HEADER PEPTIDE BINDING PROTEIN 10-JAN-22 7QQM TITLE THE PDZ DOMAIN OF LRRC7 FUSED WITH ANXA2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7,ANNEXIN A2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DENSIN-180,DENSIN,PROTEIN LAP1,ANNEXIN II,ANNEXIN-2, COMPND 5 CALPACTIN I HEAVY CHAIN,CALPACTIN-1 HEAVY CHAIN,CHROMOBINDIN-8, COMPND 6 LIPOCORTIN II,PLACENTAL ANTICOAGULANT PROTEIN IV,PAP-IV,PROTEIN I, COMPND 7 P36; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LRRC7, KIAA1365, LAP1, ANXA2, ANX2, ANX2L4, CAL1H, LPC2D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PDZ, LINEAR MOTIF, CRYSTALLIZATION CHAPERONE, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.COUSIDO-SIAH,G.TRAVE,G.GOGL REVDAT 2 31-JAN-24 7QQM 1 REMARK REVDAT 1 20-APR-22 7QQM 0 JRNL AUTH A.COUSIDO-SIAH,L.CARNEIRO,C.KOSTMANN,P.ECSEDI,L.NYITRAY, JRNL AUTH 2 G.TRAVE,G.GOGL JRNL TITL A SCALABLE STRATEGY TO SOLVE STRUCTURES OF PDZ DOMAINS AND JRNL TITL 2 THEIR COMPLEXES. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 78 509 2022 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 35362473 JRNL DOI 10.1107/S2059798322001784 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2872 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4810 - 4.4130 1.00 2795 147 0.1728 0.1978 REMARK 3 2 4.4130 - 3.5031 1.00 2680 139 0.1394 0.1641 REMARK 3 3 3.5031 - 3.0604 1.00 2639 137 0.1546 0.1969 REMARK 3 4 3.0604 - 2.7807 1.00 2643 139 0.1559 0.1866 REMARK 3 5 2.7807 - 2.5814 1.00 2607 138 0.1703 0.1893 REMARK 3 6 2.5814 - 2.4292 1.00 2602 137 0.1688 0.2047 REMARK 3 7 2.4292 - 2.3075 1.00 2604 136 0.1617 0.2124 REMARK 3 8 2.3075 - 2.2071 1.00 2605 137 0.1652 0.1888 REMARK 3 9 2.2071 - 2.1221 1.00 2582 136 0.1628 0.1675 REMARK 3 10 2.1221 - 2.0489 1.00 2570 136 0.1697 0.1776 REMARK 3 11 2.0489 - 1.9848 1.00 2603 137 0.1738 0.2107 REMARK 3 12 1.9848 - 1.9281 1.00 2582 136 0.1797 0.2047 REMARK 3 13 1.9281 - 1.8773 1.00 2578 136 0.1857 0.2332 REMARK 3 14 1.8773 - 1.8315 1.00 2569 135 0.1901 0.2137 REMARK 3 15 1.8315 - 1.7899 1.00 2572 135 0.1925 0.2096 REMARK 3 16 1.7899 - 1.7518 1.00 2567 135 0.2129 0.2639 REMARK 3 17 1.7518 - 1.7168 1.00 2561 135 0.2186 0.2458 REMARK 3 18 1.7168 - 1.6844 1.00 2576 136 0.2373 0.2659 REMARK 3 19 1.6844 - 1.6543 1.00 2555 134 0.2450 0.2842 REMARK 3 20 1.6543 - 1.6262 1.00 2561 135 0.2566 0.2851 REMARK 3 21 1.6262 - 1.6000 1.00 2574 136 0.2676 0.2806 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1443 THROUGH 1533 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4117 3.8184 22.5650 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.1419 REMARK 3 T33: 0.1364 T12: 0.0123 REMARK 3 T13: 0.0446 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 2.6343 L22: 3.8606 REMARK 3 L33: 2.3048 L12: 0.9565 REMARK 3 L13: 0.0544 L23: -0.6267 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.1190 S13: 0.0908 REMARK 3 S21: 0.2759 S22: 0.0068 S23: 0.2748 REMARK 3 S31: -0.0815 S32: -0.0972 S33: -0.0053 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1534 THROUGH 1621 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2046 20.4767 9.5497 REMARK 3 T TENSOR REMARK 3 T11: 0.1925 T22: 0.1112 REMARK 3 T33: 0.1428 T12: -0.0006 REMARK 3 T13: 0.0248 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.4642 L22: 2.7408 REMARK 3 L33: 2.4320 L12: -0.1199 REMARK 3 L13: -0.0726 L23: 0.1940 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: -0.0589 S13: 0.2431 REMARK 3 S21: -0.0713 S22: -0.0251 S23: 0.0909 REMARK 3 S31: -0.3291 S32: -0.0884 S33: -0.0051 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1622 THROUGH 1703 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2830 4.2133 -13.7120 REMARK 3 T TENSOR REMARK 3 T11: 0.1322 T22: 0.1586 REMARK 3 T33: 0.1068 T12: 0.0055 REMARK 3 T13: -0.0028 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.1950 L22: 5.1970 REMARK 3 L33: 2.1792 L12: 1.7142 REMARK 3 L13: 0.3236 L23: 0.8501 REMARK 3 S TENSOR REMARK 3 S11: -0.0648 S12: 0.1080 S13: 0.0619 REMARK 3 S21: -0.2181 S22: 0.1733 S23: -0.0425 REMARK 3 S31: -0.1783 S32: 0.0784 S33: -0.1165 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1704 THROUGH 1855 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1976 -9.8829 -3.1298 REMARK 3 T TENSOR REMARK 3 T11: 0.1541 T22: 0.1392 REMARK 3 T33: 0.1608 T12: 0.0027 REMARK 3 T13: 0.0173 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.7731 L22: 1.0367 REMARK 3 L33: 0.9152 L12: 0.4982 REMARK 3 L13: 0.3473 L23: 0.3759 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: 0.0765 S13: -0.0822 REMARK 3 S21: -0.0221 S22: 0.0499 S23: -0.0126 REMARK 3 S31: 0.0595 S32: 0.0340 S33: -0.0166 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57570 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 45.481 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N7D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M POTASSIUM THIOCYANATE 0.1 M REMARK 280 SODIUM BROMIDE 0.1 M MES 6.5 12 % V/V PEG SMEAR HIGH, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.89000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.22000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.22000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.89000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 1442 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1454 64.75 -162.96 REMARK 500 SER A1466 -6.71 -53.15 REMARK 500 ASN A1525 -53.38 71.92 REMARK 500 VAL A1567 122.42 68.03 REMARK 500 ASN A1781 92.55 -161.52 REMARK 500 VAL A1814 -73.26 -119.49 REMARK 500 ASP A1815 32.94 -140.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A1566 O REMARK 620 2 VAL A1567 O 67.5 REMARK 620 3 GLU A1569 OE1 128.7 75.0 REMARK 620 4 GLU A1569 OE2 86.6 80.0 52.6 REMARK 620 5 HOH A2203 O 152.7 139.7 71.2 96.0 REMARK 620 6 HOH A2254 O 120.4 72.5 77.2 127.6 79.1 REMARK 620 7 HOH A2386 O 83.0 119.0 147.5 152.0 82.2 79.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A1604 O REMARK 620 2 LEU A1607 O 83.0 REMARK 620 3 GLU A1612 OE1 99.0 71.8 REMARK 620 4 HOH A2127 O 94.6 150.9 80.0 REMARK 620 5 HOH A2217 O 96.0 70.6 137.2 138.3 REMARK 620 6 HOH A2339 O 79.8 126.7 160.6 80.8 61.7 REMARK 620 7 HOH A2369 O 173.4 103.2 81.3 79.0 88.1 97.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A1718 O REMARK 620 2 ARG A1721 O 77.4 REMARK 620 3 GLY A1723 O 96.3 84.7 REMARK 620 4 GLU A1763 OE1 83.5 152.2 77.4 REMARK 620 5 GLU A1763 OE2 84.9 143.2 129.5 52.5 REMARK 620 6 HOH A2289 O 100.0 76.7 151.8 127.0 75.0 REMARK 620 7 HOH A2356 O 168.9 113.1 81.5 85.4 88.2 86.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1904 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A1750 OG REMARK 620 2 MET A1794 O 79.9 REMARK 620 3 GLY A1796 O 79.4 4.1 REMARK 620 4 GLY A1798 O 76.4 3.8 4.0 REMARK 620 5 ASP A1838 OD1 81.1 2.4 6.5 5.9 REMARK 620 6 ASP A1838 OD2 78.1 3.0 6.6 4.1 3.0 REMARK 620 7 HOH A2271 O 79.8 1.0 3.1 3.5 3.4 3.8 REMARK 620 N 1 2 3 4 5 6 DBREF 7QQM A 1445 1536 UNP Q96NW7 LRRC7_HUMAN 1445 1536 DBREF 7QQM A 1539 1855 UNP P07355 ANXA2_HUMAN 23 339 SEQADV 7QQM HIS A 1442 UNP Q96NW7 EXPRESSION TAG SEQADV 7QQM MET A 1443 UNP Q96NW7 EXPRESSION TAG SEQADV 7QQM GLY A 1444 UNP Q96NW7 EXPRESSION TAG SEQADV 7QQM GLY A 1537 UNP Q96NW7 LINKER SEQADV 7QQM SER A 1538 UNP Q96NW7 LINKER SEQADV 7QQM GLU A 1582 UNP P07355 ALA 66 ENGINEERED MUTATION SEQRES 1 A 414 HIS MET GLY GLU GLN PHE CYS VAL ARG ILE GLU LYS ASN SEQRES 2 A 414 PRO GLY LEU GLY PHE SER ILE SER GLY GLY ILE SER GLY SEQRES 3 A 414 GLN GLY ASN PRO PHE LYS PRO SER ASP LYS GLY ILE PHE SEQRES 4 A 414 VAL THR ARG VAL GLN PRO ASP GLY PRO ALA SER ASN LEU SEQRES 5 A 414 LEU GLN PRO GLY ASP LYS ILE LEU GLN ALA ASN GLY HIS SEQRES 6 A 414 SER PHE VAL HIS MET GLU HIS GLU LYS ALA VAL LEU LEU SEQRES 7 A 414 LEU LYS SER PHE GLN ASN THR VAL ASP LEU VAL ILE GLN SEQRES 8 A 414 ARG GLU LEU THR GLY SER ALA TYR GLY SER VAL LYS ALA SEQRES 9 A 414 TYR THR ASN PHE ASP ALA GLU ARG ASP ALA LEU ASN ILE SEQRES 10 A 414 GLU THR ALA ILE LYS THR LYS GLY VAL ASP GLU VAL THR SEQRES 11 A 414 ILE VAL ASN ILE LEU THR ASN ARG SER ASN GLU GLN ARG SEQRES 12 A 414 GLN ASP ILE ALA PHE ALA TYR GLN ARG ARG THR LYS LYS SEQRES 13 A 414 GLU LEU ALA SER ALA LEU LYS SER ALA LEU SER GLY HIS SEQRES 14 A 414 LEU GLU THR VAL ILE LEU GLY LEU LEU LYS THR PRO ALA SEQRES 15 A 414 GLN TYR ASP ALA SER GLU LEU LYS ALA SER MET LYS GLY SEQRES 16 A 414 LEU GLY THR ASP GLU ASP SER LEU ILE GLU ILE ILE CYS SEQRES 17 A 414 SER ARG THR ASN GLN GLU LEU GLN GLU ILE ASN ARG VAL SEQRES 18 A 414 TYR LYS GLU MET TYR LYS THR ASP LEU GLU LYS ASP ILE SEQRES 19 A 414 ILE SER ASP THR SER GLY ASP PHE ARG LYS LEU MET VAL SEQRES 20 A 414 ALA LEU ALA LYS GLY ARG ARG ALA GLU ASP GLY SER VAL SEQRES 21 A 414 ILE ASP TYR GLU LEU ILE ASP GLN ASP ALA ARG ASP LEU SEQRES 22 A 414 TYR ASP ALA GLY VAL LYS ARG LYS GLY THR ASP VAL PRO SEQRES 23 A 414 LYS TRP ILE SER ILE MET THR GLU ARG SER VAL PRO HIS SEQRES 24 A 414 LEU GLN LYS VAL PHE ASP ARG TYR LYS SER TYR SER PRO SEQRES 25 A 414 TYR ASP MET LEU GLU SER ILE ARG LYS GLU VAL LYS GLY SEQRES 26 A 414 ASP LEU GLU ASN ALA PHE LEU ASN LEU VAL GLN CYS ILE SEQRES 27 A 414 GLN ASN LYS PRO LEU TYR PHE ALA ASP ARG LEU TYR ASP SEQRES 28 A 414 SER MET LYS GLY LYS GLY THR ARG ASP LYS VAL LEU ILE SEQRES 29 A 414 ARG ILE MET VAL SER ARG SER GLU VAL ASP MET LEU LYS SEQRES 30 A 414 ILE ARG SER GLU PHE LYS ARG LYS TYR GLY LYS SER LEU SEQRES 31 A 414 TYR TYR TYR ILE GLN GLN ASP THR LYS GLY ASP TYR GLN SEQRES 32 A 414 LYS ALA LEU LEU TYR LEU CYS GLY GLY ASP ASP HET CA A1901 1 HET CA A1902 1 HET CA A1903 1 HET CA A1904 1 HET GOL A1905 12 HET GOL A1906 6 HET GOL A1907 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA 4(CA 2+) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 9 HOH *499(H2 O) HELIX 1 AA1 GLU A 1512 PHE A 1523 1 12 HELIX 2 AA2 THR A 1547 THR A 1564 1 18 HELIX 3 AA3 ASP A 1568 THR A 1577 1 10 HELIX 4 AA4 SER A 1580 LYS A 1596 1 17 HELIX 5 AA5 GLU A 1598 LEU A 1607 1 10 HELIX 6 AA6 SER A 1608 LYS A 1620 1 13 HELIX 7 AA7 THR A 1621 LEU A 1637 1 17 HELIX 8 AA8 ASP A 1640 ARG A 1651 1 12 HELIX 9 AA9 THR A 1652 LYS A 1668 1 17 HELIX 10 AB1 ASP A 1670 THR A 1679 1 10 HELIX 11 AB2 SER A 1680 LYS A 1692 1 13 HELIX 12 AB3 ASP A 1703 ALA A 1717 1 15 HELIX 13 AB4 ASP A 1725 ARG A 1736 1 12 HELIX 14 AB5 SER A 1737 SER A 1752 1 16 HELIX 15 AB6 ASP A 1755 VAL A 1764 1 10 HELIX 16 AB7 LYS A 1765 ASN A 1781 1 17 HELIX 17 AB8 ASN A 1781 LYS A 1795 1 15 HELIX 18 AB9 ARG A 1800 SER A 1812 1 13 HELIX 19 AC1 ASP A 1815 GLY A 1828 1 14 HELIX 20 AC2 SER A 1830 THR A 1839 1 10 HELIX 21 AC3 LYS A 1840 GLY A 1852 1 13 SHEET 1 AA1 5 GLU A1445 GLU A1452 0 SHEET 2 AA1 5 THR A1526 ARG A1533 -1 O ILE A1531 N PHE A1447 SHEET 3 AA1 5 LYS A1499 ALA A1503 -1 N LEU A1501 O VAL A1530 SHEET 4 AA1 5 ILE A1479 VAL A1484 -1 N ILE A1479 O ILE A1500 SHEET 5 AA1 5 PHE A1459 GLY A1463 -1 N SER A1462 O PHE A1480 SHEET 1 AA2 4 GLU A1445 GLU A1452 0 SHEET 2 AA2 4 THR A1526 ARG A1533 -1 O ILE A1531 N PHE A1447 SHEET 3 AA2 4 LYS A1499 ALA A1503 -1 N LEU A1501 O VAL A1530 SHEET 4 AA2 4 HIS A1506 SER A1507 -1 O HIS A1506 N ALA A1503 LINK O GLY A1566 CA CA A1901 1555 1555 2.45 LINK O VAL A1567 CA CA A1901 1555 1555 2.52 LINK OE1 GLU A1569 CA CA A1901 1555 1555 2.44 LINK OE2 GLU A1569 CA CA A1901 1555 1555 2.51 LINK O LYS A1604 CA CA A1902 1555 1555 2.33 LINK O LEU A1607 CA CA A1902 1555 1555 2.52 LINK OE1 GLU A1612 CA CA A1902 1555 1555 2.40 LINK O GLY A1718 CA CA A1903 1555 1555 2.38 LINK O ARG A1721 CA CA A1903 1555 1555 2.37 LINK O GLY A1723 CA CA A1903 1555 1555 2.42 LINK OG SER A1750 CA CA A1904 1555 4445 2.37 LINK OE1 GLU A1763 CA CA A1903 1555 1555 2.40 LINK OE2 GLU A1763 CA CA A1903 1555 1555 2.55 LINK O MET A1794 CA CA A1904 1555 1555 2.41 LINK O GLY A1796 CA CA A1904 1555 1555 2.39 LINK O GLY A1798 CA CA A1904 1555 1555 2.38 LINK OD1 ASP A1838 CA CA A1904 1555 1555 2.47 LINK OD2 ASP A1838 CA CA A1904 1555 1555 2.50 LINK CA CA A1901 O HOH A2203 1555 1555 2.47 LINK CA CA A1901 O HOH A2254 1555 1555 2.45 LINK CA CA A1901 O HOH A2386 1555 1555 2.58 LINK CA CA A1902 O HOH A2127 1555 1555 2.50 LINK CA CA A1902 O HOH A2217 1555 1555 2.49 LINK CA CA A1902 O HOH A2339 1555 1555 2.50 LINK CA CA A1902 O HOH A2369 1555 1555 2.50 LINK CA CA A1903 O HOH A2289 1555 1555 2.45 LINK CA CA A1903 O HOH A2356 1555 1555 2.42 LINK CA CA A1904 O HOH A2271 1555 4545 2.43 CISPEP 1 ASN A 1454 PRO A 1455 0 -0.75 CRYST1 59.780 70.080 102.440 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016728 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014269 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009762 0.00000