HEADER LIGASE 12-JAN-22 7QS0 TITLE CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM10 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIPARTITE MOTIF-CONTAINING PROTEIN 10; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: B30-RING FINGER PROTEIN,RING FINGER PROTEIN 9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIM10, RFB30, RNF9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: -R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS E3, TRIM, TRIM10, B30.2 DOMAIN, SPRY DOMAIN, PRYSPRY DOMAIN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 31-JAN-24 7QS0 1 REMARK REVDAT 1 04-MAY-22 7QS0 0 JRNL AUTH A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM10 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 21014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1155 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1581 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4214 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.31000 REMARK 3 B22 (A**2) : 1.31000 REMARK 3 B33 (A**2) : -4.25000 REMARK 3 B12 (A**2) : 0.65000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.513 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.272 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.236 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.474 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4359 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3998 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5931 ; 1.295 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9173 ; 1.148 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 529 ; 8.788 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 247 ;28.278 ;20.040 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 669 ;13.769 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;22.358 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 546 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4955 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1117 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 306 480 B 306 480 5326 0.090 0.050 REMARK 3 2 A 306 480 C 306 480 5160 0.110 0.050 REMARK 3 3 B 306 481 C 306 481 5173 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 305 A 344 REMARK 3 ORIGIN FOR THE GROUP (A): 48.2903 -24.9849 -4.4010 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.0741 REMARK 3 T33: 0.1037 T12: 0.0347 REMARK 3 T13: -0.0043 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.9065 L22: 2.4412 REMARK 3 L33: 5.7898 L12: 0.3402 REMARK 3 L13: -0.5783 L23: -1.5457 REMARK 3 S TENSOR REMARK 3 S11: -0.0177 S12: 0.2286 S13: -0.1390 REMARK 3 S21: -0.2787 S22: -0.0524 S23: -0.2221 REMARK 3 S31: 0.4647 S32: 0.5003 S33: 0.0701 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 345 A 481 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4226 -19.7721 2.5741 REMARK 3 T TENSOR REMARK 3 T11: 0.0013 T22: 0.0202 REMARK 3 T33: 0.0114 T12: 0.0025 REMARK 3 T13: -0.0006 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.7368 L22: 2.3079 REMARK 3 L33: 4.2784 L12: 0.1735 REMARK 3 L13: -1.4757 L23: -0.7542 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: 0.0979 S13: 0.0482 REMARK 3 S21: 0.0068 S22: 0.0669 S23: 0.1244 REMARK 3 S31: 0.0017 S32: -0.1219 S33: -0.0776 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 306 B 409 REMARK 3 ORIGIN FOR THE GROUP (A): 56.7940 -42.0340 28.4604 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.0556 REMARK 3 T33: 0.0323 T12: 0.0203 REMARK 3 T13: 0.0212 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 3.2025 L22: 2.9652 REMARK 3 L33: 5.1069 L12: -0.0702 REMARK 3 L13: -1.5969 L23: 0.4228 REMARK 3 S TENSOR REMARK 3 S11: -0.2803 S12: -0.2881 S13: -0.1397 REMARK 3 S21: 0.2466 S22: 0.1501 S23: 0.1095 REMARK 3 S31: 0.4657 S32: 0.1647 S33: 0.1302 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 410 B 481 REMARK 3 ORIGIN FOR THE GROUP (A): 61.6847 -35.1335 20.0604 REMARK 3 T TENSOR REMARK 3 T11: 0.0660 T22: 0.0923 REMARK 3 T33: 0.0360 T12: -0.0564 REMARK 3 T13: -0.0116 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 1.8995 L22: 2.4533 REMARK 3 L33: 4.8570 L12: -0.9976 REMARK 3 L13: -0.8756 L23: 0.7059 REMARK 3 S TENSOR REMARK 3 S11: -0.1174 S12: 0.0087 S13: 0.1793 REMARK 3 S21: -0.0082 S22: 0.1695 S23: -0.1302 REMARK 3 S31: 0.0085 S32: 0.3124 S33: -0.0521 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 306 C 331 REMARK 3 ORIGIN FOR THE GROUP (A): 52.3015 -9.4318 25.1300 REMARK 3 T TENSOR REMARK 3 T11: 0.4371 T22: 0.4297 REMARK 3 T33: 0.3095 T12: -0.0292 REMARK 3 T13: 0.0347 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 4.1702 L22: 3.7503 REMARK 3 L33: 0.5402 L12: 0.5239 REMARK 3 L13: -0.6421 L23: -1.2864 REMARK 3 S TENSOR REMARK 3 S11: -0.2184 S12: 0.5932 S13: -0.1083 REMARK 3 S21: -0.4465 S22: 0.1894 S23: 0.1218 REMARK 3 S31: 0.1817 S32: -0.2429 S33: 0.0291 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 332 C 481 REMARK 3 ORIGIN FOR THE GROUP (A): 61.4503 -1.9869 24.6819 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.1988 REMARK 3 T33: 0.1141 T12: -0.0694 REMARK 3 T13: 0.0066 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 2.8073 L22: 3.5725 REMARK 3 L33: 3.8679 L12: -1.1227 REMARK 3 L13: -0.8013 L23: 0.4244 REMARK 3 S TENSOR REMARK 3 S11: -0.0758 S12: -0.2977 S13: 0.1357 REMARK 3 S21: -0.1033 S22: 0.1075 S23: -0.1152 REMARK 3 S31: -0.0797 S32: -0.1573 S33: -0.0317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7QS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00002 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.35100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UMB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ETHYLENE GLYCOL, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.87467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.43733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 304 REMARK 465 GLU B 304 REMARK 465 LEU B 305 REMARK 465 GLU C 304 REMARK 465 LEU C 305 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 305 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 335 O LYS B 337 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 350 -54.39 -121.52 REMARK 500 HIS A 375 57.16 -149.98 REMARK 500 GLU B 393 99.98 -69.57 REMARK 500 ASN C 340 68.58 -66.48 REMARK 500 ARG C 350 -54.23 -122.31 REMARK 500 HIS C 375 67.63 -151.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QS0 A 304 481 UNP Q9UDY6 TRI10_HUMAN 304 481 DBREF 7QS0 B 304 481 UNP Q9UDY6 TRI10_HUMAN 304 481 DBREF 7QS0 C 304 481 UNP Q9UDY6 TRI10_HUMAN 304 481 SEQRES 1 A 178 GLU LEU ASP TYR GLU PRO ALA HIS ILE SER LEU ASP PRO SEQRES 2 A 178 GLN THR SER HIS PRO LYS LEU LEU LEU SER GLU ASP HIS SEQRES 3 A 178 GLN ARG ALA GLN PHE SER TYR LYS TRP GLN ASN SER PRO SEQRES 4 A 178 ASP ASN PRO GLN ARG PHE ASP ARG ALA THR CYS VAL LEU SEQRES 5 A 178 ALA HIS THR GLY ILE THR GLY GLY ARG HIS THR TRP VAL SEQRES 6 A 178 VAL SER ILE ASP LEU ALA HIS GLY GLY SER CYS THR VAL SEQRES 7 A 178 GLY VAL VAL SER GLU ASP VAL GLN ARG LYS GLY GLU LEU SEQRES 8 A 178 ARG LEU ARG PRO GLU GLU GLY VAL TRP ALA VAL ARG LEU SEQRES 9 A 178 ALA TRP GLY PHE VAL SER ALA LEU GLY SER PHE PRO THR SEQRES 10 A 178 ARG LEU THR LEU LYS GLU GLN PRO ARG GLN VAL ARG VAL SEQRES 11 A 178 SER LEU ASP TYR GLU VAL GLY TRP VAL THR PHE THR ASN SEQRES 12 A 178 ALA VAL THR ARG GLU PRO ILE TYR THR PHE THR ALA SER SEQRES 13 A 178 PHE THR ARG LYS VAL ILE PRO PHE PHE GLY LEU TRP GLY SEQRES 14 A 178 ARG GLY SER SER PHE SER LEU SER SER SEQRES 1 B 178 GLU LEU ASP TYR GLU PRO ALA HIS ILE SER LEU ASP PRO SEQRES 2 B 178 GLN THR SER HIS PRO LYS LEU LEU LEU SER GLU ASP HIS SEQRES 3 B 178 GLN ARG ALA GLN PHE SER TYR LYS TRP GLN ASN SER PRO SEQRES 4 B 178 ASP ASN PRO GLN ARG PHE ASP ARG ALA THR CYS VAL LEU SEQRES 5 B 178 ALA HIS THR GLY ILE THR GLY GLY ARG HIS THR TRP VAL SEQRES 6 B 178 VAL SER ILE ASP LEU ALA HIS GLY GLY SER CYS THR VAL SEQRES 7 B 178 GLY VAL VAL SER GLU ASP VAL GLN ARG LYS GLY GLU LEU SEQRES 8 B 178 ARG LEU ARG PRO GLU GLU GLY VAL TRP ALA VAL ARG LEU SEQRES 9 B 178 ALA TRP GLY PHE VAL SER ALA LEU GLY SER PHE PRO THR SEQRES 10 B 178 ARG LEU THR LEU LYS GLU GLN PRO ARG GLN VAL ARG VAL SEQRES 11 B 178 SER LEU ASP TYR GLU VAL GLY TRP VAL THR PHE THR ASN SEQRES 12 B 178 ALA VAL THR ARG GLU PRO ILE TYR THR PHE THR ALA SER SEQRES 13 B 178 PHE THR ARG LYS VAL ILE PRO PHE PHE GLY LEU TRP GLY SEQRES 14 B 178 ARG GLY SER SER PHE SER LEU SER SER SEQRES 1 C 178 GLU LEU ASP TYR GLU PRO ALA HIS ILE SER LEU ASP PRO SEQRES 2 C 178 GLN THR SER HIS PRO LYS LEU LEU LEU SER GLU ASP HIS SEQRES 3 C 178 GLN ARG ALA GLN PHE SER TYR LYS TRP GLN ASN SER PRO SEQRES 4 C 178 ASP ASN PRO GLN ARG PHE ASP ARG ALA THR CYS VAL LEU SEQRES 5 C 178 ALA HIS THR GLY ILE THR GLY GLY ARG HIS THR TRP VAL SEQRES 6 C 178 VAL SER ILE ASP LEU ALA HIS GLY GLY SER CYS THR VAL SEQRES 7 C 178 GLY VAL VAL SER GLU ASP VAL GLN ARG LYS GLY GLU LEU SEQRES 8 C 178 ARG LEU ARG PRO GLU GLU GLY VAL TRP ALA VAL ARG LEU SEQRES 9 C 178 ALA TRP GLY PHE VAL SER ALA LEU GLY SER PHE PRO THR SEQRES 10 C 178 ARG LEU THR LEU LYS GLU GLN PRO ARG GLN VAL ARG VAL SEQRES 11 C 178 SER LEU ASP TYR GLU VAL GLY TRP VAL THR PHE THR ASN SEQRES 12 C 178 ALA VAL THR ARG GLU PRO ILE TYR THR PHE THR ALA SER SEQRES 13 C 178 PHE THR ARG LYS VAL ILE PRO PHE PHE GLY LEU TRP GLY SEQRES 14 C 178 ARG GLY SER SER PHE SER LEU SER SER HET EDO A 501 4 HET EDO A 502 4 HET EDO A 503 4 HET EDO B 501 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 EDO 4(C2 H6 O2) FORMUL 8 HOH *76(H2 O) HELIX 1 AA1 ARG A 397 GLU A 400 5 4 HELIX 2 AA2 ARG B 397 GLU B 400 5 4 HELIX 3 AA3 ARG C 397 GLU C 400 5 4 SHEET 1 AA1 5 GLU A 308 PRO A 309 0 SHEET 2 AA1 5 ARG A 364 LEU A 373 1 O ARG A 364 N GLU A 308 SHEET 3 AA1 5 SER A 475 SER A 480 -1 O SER A 478 N SER A 370 SHEET 4 AA1 5 ARG A 331 PHE A 334 -1 N PHE A 334 O SER A 475 SHEET 5 AA1 5 LEU A 323 LEU A 325 -1 N LEU A 324 O GLN A 333 SHEET 1 AA2 5 GLU A 308 PRO A 309 0 SHEET 2 AA2 5 ARG A 364 LEU A 373 1 O ARG A 364 N GLU A 308 SHEET 3 AA2 5 GLN A 430 ASP A 436 -1 O LEU A 435 N HIS A 365 SHEET 4 AA2 5 TRP A 441 ASN A 446 -1 O THR A 445 N ARG A 432 SHEET 5 AA2 5 PRO A 452 THR A 457 -1 O TYR A 454 N PHE A 444 SHEET 1 AA3 6 CYS A 353 LEU A 355 0 SHEET 2 AA3 6 VAL A 464 TRP A 471 -1 O PHE A 468 N VAL A 354 SHEET 3 AA3 6 SER A 378 SER A 385 -1 N VAL A 384 O ILE A 465 SHEET 4 AA3 6 VAL A 402 ALA A 408 -1 O LEU A 407 N CYS A 379 SHEET 5 AA3 6 PHE A 411 ALA A 414 -1 O SER A 413 N ARG A 406 SHEET 6 AA3 6 THR A 420 LEU A 422 -1 O LEU A 422 N VAL A 412 SHEET 1 AA4 5 GLU B 308 PRO B 309 0 SHEET 2 AA4 5 ARG B 364 LEU B 373 1 O ARG B 364 N GLU B 308 SHEET 3 AA4 5 SER B 475 SER B 480 -1 O SER B 478 N SER B 370 SHEET 4 AA4 5 ARG B 331 PHE B 334 -1 N PHE B 334 O SER B 475 SHEET 5 AA4 5 LEU B 323 LEU B 325 -1 N LEU B 324 O GLN B 333 SHEET 1 AA5 5 GLU B 308 PRO B 309 0 SHEET 2 AA5 5 ARG B 364 LEU B 373 1 O ARG B 364 N GLU B 308 SHEET 3 AA5 5 GLN B 430 ASP B 436 -1 O LEU B 435 N HIS B 365 SHEET 4 AA5 5 TRP B 441 ASN B 446 -1 O THR B 445 N ARG B 432 SHEET 5 AA5 5 PRO B 452 THR B 457 -1 O TYR B 454 N PHE B 444 SHEET 1 AA6 6 CYS B 353 LEU B 355 0 SHEET 2 AA6 6 VAL B 464 TRP B 471 -1 O PHE B 468 N VAL B 354 SHEET 3 AA6 6 SER B 378 SER B 385 -1 N VAL B 384 O ILE B 465 SHEET 4 AA6 6 VAL B 402 ALA B 408 -1 O LEU B 407 N CYS B 379 SHEET 5 AA6 6 PHE B 411 ALA B 414 -1 O PHE B 411 N ALA B 408 SHEET 6 AA6 6 THR B 420 LEU B 422 -1 O LEU B 422 N VAL B 412 SHEET 1 AA7 5 GLU C 308 PRO C 309 0 SHEET 2 AA7 5 ARG C 364 ASP C 372 1 O THR C 366 N GLU C 308 SHEET 3 AA7 5 SER C 476 SER C 480 -1 O SER C 478 N SER C 370 SHEET 4 AA7 5 ARG C 331 PHE C 334 -1 N ALA C 332 O PHE C 477 SHEET 5 AA7 5 LEU C 323 LEU C 325 -1 N LEU C 324 O GLN C 333 SHEET 1 AA8 5 GLU C 308 PRO C 309 0 SHEET 2 AA8 5 ARG C 364 ASP C 372 1 O THR C 366 N GLU C 308 SHEET 3 AA8 5 GLN C 430 ASP C 436 -1 O LEU C 435 N HIS C 365 SHEET 4 AA8 5 TRP C 441 ASN C 446 -1 O THR C 445 N ARG C 432 SHEET 5 AA8 5 PRO C 452 THR C 457 -1 O TYR C 454 N PHE C 444 SHEET 1 AA9 6 CYS C 353 LEU C 355 0 SHEET 2 AA9 6 VAL C 464 TRP C 471 -1 O PHE C 468 N VAL C 354 SHEET 3 AA9 6 SER C 378 SER C 385 -1 N VAL C 384 O ILE C 465 SHEET 4 AA9 6 VAL C 402 ALA C 408 -1 O LEU C 407 N CYS C 379 SHEET 5 AA9 6 PHE C 411 LEU C 415 -1 O SER C 413 N ARG C 406 SHEET 6 AA9 6 THR C 420 ARG C 421 -1 O THR C 420 N ALA C 414 CRYST1 65.991 65.991 103.312 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015154 0.008749 0.000000 0.00000 SCALE2 0.000000 0.017498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009679 0.00000