HEADER REPLICATION 23-DEC-21 7QO1 TITLE COMPLEX OF DNA LIGASE I AND FEN1 ON PCNA AND DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA LIGASE I,POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP] 1; COMPND 5 EC: 6.5.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 9 CHAIN: B, F, G; COMPND 10 SYNONYM: PCNA,CYCLIN; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: OLIGO19DDC; COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: OLIGO13P; COMPND 18 CHAIN: I; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: OLIGO32; COMPND 22 CHAIN: J; COMPND 23 ENGINEERED: YES; COMPND 24 MOL_ID: 6; COMPND 25 MOLECULE: FLAP ENDONUCLEASE 1; COMPND 26 CHAIN: Y; COMPND 27 SYNONYM: FEN-1,DNASE IV,FLAP STRUCTURE-SPECIFIC ENDONUCLEASE 1, COMPND 28 MATURATION FACTOR 1,HFEN-1; COMPND 29 EC: 3.1.-.-; COMPND 30 ENGINEERED: YES; COMPND 31 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PCNA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630; SOURCE 23 MOL_ID: 5; SOURCE 24 SYNTHETIC: YES; SOURCE 25 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 26 ORGANISM_TAXID: 32630; SOURCE 27 MOL_ID: 6; SOURCE 28 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 29 ORGANISM_COMMON: HUMAN; SOURCE 30 ORGANISM_TAXID: 9606; SOURCE 31 GENE: FEN1, RAD2; SOURCE 32 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 33 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DNA, REPLICATION, COMPLEX, LIGASE, PCNA, LIGATION, FEN1, FLAP KEYWDS 2 ENDONUCLEASE I, OKAZAKI FRAGMENT MATURATION EXPDTA ELECTRON MICROSCOPY AUTHOR K.BLAIR,M.TEHSEEN,V.S.RADUCANU,T.SHAHID,C.LANCEY,R.CRUEHET,S.HAMDAN, AUTHOR 2 A.DE BIASIO REVDAT 1 11-JAN-23 7QO1 0 JRNL AUTH K.BLAIR,M.TEHSEEN,V.S.RADUCANU,T.SHAHID,C.LANCEY,F.RASHID, JRNL AUTH 2 R.CREUHET,S.M.HAMDAN,A.DE BIASIO JRNL TITL MECHANISM OF HUMAN LIG1 REGULATION BY PCNA IN OKAZAKI JRNL TITL 2 FRAGMENT SEALING. JRNL REF NAT COMMUN V. 13 7833 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36539424 JRNL DOI 10.1038/S41467-022-35475-Z REMARK 2 REMARK 2 RESOLUTION. 4.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CTFFIND, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.400 REMARK 3 NUMBER OF PARTICLES : 99243 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7QO1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292119913. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF DNA LIGASE I AND REMARK 245 FEN1 ON PCNA AND DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : THE GRID WAS COATED WITH REMARK 245 GRAPHENE OXIDE PRIOR TO USE. REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F, G, H, I, J, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 160 REMARK 465 LYS A 161 REMARK 465 GLU A 162 REMARK 465 SER A 163 REMARK 465 LEU A 164 REMARK 465 THR A 165 REMARK 465 GLU A 166 REMARK 465 ALA A 167 REMARK 465 GLU A 168 REMARK 465 VAL A 169 REMARK 465 ALA A 170 REMARK 465 THR A 171 REMARK 465 GLU A 172 REMARK 465 LYS A 173 REMARK 465 GLU A 174 REMARK 465 GLY A 175 REMARK 465 GLU A 176 REMARK 465 ASP A 177 REMARK 465 GLY A 178 REMARK 465 ASP A 179 REMARK 465 GLN A 180 REMARK 465 PRO A 181 REMARK 465 THR A 182 REMARK 465 THR A 183 REMARK 465 PRO A 184 REMARK 465 PRO A 185 REMARK 465 LYS A 186 REMARK 465 PRO A 187 REMARK 465 LEU A 188 REMARK 465 LYS A 189 REMARK 465 THR A 190 REMARK 465 SER A 191 REMARK 465 LYS A 192 REMARK 465 ALA A 193 REMARK 465 GLU A 194 REMARK 465 THR A 195 REMARK 465 PRO A 196 REMARK 465 THR A 197 REMARK 465 GLU A 198 REMARK 465 SER A 199 REMARK 465 VAL A 200 REMARK 465 SER A 201 REMARK 465 GLU A 202 REMARK 465 PRO A 203 REMARK 465 GLU A 204 REMARK 465 VAL A 205 REMARK 465 ALA A 206 REMARK 465 THR A 207 REMARK 465 LYS A 208 REMARK 465 GLN A 209 REMARK 465 GLU A 210 REMARK 465 LEU A 211 REMARK 465 GLN A 212 REMARK 465 GLU A 213 REMARK 465 GLU A 214 REMARK 465 GLU A 215 REMARK 465 GLU A 216 REMARK 465 GLN A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 PRO A 220 REMARK 465 PRO A 221 REMARK 465 ARG A 222 REMARK 465 ARG A 223 REMARK 465 ALA A 224 REMARK 465 PRO A 225 REMARK 465 LYS A 226 REMARK 465 THR A 227 REMARK 465 LEU A 228 REMARK 465 SER A 229 REMARK 465 SER A 230 REMARK 465 PHE A 231 REMARK 465 PHE A 232 REMARK 465 THR A 233 REMARK 465 PRO A 234 REMARK 465 ARG A 235 REMARK 465 LYS A 236 REMARK 465 PRO A 237 REMARK 465 ALA A 238 REMARK 465 VAL A 239 REMARK 465 LYS A 240 REMARK 465 LYS A 241 REMARK 465 GLU A 242 REMARK 465 VAL A 243 REMARK 465 LYS A 244 REMARK 465 GLU A 245 REMARK 465 GLU A 246 REMARK 465 GLU A 247 REMARK 465 PRO A 248 REMARK 465 GLY A 249 REMARK 465 ALA A 250 REMARK 465 PRO A 251 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 GLU A 254 REMARK 465 GLY A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 257 REMARK 465 GLU A 258 REMARK 465 GLY A 259 REMARK 465 PRO A 260 REMARK 465 LEU A 261 REMARK 465 GLN A 902 REMARK 465 ILE A 903 REMARK 465 GLN A 904 REMARK 465 ASN A 905 REMARK 465 GLN A 906 REMARK 465 GLN A 907 REMARK 465 GLY A 908 REMARK 465 GLU A 909 REMARK 465 ASP A 910 REMARK 465 SER A 911 REMARK 465 GLY A 912 REMARK 465 SER A 913 REMARK 465 ASP A 914 REMARK 465 PRO A 915 REMARK 465 GLU A 916 REMARK 465 ASP A 917 REMARK 465 THR A 918 REMARK 465 TYR A 919 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 HIS B 0 REMARK 465 GLU B 256 REMARK 465 ASP B 257 REMARK 465 GLU B 258 REMARK 465 GLU B 259 REMARK 465 GLY B 260 REMARK 465 SER B 261 REMARK 465 GLY F -2 REMARK 465 PRO F -1 REMARK 465 HIS F 0 REMARK 465 ASN F 187 REMARK 465 VAL F 188 REMARK 465 ASP F 189 REMARK 465 GLU F 256 REMARK 465 ASP F 257 REMARK 465 GLU F 258 REMARK 465 GLU F 259 REMARK 465 GLY F 260 REMARK 465 SER F 261 REMARK 465 GLY G -2 REMARK 465 PRO G -1 REMARK 465 HIS G 0 REMARK 465 SER G 186 REMARK 465 ASN G 187 REMARK 465 VAL G 188 REMARK 465 ASP G 189 REMARK 465 LYS G 190 REMARK 465 GLU G 191 REMARK 465 GLU G 192 REMARK 465 GLU G 193 REMARK 465 ALA G 194 REMARK 465 GLU G 256 REMARK 465 ASP G 257 REMARK 465 GLU G 258 REMARK 465 GLU G 259 REMARK 465 GLY G 260 REMARK 465 SER G 261 REMARK 465 DC I 32 REMARK 465 DG J 0 REMARK 465 MET Y 1 REMARK 465 ALA Y 45 REMARK 465 VAL Y 46 REMARK 465 ARG Y 47 REMARK 465 GLN Y 48 REMARK 465 GLY Y 49 REMARK 465 GLY Y 50 REMARK 465 ASP Y 51 REMARK 465 VAL Y 52 REMARK 465 LEU Y 53 REMARK 465 GLN Y 54 REMARK 465 ASN Y 55 REMARK 465 GLU Y 56 REMARK 465 GLU Y 57 REMARK 465 GLY Y 58 REMARK 465 GLU Y 59 REMARK 465 ALA Y 98 REMARK 465 LYS Y 99 REMARK 465 ARG Y 100 REMARK 465 SER Y 101 REMARK 465 GLU Y 102 REMARK 465 ARG Y 103 REMARK 465 ARG Y 104 REMARK 465 ALA Y 105 REMARK 465 GLU Y 106 REMARK 465 ALA Y 107 REMARK 465 GLU Y 108 REMARK 465 LYS Y 109 REMARK 465 GLN Y 110 REMARK 465 LEU Y 111 REMARK 465 GLN Y 112 REMARK 465 GLN Y 113 REMARK 465 ALA Y 114 REMARK 465 GLN Y 115 REMARK 465 ALA Y 116 REMARK 465 ALA Y 117 REMARK 465 GLY Y 118 REMARK 465 ALA Y 119 REMARK 465 GLU Y 120 REMARK 465 GLN Y 121 REMARK 465 GLU Y 122 REMARK 465 VAL Y 123 REMARK 465 GLU Y 124 REMARK 465 LYS Y 125 REMARK 465 PHE Y 126 REMARK 465 THR Y 127 REMARK 465 LYS Y 128 REMARK 465 ARG Y 129 REMARK 465 LEU Y 130 REMARK 465 VAL Y 131 REMARK 465 LYS Y 132 REMARK 465 VAL Y 133 REMARK 465 LYS Y 354 REMARK 465 ARG Y 355 REMARK 465 LYS Y 356 REMARK 465 GLU Y 357 REMARK 465 PRO Y 358 REMARK 465 GLU Y 359 REMARK 465 PRO Y 360 REMARK 465 LYS Y 361 REMARK 465 GLY Y 362 REMARK 465 SER Y 363 REMARK 465 THR Y 364 REMARK 465 LYS Y 365 REMARK 465 LYS Y 366 REMARK 465 LYS Y 367 REMARK 465 ALA Y 368 REMARK 465 LYS Y 369 REMARK 465 THR Y 370 REMARK 465 GLY Y 371 REMARK 465 ALA Y 372 REMARK 465 ALA Y 373 REMARK 465 GLY Y 374 REMARK 465 LYS Y 375 REMARK 465 PHE Y 376 REMARK 465 LYS Y 377 REMARK 465 ARG Y 378 REMARK 465 GLY Y 379 REMARK 465 LYS Y 380 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 627 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 628 CG CD OE1 OE2 REMARK 470 ARG A 643 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 644 CG CD CE NZ REMARK 470 GLU A 645 CG CD OE1 OE2 REMARK 470 VAL A 646 CG1 CG2 REMARK 470 GLU A 709 CG CD OE1 OE2 REMARK 470 GLU A 712 CG CD OE1 OE2 REMARK 470 GLU A 807 CG CD OE1 OE2 REMARK 470 ARG A 859 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 899 CG CD CE NZ REMARK 470 ASN B 107 CG OD1 ND2 REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 470 ASP B 122 CG OD1 OD2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 LYS B 164 CG CD CE NZ REMARK 470 LYS B 181 CG CD CE NZ REMARK 470 ASP B 189 CG OD1 OD2 REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 ASN F 107 CG OD1 ND2 REMARK 470 GLU F 109 CG CD OE1 OE2 REMARK 470 LYS F 164 CG CD CE NZ REMARK 470 LYS F 190 CG CD CE NZ REMARK 470 ARG G 64 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 138 CG CD CE NZ REMARK 470 GLU G 174 CG CD OE1 OE2 REMARK 470 ARG G 210 CG CD NE CZ NH1 NH2 REMARK 470 LYS Y 8 CG CD CE NZ REMARK 470 ARG Y 19 CG CD NE CZ NH1 NH2 REMARK 470 ILE Y 44 CG1 CG2 CD1 REMARK 470 LYS Y 93 CG CD CE NZ REMARK 470 GLU Y 96 CG CD OE1 OE2 REMARK 470 LEU Y 97 CG CD1 CD2 REMARK 470 CYS Y 141 SG REMARK 470 HIS Y 143 CG ND1 CD2 CE1 NE2 REMARK 470 LEU Y 147 CG CD1 CD2 REMARK 470 TYR Y 152 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS Y 168 CG CD CE NZ REMARK 470 GLN Y 214 CG CD OE1 NE2 REMARK 470 ASN Y 219 CG OD1 ND2 REMARK 470 SER Y 237 OG REMARK 470 ILE Y 238 CG1 CG2 CD1 REMARK 470 ARG Y 239 CG CD NE CZ NH1 NH2 REMARK 470 ILE Y 241 CG1 CG2 CD1 REMARK 470 LYS Y 244 CG CD CE NZ REMARK 470 VAL Y 247 CG1 CG2 REMARK 470 ILE Y 250 CG1 CG2 CD1 REMARK 470 GLN Y 251 CG CD OE1 NE2 REMARK 470 LYS Y 254 CG CD CE NZ REMARK 470 ILE Y 256 CG1 CG2 CD1 REMARK 470 GLU Y 257 CG CD OE1 OE2 REMARK 470 ILE Y 259 CG1 CG2 CD1 REMARK 470 LYS Y 267 CG CD CE NZ REMARK 470 TYR Y 268 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL Y 270 CG1 CG2 REMARK 470 GLU Y 272 CG CD OE1 OE2 REMARK 470 ASN Y 273 CG OD1 ND2 REMARK 470 TRP Y 274 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Y 274 CZ3 CH2 REMARK 470 HIS Y 276 CG ND1 CD2 CE1 NE2 REMARK 470 LYS Y 277 CG CD CE NZ REMARK 470 GLU Y 285 CG CD OE1 OE2 REMARK 470 LEU Y 296 CG CD1 CD2 REMARK 470 LYS Y 297 CG CD CE NZ REMARK 470 GLU Y 303 CG CD OE1 OE2 REMARK 470 LEU Y 306 CG CD1 CD2 REMARK 470 PHE Y 309 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET Y 310 CG SD CE REMARK 470 LYS Y 314 CG CD CE NZ REMARK 470 LYS Y 326 CG CD CE NZ REMARK 470 GLN Y 333 CG CD OE1 NE2 REMARK 470 ARG Y 339 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG H 17 O3' DT H 18 P -0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 440 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 449 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 451 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 TYR A 664 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 678 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 678 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 738 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 771 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 774 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 871 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 874 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 877 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 91 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 146 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG F 91 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 PHE G 57 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 PHE G 215 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 TYR G 249 CB - CG - CD2 ANGL. DEV. = -4.4 DEGREES REMARK 500 DG H 1 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC H 2 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT H 3 C6 - C5 - C7 ANGL. DEV. = -3.6 DEGREES REMARK 500 DT H 4 C6 - C5 - C7 ANGL. DEV. = -4.2 DEGREES REMARK 500 DC H 5 N1 - C2 - O2 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT H 6 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT H 8 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC H 10 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DC H 10 N3 - C2 - O2 ANGL. DEV. = -4.6 DEGREES REMARK 500 DT H 11 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT H 11 C6 - C5 - C7 ANGL. DEV. = -3.9 DEGREES REMARK 500 DA H 13 C4 - C5 - C6 ANGL. DEV. = -3.2 DEGREES REMARK 500 DA H 13 C5 - C6 - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DA H 13 N1 - C6 - N6 ANGL. DEV. = -5.2 DEGREES REMARK 500 DT H 14 C6 - C5 - C7 ANGL. DEV. = -3.6 DEGREES REMARK 500 DG H 15 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG H 17 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT H 18 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT H 18 C3' - O3' - P ANGL. DEV. = -23.8 DEGREES REMARK 500 DOC H 19 O3' - P - OP2 ANGL. DEV. = 24.7 DEGREES REMARK 500 DOC H 19 O3' - P - OP1 ANGL. DEV. = -21.3 DEGREES REMARK 500 DG I 20 C3' - O3' - P ANGL. DEV. = -9.3 DEGREES REMARK 500 DA I 25 C5 - C6 - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DC I 26 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC I 26 N3 - C2 - O2 ANGL. DEV. = -4.6 DEGREES REMARK 500 DT I 27 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA I 29 C5 - C6 - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DA I 30 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA I 30 C4 - C5 - C6 ANGL. DEV. = -4.0 DEGREES REMARK 500 DG J 1 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG J 1 N1 - C6 - O6 ANGL. DEV. = -4.2 DEGREES REMARK 500 DT J 3 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 95 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 336 -21.54 63.17 REMARK 500 ASN A 385 12.51 58.18 REMARK 500 THR A 389 19.63 58.09 REMARK 500 ALA A 418 18.81 56.82 REMARK 500 HIS A 436 -61.56 -141.78 REMARK 500 SER A 437 14.27 -147.08 REMARK 500 ILE A 516 -60.78 -92.60 REMARK 500 CYS A 532 35.02 -84.88 REMARK 500 ASN A 590 43.72 -83.55 REMARK 500 GLN A 591 -23.69 69.44 REMARK 500 PHE A 660 -12.32 -145.29 REMARK 500 ASP A 700 73.23 -109.33 REMARK 500 ASP A 717 30.57 -94.32 REMARK 500 ASP A 728 -50.95 -146.14 REMARK 500 ASP A 730 9.74 57.43 REMARK 500 HIS A 740 72.05 -101.43 REMARK 500 ASP A 755 73.96 -67.11 REMARK 500 SER A 787 -8.38 -143.17 REMARK 500 TYR A 823 0.74 -66.48 REMARK 500 PRO A 838 39.92 -73.12 REMARK 500 VAL A 862 -65.04 -136.74 REMARK 500 ILE A 876 -58.43 -134.20 REMARK 500 GLN B 108 -20.93 62.91 REMARK 500 THR B 185 75.55 -69.59 REMARK 500 GLU B 191 -61.72 62.92 REMARK 500 ALA B 242 -122.53 49.96 REMARK 500 LYS B 254 46.27 -109.95 REMARK 500 SER F 42 1.22 -64.84 REMARK 500 HIS F 44 -6.31 59.16 REMARK 500 ILE F 78 -70.09 -64.81 REMARK 500 GLN F 108 2.13 -65.40 REMARK 500 GLU F 124 96.61 -64.24 REMARK 500 ASN F 200 -59.16 -128.95 REMARK 500 ALA F 231 -77.22 2.80 REMARK 500 ALA F 242 -154.92 49.24 REMARK 500 CYS G 62 112.80 -161.80 REMARK 500 ASN G 95 13.02 -146.88 REMARK 500 GLN G 108 -0.59 61.28 REMARK 500 ARG G 210 -0.38 -54.74 REMARK 500 THR G 216 4.50 -68.11 REMARK 500 ALA G 218 9.83 -68.29 REMARK 500 ALA G 242 -128.33 49.79 REMARK 500 SER Y 157 -152.15 -142.61 REMARK 500 LYS Y 200 96.49 -64.95 REMARK 500 LEU Y 202 77.23 28.43 REMARK 500 PRO Y 203 151.43 -47.94 REMARK 500 GLN Y 222 20.11 -77.10 REMARK 500 PHE Y 223 -36.64 -132.59 REMARK 500 LYS Y 254 27.38 -69.17 REMARK 500 LEU Y 275 4.56 -69.80 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 567 0.07 SIDE CHAIN REMARK 500 TYR A 664 0.11 SIDE CHAIN REMARK 500 ARG A 768 0.13 SIDE CHAIN REMARK 500 ARG A 874 0.09 SIDE CHAIN REMARK 500 ARG A 877 0.08 SIDE CHAIN REMARK 500 TYR F 60 0.07 SIDE CHAIN REMARK 500 ARG F 146 0.09 SIDE CHAIN REMARK 500 TYR F 249 0.07 SIDE CHAIN REMARK 500 TYR G 249 0.08 SIDE CHAIN REMARK 500 TYR G 250 0.07 SIDE CHAIN REMARK 500 DG H 1 0.07 SIDE CHAIN REMARK 500 DT H 8 0.10 SIDE CHAIN REMARK 500 DG H 15 0.10 SIDE CHAIN REMARK 500 DC H 16 0.07 SIDE CHAIN REMARK 500 DT I 27 0.11 SIDE CHAIN REMARK 500 DA I 29 0.06 SIDE CHAIN REMARK 500 DA I 30 0.09 SIDE CHAIN REMARK 500 DC I 31 0.07 SIDE CHAIN REMARK 500 DT J 2 0.10 SIDE CHAIN REMARK 500 DG J 10 0.06 SIDE CHAIN REMARK 500 DG J 13 0.07 SIDE CHAIN REMARK 500 DA J 24 0.08 SIDE CHAIN REMARK 500 DG J 30 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-14080 RELATED DB: EMDB REMARK 900 COMPLEX OF DNA LIGASE I AND FEN1 ON PCNA AND DNA DBREF 7QO1 A 161 919 UNP P18858 DNLI1_HUMAN 161 919 DBREF 7QO1 B 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QO1 F 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QO1 G 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 7QO1 H 1 19 PDB 7QO1 7QO1 1 19 DBREF 7QO1 I 20 32 PDB 7QO1 7QO1 20 32 DBREF 7QO1 J 0 31 PDB 7QO1 7QO1 0 31 DBREF 7QO1 Y 1 380 UNP P39748 FEN1_HUMAN 1 380 SEQADV 7QO1 CYS A 160 UNP P18858 EXPRESSION TAG SEQADV 7QO1 GLY B -2 UNP P12004 EXPRESSION TAG SEQADV 7QO1 PRO B -1 UNP P12004 EXPRESSION TAG SEQADV 7QO1 HIS B 0 UNP P12004 EXPRESSION TAG SEQADV 7QO1 GLY F -2 UNP P12004 EXPRESSION TAG SEQADV 7QO1 PRO F -1 UNP P12004 EXPRESSION TAG SEQADV 7QO1 HIS F 0 UNP P12004 EXPRESSION TAG SEQADV 7QO1 GLY G -2 UNP P12004 EXPRESSION TAG SEQADV 7QO1 PRO G -1 UNP P12004 EXPRESSION TAG SEQADV 7QO1 HIS G 0 UNP P12004 EXPRESSION TAG SEQADV 7QO1 ALA Y 181 UNP P39748 ASP 181 ENGINEERED MUTATION SEQRES 1 A 760 CYS LYS GLU SER LEU THR GLU ALA GLU VAL ALA THR GLU SEQRES 2 A 760 LYS GLU GLY GLU ASP GLY ASP GLN PRO THR THR PRO PRO SEQRES 3 A 760 LYS PRO LEU LYS THR SER LYS ALA GLU THR PRO THR GLU SEQRES 4 A 760 SER VAL SER GLU PRO GLU VAL ALA THR LYS GLN GLU LEU SEQRES 5 A 760 GLN GLU GLU GLU GLU GLN THR LYS PRO PRO ARG ARG ALA SEQRES 6 A 760 PRO LYS THR LEU SER SER PHE PHE THR PRO ARG LYS PRO SEQRES 7 A 760 ALA VAL LYS LYS GLU VAL LYS GLU GLU GLU PRO GLY ALA SEQRES 8 A 760 PRO GLY LYS GLU GLY ALA ALA GLU GLY PRO LEU ASP PRO SEQRES 9 A 760 SER GLY TYR ASN PRO ALA LYS ASN ASN TYR HIS PRO VAL SEQRES 10 A 760 GLU ASP ALA CYS TRP LYS PRO GLY GLN LYS VAL PRO TYR SEQRES 11 A 760 LEU ALA VAL ALA ARG THR PHE GLU LYS ILE GLU GLU VAL SEQRES 12 A 760 SER ALA ARG LEU ARG MET VAL GLU THR LEU SER ASN LEU SEQRES 13 A 760 LEU ARG SER VAL VAL ALA LEU SER PRO PRO ASP LEU LEU SEQRES 14 A 760 PRO VAL LEU TYR LEU SER LEU ASN HIS LEU GLY PRO PRO SEQRES 15 A 760 GLN GLN GLY LEU GLU LEU GLY VAL GLY ASP GLY VAL LEU SEQRES 16 A 760 LEU LYS ALA VAL ALA GLN ALA THR GLY ARG GLN LEU GLU SEQRES 17 A 760 SER VAL ARG ALA GLU ALA ALA GLU LYS GLY ASP VAL GLY SEQRES 18 A 760 LEU VAL ALA GLU ASN SER ARG SER THR GLN ARG LEU MET SEQRES 19 A 760 LEU PRO PRO PRO PRO LEU THR ALA SER GLY VAL PHE SER SEQRES 20 A 760 LYS PHE ARG ASP ILE ALA ARG LEU THR GLY SER ALA SER SEQRES 21 A 760 THR ALA LYS LYS ILE ASP ILE ILE LYS GLY LEU PHE VAL SEQRES 22 A 760 ALA CYS ARG HIS SER GLU ALA ARG PHE ILE ALA ARG SER SEQRES 23 A 760 LEU SER GLY ARG LEU ARG LEU GLY LEU ALA GLU GLN SER SEQRES 24 A 760 VAL LEU ALA ALA LEU SER GLN ALA VAL SER LEU THR PRO SEQRES 25 A 760 PRO GLY GLN GLU PHE PRO PRO ALA MET VAL ASP ALA GLY SEQRES 26 A 760 LYS GLY LYS THR ALA GLU ALA ARG LYS THR TRP LEU GLU SEQRES 27 A 760 GLU GLN GLY MET ILE LEU LYS GLN THR PHE CYS GLU VAL SEQRES 28 A 760 PRO ASP LEU ASP ARG ILE ILE PRO VAL LEU LEU GLU HIS SEQRES 29 A 760 GLY LEU GLU ARG LEU PRO GLU HIS CYS LYS LEU SER PRO SEQRES 30 A 760 GLY ILE PRO LEU LYS PRO MET LEU ALA HIS PRO THR ARG SEQRES 31 A 760 GLY ILE SER GLU VAL LEU LYS ARG PHE GLU GLU ALA ALA SEQRES 32 A 760 PHE THR CYS GLU TYR LYS TYR ASP GLY GLN ARG ALA GLN SEQRES 33 A 760 ILE HIS ALA LEU GLU GLY GLY GLU VAL LYS ILE PHE SER SEQRES 34 A 760 ARG ASN GLN GLU ASP ASN THR GLY LYS TYR PRO ASP ILE SEQRES 35 A 760 ILE SER ARG ILE PRO LYS ILE LYS LEU PRO SER VAL THR SEQRES 36 A 760 SER PHE ILE LEU ASP THR GLU ALA VAL ALA TRP ASP ARG SEQRES 37 A 760 GLU LYS LYS GLN ILE GLN PRO PHE GLN VAL LEU THR THR SEQRES 38 A 760 ARG LYS ARG LYS GLU VAL ASP ALA SER GLU ILE GLN VAL SEQRES 39 A 760 GLN VAL CYS LEU TYR ALA PHE ASP LEU ILE TYR LEU ASN SEQRES 40 A 760 GLY GLU SER LEU VAL ARG GLU PRO LEU SER ARG ARG ARG SEQRES 41 A 760 GLN LEU LEU ARG GLU ASN PHE VAL GLU THR GLU GLY GLU SEQRES 42 A 760 PHE VAL PHE ALA THR SER LEU ASP THR LYS ASP ILE GLU SEQRES 43 A 760 GLN ILE ALA GLU PHE LEU GLU GLN SER VAL LYS ASP SER SEQRES 44 A 760 CYS GLU GLY LEU MET VAL LYS THR LEU ASP VAL ASP ALA SEQRES 45 A 760 THR TYR GLU ILE ALA LYS ARG SER HIS ASN TRP LEU LYS SEQRES 46 A 760 LEU LYS LYS ASP TYR LEU ASP GLY VAL GLY ASP THR LEU SEQRES 47 A 760 ASP LEU VAL VAL ILE GLY ALA TYR LEU GLY ARG GLY LYS SEQRES 48 A 760 ARG ALA GLY ARG TYR GLY GLY PHE LEU LEU ALA SER TYR SEQRES 49 A 760 ASP GLU ASP SER GLU GLU LEU GLN ALA ILE CYS LYS LEU SEQRES 50 A 760 GLY THR GLY PHE SER ASP GLU GLU LEU GLU GLU HIS HIS SEQRES 51 A 760 GLN SER LEU LYS ALA LEU VAL LEU PRO SER PRO ARG PRO SEQRES 52 A 760 TYR VAL ARG ILE ASP GLY ALA VAL ILE PRO ASP HIS TRP SEQRES 53 A 760 LEU ASP PRO SER ALA VAL TRP GLU VAL LYS CYS ALA ASP SEQRES 54 A 760 LEU SER LEU SER PRO ILE TYR PRO ALA ALA ARG GLY LEU SEQRES 55 A 760 VAL ASP SER ASP LYS GLY ILE SER LEU ARG PHE PRO ARG SEQRES 56 A 760 PHE ILE ARG VAL ARG GLU ASP LYS GLN PRO GLU GLN ALA SEQRES 57 A 760 THR THR SER ALA GLN VAL ALA CYS LEU TYR ARG LYS GLN SEQRES 58 A 760 SER GLN ILE GLN ASN GLN GLN GLY GLU ASP SER GLY SER SEQRES 59 A 760 ASP PRO GLU ASP THR TYR SEQRES 1 B 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 B 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 B 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 B 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 B 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 B 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 B 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 B 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 B 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 B 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 B 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 B 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 B 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 B 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 B 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 B 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 B 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 B 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 B 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 B 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 B 264 GLU GLU GLY SER SEQRES 1 F 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 F 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 F 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 F 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 F 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 F 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 F 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 F 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 F 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 F 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 F 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 F 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 F 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 F 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 F 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 F 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 F 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 F 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 F 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 F 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 F 264 GLU GLU GLY SER SEQRES 1 G 264 GLY PRO HIS MET PHE GLU ALA ARG LEU VAL GLN GLY SER SEQRES 2 G 264 ILE LEU LYS LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE SEQRES 3 G 264 ASN GLU ALA CYS TRP ASP ILE SER SER SER GLY VAL ASN SEQRES 4 G 264 LEU GLN SER MET ASP SER SER HIS VAL SER LEU VAL GLN SEQRES 5 G 264 LEU THR LEU ARG SER GLU GLY PHE ASP THR TYR ARG CYS SEQRES 6 G 264 ASP ARG ASN LEU ALA MET GLY VAL ASN LEU THR SER MET SEQRES 7 G 264 SER LYS ILE LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE SEQRES 8 G 264 THR LEU ARG ALA GLU ASP ASN ALA ASP THR LEU ALA LEU SEQRES 9 G 264 VAL PHE GLU ALA PRO ASN GLN GLU LYS VAL SER ASP TYR SEQRES 10 G 264 GLU MET LYS LEU MET ASP LEU ASP VAL GLU GLN LEU GLY SEQRES 11 G 264 ILE PRO GLU GLN GLU TYR SER CYS VAL VAL LYS MET PRO SEQRES 12 G 264 SER GLY GLU PHE ALA ARG ILE CYS ARG ASP LEU SER HIS SEQRES 13 G 264 ILE GLY ASP ALA VAL VAL ILE SER CYS ALA LYS ASP GLY SEQRES 14 G 264 VAL LYS PHE SER ALA SER GLY GLU LEU GLY ASN GLY ASN SEQRES 15 G 264 ILE LYS LEU SER GLN THR SER ASN VAL ASP LYS GLU GLU SEQRES 16 G 264 GLU ALA VAL THR ILE GLU MET ASN GLU PRO VAL GLN LEU SEQRES 17 G 264 THR PHE ALA LEU ARG TYR LEU ASN PHE PHE THR LYS ALA SEQRES 18 G 264 THR PRO LEU SER SER THR VAL THR LEU SER MET SER ALA SEQRES 19 G 264 ASP VAL PRO LEU VAL VAL GLU TYR LYS ILE ALA ASP MET SEQRES 20 G 264 GLY HIS LEU LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP SEQRES 21 G 264 GLU GLU GLY SER SEQRES 1 H 19 DG DC DT DT DC DT DG DT DG DC DT DG DA SEQRES 2 H 19 DT DG DC DG DT DOC SEQRES 1 I 13 DG DT DC DG DG DA DC DT DG DA DA DC DC SEQRES 1 J 32 DG DG DT DT DC DA DG DT DC DC DG DA DC SEQRES 2 J 32 DG DA DC DG DC DA DT DC DA DG DC DA DC SEQRES 3 J 32 DA DG DA DA DG DC SEQRES 1 Y 380 MET GLY ILE GLN GLY LEU ALA LYS LEU ILE ALA ASP VAL SEQRES 2 Y 380 ALA PRO SER ALA ILE ARG GLU ASN ASP ILE LYS SER TYR SEQRES 3 Y 380 PHE GLY ARG LYS VAL ALA ILE ASP ALA SER MET SER ILE SEQRES 4 Y 380 TYR GLN PHE LEU ILE ALA VAL ARG GLN GLY GLY ASP VAL SEQRES 5 Y 380 LEU GLN ASN GLU GLU GLY GLU THR THR SER HIS LEU MET SEQRES 6 Y 380 GLY MET PHE TYR ARG THR ILE ARG MET MET GLU ASN GLY SEQRES 7 Y 380 ILE LYS PRO VAL TYR VAL PHE ASP GLY LYS PRO PRO GLN SEQRES 8 Y 380 LEU LYS SER GLY GLU LEU ALA LYS ARG SER GLU ARG ARG SEQRES 9 Y 380 ALA GLU ALA GLU LYS GLN LEU GLN GLN ALA GLN ALA ALA SEQRES 10 Y 380 GLY ALA GLU GLN GLU VAL GLU LYS PHE THR LYS ARG LEU SEQRES 11 Y 380 VAL LYS VAL THR LYS GLN HIS ASN ASP GLU CYS LYS HIS SEQRES 12 Y 380 LEU LEU SER LEU MET GLY ILE PRO TYR LEU ASP ALA PRO SEQRES 13 Y 380 SER GLU ALA GLU ALA SER CYS ALA ALA LEU VAL LYS ALA SEQRES 14 Y 380 GLY LYS VAL TYR ALA ALA ALA THR GLU ASP MET ALA CYS SEQRES 15 Y 380 LEU THR PHE GLY SER PRO VAL LEU MET ARG HIS LEU THR SEQRES 16 Y 380 ALA SER GLU ALA LYS LYS LEU PRO ILE GLN GLU PHE HIS SEQRES 17 Y 380 LEU SER ARG ILE LEU GLN GLU LEU GLY LEU ASN GLN GLU SEQRES 18 Y 380 GLN PHE VAL ASP LEU CYS ILE LEU LEU GLY SER ASP TYR SEQRES 19 Y 380 CYS GLU SER ILE ARG GLY ILE GLY PRO LYS ARG ALA VAL SEQRES 20 Y 380 ASP LEU ILE GLN LYS HIS LYS SER ILE GLU GLU ILE VAL SEQRES 21 Y 380 ARG ARG LEU ASP PRO ASN LYS TYR PRO VAL PRO GLU ASN SEQRES 22 Y 380 TRP LEU HIS LYS GLU ALA HIS GLN LEU PHE LEU GLU PRO SEQRES 23 Y 380 GLU VAL LEU ASP PRO GLU SER VAL GLU LEU LYS TRP SER SEQRES 24 Y 380 GLU PRO ASN GLU GLU GLU LEU ILE LYS PHE MET CYS GLY SEQRES 25 Y 380 GLU LYS GLN PHE SER GLU GLU ARG ILE ARG SER GLY VAL SEQRES 26 Y 380 LYS ARG LEU SER LYS SER ARG GLN GLY SER THR GLN GLY SEQRES 27 Y 380 ARG LEU ASP ASP PHE PHE LYS VAL THR GLY SER LEU SER SEQRES 28 Y 380 SER ALA LYS ARG LYS GLU PRO GLU PRO LYS GLY SER THR SEQRES 29 Y 380 LYS LYS LYS ALA LYS THR GLY ALA ALA GLY LYS PHE LYS SEQRES 30 Y 380 ARG GLY LYS HET DOC H 19 18 HET AMP I 100 23 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 DOC C9 H14 N3 O6 P FORMUL 9 AMP C10 H14 N5 O7 P HELIX 1 AA1 ASP A 262 TYR A 266 5 5 HELIX 2 AA2 PRO A 288 GLU A 301 1 14 HELIX 3 AA3 ALA A 304 SER A 323 1 20 HELIX 4 AA4 ASP A 326 ASN A 336 1 11 HELIX 5 AA5 PRO A 340 GLY A 344 5 5 HELIX 6 AA6 GLY A 350 GLY A 363 1 14 HELIX 7 AA7 GLN A 365 GLY A 377 1 13 HELIX 8 AA8 ASP A 378 ALA A 383 1 6 HELIX 9 AA9 THR A 400 LEU A 414 1 15 HELIX 10 AB1 ALA A 418 ALA A 433 1 16 HELIX 11 AB2 SER A 437 SER A 447 1 11 HELIX 12 AB3 ALA A 455 THR A 470 1 16 HELIX 13 AB4 THR A 488 VAL A 510 1 23 HELIX 14 AB5 ASP A 512 GLY A 524 1 13 HELIX 15 AB6 ARG A 527 HIS A 531 5 5 HELIX 16 AB7 GLY A 550 PHE A 558 1 9 HELIX 17 AB8 TYR A 598 LYS A 609 1 12 HELIX 18 AB9 PRO A 634 THR A 640 1 7 HELIX 19 AC1 PRO A 674 ASN A 685 1 12 HELIX 20 AC2 ASP A 703 ASP A 717 1 15 HELIX 21 AC3 LYS A 747 ASP A 751 1 5 HELIX 22 AC4 ARG A 768 ALA A 772 5 5 HELIX 23 AC5 SER A 801 LYS A 813 1 13 HELIX 24 AC6 GLN A 883 ALA A 887 5 5 HELIX 25 AC7 THR A 889 GLN A 900 1 12 HELIX 26 AC8 GLN B 8 ASP B 21 1 14 HELIX 27 AC9 GLU B 55 PHE B 57 5 3 HELIX 28 AD1 LEU B 72 CYS B 81 1 10 HELIX 29 AD2 SER B 141 SER B 152 1 12 HELIX 30 AD3 LEU B 209 THR B 216 1 8 HELIX 31 AD4 LYS B 217 SER B 222 5 6 HELIX 32 AD5 GLN F 8 LYS F 20 1 13 HELIX 33 AD6 GLU F 55 PHE F 57 5 3 HELIX 34 AD7 LEU F 72 LYS F 80 1 9 HELIX 35 AD8 SER F 141 GLY F 155 1 15 HELIX 36 AD9 LEU F 209 THR F 216 1 8 HELIX 37 AE1 LYS F 217 SER F 222 5 6 HELIX 38 AE2 GLY G 9 ILE G 23 1 15 HELIX 39 AE3 GLU G 55 PHE G 57 5 3 HELIX 40 AE4 LEU G 72 LYS G 80 1 9 HELIX 41 AE5 SER G 141 HIS G 153 1 13 HELIX 42 AE6 LEU G 209 THR G 216 1 8 HELIX 43 AE7 LYS G 217 SER G 222 5 6 HELIX 44 AE8 GLY Y 5 ALA Y 14 1 10 HELIX 45 AE9 ASP Y 22 PHE Y 27 5 6 HELIX 46 AF1 ALA Y 35 ILE Y 44 1 10 HELIX 47 AF2 THR Y 61 ASN Y 77 1 17 HELIX 48 AF3 LYS Y 135 MET Y 148 1 14 HELIX 49 AF4 GLU Y 158 ALA Y 169 1 12 HELIX 50 AF5 MET Y 180 PHE Y 185 1 6 HELIX 51 AF6 LEU Y 209 GLY Y 217 1 9 HELIX 52 AF7 GLN Y 220 SER Y 232 1 13 HELIX 53 AF8 LYS Y 244 HIS Y 253 1 10 HELIX 54 AF9 SER Y 255 LEU Y 263 1 9 HELIX 55 AG1 LYS Y 277 GLU Y 285 1 9 HELIX 56 AG2 ASP Y 290 VAL Y 294 5 5 HELIX 57 AG3 GLU Y 304 LYS Y 314 1 11 HELIX 58 AG4 SER Y 317 ARG Y 332 1 16 HELIX 59 AG5 ARG Y 339 PHE Y 343 5 5 SHEET 1 AA1 5 ALA A 545 THR A 548 0 SHEET 2 AA1 5 TRP A 742 LYS A 746 1 O LYS A 744 N THR A 548 SHEET 3 AA1 5 GLY A 721 THR A 726 -1 N LEU A 722 O LEU A 745 SHEET 4 AA1 5 PHE A 563 LYS A 568 -1 N GLU A 566 O MET A 723 SHEET 5 AA1 5 SER A 698 LEU A 699 -1 O LEU A 699 N CYS A 565 SHEET 1 AA2 5 VAL A 584 PHE A 587 0 SHEET 2 AA2 5 GLN A 572 ALA A 578 -1 N HIS A 577 O LYS A 585 SHEET 3 AA2 5 PHE A 616 ALA A 624 -1 O LEU A 618 N ILE A 576 SHEET 4 AA2 5 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 5 AA2 5 GLU A 668 SER A 669 -1 O GLU A 668 N LEU A 665 SHEET 1 AA3 5 VAL A 584 PHE A 587 0 SHEET 2 AA3 5 GLN A 572 ALA A 578 -1 N HIS A 577 O LYS A 585 SHEET 3 AA3 5 PHE A 616 ALA A 624 -1 O LEU A 618 N ILE A 576 SHEET 4 AA3 5 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 5 AA3 5 PHE A 693 PHE A 695 1 O VAL A 694 N LEU A 657 SHEET 1 AA4 6 VAL A 816 LEU A 817 0 SHEET 2 AA4 6 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA4 6 THR A 756 LEU A 766 -1 N ILE A 762 O LEU A 836 SHEET 4 AA4 6 TYR A 775 ASP A 784 -1 O GLY A 776 N TYR A 765 SHEET 5 AA4 6 GLU A 789 LEU A 796 -1 O GLU A 789 N ASP A 784 SHEET 6 AA4 6 VAL A 824 ARG A 825 1 O ARG A 825 N ALA A 792 SHEET 1 AA5 5 VAL A 816 LEU A 817 0 SHEET 2 AA5 5 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA5 5 THR A 756 LEU A 766 -1 N ILE A 762 O LEU A 836 SHEET 4 AA5 5 VAL A 841 LYS A 845 -1 O TRP A 842 N LEU A 759 SHEET 5 AA5 5 ARG A 874 ARG A 879 -1 O ARG A 874 N LYS A 845 SHEET 1 AA6 2 ASP A 848 SER A 850 0 SHEET 2 AA6 2 SER A 869 ARG A 871 -1 O ARG A 871 N ASP A 848 SHEET 1 AA7 9 THR B 59 CYS B 62 0 SHEET 2 AA7 9 PHE B 2 LEU B 6 -1 N GLU B 3 O ARG B 61 SHEET 3 AA7 9 ILE B 87 ALA B 92 -1 O ALA B 92 N PHE B 2 SHEET 4 AA7 9 THR B 98 GLU B 104 -1 O VAL B 102 N THR B 89 SHEET 5 AA7 9 VAL B 111 LYS B 117 -1 O SER B 112 N PHE B 103 SHEET 6 AA7 9 GLY F 176 SER F 183 -1 O ASN F 179 N ASP B 113 SHEET 7 AA7 9 GLY F 166 GLY F 173 -1 N GLY F 173 O GLY F 176 SHEET 8 AA7 9 ALA F 157 ALA F 163 -1 N VAL F 159 O SER F 170 SHEET 9 AA7 9 VAL F 203 ALA F 208 -1 O VAL F 203 N CYS F 162 SHEET 1 AA8 9 LEU B 66 ASN B 71 0 SHEET 2 AA8 9 GLU B 25 SER B 31 -1 N ILE B 30 O LEU B 66 SHEET 3 AA8 9 GLY B 34 MET B 40 -1 O GLY B 34 N SER B 31 SHEET 4 AA8 9 SER B 46 ARG B 53 -1 O LEU B 52 N VAL B 35 SHEET 5 AA8 9 GLY B 245 LEU B 251 -1 O TYR B 250 N LEU B 47 SHEET 6 AA8 9 LEU B 235 ILE B 241 -1 N TYR B 239 O LEU B 247 SHEET 7 AA8 9 THR B 224 MET B 229 -1 N THR B 226 O GLU B 238 SHEET 8 AA8 9 CYS B 135 PRO B 140 -1 N VAL B 137 O LEU B 227 SHEET 9 AA8 9 THR B 196 MET B 199 -1 O GLU B 198 N VAL B 136 SHEET 1 AA9 2 ALA B 157 CYS B 162 0 SHEET 2 AA9 2 VAL B 203 ALA B 208 -1 O VAL B 203 N CYS B 162 SHEET 1 AB1 7 GLY B 166 GLY B 173 0 SHEET 2 AB1 7 GLY B 176 SER B 183 -1 O ILE B 180 N PHE B 169 SHEET 3 AB1 7 LYS G 110 LYS G 117 -1 O ASP G 113 N ASN B 179 SHEET 4 AB1 7 THR G 98 GLU G 104 -1 N PHE G 103 O SER G 112 SHEET 5 AB1 7 ILE G 87 ALA G 92 -1 N ILE G 87 O GLU G 104 SHEET 6 AB1 7 PHE G 2 LEU G 6 -1 N ALA G 4 O LEU G 90 SHEET 7 AB1 7 THR G 59 CYS G 62 -1 O THR G 59 N ARG G 5 SHEET 1 AB2 9 THR F 59 CYS F 62 0 SHEET 2 AB2 9 PHE F 2 LEU F 6 -1 N ARG F 5 O THR F 59 SHEET 3 AB2 9 ILE F 87 ALA F 92 -1 O ALA F 92 N PHE F 2 SHEET 4 AB2 9 THR F 98 GLU F 104 -1 O GLU F 104 N ILE F 87 SHEET 5 AB2 9 VAL F 111 LYS F 117 -1 O SER F 112 N PHE F 103 SHEET 6 AB2 9 GLY G 176 LEU G 182 -1 O ASN G 177 N GLU F 115 SHEET 7 AB2 9 GLY G 166 GLY G 173 -1 N ALA G 171 O GLY G 178 SHEET 8 AB2 9 ALA G 157 ALA G 163 -1 N SER G 161 O LYS G 168 SHEET 9 AB2 9 VAL G 203 ALA G 208 -1 O PHE G 207 N VAL G 158 SHEET 1 AB3 9 LEU F 66 ASN F 71 0 SHEET 2 AB3 9 GLU F 25 SER F 31 -1 N ILE F 30 O LEU F 66 SHEET 3 AB3 9 GLY F 34 MET F 40 -1 O ASN F 36 N ASP F 29 SHEET 4 AB3 9 SER F 46 ARG F 53 -1 O VAL F 48 N SER F 39 SHEET 5 AB3 9 GLY F 245 LEU F 251 -1 O LYS F 248 N GLN F 49 SHEET 6 AB3 9 LEU F 235 ILE F 241 -1 N VAL F 237 O TYR F 249 SHEET 7 AB3 9 THR F 224 MET F 229 -1 N THR F 226 O GLU F 238 SHEET 8 AB3 9 CYS F 135 PRO F 140 -1 N CYS F 135 O MET F 229 SHEET 9 AB3 9 THR F 196 MET F 199 -1 O THR F 196 N LYS F 138 SHEET 1 AB4 9 LEU G 66 ASN G 71 0 SHEET 2 AB4 9 GLU G 25 SER G 31 -1 N ILE G 30 O LEU G 66 SHEET 3 AB4 9 GLY G 34 MET G 40 -1 O GLY G 34 N SER G 31 SHEET 4 AB4 9 SER G 46 ARG G 53 -1 O LEU G 50 N LEU G 37 SHEET 5 AB4 9 GLY G 245 LEU G 251 -1 O LYS G 248 N GLN G 49 SHEET 6 AB4 9 LEU G 235 ILE G 241 -1 N TYR G 239 O LEU G 247 SHEET 7 AB4 9 THR G 224 MET G 229 -1 N SER G 228 O VAL G 236 SHEET 8 AB4 9 CYS G 135 PRO G 140 -1 N CYS G 135 O MET G 229 SHEET 9 AB4 9 THR G 196 MET G 199 -1 O GLU G 198 N VAL G 136 SHEET 1 AB5 2 VAL G 123 LEU G 126 0 SHEET 2 AB5 2 VAL Y 346 LEU Y 350 -1 O GLY Y 348 N GLN G 125 SHEET 1 AB6 3 ILE Y 18 ASN Y 21 0 SHEET 2 AB6 3 ILE Y 204 HIS Y 208 -1 O GLU Y 206 N ARG Y 19 SHEET 3 AB6 3 VAL Y 189 ARG Y 192 -1 N LEU Y 190 O PHE Y 207 SHEET 1 AB7 4 TYR Y 152 ASP Y 154 0 SHEET 2 AB7 4 LYS Y 80 PHE Y 85 1 N PHE Y 85 O LEU Y 153 SHEET 3 AB7 4 LYS Y 30 ASP Y 34 1 N VAL Y 31 O VAL Y 82 SHEET 4 AB7 4 ALA Y 174 ALA Y 176 1 O ALA Y 174 N ALA Y 32 LINK O3' DT H 18 P DOC H 19 1555 1555 1.56 LINK P DG I 20 O1P AMP I 100 1555 1555 1.56 CISPEP 1 PHE A 476 PRO A 477 0 -8.32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000