HEADER DNA BINDING PROTEIN 28-JAN-22 7QYI TITLE SOLUTION STRUCTURE OF THE DNA-BINDING MINOR PILIN FIMT FROM LEGIONELLA TITLE 2 PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PILUS ASSEMBLY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: C3927_06370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TYPE IV PILIN, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.A.G.BRAUS,M.K.HOSPENTHAL,A.D.GOSSERT REVDAT 3 14-JUN-23 7QYI 1 REMARK REVDAT 2 16-MAR-22 7QYI 1 JRNL REVDAT 1 02-MAR-22 7QYI 0 JRNL AUTH S.A.G.BRAUS,F.L.SHORT,S.HOLZ,M.J.M.STEDMAN,A.D.GOSSERT, JRNL AUTH 2 M.K.HOSPENTHAL JRNL TITL THE MOLECULAR BASIS OF FIMT-MEDIATED DNA UPTAKE DURING JRNL TITL 2 BACTERIAL NATURAL TRANSFORMATION. JRNL REF NAT COMMUN V. 13 1065 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35246533 JRNL DOI 10.1038/S41467-022-28690-1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98.2, AMBER 20 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), CASE, REMARK 3 DARDEN, CHEATHAM III, SIMMERLING, WANG, DUKE, LUO, REMARK 3 ... AND KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292116949. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 150 MM NACL REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 580 UM [U-13C; U-15N] FIMT, 25 REMARK 210 MM NAPI, 150 MM SODIUM CHLORIDE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D NOESY COMBINED; 3D HCCH REMARK 210 -TOCSY; 3D HNCACB; 3D CBCA(CO)NH; REMARK 210 2D 1H-13C HSQC; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD; AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA, CCPNMR ANALYSIS 2.51, REMARK 210 TOPSPIN 4.07 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 32 24.50 -78.28 REMARK 500 1 GLU A 67 -78.43 -145.46 REMARK 500 1 TRP A 69 24.61 -72.81 REMARK 500 1 GLN A 80 24.54 -72.54 REMARK 500 1 THR A 82 24.43 -146.06 REMARK 500 1 ASN A 83 55.62 22.38 REMARK 500 1 SER A 107 37.54 -76.75 REMARK 500 1 ASN A 115 35.09 -77.06 REMARK 500 1 ARG A 119 37.90 -150.69 REMARK 500 1 ASN A 123 104.43 -56.04 REMARK 500 1 THR A 133 55.50 -151.26 REMARK 500 1 ASN A 134 82.90 -17.60 REMARK 500 2 GLU A 67 29.60 -73.97 REMARK 500 2 TRP A 69 24.52 -73.49 REMARK 500 2 GLN A 80 24.97 -76.44 REMARK 500 2 THR A 82 24.54 -145.34 REMARK 500 2 ASN A 83 55.73 21.90 REMARK 500 2 SER A 94 25.04 -79.86 REMARK 500 2 ASN A 96 47.70 -86.69 REMARK 500 2 LYS A 103 55.46 -100.20 REMARK 500 2 ASN A 115 34.69 -76.45 REMARK 500 2 THR A 133 25.06 -150.04 REMARK 500 2 ASN A 134 55.80 34.38 REMARK 500 3 GLU A 32 23.64 -75.62 REMARK 500 3 VAL A 37 -44.09 -134.34 REMARK 500 3 GLU A 67 26.14 -73.50 REMARK 500 3 TRP A 69 30.42 -74.52 REMARK 500 3 GLN A 80 24.63 -72.14 REMARK 500 3 THR A 82 24.40 -145.75 REMARK 500 3 ASN A 83 56.01 25.00 REMARK 500 3 ASN A 115 42.42 -75.83 REMARK 500 3 THR A 133 30.36 -146.63 REMARK 500 3 ASN A 134 67.97 28.97 REMARK 500 4 GLU A 32 24.76 -72.73 REMARK 500 4 TRP A 69 24.55 -73.35 REMARK 500 4 ARG A 71 24.73 -141.07 REMARK 500 4 GLN A 80 24.84 -72.12 REMARK 500 4 THR A 82 24.23 -146.96 REMARK 500 4 ASN A 83 55.47 22.89 REMARK 500 4 LYS A 103 55.64 -100.73 REMARK 500 4 SER A 107 30.38 -74.70 REMARK 500 4 ASN A 115 28.81 -77.65 REMARK 500 4 ASN A 123 104.73 -57.81 REMARK 500 4 THR A 133 55.45 -150.92 REMARK 500 4 ASN A 134 85.37 -19.73 REMARK 500 5 GLU A 32 24.36 -76.93 REMARK 500 5 PHE A 63 55.57 -92.84 REMARK 500 5 ASN A 66 24.52 -75.03 REMARK 500 5 GLN A 80 28.40 -78.41 REMARK 500 5 THR A 82 24.29 -146.76 REMARK 500 REMARK 500 THIS ENTRY HAS 259 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34704 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE DNA-BINDING MINOR PILIN FIMT FROM REMARK 900 LEGIONELLA PNEUMOPHILA DBREF1 7QYI A 28 152 UNP A0A2S6F8Q3_LEGPN DBREF2 7QYI A A0A2S6F8Q3 38 162 SEQRES 1 A 125 ILE GLN ASN ASN GLU ARG GLU THR LEU VAL ASN SER ILE SEQRES 2 A 125 LYS THR ALA ILE GLN TYR SER LYS ILE GLN ALA ILE HIS SEQRES 3 A 125 LEU GLY HIS PRO ILE TYR LEU LEU PRO PHE GLY SER ASN SEQRES 4 A 125 GLU ASN TRP SER ARG GLY MET VAL LEU ALA LYS LEU ASN SEQRES 5 A 125 GLN THR THR ASN LYS THR GLU LEU ILE HIS GLN TRP GLN SEQRES 6 A 125 TRP SER SER ASN SER TRP ASN ILE ASN TRP LYS GLY VAL SEQRES 7 A 125 ASP SER ASN HIS ARG ILE ILE ILE SER ASN ILE PRO ASN SEQRES 8 A 125 ARG ALA MET SER ASN GLY LYS PHE ILE LEU ASN ASN LYS SEQRES 9 A 125 ARG THR ASN GLU LYS VAL VAL VAL THR LEU ASN ARG LEU SEQRES 10 A 125 GLY ARG VAL ARG VAL GLY GLY ASN SHEET 1 AA1 4 LYS A 84 TRP A 91 0 SHEET 2 AA1 4 MET A 73 ASN A 79 -1 N LEU A 75 O ILE A 88 SHEET 3 AA1 4 ILE A 58 PRO A 62 -1 N LEU A 61 O VAL A 74 SHEET 4 AA1 4 ILE A 111 ILE A 113 -1 O ILE A 111 N LEU A 60 SHEET 1 AA2 3 ASN A 99 TRP A 102 0 SHEET 2 AA2 3 LYS A 125 ASN A 130 -1 O ILE A 127 N ASN A 101 SHEET 3 AA2 3 GLU A 135 THR A 140 -1 O VAL A 139 N PHE A 126 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1