HEADER TRANSCRIPTION 02-JAN-22 7QP4 TITLE COMPLEX OF A GEMINI-CHOLESTEROL ANALOGUE WITH RETINOID-RELATED ORPHAN TITLE 2 RECEPTOR GAMMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NUCLEAR RECEPTOR RZR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 COMPND 5 GROUP F MEMBER 3,RAR-RELATED ORPHAN RECEPTOR C,RETINOID-RELATED COMPND 6 ORPHAN RECEPTOR-GAMMA; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HIS-VAL-GLU-ARG-LEU-GLN-ILE-PHE-GLN-HIS-LEU-HIS-PRO-ILE- COMPND 10 VAL; COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, ROR, INVERSE AGONIST, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.ROCHEL REVDAT 2 31-JAN-24 7QP4 1 REMARK REVDAT 1 14-DEC-22 7QP4 0 JRNL AUTH U.GOMEZ-BOUZO,A.FALL,J.OSZ,Y.FALL,N.ROCHEL,H.SANTALLA JRNL TITL DEVELOPMENT OF NOVEL GEMINI-CHOLESTEROL ANALOGUES FOR JRNL TITL 2 RETINOID-RELATED ORPHAN RECEPTORS JRNL REF ORG CHEM FRONT V. 9 1522 2022 JRNL REFN ESSN 2052-4129 JRNL DOI 10.1039/D2QO00040G REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 31891 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8300 - 4.6000 1.00 3932 135 0.1621 0.2098 REMARK 3 2 4.6000 - 3.6500 1.00 3881 138 0.1312 0.1960 REMARK 3 3 3.6500 - 3.1900 1.00 3889 136 0.1556 0.2412 REMARK 3 4 3.1900 - 2.9000 1.00 3884 127 0.2012 0.2776 REMARK 3 5 2.9000 - 2.6900 1.00 3848 130 0.2211 0.2773 REMARK 3 6 2.6900 - 2.5300 1.00 3897 134 0.2616 0.2982 REMARK 3 7 2.5300 - 2.4000 1.00 3873 132 0.2905 0.3309 REMARK 3 8 2.4000 - 2.3000 0.94 3634 121 0.3141 0.3800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.1740 -17.0467 -3.7403 REMARK 3 T TENSOR REMARK 3 T11: 0.5467 T22: 0.4596 REMARK 3 T33: 0.5231 T12: 0.0179 REMARK 3 T13: 0.0726 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 4.0178 L22: 8.7401 REMARK 3 L33: 3.9200 L12: 5.1292 REMARK 3 L13: -3.8757 L23: -4.4683 REMARK 3 S TENSOR REMARK 3 S11: -0.4831 S12: -0.0842 S13: -1.1287 REMARK 3 S21: -0.3680 S22: -0.2290 S23: -0.3723 REMARK 3 S31: 0.6517 S32: 0.4692 S33: 0.8320 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3649 5.4094 -13.8512 REMARK 3 T TENSOR REMARK 3 T11: 0.3480 T22: 0.4316 REMARK 3 T33: 0.3778 T12: 0.0407 REMARK 3 T13: 0.1087 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 3.6677 L22: 8.6470 REMARK 3 L33: 1.3249 L12: 4.8975 REMARK 3 L13: -0.1760 L23: -0.6251 REMARK 3 S TENSOR REMARK 3 S11: -0.0752 S12: 0.2318 S13: -0.2443 REMARK 3 S21: -0.2036 S22: 0.0855 S23: -0.6784 REMARK 3 S31: -0.0226 S32: 0.3051 S33: 0.0084 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.0797 -3.8327 -13.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.3767 T22: 0.4724 REMARK 3 T33: 0.3841 T12: -0.0040 REMARK 3 T13: 0.1011 T23: -0.0438 REMARK 3 L TENSOR REMARK 3 L11: 5.0896 L22: 6.4563 REMARK 3 L33: 5.0734 L12: 0.9854 REMARK 3 L13: 0.7168 L23: -1.3936 REMARK 3 S TENSOR REMARK 3 S11: -0.1795 S12: 0.5255 S13: -0.0233 REMARK 3 S21: -0.3933 S22: 0.0937 S23: 0.5142 REMARK 3 S31: 0.1326 S32: -0.2478 S33: 0.1063 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 369 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9042 11.9891 -5.1522 REMARK 3 T TENSOR REMARK 3 T11: 0.4136 T22: 0.3572 REMARK 3 T33: 0.3567 T12: -0.0842 REMARK 3 T13: -0.0217 T23: -0.0567 REMARK 3 L TENSOR REMARK 3 L11: 5.8561 L22: 9.1186 REMARK 3 L33: 8.6273 L12: 0.3142 REMARK 3 L13: -1.6895 L23: -4.9965 REMARK 3 S TENSOR REMARK 3 S11: 0.1172 S12: -0.4750 S13: 0.3412 REMARK 3 S21: 0.7180 S22: 0.0611 S23: -0.1593 REMARK 3 S31: -0.3503 S32: -0.2435 S33: -0.1751 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 411 THROUGH 456 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.7422 -7.9222 -3.6719 REMARK 3 T TENSOR REMARK 3 T11: 0.3382 T22: 0.3328 REMARK 3 T33: 0.3284 T12: 0.0262 REMARK 3 T13: 0.0898 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 8.5420 L22: 4.0248 REMARK 3 L33: 9.1775 L12: 0.3415 REMARK 3 L13: 3.4598 L23: -1.1904 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: 0.1280 S13: -0.0520 REMARK 3 S21: -0.0317 S22: 0.0728 S23: 0.4589 REMARK 3 S31: 0.2001 S32: -0.6636 S33: -0.0282 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 457 THROUGH 497 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7719 6.5461 -10.0997 REMARK 3 T TENSOR REMARK 3 T11: 0.6613 T22: 0.6635 REMARK 3 T33: 0.5749 T12: 0.0711 REMARK 3 T13: -0.0608 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 2.9309 L22: 7.1410 REMARK 3 L33: 3.6690 L12: 0.9256 REMARK 3 L13: -1.7314 L23: -4.8872 REMARK 3 S TENSOR REMARK 3 S11: -0.1508 S12: 0.6729 S13: 0.4926 REMARK 3 S21: -0.5308 S22: 0.5344 S23: 0.4257 REMARK 3 S31: -0.2299 S32: -0.8820 S33: -0.3402 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 264 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.9267 11.9674 -47.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.4880 T22: 0.4849 REMARK 3 T33: 0.4481 T12: 0.0055 REMARK 3 T13: -0.0827 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 5.5159 L22: 4.1765 REMARK 3 L33: 6.7229 L12: -4.7632 REMARK 3 L13: 6.0994 L23: -5.2623 REMARK 3 S TENSOR REMARK 3 S11: -0.5314 S12: -0.6918 S13: 1.1670 REMARK 3 S21: 0.0831 S22: -0.1197 S23: -0.7652 REMARK 3 S31: -0.6352 S32: -0.5853 S33: 0.6920 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 285 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2411 -9.7226 -42.4609 REMARK 3 T TENSOR REMARK 3 T11: 0.3580 T22: 0.5210 REMARK 3 T33: 0.5991 T12: -0.0247 REMARK 3 T13: 0.0429 T23: 0.1131 REMARK 3 L TENSOR REMARK 3 L11: 6.8247 L22: 7.3554 REMARK 3 L33: 4.1463 L12: -3.0642 REMARK 3 L13: 1.1240 L23: -2.5644 REMARK 3 S TENSOR REMARK 3 S11: 0.3646 S12: 0.5814 S13: 0.7957 REMARK 3 S21: -0.6109 S22: -0.8883 S23: -1.7946 REMARK 3 S31: 0.0348 S32: 0.7308 S33: 0.5176 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 313 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6128 -7.5890 -32.6682 REMARK 3 T TENSOR REMARK 3 T11: 0.4574 T22: 0.3636 REMARK 3 T33: 0.3960 T12: -0.0358 REMARK 3 T13: -0.0280 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 8.7858 L22: 4.9934 REMARK 3 L33: 5.8813 L12: -6.0026 REMARK 3 L13: 3.2267 L23: -4.2916 REMARK 3 S TENSOR REMARK 3 S11: -0.5701 S12: -0.7341 S13: 0.6078 REMARK 3 S21: 0.8886 S22: 0.4962 S23: -0.7843 REMARK 3 S31: -0.1774 S32: -0.1363 S33: 0.0139 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 338 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.2631 -1.7119 -38.1672 REMARK 3 T TENSOR REMARK 3 T11: 0.3314 T22: 0.3697 REMARK 3 T33: 0.3839 T12: -0.0376 REMARK 3 T13: -0.0971 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 8.2495 L22: 4.0327 REMARK 3 L33: 9.0017 L12: -2.2313 REMARK 3 L13: -2.8911 L23: -0.6430 REMARK 3 S TENSOR REMARK 3 S11: -0.1461 S12: -0.1330 S13: 0.3136 REMARK 3 S21: 0.1676 S22: 0.1704 S23: 0.2854 REMARK 3 S31: -0.2367 S32: -0.6869 S33: 0.0153 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 369 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5886 -15.1699 -46.5549 REMARK 3 T TENSOR REMARK 3 T11: 0.5251 T22: 0.3380 REMARK 3 T33: 0.3946 T12: 0.0550 REMARK 3 T13: -0.0222 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 8.0539 L22: 6.6550 REMARK 3 L33: 8.1894 L12: -3.4680 REMARK 3 L13: 2.3658 L23: -5.2824 REMARK 3 S TENSOR REMARK 3 S11: 0.2914 S12: 0.6753 S13: -0.1853 REMARK 3 S21: -1.0098 S22: -0.2159 S23: 0.1003 REMARK 3 S31: 0.7106 S32: -0.0837 S33: -0.0722 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 411 THROUGH 456 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.4983 1.7516 -47.6705 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.3633 REMARK 3 T33: 0.2836 T12: -0.0853 REMARK 3 T13: -0.0468 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 7.7057 L22: 3.7552 REMARK 3 L33: 7.8987 L12: -0.9106 REMARK 3 L13: -1.7350 L23: -0.8413 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.1232 S13: -0.0616 REMARK 3 S21: -0.0983 S22: -0.0278 S23: 0.2350 REMARK 3 S31: 0.0976 S32: -0.7566 S33: 0.0456 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 457 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.7345 -3.1963 -58.6926 REMARK 3 T TENSOR REMARK 3 T11: 0.7931 T22: 0.5617 REMARK 3 T33: 0.7121 T12: -0.1176 REMARK 3 T13: -0.0053 T23: 0.0712 REMARK 3 L TENSOR REMARK 3 L11: 2.6825 L22: 2.5848 REMARK 3 L33: 2.8509 L12: 0.9844 REMARK 3 L13: 0.4232 L23: -2.3425 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: -0.5524 S13: -0.0641 REMARK 3 S21: 0.2225 S22: 0.1600 S23: 0.7707 REMARK 3 S31: 1.1522 S32: -0.4472 S33: -0.0080 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 471 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8601 -17.1745 -39.2878 REMARK 3 T TENSOR REMARK 3 T11: 0.9607 T22: 1.1018 REMARK 3 T33: 0.9774 T12: -0.1653 REMARK 3 T13: -0.0021 T23: 0.1784 REMARK 3 L TENSOR REMARK 3 L11: 9.8023 L22: 5.9850 REMARK 3 L33: 5.3830 L12: -3.9333 REMARK 3 L13: 6.0025 L23: -5.1703 REMARK 3 S TENSOR REMARK 3 S11: -0.1498 S12: -1.6189 S13: -1.3724 REMARK 3 S21: -0.2510 S22: 0.5570 S23: 0.0861 REMARK 3 S31: 0.0153 S32: -0.7368 S33: -0.3142 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'P' AND (RESID 479 THROUGH 493 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.3084 -3.5052 -26.8369 REMARK 3 T TENSOR REMARK 3 T11: 1.2197 T22: 1.2946 REMARK 3 T33: 0.6440 T12: -0.2922 REMARK 3 T13: 0.0697 T23: 0.1562 REMARK 3 L TENSOR REMARK 3 L11: 7.1921 L22: 9.0162 REMARK 3 L33: 6.0684 L12: 7.3137 REMARK 3 L13: 4.8212 L23: 2.7659 REMARK 3 S TENSOR REMARK 3 S11: 0.8452 S12: -1.6789 S13: 0.4270 REMARK 3 S21: 1.2616 S22: -1.5098 S23: 1.7911 REMARK 3 S31: 2.6868 S32: -1.5212 S33: 0.3916 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979957 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3L0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M NH4 ACETATE, 0.1M HEPES PH = 7.5, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.10267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.20533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.65400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 107.75667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.55133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 260 REMARK 465 SER A 261 REMARK 465 HIS A 262 REMARK 465 MET A 263 REMARK 465 TYR A 264 REMARK 465 PHE A 498 REMARK 465 PRO A 499 REMARK 465 PRO A 500 REMARK 465 LEU A 501 REMARK 465 TYR A 502 REMARK 465 LYS A 503 REMARK 465 GLU A 504 REMARK 465 LEU A 505 REMARK 465 PHE A 506 REMARK 465 SER A 507 REMARK 465 THR A 508 REMARK 465 GLU A 509 REMARK 465 THR A 510 REMARK 465 GLU A 511 REMARK 465 SER A 512 REMARK 465 PRO A 513 REMARK 465 VAL A 514 REMARK 465 GLY A 515 REMARK 465 LEU A 516 REMARK 465 SER A 517 REMARK 465 LYS A 518 REMARK 465 GLY B 260 REMARK 465 SER B 261 REMARK 465 HIS B 262 REMARK 465 MET B 263 REMARK 465 ILE B 485 REMARK 465 PHE B 486 REMARK 465 GLN B 487 REMARK 465 HIS B 488 REMARK 465 LEU B 489 REMARK 465 HIS B 490 REMARK 465 PRO B 491 REMARK 465 ILE B 492 REMARK 465 VAL B 493 REMARK 465 VAL B 494 REMARK 465 GLN B 495 REMARK 465 ALA B 496 REMARK 465 ALA B 497 REMARK 465 PHE B 498 REMARK 465 PRO B 499 REMARK 465 PRO B 500 REMARK 465 LEU B 501 REMARK 465 TYR B 502 REMARK 465 LYS B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 SER B 507 REMARK 465 THR B 508 REMARK 465 GLU B 509 REMARK 465 THR B 510 REMARK 465 GLU B 511 REMARK 465 SER B 512 REMARK 465 PRO B 513 REMARK 465 VAL B 514 REMARK 465 GLY B 515 REMARK 465 LEU B 516 REMARK 465 SER B 517 REMARK 465 LYS B 518 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 733 O HOH B 780 2.00 REMARK 500 OG SER A 461 O HOH A 701 2.00 REMARK 500 O ARG B 294 O HOH B 701 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 729 O HOH B 771 5554 2.13 REMARK 500 O HOH B 703 O HOH B 716 5554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 286 -56.54 69.88 REMARK 500 HIS A 490 116.94 -177.31 REMARK 500 GLN B 286 -62.68 72.30 REMARK 500 ALA B 428 9.85 -67.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QP4 A 264 518 UNP P51449 RORG_HUMAN 264 518 DBREF 7QP4 B 264 518 UNP P51449 RORG_HUMAN 264 518 DBREF 7QP4 P 479 493 PDB 7QP4 7QP4 479 493 SEQADV 7QP4 GLY A 260 UNP P51449 EXPRESSION TAG SEQADV 7QP4 SER A 261 UNP P51449 EXPRESSION TAG SEQADV 7QP4 HIS A 262 UNP P51449 EXPRESSION TAG SEQADV 7QP4 MET A 263 UNP P51449 EXPRESSION TAG SEQADV 7QP4 GLY B 260 UNP P51449 EXPRESSION TAG SEQADV 7QP4 SER B 261 UNP P51449 EXPRESSION TAG SEQADV 7QP4 HIS B 262 UNP P51449 EXPRESSION TAG SEQADV 7QP4 MET B 263 UNP P51449 EXPRESSION TAG SEQRES 1 A 259 GLY SER HIS MET TYR ALA SER LEU THR GLU ILE GLU HIS SEQRES 2 A 259 LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS SEQRES 3 A 259 GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN SEQRES 4 A 259 ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SEQRES 5 A 259 SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU SEQRES 6 A 259 THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG SEQRES 7 A 259 LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE SEQRES 8 A 259 VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL SEQRES 9 A 259 ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL SEQRES 10 A 259 PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG SEQRES 11 A 259 ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP SEQRES 12 A 259 PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP SEQRES 13 A 259 GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA SEQRES 14 A 259 HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN SEQRES 15 A 259 LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU SEQRES 16 A 259 CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO SEQRES 17 A 259 PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL SEQRES 18 A 259 GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL SEQRES 19 A 259 VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SEQRES 20 A 259 SER THR GLU THR GLU SER PRO VAL GLY LEU SER LYS SEQRES 1 B 259 GLY SER HIS MET TYR ALA SER LEU THR GLU ILE GLU HIS SEQRES 2 B 259 LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS SEQRES 3 B 259 GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN SEQRES 4 B 259 ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SEQRES 5 B 259 SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU SEQRES 6 B 259 THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG SEQRES 7 B 259 LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE SEQRES 8 B 259 VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL SEQRES 9 B 259 ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL SEQRES 10 B 259 PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG SEQRES 11 B 259 ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP SEQRES 12 B 259 PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP SEQRES 13 B 259 GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA SEQRES 14 B 259 HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN SEQRES 15 B 259 LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU SEQRES 16 B 259 CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO SEQRES 17 B 259 PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL SEQRES 18 B 259 GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL SEQRES 19 B 259 VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SEQRES 20 B 259 SER THR GLU THR GLU SER PRO VAL GLY LEU SER LYS SEQRES 1 P 15 HIS VAL GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO SEQRES 2 P 15 ILE VAL HET ACT A 601 4 HET ACT A 602 4 HET ECK A 603 34 HET ACT B 601 4 HET ACT B 602 4 HET ECK B 603 34 HETNAM ACT ACETATE ION HETNAM ECK (3~{S},8~{S},9~{S},10~{R},13~{R},14~{S},17~{R})-17- HETNAM 2 ECK [(6~{R})-2,10-DIMETHYL-2-OXIDANYL-UNDECAN-6-YL]-10,13- HETNAM 3 ECK DIMETHYL-2,3,4,7,8,9,11,12,14,15,16,17-DODECAHYDRO- HETNAM 4 ECK 1~{H}-CYCLOPENTA[A]PHENANTHREN-3-OL FORMUL 4 ACT 4(C2 H3 O2 1-) FORMUL 6 ECK 2(C32 H56 O2) FORMUL 10 HOH *194(H2 O) HELIX 1 AA1 SER A 266 THR A 284 1 19 HELIX 2 AA2 ARG A 288 GLN A 295 1 8 HELIX 3 AA3 SER A 301 LYS A 311 1 11 HELIX 4 AA4 SER A 312 LEU A 338 1 27 HELIX 5 AA5 GLY A 340 LEU A 344 5 5 HELIX 6 AA6 CYS A 345 MET A 365 1 21 HELIX 7 AA7 GLY A 384 GLY A 392 5 9 HELIX 8 AA8 CYS A 393 ALA A 409 1 17 HELIX 9 AA9 SER A 413 ILE A 426 1 14 HELIX 10 AB1 GLU A 435 THR A 457 1 23 HELIX 11 AB2 ARG A 459 LEU A 466 5 8 HELIX 12 AB3 PRO A 468 HIS A 490 1 23 HELIX 13 AB4 SER B 266 CYS B 285 1 20 HELIX 14 AB5 ARG B 288 GLN B 295 1 8 HELIX 15 AB6 ARG B 296 ASN B 298 5 3 HELIX 16 AB7 SER B 301 LYS B 311 1 11 HELIX 17 AB8 SER B 312 LEU B 338 1 27 HELIX 18 AB9 GLY B 340 LEU B 344 5 5 HELIX 19 AC1 CYS B 345 MET B 365 1 21 HELIX 20 AC2 GLY B 384 GLY B 392 5 9 HELIX 21 AC3 CYS B 393 LEU B 410 1 18 HELIX 22 AC4 SER B 413 ILE B 426 1 14 HELIX 23 AC5 GLU B 435 THR B 457 1 23 HELIX 24 AC6 SER B 461 LEU B 466 1 6 HELIX 25 AC7 GLY B 470 VAL B 480 1 11 HELIX 26 AC8 GLU P 481 HIS P 490 1 10 SHEET 1 AA1 3 TYR A 369 ASN A 370 0 SHEET 2 AA1 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 AA1 3 LYS A 381 GLY A 383 -1 O LYS A 381 N PHE A 378 SHEET 1 AA2 3 TYR B 369 ASN B 370 0 SHEET 2 AA2 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 AA2 3 LYS B 381 GLY B 383 -1 O LYS B 381 N PHE B 378 CRYST1 99.381 99.381 129.308 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010062 0.005809 0.000000 0.00000 SCALE2 0.000000 0.011619 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007733 0.00000