HEADER LIGASE 12-JAN-22 7QS3 TITLE CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIPARTITE MOTIF-CONTAINING PROTEIN 16; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: E3 UBIQUITIN-PROTEIN LIGASE TRIM16,ESTROGEN-RESPONSIVE B BOX COMPND 5 PROTEIN; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIM16, EBBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: -R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGTVL2 KEYWDS E3, TRIM, TRIM16, B30.2 DOMAIN, SPRY DOMAIN, PRYSPRY DOMAIN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,R.ZHUBI,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 31-JAN-24 7QS3 1 REMARK REVDAT 1 04-MAY-22 7QS3 0 JRNL AUTH A.CHAIKUAD,R.ZHUBI,S.KNAPP, JRNL AUTH 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM16 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1246 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1829 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1604 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.40000 REMARK 3 B22 (A**2) : 1.40000 REMARK 3 B33 (A**2) : -2.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.612 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1727 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1583 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2320 ; 1.448 ; 1.671 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3649 ; 1.331 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 200 ; 7.931 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;28.414 ;21.818 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 272 ;12.633 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.196 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 206 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1911 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 431 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 358 A 375 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5337 43.7987 48.6196 REMARK 3 T TENSOR REMARK 3 T11: 0.1617 T22: 0.2056 REMARK 3 T33: 0.2235 T12: 0.0886 REMARK 3 T13: -0.0236 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 4.4768 L22: 5.9840 REMARK 3 L33: 9.9859 L12: 0.7490 REMARK 3 L13: 0.4595 L23: -2.8799 REMARK 3 S TENSOR REMARK 3 S11: -0.1752 S12: 0.4030 S13: 0.6331 REMARK 3 S21: -0.6131 S22: 0.1453 S23: 0.3943 REMARK 3 S31: -0.2892 S32: -0.4375 S33: 0.0299 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 376 A 537 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9249 28.0373 55.3764 REMARK 3 T TENSOR REMARK 3 T11: 0.0043 T22: 0.0687 REMARK 3 T33: 0.0067 T12: 0.0048 REMARK 3 T13: -0.0027 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.1216 L22: 2.0629 REMARK 3 L33: 2.4220 L12: -0.0706 REMARK 3 L13: 0.1773 L23: -0.7727 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.0649 S13: 0.0216 REMARK 3 S21: -0.0816 S22: 0.0522 S23: 0.0880 REMARK 3 S31: 0.0094 S32: -0.2562 S33: -0.0814 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 538 A 550 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3488 34.9866 64.1038 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.1527 REMARK 3 T33: 0.1157 T12: -0.0136 REMARK 3 T13: 0.0070 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 5.9706 L22: 4.2805 REMARK 3 L33: 1.0430 L12: -3.7950 REMARK 3 L13: 1.0549 L23: -0.7430 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: -0.0065 S13: 0.2859 REMARK 3 S21: 0.1218 S22: -0.0235 S23: -0.0986 REMARK 3 S31: -0.1309 S32: -0.0793 S33: 0.0523 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7QS3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26339 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 45.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.99200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6FLM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 10% ETHYLENE GLYCOL, 0.1M REMARK 280 BIS-TRIS-PROPANE PH 6.5, 0.2M SODIUM BROMIDE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.80100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.86500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.86500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 119.70150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.86500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.86500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.90050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.86500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.86500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 119.70150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.86500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.86500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.90050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.80100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 350 REMARK 465 MET A 351 REMARK 465 GLN A 352 REMARK 465 ARG A 353 REMARK 465 LYS A 354 REMARK 465 TYR A 355 REMARK 465 TRP A 356 REMARK 465 THR A 357 REMARK 465 GLU A 551 REMARK 465 PRO A 552 REMARK 465 GLU A 553 REMARK 465 LYS A 554 REMARK 465 PRO A 555 REMARK 465 ALA A 556 REMARK 465 PRO A 557 REMARK 465 SER A 558 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 457 O HOH A 701 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 363 -57.41 -127.86 REMARK 500 THR A 399 126.34 -39.08 REMARK 500 TYR A 425 104.04 -163.43 REMARK 500 LEU A 426 1.23 91.70 REMARK 500 TYR A 513 -123.02 52.47 REMARK 500 SER A 527 -68.10 -128.21 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QS3 A 352 558 UNP O95361 TRI16_HUMAN 352 558 SEQADV 7QS3 SER A 350 UNP O95361 EXPRESSION TAG SEQADV 7QS3 MET A 351 UNP O95361 EXPRESSION TAG SEQRES 1 A 209 SER MET GLN ARG LYS TYR TRP THR SER LYS PRO GLU PRO SEQRES 2 A 209 SER THR ARG GLU GLN PHE LEU GLN TYR ALA TYR ASP ILE SEQRES 3 A 209 THR PHE ASP PRO ASP THR ALA HIS LYS TYR LEU ARG LEU SEQRES 4 A 209 GLN GLU GLU ASN ARG LYS VAL THR ASN THR THR PRO TRP SEQRES 5 A 209 GLU HIS PRO TYR PRO ASP LEU PRO SER ARG PHE LEU HIS SEQRES 6 A 209 TRP ARG GLN VAL LEU SER GLN GLN SER LEU TYR LEU HIS SEQRES 7 A 209 ARG TYR TYR PHE GLU VAL GLU ILE PHE GLY ALA GLY THR SEQRES 8 A 209 TYR VAL GLY LEU THR CYS LYS GLY ILE ASP ARG LYS GLY SEQRES 9 A 209 GLU GLU ARG ASN SER CYS ILE SER GLY ASN ASN PHE SER SEQRES 10 A 209 TRP SER LEU GLN TRP ASN GLY LYS GLU PHE THR ALA TRP SEQRES 11 A 209 TYR SER ASP MET GLU THR PRO LEU LYS ALA GLY PRO PHE SEQRES 12 A 209 ARG ARG LEU GLY VAL TYR ILE ASP PHE PRO GLY GLY ILE SEQRES 13 A 209 LEU SER PHE TYR GLY VAL GLU TYR ASP THR MET THR LEU SEQRES 14 A 209 VAL HIS LYS PHE ALA CYS LYS PHE SER GLU PRO VAL TYR SEQRES 15 A 209 ALA ALA PHE TRP LEU SER LYS LYS GLU ASN ALA ILE ARG SEQRES 16 A 209 ILE VAL ASP LEU GLY GLU GLU PRO GLU LYS PRO ALA PRO SEQRES 17 A 209 SER HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HET EDO A 610 4 HET EDO A 611 4 HET EDO A 612 4 HET EDO A 613 4 HET EDO A 614 4 HET EDO A 615 4 HET CL A 616 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 15(C2 H6 O2) FORMUL 17 CL CL 1- FORMUL 18 HOH *149(H2 O) HELIX 1 AA1 THR A 364 LEU A 369 1 6 HELIX 2 AA2 GLN A 370 ALA A 372 5 3 HELIX 3 AA3 GLU A 455 CYS A 459 5 5 SHEET 1 AA1 7 LEU A 386 GLN A 389 0 SHEET 2 AA1 7 LYS A 394 ASN A 397 -1 O THR A 396 N ARG A 387 SHEET 3 AA1 7 ALA A 542 ILE A 545 -1 O ILE A 543 N VAL A 395 SHEET 4 AA1 7 ARG A 428 PHE A 436 -1 N GLU A 434 O ARG A 544 SHEET 5 AA1 7 ARG A 494 ASP A 500 -1 O VAL A 497 N PHE A 431 SHEET 6 AA1 7 ILE A 505 GLU A 512 -1 O VAL A 511 N ARG A 494 SHEET 7 AA1 7 THR A 515 ALA A 523 -1 O VAL A 519 N PHE A 508 SHEET 1 AA2 6 GLN A 417 LEU A 424 0 SHEET 2 AA2 6 VAL A 530 LEU A 536 -1 O VAL A 530 N LEU A 424 SHEET 3 AA2 6 THR A 440 CYS A 446 -1 N THR A 445 O TYR A 531 SHEET 4 AA2 6 TRP A 467 TRP A 471 -1 O LEU A 469 N VAL A 442 SHEET 5 AA2 6 PHE A 476 TYR A 480 -1 O TRP A 479 N SER A 468 SHEET 6 AA2 6 MET A 483 PRO A 486 -1 O THR A 485 N ALA A 478 CISPEP 1 THR A 399 PRO A 400 0 10.46 CISPEP 2 GLY A 490 PRO A 491 0 3.82 CRYST1 55.730 55.730 159.602 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006266 0.00000