HEADER BIOSYNTHETIC PROTEIN 19-JAN-22 7QV0 TITLE COVALENT COMPLEX BETWEEN SCALINDUA BRODAE AMXFABZ AND AMXACP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HYDROXYACYL-(ACYL-CARRIER-PROTEIN) DEHYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ACYL CARRIER PROTEIN; COMPND 7 CHAIN: D, E, F; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS SCALINDUA BRODAE; SOURCE 3 ORGANISM_TAXID: 237368; SOURCE 4 GENE: SCABRO_02230; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: CANDIDATUS SCALINDUA BRODAE; SOURCE 9 ORGANISM_TAXID: 237368; SOURCE 10 GENE: SCABRO_02231; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIPID BIOSYNTHESIS, LADDERANE, ACYL CARRIER PROTEIN, DEHYDRATASE, KEYWDS 2 FABZ, ACP, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.BARENDS,A.DIETL REVDAT 4 07-FEB-24 7QV0 1 REMARK REVDAT 3 26-APR-23 7QV0 1 COMPND JRNL REMARK HET REVDAT 3 2 1 HETNAM FORMUL LINK ATOM REVDAT 2 29-MAR-23 7QV0 1 JRNL REVDAT 1 01-FEB-23 7QV0 0 JRNL AUTH A.DIETL,K.WELLACH,P.MAHADEVAN,N.MERTES,S.L.WINTER,T.KUTSCH, JRNL AUTH 2 C.WALZ,I.SCHLICHTING,S.FABRITZ,T.R.M.BARENDS JRNL TITL STRUCTURES OF AN UNUSUAL 3-HYDROXYACYL DEHYDRATASE (FABZ) JRNL TITL 2 FROM A LADDERANE-PRODUCING ORGANISM WITH AN UNEXPECTED JRNL TITL 3 SUBSTRATE PREFERENCE. JRNL REF J.BIOL.CHEM. V. 299 04602 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36907440 JRNL DOI 10.1016/J.JBC.2023.104602 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 60.4 REMARK 3 NUMBER OF REFLECTIONS : 17797 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4000 - 4.5200 1.00 4826 281 0.2343 0.2628 REMARK 3 2 4.5200 - 3.5900 1.00 4702 224 0.2165 0.2558 REMARK 3 3 3.5900 - 3.1400 0.94 4381 231 0.2753 0.2937 REMARK 3 4 3.1400 - 2.8500 0.41 1895 103 0.3158 0.3612 REMARK 3 5 2.8500 - 2.6500 0.17 795 47 0.3597 0.3764 REMARK 3 6 2.6500 - 2.4900 0.06 294 18 0.5079 0.5683 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.187 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.063 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 134.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5335 REMARK 3 ANGLE : 0.881 7183 REMARK 3 CHIRALITY : 0.053 864 REMARK 3 PLANARITY : 0.005 903 REMARK 3 DIHEDRAL : 26.391 2009 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 1.4133 8.6833 20.3658 REMARK 3 T TENSOR REMARK 3 T11: -0.0276 T22: 0.3906 REMARK 3 T33: 0.1590 T12: 0.0347 REMARK 3 T13: -0.0666 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 6.2962 L22: 3.0570 REMARK 3 L33: 6.6123 L12: -1.3451 REMARK 3 L13: -1.5163 L23: -1.6382 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: -0.3517 S13: 0.1342 REMARK 3 S21: 0.0122 S22: -0.1573 S23: -0.1754 REMARK 3 S31: -0.5579 S32: 0.1700 S33: -0.0040 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 39.3667 9.5289 15.8483 REMARK 3 T TENSOR REMARK 3 T11: 0.0524 T22: 1.2796 REMARK 3 T33: 0.5740 T12: -0.1774 REMARK 3 T13: 0.0547 T23: 0.2120 REMARK 3 L TENSOR REMARK 3 L11: 5.3236 L22: 2.6023 REMARK 3 L33: 5.7424 L12: -0.0378 REMARK 3 L13: 1.8761 L23: -1.8295 REMARK 3 S TENSOR REMARK 3 S11: -0.1273 S12: -0.3924 S13: 0.2820 REMARK 3 S21: 0.2833 S22: 0.0383 S23: -0.4459 REMARK 3 S31: -0.6415 S32: 0.8662 S33: -0.0103 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 23.9757 1.6879 3.7349 REMARK 3 T TENSOR REMARK 3 T11: 0.0063 T22: 0.6424 REMARK 3 T33: 0.3068 T12: 0.1316 REMARK 3 T13: 0.1235 T23: 0.2327 REMARK 3 L TENSOR REMARK 3 L11: 5.8448 L22: 3.9334 REMARK 3 L33: 5.7546 L12: 0.0948 REMARK 3 L13: -0.0289 L23: 1.1168 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: -0.1307 S13: -0.0315 REMARK 3 S21: -0.0325 S22: -0.3351 S23: -0.3167 REMARK 3 S31: 0.1161 S32: 0.5105 S33: -0.0276 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 37.4625 25.8032 -11.9395 REMARK 3 T TENSOR REMARK 3 T11: 2.0940 T22: 1.6281 REMARK 3 T33: 1.4572 T12: -0.3160 REMARK 3 T13: 0.1710 T23: 0.4785 REMARK 3 L TENSOR REMARK 3 L11: 0.5241 L22: 0.6274 REMARK 3 L33: 0.6709 L12: -0.5743 REMARK 3 L13: -0.0803 L23: 0.0404 REMARK 3 S TENSOR REMARK 3 S11: -0.8245 S12: 0.8409 S13: 0.5112 REMARK 3 S21: -1.2535 S22: 0.6914 S23: -0.1551 REMARK 3 S31: 0.3922 S32: 0.9980 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): 49.5363 1.1726 -14.0518 REMARK 3 T TENSOR REMARK 3 T11: 1.8472 T22: 2.7838 REMARK 3 T33: 2.2599 T12: 0.1969 REMARK 3 T13: 0.7106 T23: -0.3776 REMARK 3 L TENSOR REMARK 3 L11: 0.1777 L22: 0.2665 REMARK 3 L33: 0.0968 L12: 0.2188 REMARK 3 L13: -0.1234 L23: -0.1487 REMARK 3 S TENSOR REMARK 3 S11: 0.4215 S12: 1.7688 S13: 0.1042 REMARK 3 S21: -0.7503 S22: 0.8702 S23: -1.1282 REMARK 3 S31: -1.2220 S32: 0.1216 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F REMARK 3 ORIGIN FOR THE GROUP (A): -25.2754 -8.9383 14.9833 REMARK 3 T TENSOR REMARK 3 T11: 1.0494 T22: 1.9986 REMARK 3 T33: 2.2507 T12: -0.3416 REMARK 3 T13: -0.2530 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.4613 L22: 0.3251 REMARK 3 L33: 0.4593 L12: -0.2487 REMARK 3 L13: 0.4320 L23: -0.1149 REMARK 3 S TENSOR REMARK 3 S11: 0.1423 S12: -0.0478 S13: 0.3601 REMARK 3 S21: -0.6073 S22: 0.7157 S23: 2.0878 REMARK 3 S31: 0.3964 S32: -0.8679 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 4 THROUGH 76 OR REMARK 3 RESID 84 THROUGH 141 OR RESID 202 THROUGH REMARK 3 301)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 4 THROUGH 76 OR REMARK 3 RESID 84 THROUGH 141 OR RESID 202 THROUGH REMARK 3 301)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 4 THROUGH 76 OR REMARK 3 RESID 84 THROUGH 141 OR RESID 202 THROUGH REMARK 3 301)) REMARK 3 SELECTION : (CHAIN 'C' AND (RESID 4 THROUGH 76 OR REMARK 3 RESID 84 THROUGH 141 OR RESID 202 THROUGH REMARK 3 301)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'E' REMARK 3 SELECTION : CHAIN 'D' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'E' REMARK 3 SELECTION : CHAIN 'F' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QV0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120378. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99988 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 45.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.94200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Y52 REMARK 200 REMARK 200 REMARK: NEEDLE-LIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (W/V) PEG 3350, 0.2 M AMMONIUM REMARK 280 ACETATE, 0.1 M SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.47867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.73933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.73933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 105.47867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.73933 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 77 REMARK 465 THR A 78 REMARK 465 GLU A 79 REMARK 465 GLN A 80 REMARK 465 HIS A 81 REMARK 465 GLU B 79 REMARK 465 GLN B 80 REMARK 465 HIS B 81 REMARK 465 LYS B 82 REMARK 465 ASP B 83 REMARK 465 ALA B 142 REMARK 465 ASN B 143 REMARK 465 LYS B 144 REMARK 465 ASP B 145 REMARK 465 VAL C 2 REMARK 465 ASN C 3 REMARK 465 THR C 78 REMARK 465 GLU C 79 REMARK 465 GLN C 80 REMARK 465 HIS C 81 REMARK 465 LYS C 82 REMARK 465 ASP C 83 REMARK 465 LYS C 144 REMARK 465 ASP C 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS C 48 C2 GC5 C 301 1.36 REMARK 500 NE2 HIS A 48 C2 GC5 A 301 1.42 REMARK 500 NE2 HIS B 48 C2 GC5 B 301 1.43 REMARK 500 OG SER E 41 P24 GC5 B 301 1.60 REMARK 500 OG SER F 41 P24 GC5 A 301 1.61 REMARK 500 OG SER D 41 P24 GC5 C 301 1.64 REMARK 500 O SER E 69 N THR E 73 2.14 REMARK 500 O THR E 80 N LYS E 84 2.15 REMARK 500 OG SER A 90 OG SER A 138 2.17 REMARK 500 O THR D 73 OG1 THR D 77 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 16 41.91 -99.89 REMARK 500 ASN A 41 53.37 -93.10 REMARK 500 PHE A 49 75.18 53.30 REMARK 500 ALA A 142 20.51 -143.30 REMARK 500 ASN B 41 50.71 -92.10 REMARK 500 PHE B 49 76.50 52.50 REMARK 500 SER B 75 -36.03 -130.36 REMARK 500 SER B 96 -60.98 -90.90 REMARK 500 ASP B 129 49.08 -95.58 REMARK 500 PRO C 12 41.87 -82.26 REMARK 500 LYS C 14 -166.63 -120.50 REMARK 500 LYS E 63 -34.41 -36.96 REMARK 500 ASP F 40 -169.48 -123.14 REMARK 500 PRO F 60 107.86 -53.95 REMARK 500 LYS F 63 -5.17 -54.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GC5 A 301 REMARK 610 GC5 B 301 REMARK 610 GC5 C 301 DBREF1 7QV0 A 3 145 UNP A0A0B0EHL2_9BACT DBREF2 7QV0 A A0A0B0EHL2 3 145 DBREF1 7QV0 B 3 145 UNP A0A0B0EHL2_9BACT DBREF2 7QV0 B A0A0B0EHL2 3 145 DBREF1 7QV0 C 3 145 UNP A0A0B0EHL2_9BACT DBREF2 7QV0 C A0A0B0EHL2 3 145 DBREF1 7QV0 D 2 84 UNP A0A0B0EN18_9BACT DBREF2 7QV0 D A0A0B0EN18 2 84 DBREF1 7QV0 E 2 84 UNP A0A0B0EN18_9BACT DBREF2 7QV0 E A0A0B0EN18 2 84 DBREF1 7QV0 F 2 84 UNP A0A0B0EN18_9BACT DBREF2 7QV0 F A0A0B0EN18 2 84 SEQADV 7QV0 VAL A 2 UNP A0A0B0EHL EXPRESSION TAG SEQADV 7QV0 VAL B 2 UNP A0A0B0EHL EXPRESSION TAG SEQADV 7QV0 VAL C 2 UNP A0A0B0EHL EXPRESSION TAG SEQRES 1 A 144 VAL ASN PHE GLU GLU VAL ARG GLU LEU VAL PRO GLN LYS SEQRES 2 A 144 TYR PRO PHE LEU PHE ILE ASP LYS VAL ILE GLU LEU GLN SEQRES 3 A 144 LYS GLU SER ARG ILE VAL CYS LEU LYS ASN ILE SER GLY SEQRES 4 A 144 ASN GLU PRO PHE PHE ALA GLY HIS PHE PRO ASP PHE ALA SEQRES 5 A 144 ILE MET PRO GLY VAL LEU ILE VAL GLU ALA LEU ALA GLN SEQRES 6 A 144 ALA SER ILE ILE LEU PHE LYS LYS SER PHE SER THR GLU SEQRES 7 A 144 GLN HIS LYS ASP LYS VAL PHE LEU LEU ALA SER ALA ASN SEQRES 8 A 144 VAL ARG PHE SER LYS PRO VAL PHE PRO GLY ASP GLN LEU SEQRES 9 A 144 ILE LEU GLU ILE ASP ILE GLU LYS VAL ILE SER SER ALA SEQRES 10 A 144 ALA ILE VAL LYS GLY VAL ALA LYS VAL GLY ASP LYS VAL SEQRES 11 A 144 VAL THR LYS ALA THR LEU SER PHE GLY VAL ALA ASN LYS SEQRES 12 A 144 ASP SEQRES 1 B 144 VAL ASN PHE GLU GLU VAL ARG GLU LEU VAL PRO GLN LYS SEQRES 2 B 144 TYR PRO PHE LEU PHE ILE ASP LYS VAL ILE GLU LEU GLN SEQRES 3 B 144 LYS GLU SER ARG ILE VAL CYS LEU LYS ASN ILE SER GLY SEQRES 4 B 144 ASN GLU PRO PHE PHE ALA GLY HIS PHE PRO ASP PHE ALA SEQRES 5 B 144 ILE MET PRO GLY VAL LEU ILE VAL GLU ALA LEU ALA GLN SEQRES 6 B 144 ALA SER ILE ILE LEU PHE LYS LYS SER PHE SER THR GLU SEQRES 7 B 144 GLN HIS LYS ASP LYS VAL PHE LEU LEU ALA SER ALA ASN SEQRES 8 B 144 VAL ARG PHE SER LYS PRO VAL PHE PRO GLY ASP GLN LEU SEQRES 9 B 144 ILE LEU GLU ILE ASP ILE GLU LYS VAL ILE SER SER ALA SEQRES 10 B 144 ALA ILE VAL LYS GLY VAL ALA LYS VAL GLY ASP LYS VAL SEQRES 11 B 144 VAL THR LYS ALA THR LEU SER PHE GLY VAL ALA ASN LYS SEQRES 12 B 144 ASP SEQRES 1 C 144 VAL ASN PHE GLU GLU VAL ARG GLU LEU VAL PRO GLN LYS SEQRES 2 C 144 TYR PRO PHE LEU PHE ILE ASP LYS VAL ILE GLU LEU GLN SEQRES 3 C 144 LYS GLU SER ARG ILE VAL CYS LEU LYS ASN ILE SER GLY SEQRES 4 C 144 ASN GLU PRO PHE PHE ALA GLY HIS PHE PRO ASP PHE ALA SEQRES 5 C 144 ILE MET PRO GLY VAL LEU ILE VAL GLU ALA LEU ALA GLN SEQRES 6 C 144 ALA SER ILE ILE LEU PHE LYS LYS SER PHE SER THR GLU SEQRES 7 C 144 GLN HIS LYS ASP LYS VAL PHE LEU LEU ALA SER ALA ASN SEQRES 8 C 144 VAL ARG PHE SER LYS PRO VAL PHE PRO GLY ASP GLN LEU SEQRES 9 C 144 ILE LEU GLU ILE ASP ILE GLU LYS VAL ILE SER SER ALA SEQRES 10 C 144 ALA ILE VAL LYS GLY VAL ALA LYS VAL GLY ASP LYS VAL SEQRES 11 C 144 VAL THR LYS ALA THR LEU SER PHE GLY VAL ALA ASN LYS SEQRES 12 C 144 ASP SEQRES 1 D 83 PRO VAL GLU ASN LEU GLU LYS GLU ILE THR ALA ILE VAL SEQRES 2 D 83 ALA GLU VAL THR GLU LEU ASP GLU ASN GLU ILE TRP GLU SEQRES 3 D 83 LYS ARG ASP ALA ASP PHE PHE LYS ASP LEU GLU ILE ASP SEQRES 4 D 83 SER LEU LEU ALA LEU GLU ILE LEU ALA LEU ILE GLU LYS SEQRES 5 D 83 LYS PHE LYS VAL GLN ILE PRO GLU GLU LYS LEU VAL ASP SEQRES 6 D 83 ILE THR SER LEU ASN ALA THR ILE GLU MET THR ARG SER SEQRES 7 D 83 THR LEU GLU GLY LYS SEQRES 1 E 83 PRO VAL GLU ASN LEU GLU LYS GLU ILE THR ALA ILE VAL SEQRES 2 E 83 ALA GLU VAL THR GLU LEU ASP GLU ASN GLU ILE TRP GLU SEQRES 3 E 83 LYS ARG ASP ALA ASP PHE PHE LYS ASP LEU GLU ILE ASP SEQRES 4 E 83 SER LEU LEU ALA LEU GLU ILE LEU ALA LEU ILE GLU LYS SEQRES 5 E 83 LYS PHE LYS VAL GLN ILE PRO GLU GLU LYS LEU VAL ASP SEQRES 6 E 83 ILE THR SER LEU ASN ALA THR ILE GLU MET THR ARG SER SEQRES 7 E 83 THR LEU GLU GLY LYS SEQRES 1 F 83 PRO VAL GLU ASN LEU GLU LYS GLU ILE THR ALA ILE VAL SEQRES 2 F 83 ALA GLU VAL THR GLU LEU ASP GLU ASN GLU ILE TRP GLU SEQRES 3 F 83 LYS ARG ASP ALA ASP PHE PHE LYS ASP LEU GLU ILE ASP SEQRES 4 F 83 SER LEU LEU ALA LEU GLU ILE LEU ALA LEU ILE GLU LYS SEQRES 5 F 83 LYS PHE LYS VAL GLN ILE PRO GLU GLU LYS LEU VAL ASP SEQRES 6 F 83 ILE THR SER LEU ASN ALA THR ILE GLU MET THR ARG SER SEQRES 7 F 83 THR LEU GLU GLY LYS HET GC5 A 301 28 HET GC5 B 301 28 HET GC5 C 301 28 HETNAM GC5 S-[2-[3-[[(2R)-3,3-DIMETHYL-2-OXIDANYL-4-PHOSPHONOOXY- HETNAM 2 GC5 BUTANOYL]AMINO]PROPANOYLAMINO]ETHYL] (Z)-HEX-2- HETNAM 3 GC5 ENETHIOATE FORMUL 7 GC5 3(C17 H31 N2 O8 P S) FORMUL 10 HOH *3(H2 O) HELIX 1 AA1 ASN A 3 VAL A 11 1 9 HELIX 2 AA2 GLU A 42 HIS A 48 1 7 HELIX 3 AA3 PRO A 56 SER A 75 1 20 HELIX 4 AA4 GLU B 5 VAL B 11 1 7 HELIX 5 AA5 LYS B 14 LEU B 18 5 5 HELIX 6 AA6 GLU B 42 HIS B 48 1 7 HELIX 7 AA7 PRO B 56 LYS B 74 1 19 HELIX 8 AA8 GLU C 5 VAL C 11 1 7 HELIX 9 AA9 LYS C 14 LEU C 18 5 5 HELIX 10 AB1 PRO C 43 HIS C 48 1 6 HELIX 11 AB2 PRO C 56 PHE C 76 1 21 HELIX 12 AB3 VAL D 3 THR D 18 1 16 HELIX 13 AB4 ASP D 21 LYS D 28 1 8 HELIX 14 AB5 ARG D 29 ALA D 31 5 3 HELIX 15 AB6 ASP D 40 PHE D 55 1 16 HELIX 16 AB7 PRO D 60 ILE D 67 5 8 HELIX 17 AB8 SER D 69 GLU D 82 1 14 HELIX 18 AB9 VAL E 3 GLU E 19 1 17 HELIX 19 AC1 ASP E 21 LYS E 28 1 8 HELIX 20 AC2 ASP E 32 LEU E 37 1 6 HELIX 21 AC3 ASP E 40 LYS E 56 1 17 HELIX 22 AC4 GLU E 61 ILE E 67 5 7 HELIX 23 AC5 SER E 69 LYS E 84 1 16 HELIX 24 AC6 VAL F 3 THR F 18 1 16 HELIX 25 AC7 ASP F 21 GLU F 27 1 7 HELIX 26 AC8 ASP F 32 LEU F 37 1 6 HELIX 27 AC9 ASP F 40 PHE F 55 1 16 HELIX 28 AD1 PRO F 60 ILE F 67 5 8 HELIX 29 AD2 SER F 69 LYS F 84 1 16 SHEET 1 AA1 6 LYS A 22 GLN A 27 0 SHEET 2 AA1 6 ARG A 31 ASN A 37 -1 O ARG A 31 N GLN A 27 SHEET 3 AA1 6 GLN A 104 VAL A 114 -1 O LEU A 105 N LYS A 36 SHEET 4 AA1 6 ALA A 118 VAL A 127 -1 O ILE A 120 N GLU A 112 SHEET 5 AA1 6 LYS A 130 VAL A 141 -1 O LEU A 137 N VAL A 121 SHEET 6 AA1 6 PHE A 86 PHE A 95 -1 N LEU A 87 O GLY A 140 SHEET 1 AA212 LYS B 22 GLN B 27 0 SHEET 2 AA212 ARG B 31 ASN B 37 -1 O LEU B 35 N LYS B 22 SHEET 3 AA212 GLN B 104 VAL B 114 -1 O LEU B 105 N LYS B 36 SHEET 4 AA212 ALA B 118 VAL B 127 -1 O VAL B 124 N GLU B 108 SHEET 5 AA212 VAL B 131 GLY B 140 -1 O VAL B 132 N ALA B 125 SHEET 6 AA212 LEU B 87 PHE B 95 -1 N LEU B 87 O GLY B 140 SHEET 7 AA212 VAL C 85 PHE C 95 -1 O VAL C 93 N ALA B 91 SHEET 8 AA212 LYS C 130 ALA C 142 -1 O GLY C 140 N LEU C 87 SHEET 9 AA212 ALA C 118 VAL C 127 -1 N ALA C 125 O THR C 133 SHEET 10 AA212 GLN C 104 VAL C 114 -1 N ASP C 110 O LYS C 122 SHEET 11 AA212 ARG C 31 ASN C 37 -1 N ILE C 32 O ILE C 109 SHEET 12 AA212 LYS C 22 GLN C 27 -1 N LYS C 22 O LEU C 35 CISPEP 1 TYR A 15 PRO A 16 0 -1.84 CRYST1 94.789 94.789 158.218 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010550 0.006091 0.000000 0.00000 SCALE2 0.000000 0.012182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006320 0.00000