HEADER ANTIBIOTIC 12-JAN-22 7QS6 TITLE SOLUTION STRUCTURE OF THANATIN-LIKE DERIVATIVE 7 IN COMPLEX WITH TITLE 2 E.COLI LPTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPOLYSACCHARIDE EXPORT SYSTEM PROTEIN LPTA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE SEQUENCE DOESNT CONTAIN THE SIGNALING SEQUENCE COMPND 6 (RESIDUES 1-27 FROM UNIPROT ENTRY P0ADV1). THE FIRST RESIDUE IS COMPND 7 NUMBERED 28. THE EXPRESSED CONSTRUCT IS 28-159. DEPOSITED ARE COMPND 8 COORDINATES FOR THE STRUCTURED PART CONTAINING RESIDUES 28-145.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: THANATIN-LIKE DERIVATIVE; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: VAN = HYP = HYDROXYPROLINE PEN =PENICILLAMINE DAB = COMPND 14 DIAMINOBUTYRIC ACID DDA = D-DAB SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: LPTA, YHBN, B3200, JW3167; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: PODISUS MACULIVENTRIS; SOURCE 12 ORGANISM_COMMON: SPINED SOLDIER BUG; SOURCE 13 ORGANISM_TAXID: 29025 KEYWDS STRUCTURE FROM CYANA 3.98.11, ANTIBIOTIC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.MOEHLE,O.ZERBE REVDAT 4 15-NOV-23 7QS6 1 LINK ATOM REVDAT 3 14-JUN-23 7QS6 1 SOURCE DBREF SEQADV REVDAT 2 07-JUN-23 7QS6 1 JRNL REVDAT 1 10-MAY-23 7QS6 0 JRNL AUTH M.SCHUSTER,E.BRABET,K.K.OI,N.DESJONQUERES,K.MOEHLE, JRNL AUTH 2 K.LE POUPON,S.HELL,S.GABLE,V.RITHIE,S.DILLINGER,P.ZBINDEN, JRNL AUTH 3 A.LUTHER,C.LI,S.STIEGELER,C.D'ARCO,H.LOCHER,T.REMUS, JRNL AUTH 4 S.DIMAIO,P.MOTTA,A.WACH,F.JUNG,G.UPERT,D.OBRECHT, JRNL AUTH 5 M.BENGHEZAL,O.ZERBE JRNL TITL PEPTIDOMIMETIC ANTIBIOTICS DISRUPT THE LIPOPOLYSACCHARIDE JRNL TITL 2 TRANSPORT BRIDGE OF DRUG-RESISTANT ENTEROBACTERIACEAE. JRNL REF SCI ADV V. 9 G3683 2023 JRNL REFN ESSN 2375-2548 JRNL PMID 37224246 JRNL DOI 10.1126/SCIADV.ADG3683 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : MOE 2019.01 REMARK 3 AUTHORS : CHEMICAL COMPUTING GROUP ULC, 1010 SHERBOOKE ST. REMARK 3 WEST, SUITE #910, MONTREAL, QC, CANADA, H3A 2R7, REMARK 3 2022. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QS6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292119717. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 300 UM [U-13C; U-15N] REMARK 210 LIPOPOLYSACCHARIDE EXPORT SYSTEM REMARK 210 PROTEIN LPTA, 20 MM REMARK 210 SODIUMPHOSPHATE, 150 MM NACL, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCO; 3D HN(COCA)CB; REMARK 210 3D HNCACB; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.98, CCPNMR ANALYSIS, REMARK 210 CARA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 3 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 4 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 4 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 5 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 5 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 6 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 6 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 7 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 7 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 8 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 8 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 8 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 9 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 10 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 10 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 11 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 12 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 12 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 14 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 14 TYR A 128 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 15 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 17 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 19 ARG B 213 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 20 ARG B 220 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 101 29.02 -73.57 REMARK 500 1 ALA A 117 -39.12 -161.36 REMARK 500 1 LYS A 118 4.78 -178.40 REMARK 500 1 THR B 215 -46.65 -132.65 REMARK 500 2 GLN A 81 64.80 -69.90 REMARK 500 2 ASN A 101 41.62 -79.71 REMARK 500 2 ALA A 117 -54.07 -139.20 REMARK 500 2 LYS A 118 7.24 -167.81 REMARK 500 2 ASN A 126 53.24 30.99 REMARK 500 3 ASP A 41 -42.29 -133.80 REMARK 500 3 LEU A 45 32.97 -142.96 REMARK 500 3 THR A 55 -159.52 -147.29 REMARK 500 3 GLN A 81 89.80 -57.70 REMARK 500 3 GLU A 84 34.50 -77.31 REMARK 500 3 ASN A 101 26.06 -73.13 REMARK 500 3 ALA A 109 -159.18 -158.99 REMARK 500 3 ALA A 117 -66.27 -155.53 REMARK 500 3 LYS A 118 54.77 -159.37 REMARK 500 3 ASP A 119 -92.42 -95.10 REMARK 500 3 THR B 215 -67.97 -130.90 REMARK 500 3 CYS B 218 -143.39 43.45 REMARK 500 4 GLN A 99 38.86 -75.93 REMARK 500 4 LYS A 118 -7.60 177.19 REMARK 500 4 ASN A 126 50.76 -104.82 REMARK 500 4 LYS A 140 68.45 -150.16 REMARK 500 4 THR B 215 -50.54 -134.21 REMARK 500 5 LYS A 91 109.86 62.58 REMARK 500 5 LYS A 103 57.63 -115.69 REMARK 500 5 ALA A 117 -40.04 -168.60 REMARK 500 5 LYS A 118 -8.02 -162.86 REMARK 500 5 THR A 142 43.34 -92.93 REMARK 500 5 THR B 215 -61.21 -138.18 REMARK 500 6 LEU A 45 72.29 -107.44 REMARK 500 6 LYS A 91 82.28 -172.50 REMARK 500 6 ASN A 101 28.29 -79.28 REMARK 500 6 LYS A 103 77.87 -113.36 REMARK 500 6 LEU A 116 6.61 -65.95 REMARK 500 6 ALA A 117 -50.95 -142.32 REMARK 500 6 LYS A 118 3.09 -171.74 REMARK 500 7 LEU A 45 78.73 -110.80 REMARK 500 7 ALA A 69 -143.13 -140.77 REMARK 500 7 PRO A 77 45.17 -86.43 REMARK 500 7 ASN A 101 43.04 -77.78 REMARK 500 7 ALA A 109 -150.53 -148.97 REMARK 500 7 SER A 110 -30.75 -135.84 REMARK 500 7 LEU A 116 -16.15 56.23 REMARK 500 7 ALA A 117 -62.19 -163.04 REMARK 500 7 LYS A 118 19.65 -146.82 REMARK 500 7 ASN A 126 123.32 70.47 REMARK 500 7 SER A 134 -77.25 169.78 REMARK 500 REMARK 500 THIS ENTRY HAS 194 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 79 GLU A 80 1 144.22 REMARK 500 LYS A 118 ASP A 119 1 -146.44 REMARK 500 DAB B 219 ARG B 220 1 144.39 REMARK 500 LYS A 103 PRO A 104 2 147.76 REMARK 500 LYS A 118 ASP A 119 2 -134.66 REMARK 500 DAB B 219 ARG B 220 2 136.55 REMARK 500 VAL A 28 THR A 29 3 -137.74 REMARK 500 ARG B 220 TYR B 221 3 -143.89 REMARK 500 GLN A 34 PRO A 35 4 145.58 REMARK 500 GLY A 79 GLU A 80 4 143.31 REMARK 500 LYS A 83 GLU A 84 4 145.61 REMARK 500 GLU A 115 LEU A 116 4 -123.46 REMARK 500 LYS A 118 ASP A 119 4 -124.65 REMARK 500 EU0 B 206 HYP B 207 4 141.93 REMARK 500 ARG B 220 TYR B 221 4 145.42 REMARK 500 GLU A 115 LEU A 116 5 -143.11 REMARK 500 DAB B 219 ARG B 220 5 138.02 REMARK 500 VAL A 28 THR A 29 6 -136.27 REMARK 500 GLY A 56 ASN A 57 6 -146.53 REMARK 500 LYS A 91 PRO A 92 6 62.14 REMARK 500 LYS A 118 ASP A 119 6 -130.26 REMARK 500 PRO A 77 GLY A 78 7 -141.22 REMARK 500 SER A 110 GLN A 111 7 141.29 REMARK 500 GLU A 115 LEU A 116 7 148.15 REMARK 500 VAL A 132 ASP A 133 7 146.02 REMARK 500 ARG B 220 TYR B 221 8 143.13 REMARK 500 LYS A 103 PRO A 104 9 149.65 REMARK 500 LYS A 118 ASP A 119 9 -146.86 REMARK 500 TYR A 143 LEU A 144 9 149.56 REMARK 500 DAB B 219 ARG B 220 9 126.26 REMARK 500 ALA A 69 ASP A 70 10 145.38 REMARK 500 LEU A 116 ALA A 117 10 148.35 REMARK 500 LYS A 118 ASP A 119 10 -145.93 REMARK 500 ASP A 119 PHE A 120 10 147.78 REMARK 500 ASP A 139 LYS A 140 10 149.95 REMARK 500 DAB B 219 ARG B 220 10 144.11 REMARK 500 ARG B 220 TYR B 221 10 148.94 REMARK 500 VAL A 28 THR A 29 11 -136.31 REMARK 500 ALA A 69 ASP A 70 11 149.63 REMARK 500 GLN A 99 ASP A 100 11 148.63 REMARK 500 LYS A 118 ASP A 119 11 -130.77 REMARK 500 THR A 61 GLN A 62 12 149.29 REMARK 500 LYS A 103 PRO A 104 12 148.30 REMARK 500 DAB B 219 ARG B 220 12 141.41 REMARK 500 ALA A 69 ASP A 70 13 149.00 REMARK 500 LYS A 71 VAL A 72 13 147.81 REMARK 500 LYS A 118 ASP A 119 13 -136.95 REMARK 500 DAB B 219 ARG B 220 13 147.36 REMARK 500 DAB B 219 ARG B 220 14 -116.23 REMARK 500 ARG B 220 TYR B 221 14 -126.95 REMARK 500 REMARK 500 THIS ENTRY HAS 68 NON CIS, NON-TRANS OMEGA OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 76 0.10 SIDE CHAIN REMARK 500 2 TYR A 96 0.12 SIDE CHAIN REMARK 500 2 TYR B 210 0.07 SIDE CHAIN REMARK 500 3 ARG B 220 0.13 SIDE CHAIN REMARK 500 4 TYR B 210 0.07 SIDE CHAIN REMARK 500 5 TYR A 89 0.07 SIDE CHAIN REMARK 500 7 ARG A 76 0.08 SIDE CHAIN REMARK 500 7 TYR B 210 0.08 SIDE CHAIN REMARK 500 7 ARG B 213 0.10 SIDE CHAIN REMARK 500 7 ARG B 220 0.10 SIDE CHAIN REMARK 500 10 TYR B 210 0.07 SIDE CHAIN REMARK 500 12 ARG A 76 0.09 SIDE CHAIN REMARK 500 14 ARG A 76 0.13 SIDE CHAIN REMARK 500 14 TYR A 128 0.08 SIDE CHAIN REMARK 500 16 TYR A 96 0.09 SIDE CHAIN REMARK 500 16 TYR B 210 0.07 SIDE CHAIN REMARK 500 17 ARG B 213 0.15 SIDE CHAIN REMARK 500 20 ARG A 76 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 6 VAL A 28 10.57 REMARK 500 11 VAL A 28 10.09 REMARK 500 17 VAL A 28 10.63 REMARK 500 20 VAL A 28 10.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34699 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THANATIN-LIKE DERIVATIVE 5 IN COMPLEX WITH REMARK 900 E.COLI LPTA DBREF 7QS6 A 28 145 UNP P0ADV1 LPTA_ECOLI 28 145 DBREF 7QS6 B 206 221 UNP P55788 THAN_PODMA 6 21 SEQADV 7QS6 THR B 209 UNP P55788 ILE 9 ENGINEERED MUTATION SEQADV 7QS6 LE1 B 211 UNP P55788 CYS 11 MODIFIED RESIDUE SEQADV 7QS6 DAB B 214 UNP P55788 ARG 14 MODIFIED RESIDUE SEQADV 7QS6 4FO B 216 UNP P55788 GLY 16 MODIFIED RESIDUE SEQADV 7QS6 DAB B 219 UNP P55788 GLN 19 MODIFIED RESIDUE SEQADV 7QS6 TYR B 221 UNP P55788 MET 21 ENGINEERED MUTATION SEQRES 1 A 118 VAL THR GLY ASP THR ASP GLN PRO ILE HIS ILE GLU SER SEQRES 2 A 118 ASP GLN GLN SER LEU ASP MET GLN GLY ASN VAL VAL THR SEQRES 3 A 118 PHE THR GLY ASN VAL ILE VAL THR GLN GLY THR ILE LYS SEQRES 4 A 118 ILE ASN ALA ASP LYS VAL VAL VAL THR ARG PRO GLY GLY SEQRES 5 A 118 GLU GLN GLY LYS GLU VAL ILE ASP GLY TYR GLY LYS PRO SEQRES 6 A 118 ALA THR PHE TYR GLN MET GLN ASP ASN GLY LYS PRO VAL SEQRES 7 A 118 GLU GLY HIS ALA SER GLN MET HIS TYR GLU LEU ALA LYS SEQRES 8 A 118 ASP PHE VAL VAL LEU THR GLY ASN ALA TYR LEU GLN GLN SEQRES 9 A 118 VAL ASP SER ASN ILE LYS GLY ASP LYS ILE THR TYR LEU SEQRES 10 A 118 VAL SEQRES 1 B 16 EU0 HYP ILE THR TYR LE1 ASN ARG DAB THR 4FO LYS CYS SEQRES 2 B 16 DAB ARG TYR MODRES 7QS6 EU0 B 206 VAL MODIFIED RESIDUE MODRES 7QS6 HYP B 207 PRO MODIFIED RESIDUE HET EU0 B 206 23 HET HYP B 207 15 HET LE1 B 211 16 HET DAB B 214 16 HET 4FO B 216 16 HET DAB B 219 16 HETNAM EU0 1-[(2~{S})-3-METHYL-1-OXIDANYLIDENE-BUTAN-2- HETNAM 2 EU0 YL]GUANIDINE HETNAM HYP 4-HYDROXYPROLINE HETNAM LE1 3-SULFANYL-L-VALINE HETNAM DAB 2,4-DIAMINOBUTYRIC ACID HETNAM 4FO (2R)-2,4-DIAMINOBUTANOIC ACID HETSYN HYP HYDROXYPROLINE HETSYN LE1 L-LE1ICILLAMINE; L-PENICILLAMINE FORMUL 2 EU0 C6 H14 N3 O2 1+ FORMUL 2 HYP C5 H9 N O3 FORMUL 2 LE1 C5 H11 N O2 S FORMUL 2 DAB 2(C4 H10 N2 O2) FORMUL 2 4FO C4 H10 N2 O2 SHEET 1 AA1 9 SER A 134 LYS A 137 0 SHEET 2 AA1 9 TYR A 128 GLN A 131 -1 N LEU A 129 O ILE A 136 SHEET 3 AA1 9 LYS A 103 HIS A 108 -1 N HIS A 108 O TYR A 128 SHEET 4 AA1 9 THR A 94 GLN A 99 -1 N PHE A 95 O GLY A 107 SHEET 5 AA1 9 ILE A 65 ASN A 68 -1 N LYS A 66 O TYR A 96 SHEET 6 AA1 9 ILE A 59 GLN A 62 -1 N VAL A 60 O ILE A 67 SHEET 7 AA1 9 ILE A 36 SER A 40 -1 N HIS A 37 O THR A 61 SHEET 8 AA1 9 ILE B 208 ASN B 212 1 O LE1 B 211 N ILE A 38 SHEET 9 AA1 9 CYS B 218 ARG B 220 -1 O DAB B 219 N TYR B 210 SHEET 1 AA2 7 GLN A 42 ASP A 46 0 SHEET 2 AA2 7 VAL A 51 THR A 55 -1 O THR A 53 N SER A 44 SHEET 3 AA2 7 LYS A 71 VAL A 73 -1 O VAL A 72 N PHE A 54 SHEET 4 AA2 7 ILE A 86 TYR A 89 -1 O TYR A 89 N LYS A 71 SHEET 5 AA2 7 GLN A 111 TYR A 114 -1 O MET A 112 N GLY A 88 SHEET 6 AA2 7 VAL A 122 THR A 124 -1 O THR A 124 N GLN A 111 SHEET 7 AA2 7 LYS A 140 THR A 142 -1 O ILE A 141 N LEU A 123 SSBOND 1 LE1 B 211 CYS B 218 1555 1555 2.10 LINK C EU0 B 206 N HYP B 207 1555 1555 1.35 LINK C HYP B 207 N ILE B 208 1555 1555 1.34 LINK C TYR B 210 N LE1 B 211 1555 1555 1.33 LINK C LE1 B 211 N ASN B 212 1555 1555 1.34 LINK C ARG B 213 N DAB B 214 1555 1555 1.33 LINK C DAB B 214 N THR B 215 1555 1555 1.34 LINK C THR B 215 N 4FO B 216 1555 1555 1.33 LINK C 4FO B 216 N LYS B 217 1555 1555 1.35 LINK C CYS B 218 N DAB B 219 1555 1555 1.33 LINK C DAB B 219 N ARG B 220 1555 1555 1.34 CISPEP 1 LYS A 91 PRO A 92 1 19.02 CISPEP 2 LYS A 91 PRO A 92 2 2.42 CISPEP 3 LYS A 91 PRO A 92 3 -0.77 CISPEP 4 LYS A 91 PRO A 92 4 -23.09 CISPEP 5 LYS A 91 PRO A 92 5 4.75 CISPEP 6 LYS A 91 PRO A 92 7 23.57 CISPEP 7 LYS A 91 PRO A 92 8 2.40 CISPEP 8 LYS A 91 PRO A 92 9 22.92 CISPEP 9 LYS A 91 PRO A 92 10 -2.63 CISPEP 10 LYS A 91 PRO A 92 11 -8.59 CISPEP 11 LYS A 91 PRO A 92 12 18.06 CISPEP 12 LYS A 91 PRO A 92 13 -10.59 CISPEP 13 LYS A 91 PRO A 92 14 -18.80 CISPEP 14 LYS A 91 PRO A 92 15 -11.58 CISPEP 15 LYS A 91 PRO A 92 16 12.67 CISPEP 16 LYS A 91 PRO A 92 18 8.17 CISPEP 17 LYS A 91 PRO A 92 19 -18.64 CISPEP 18 LYS A 91 PRO A 92 20 23.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1