG DG DA DC DT DG DA DA DC DC SEQRES 1 J 32 DG DG DT DT DC DA DG DT DC DC DG DA DC SEQRES 2 J 32 DG DA DC DG DC DA DT DC DA DG DC DA DC SEQRES 3 J 32 DA DG DA DA DG DC HET DOC H 19 18 HET AMP I 100 23 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 DOC C9 H14 N3 O6 P FORMUL 8 AMP C10 H14 N5 O7 P HELIX 1 AA1 ASP A 262 TYR A 266 5 5 HELIX 2 AA2 PRO A 288 VAL A 302 1 15 HELIX 3 AA3 ALA A 304 SER A 323 1 20 HELIX 4 AA4 ASP A 326 LEU A 335 1 10 HELIX 5 AA5 PRO A 340 GLY A 344 5 5 HELIX 6 AA6 GLY A 350 GLY A 363 1 14 HELIX 7 AA7 GLN A 365 GLY A 377 1 13 HELIX 8 AA8 ASP A 378 GLU A 384 1 7 HELIX 9 AA9 THR A 400 LEU A 414 1 15 HELIX 10 AB1 ALA A 418 CYS A 434 1 17 HELIX 11 AB2 SER A 437 SER A 447 1 11 HELIX 12 AB3 ALA A 455 THR A 470 1 16 HELIX 13 AB4 THR A 488 VAL A 510 1 23 HELIX 14 AB5 ASP A 512 GLY A 524 1 13 HELIX 15 AB6 ARG A 527 CYS A 532 1 6 HELIX 16 AB7 GLY A 550 PHE A 558 1 9 HELIX 17 AB8 TYR A 598 ILE A 605 1 8 HELIX 18 AB9 PRO A 606 ILE A 608 5 3 HELIX 19 AC1 PRO A 634 THR A 639 1 6 HELIX 20 AC2 PRO A 674 ASN A 685 1 12 HELIX 21 AC3 ASP A 703 ASP A 717 1 15 HELIX 22 AC4 LYS A 747 ASP A 751 1 5 HELIX 23 AC5 ARG A 768 ALA A 772 5 5 HELIX 24 AC6 SER A 801 ALA A 814 1 14 HELIX 25 AC7 GLN A 883 ALA A 887 5 5 HELIX 26 AC8 THR A 889 SER A 901 1 13 HELIX 27 AC9 GLN B 8 ASP B 21 1 14 HELIX 28 AD1 GLU B 55 PHE B 57 5 3 HELIX 29 AD2 LEU B 72 LYS B 80 1 9 HELIX 30 AD3 SER B 141 GLY B 155 1 15 HELIX 31 AD4 LEU B 209 THR B 216 1 8 HELIX 32 AD5 LYS B 217 SER B 222 5 6 HELIX 33 AD6 GLY C 9 LYS C 20 1 12 HELIX 34 AD7 GLU C 55 PHE C 57 5 3 HELIX 35 AD8 LEU C 72 LYS C 80 1 9 HELIX 36 AD9 SER C 141 GLY C 155 1 15 HELIX 37 AE1 LEU C 209 THR C 216 1 8 HELIX 38 AE2 LYS C 217 SER C 222 5 6 HELIX 39 AE3 GLY D 9 GLU D 17 1 9 HELIX 40 AE4 GLU D 55 PHE D 57 5 3 HELIX 41 AE5 LEU D 72 LYS D 80 1 9 HELIX 42 AE6 SER D 141 GLY D 155 1 15 HELIX 43 AE7 LEU D 209 THR D 216 1 8 HELIX 44 AE8 LYS D 217 SER D 222 5 6 SHEET 1 AA1 5 LEU A 544 THR A 548 0 SHEET 2 AA1 5 HIS A 740 LYS A 746 1 O TRP A 742 N HIS A 546 SHEET 3 AA1 5 CYS A 719 THR A 726 -1 N LEU A 722 O LEU A 745 SHEET 4 AA1 5 PHE A 563 TYR A 569 -1 N GLU A 566 O MET A 723 SHEET 5 AA1 5 SER A 698 ASP A 700 -1 O LEU A 699 N CYS A 565 SHEET 1 AA2 5 VAL A 584 PHE A 587 0 SHEET 2 AA2 5 GLN A 572 ALA A 578 -1 N HIS A 577 O LYS A 585 SHEET 3 AA2 5 PHE A 616 ASP A 626 -1 O LEU A 618 N ILE A 576 SHEET 4 AA2 5 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 5 AA2 5 GLU A 668 SER A 669 -1 O GLU A 668 N LEU A 665 SHEET 1 AA3 4 GLN A 631 ILE A 632 0 SHEET 2 AA3 4 PHE A 616 ASP A 626 -1 N ASP A 626 O GLN A 631 SHEET 3 AA3 4 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 4 AA3 4 PHE A 693 PHE A 695 1 O VAL A 694 N LEU A 657 SHEET 1 AA4 6 VAL A 816 LEU A 817 0 SHEET 2 AA4 6 HIS A 834 CYS A 846 -1 O TRP A 835 N LEU A 817 SHEET 3 AA4 6 ASP A 755 LEU A 766 -1 N LEU A 759 O TRP A 842 SHEET 4 AA4 6 TYR A 775 ASP A 784 -1 O GLY A 777 N TYR A 765 SHEET 5 AA4 6 GLU A 789 LEU A 796 -1 O CYS A 794 N LEU A 780 SHEET 6 AA4 6 VAL A 824 ARG A 825 1 O ARG A 825 N LEU A 790 SHEET 1 AA5 3 VAL A 816 LEU A 817 0 SHEET 2 AA5 3 HIS A 834 CYS A 846 -1 O TRP A 835 N LEU A 817 SHEET 3 AA5 3 ARG A 874 VAL A 878 -1 O ARG A 877 N GLU A 843 SHEET 1 AA6 2 ASP A 848 SER A 852 0 SHEET 2 AA6 2 GLY A 867 ARG A 871 -1 O ARG A 871 N ASP A 848 SHEET 1 AA7 9 THR B 59 ARG B 61 0 SHEET 2 AA7 9 PHE B 2 LEU B 6 -1 N ARG B 5 O THR B 59 SHEET 3 AA7 9 ILE B 87 ALA B 92 -1 O ALA B 92 N PHE B 2 SHEET 4 AA7 9 THR B 98 GLU B 104 -1 O ALA B 100 N ARG B 91 SHEET 5 AA7 9 LYS B 110 LYS B 117 -1 O SER B 112 N PHE B 103 SHEET 6 AA7 9 GLY C 176 LEU C 182 -1 O ASN C 179 N ASP B 113 SHEET 7 AA7 9 GLY C 166 GLY C 173 -1 N ALA C 171 O GLY C 178 SHEET 8 AA7 9 ALA C 157 ALA C 163 -1 N VAL C 159 O SER C 170 SHEET 9 AA7 9 VAL C 203 ALA C 208 -1 O LEU C 205 N ILE C 160 SHEET 1 AA8 9 LEU B 66 ASN B 71 0 SHEET 2 AA8 9 GLU B 25 SER B 31 -1 N ILE B 30 O LEU B 66 SHEET 3 AA8 9 GLY B 34 MET B 40 -1 O ASN B 36 N ASP B 29 SHEET 4 AA8 9 SER B 46 ARG B 53 -1 O LEU B 52 N VAL B 35 SHEET 5 AA8 9 GLY B 245 LEU B 251 -1 O TYR B 250 N LEU B 47 SHEET 6 AA8 9 LEU B 235 ILE B 241 -1 N LEU B 235 O LEU B 251 SHEET 7 AA8 9 THR B 224 MET B 229 -1 N SER B 228 O VAL B 236 SHEET 8 AA8 9 CYS B 135 PRO B 140 -1 N VAL B 137 O LEU B 227 SHEET 9 AA8 9 THR B 196 MET B 199 -1 O GLU B 198 N VAL B 136 SHEET 1 AA9 9 GLN B 204 ALA B 208 0 SHEET 2 AA9 9 ALA B 157 SER B 161 -1 N ILE B 160 O LEU B 205 SHEET 3 AA9 9 VAL B 167 GLY B 173 -1 O LYS B 168 N SER B 161 SHEET 4 AA9 9 GLY B 176 LEU B 182 -1 O LEU B 182 N VAL B 167 SHEET 5 AA9 9 LYS D 110 LYS D 117 -1 O ASP D 113 N ASN B 179 SHEET 6 AA9 9 THR D 98 GLU D 104 -1 N LEU D 101 O TYR D 114 SHEET 7 AA9 9 ILE D 87 ALA D 92 -1 N ARG D 91 O ALA D 100 SHEET 8 AA9 9 PHE D 2 LEU D 6 -1 N LEU D 6 O ILE D 88 SHEET 9 AA9 9 THR D 59 TYR D 60 -1 O THR D 59 N ARG D 5 SHEET 1 AB1 9 THR C 59 CYS C 62 0 SHEET 2 AB1 9 PHE C 2 LEU C 6 -1 N ARG C 5 O THR C 59 SHEET 3 AB1 9 ILE C 87 ALA C 92 -1 O ILE C 88 N LEU C 6 SHEET 4 AB1 9 THR C 98 GLU C 104 -1 O GLU C 104 N ILE C 87 SHEET 5 AB1 9 LYS C 110 LYS C 117 -1 O TYR C 114 N LEU C 101 SHEET 6 AB1 9 GLY D 176 SER D 183 -1 O ASN D 179 N ASP C 113 SHEET 7 AB1 9 GLY D 166 GLY D 173 -1 N VAL D 167 O LEU D 182 SHEET 8 AB1 9 ALA D 157 ALA D 163 -1 N VAL D 159 O SER D 170 SHEET 9 AB1 9 GLN D 204 ALA D 208 -1 O LEU D 205 N ILE D 160 SHEET 1 AB2 9 ALA C 67 ASN C 71 0 SHEET 2 AB2 9 GLU C 25 SER C 31 -1 N ALA C 26 O VAL C 70 SHEET 3 AB2 9 GLY C 34 MET C 40 -1 O ASN C 36 N ASP C 29 SHEET 4 AB2 9 SER C 46 ARG C 53 -1 O LEU C 52 N VAL C 35 SHEET 5 AB2 9 GLY C 245 LEU C 251 -1 O TYR C 250 N LEU C 47 SHEET 6 AB2 9 LEU C 235 TYR C 239 -1 N TYR C 239 O LEU C 247 SHEET 7 AB2 9 THR C 224 MET C 229 -1 N SER C 228 O VAL C 236 SHEET 8 AB2 9 CYS C 135 PRO C 140 -1 N MET C 139 O VAL C 225 SHEET 9 AB2 9 THR C 196 MET C 199 -1 O THR C 196 N LYS C 138 SHEET 1 AB3 9 LEU D 66 ASN D 71 0 SHEET 2 AB3 9 GLU D 25 SER D 31 -1 N ALA D 26 O VAL D 70 SHEET 3 AB3 9 GLY D 34 MET D 40 -1 O ASN D 36 N ASP D 29 SHEET 4 AB3 9 SER D 46 ARG D 53 -1 O LEU D 52 N VAL D 35 SHEET 5 AB3 9 GLY D 245 LEU D 251 -1 O TYR D 250 N LEU D 47 SHEET 6 AB3 9 LEU D 235 ILE D 241 -1 N VAL D 237 O TYR D 249 SHEET 7 AB3 9 THR D 224 MET D 229 -1 N THR D 226 O GLU D 238 SHEET 8 AB3 9 CYS D 135 PRO D 140 -1 N VAL D 137 O LEU D 227 SHEET 9 AB3 9 THR D 196 MET D 199 -1 O GLU D 198 N VAL D 136 LINK O3' DT H 18 P DOC H 19 1555 1555 1.63 LINK P DG I 20 O3P AMP I 100 1555 1555 1.69 CISPEP 1 PHE A 476 PRO A 477 0 -5.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000