HEADER MEMBRANE PROTEIN 05-FEB-22 7R2T TITLE SYNJ2BP COMPLEX WITH A PHOSPHORYLATED VANGL2 PEPTIDE AT THE P-1 TITLE 2 POSITION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTOJANIN-2-BINDING PROTEIN,ANNEXIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VANGLE2 PEPTIDE BINDING MOTIF WITH THE P-1 PHOSPHRYLATED; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SYNJ2BP, OMP25, ANXA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS PDZ DOMAIN, PEPTIDE BINDING MOTIF, PHOSPHORYLATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.CARRASCO,A.COUSIDO SIAH,G.GOGL,S.BETZI,A.MCEWEN,C.KOSTMANN,G.TRAVE REVDAT 2 07-FEB-24 7R2T 1 REMARK REVDAT 1 17-MAY-23 7R2T 0 JRNL AUTH K.CARRASCO,A.COUSIDO SIAH,G.GOGL,S.BETZI,A.MCEWEN, JRNL AUTH 2 C.KOSTMANN,G.TRAVE JRNL TITL SYNJ2BP PDZ DOMAIN IN COMPLEX WITH A SYNTHETIC VANGL2 JRNL TITL 2 PEPTIDE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 19064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8000 - 4.7809 1.00 2746 146 0.1943 0.2159 REMARK 3 2 4.7809 - 3.7952 0.99 2631 139 0.1960 0.2053 REMARK 3 3 3.7952 - 3.3156 0.99 2585 136 0.2174 0.2319 REMARK 3 4 3.3156 - 3.0126 0.99 2560 135 0.2410 0.2857 REMARK 3 5 3.0126 - 2.7967 0.99 2559 135 0.2640 0.3020 REMARK 3 6 2.7967 - 2.6318 0.98 2512 132 0.2814 0.3541 REMARK 3 7 2.6318 - 2.5000 0.98 2516 132 0.3220 0.3652 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 202 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9079 24.9172 7.7946 REMARK 3 T TENSOR REMARK 3 T11: 1.3206 T22: 0.9057 REMARK 3 T33: 0.8923 T12: -0.1324 REMARK 3 T13: 0.2161 T23: -0.0865 REMARK 3 L TENSOR REMARK 3 L11: 4.6464 L22: 4.3123 REMARK 3 L33: 3.1091 L12: -4.4099 REMARK 3 L13: -3.6893 L23: 3.3282 REMARK 3 S TENSOR REMARK 3 S11: -0.9019 S12: -0.4717 S13: -1.2155 REMARK 3 S21: 0.9243 S22: 0.2319 S23: 0.5842 REMARK 3 S31: 0.5835 S32: -0.4311 S33: 1.0927 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7038 29.6303 -2.7322 REMARK 3 T TENSOR REMARK 3 T11: 0.8466 T22: 0.9394 REMARK 3 T33: 0.5945 T12: -0.0807 REMARK 3 T13: 0.0780 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 0.4650 L22: 3.3342 REMARK 3 L33: 3.7373 L12: 1.4458 REMARK 3 L13: 1.5261 L23: 3.4237 REMARK 3 S TENSOR REMARK 3 S11: -0.1423 S12: 0.3073 S13: 0.0817 REMARK 3 S21: -0.7160 S22: -0.0140 S23: 0.2493 REMARK 3 S31: -0.7536 S32: 0.4031 S33: -0.0949 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 422 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1188 6.4199 -34.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.4636 T22: 0.5275 REMARK 3 T33: 0.5676 T12: 0.1015 REMARK 3 T13: -0.0004 T23: -0.0602 REMARK 3 L TENSOR REMARK 3 L11: 1.5049 L22: 2.2252 REMARK 3 L33: 2.8015 L12: -0.3654 REMARK 3 L13: 0.2714 L23: -1.5994 REMARK 3 S TENSOR REMARK 3 S11: 0.1162 S12: 0.0548 S13: -0.0582 REMARK 3 S21: -0.3608 S22: -0.2697 S23: -0.4528 REMARK 3 S31: 0.3884 S32: 0.7923 S33: 0.0370 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292120830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19104 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.888 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 12.94 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 12.14 REMARK 200 R MERGE FOR SHELL (I) : 1.32200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2JIK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 FORMATE, 0.1 M HEPES 7.0, 25 % V/V PEG SMEAR BROAD, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.65500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.69000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.65500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.69000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 MET A 5 REMARK 465 ASP A 6 REMARK 465 MET B 198 REMARK 465 ARG B 199 REMARK 465 LEU B 200 REMARK 465 GLN B 201 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 8 CG CD1 CD2 REMARK 470 ASN A 38 CG OD1 ND2 REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLN A 60 CG CD OE1 NE2 REMARK 470 LEU A 66 CG CD1 CD2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 LEU A 100 CG CD1 CD2 REMARK 470 ASN A 115 CG OD1 ND2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 PHE A 156 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 LYS A 171 CD CE NZ REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 LYS A 289 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA ILE A 243 NH1 ARG A 251 1.88 REMARK 500 OG SER A 67 O HOH A 601 2.02 REMARK 500 O HOH A 607 O HOH A 609 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LEU A 174 NH1 ARG A 261 3544 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 62.85 -109.89 REMARK 500 ASN A 50 44.00 74.78 REMARK 500 ARG A 58 -68.02 23.28 REMARK 500 GLU A 61 92.82 -46.45 REMARK 500 LYS A 130 48.18 -78.67 REMARK 500 VAL A 134 136.35 51.02 REMARK 500 LYS A 163 -19.56 68.14 REMARK 500 LEU A 204 -37.82 74.72 REMARK 500 THR A 206 133.94 68.77 REMARK 500 ASP A 265 103.74 -55.06 REMARK 500 ASP A 265 99.16 -55.57 REMARK 500 VAL A 381 -69.46 -110.00 REMARK 500 ASP A 382 21.94 -144.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 133 O REMARK 620 2 GLU A 136 OE2 62.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 285 O REMARK 620 2 ARG A 288 O 63.6 REMARK 620 3 GLY A 290 O 81.3 75.1 REMARK 620 4 GLU A 330 OE1 71.9 128.6 74.0 REMARK 620 5 GLU A 330 OE2 77.7 133.9 124.4 50.6 REMARK 620 6 HOH A 612 O 102.0 90.4 162.0 123.9 73.3 REMARK 620 7 HOH A 622 O 165.6 128.3 108.5 100.1 88.0 72.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 317 OG REMARK 620 2 MET A 361 O 68.8 REMARK 620 3 GLY A 363 O 67.6 3.8 REMARK 620 4 GLY A 365 O 65.1 3.8 3.8 REMARK 620 5 ASP A 405 OD1 68.2 2.4 5.9 4.2 REMARK 620 6 ASP A 405 OD2 70.9 3.1 6.8 6.5 2.8 REMARK 620 7 HOH A 613 O 68.8 0.3 3.5 3.7 2.8 3.4 REMARK 620 N 1 2 3 4 5 6 DBREF 7R2T A 6 103 UNP P57105 SYJ2B_HUMAN 6 103 DBREF1 7R2T A 105 422 UNP A0A4W2GEM6_BOBOX DBREF2 7R2T A A0A4W2GEM6 71 388 DBREF 7R2T B 198 206 PDB 7R2T 7R2T 198 206 SEQADV 7R2T GLN A 1 UNP P57105 EXPRESSION TAG SEQADV 7R2T GLY A 2 UNP P57105 EXPRESSION TAG SEQADV 7R2T SER A 3 UNP P57105 EXPRESSION TAG SEQADV 7R2T HIS A 4 UNP P57105 EXPRESSION TAG SEQADV 7R2T MET A 5 UNP P57105 EXPRESSION TAG SEQADV 7R2T GLY A 104 UNP P57105 LINKER SEQADV 7R2T ILE A 243 UNP A0A4W2GEM VAL 209 CONFLICT SEQADV 7R2T PRO A 306 UNP A0A4W2GEM CYS 272 CONFLICT SEQADV 7R2T ASP A 313 UNP A0A4W2GEM GLU 279 CONFLICT SEQADV 7R2T ARG A 328 UNP A0A4W2GEM LYS 294 CONFLICT SEQADV 7R2T ARG A 392 UNP A0A4W2GEM LYS 358 CONFLICT SEQRES 1 A 422 GLN GLY SER HIS MET ASP TYR LEU VAL THR GLU GLU GLU SEQRES 2 A 422 ILE ASN LEU THR ARG GLY PRO SER GLY LEU GLY PHE ASN SEQRES 3 A 422 ILE VAL GLY GLY THR ASP GLN GLN TYR VAL SER ASN ASP SEQRES 4 A 422 SER GLY ILE TYR VAL SER ARG ILE LYS GLU ASN GLY ALA SEQRES 5 A 422 ALA ALA LEU ASP GLY ARG LEU GLN GLU GLY ASP LYS ILE SEQRES 6 A 422 LEU SER VAL ASN GLY GLN ASP LEU LYS ASN LEU LEU HIS SEQRES 7 A 422 GLN ASP ALA VAL ASP LEU PHE ARG ASN ALA GLY TYR ALA SEQRES 8 A 422 VAL SER LEU ARG VAL GLN HIS ARG LEU GLN VAL GLN GLY SEQRES 9 A 422 SER ALA TYR GLY SER VAL LYS ALA TYR THR ASN PHE ASP SEQRES 10 A 422 ALA GLU ARG ASP ALA LEU ASN ILE GLU THR ALA ILE LYS SEQRES 11 A 422 THR LYS GLY VAL ASP GLU VAL THR ILE VAL ASN ILE LEU SEQRES 12 A 422 THR ASN ARG SER ASN GLU GLN ARG GLN ASP ILE ALA PHE SEQRES 13 A 422 ALA TYR GLN ARG ARG THR LYS LYS GLU LEU ALA SER ALA SEQRES 14 A 422 LEU LYS SER ALA LEU SER GLY HIS LEU GLU THR VAL ILE SEQRES 15 A 422 LEU GLY LEU LEU LYS THR PRO ALA GLN TYR ASP ALA SER SEQRES 16 A 422 GLU LEU LYS ALA SER MET LYS GLY LEU GLY THR ASP GLU SEQRES 17 A 422 ASP SER LEU ILE GLU ILE ILE CYS SER ARG THR ASN GLN SEQRES 18 A 422 GLU LEU GLN GLU ILE ASN ARG VAL TYR LYS GLU MET TYR SEQRES 19 A 422 LYS THR ASP LEU GLU LYS ASP ILE ILE SER ASP THR SER SEQRES 20 A 422 GLY ASP PHE ARG LYS LEU MET VAL ALA LEU ALA LYS GLY SEQRES 21 A 422 ARG ARG ALA GLU ASP GLY SER VAL ILE ASP TYR GLU LEU SEQRES 22 A 422 ILE ASP GLN ASP ALA ARG ASP LEU TYR ASP ALA GLY VAL SEQRES 23 A 422 LYS ARG LYS GLY THR ASP VAL PRO LYS TRP ILE SER ILE SEQRES 24 A 422 MET THR GLU ARG SER VAL PRO HIS LEU GLN LYS VAL PHE SEQRES 25 A 422 ASP ARG TYR LYS SER TYR SER PRO TYR ASP MET LEU GLU SEQRES 26 A 422 SER ILE ARG LYS GLU VAL LYS GLY ASP LEU GLU ASN ALA SEQRES 27 A 422 PHE LEU ASN LEU VAL GLN CYS ILE GLN ASN LYS PRO LEU SEQRES 28 A 422 TYR PHE ALA ASP ARG LEU TYR ASP SER MET LYS GLY LYS SEQRES 29 A 422 GLY THR ARG ASP LYS VAL LEU ILE ARG ILE MET VAL SER SEQRES 30 A 422 ARG SER GLU VAL ASP MET LEU LYS ILE ARG SER GLU PHE SEQRES 31 A 422 LYS ARG LYS TYR GLY LYS SER LEU TYR TYR TYR ILE GLN SEQRES 32 A 422 GLN ASP THR LYS GLY ASP TYR GLN LYS ALA LEU LEU TYR SEQRES 33 A 422 LEU CYS GLY GLY ASP ASP SEQRES 1 B 9 MET ARG LEU GLN SER GLU THR SEP VAL HET SEP B 205 10 HET CA A 501 1 HET CA A 502 1 HET CA A 503 1 HET GOL A 504 6 HET GOL A 505 6 HET CA A 506 1 HET CA A 507 1 HETNAM SEP PHOSPHOSERINE HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN SEP PHOSPHONOSERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SEP C3 H8 N O6 P FORMUL 3 CA 5(CA 2+) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 10 HOH *23(H2 O) HELIX 1 AA1 GLY A 51 GLY A 57 1 7 HELIX 2 AA2 LEU A 77 ASN A 87 1 11 HELIX 3 AA3 ASP A 117 LYS A 130 1 14 HELIX 4 AA4 ASP A 135 THR A 144 1 10 HELIX 5 AA5 SER A 147 LYS A 163 1 17 HELIX 6 AA6 GLU A 165 LEU A 174 1 10 HELIX 7 AA7 SER A 175 LYS A 187 1 13 HELIX 8 AA8 THR A 188 LYS A 202 1 15 HELIX 9 AA9 ASP A 207 ARG A 218 1 12 HELIX 10 AB1 THR A 219 LYS A 235 1 17 HELIX 11 AB2 ASP A 237 THR A 246 1 10 HELIX 12 AB3 SER A 247 LYS A 259 1 13 HELIX 13 AB4 ASP A 270 GLY A 285 1 16 HELIX 14 AB5 ASP A 292 ARG A 303 1 12 HELIX 15 AB6 SER A 304 SER A 319 1 16 HELIX 16 AB7 ASP A 322 LYS A 329 1 8 HELIX 17 AB8 LYS A 332 GLY A 363 1 32 HELIX 18 AB9 ARG A 367 SER A 379 1 13 HELIX 19 AC1 ASP A 382 GLY A 395 1 14 HELIX 20 AC2 SER A 397 THR A 406 1 10 HELIX 21 AC3 LYS A 407 GLY A 419 1 13 SHEET 1 AA1 4 LEU A 8 THR A 17 0 SHEET 2 AA1 4 ALA A 91 LEU A 100 -1 O LEU A 100 N LEU A 8 SHEET 3 AA1 4 LYS A 64 VAL A 68 -1 N LEU A 66 O ARG A 95 SHEET 4 AA1 4 GLN A 71 ASP A 72 -1 O GLN A 71 N VAL A 68 SHEET 1 AA2 6 LEU A 8 THR A 17 0 SHEET 2 AA2 6 ALA A 91 LEU A 100 -1 O LEU A 100 N LEU A 8 SHEET 3 AA2 6 LYS A 64 VAL A 68 -1 N LEU A 66 O ARG A 95 SHEET 4 AA2 6 ILE A 42 ILE A 47 -1 N ILE A 42 O ILE A 65 SHEET 5 AA2 6 PHE A 25 GLY A 29 -1 N ASN A 26 O SER A 45 SHEET 6 AA2 6 THR B 204 VAL B 206 -1 O VAL B 206 N PHE A 25 LINK C THR B 204 N SEP B 205 1555 1555 1.32 LINK C SEP B 205 N VAL B 206 1555 1555 1.32 LINK O GLY A 133 CA CA A 501 1555 1555 2.87 LINK OE2 GLU A 136 CA CA A 501 1555 1555 2.78 LINK O GLY A 285 CA CA A 502 1555 1555 2.74 LINK O ARG A 288 CA CA A 502 1555 1555 2.31 LINK O GLY A 290 CA CA A 502 1555 1555 2.41 LINK OG SER A 317 CA CA A 503 1555 3454 2.31 LINK OE1 GLU A 330 CA CA A 502 1555 1555 2.72 LINK OE2 GLU A 330 CA CA A 502 1555 1555 2.35 LINK O MET A 361 CA CA A 503 1555 1555 2.30 LINK O GLY A 363 CA CA A 503 1555 1555 2.27 LINK O GLY A 365 CA CA A 503 1555 1555 2.48 LINK OD1 ASP A 405 CA CA A 503 1555 1555 2.17 LINK OD2 ASP A 405 CA CA A 503 1555 1555 3.06 LINK CA CA A 502 O HOH A 612 1555 1555 2.33 LINK CA CA A 502 O HOH A 622 1555 1555 2.47 LINK CA CA A 503 O HOH A 613 1555 3444 2.32 LINK CA CA A 506 O HOH A 609 1555 1555 2.72 CRYST1 60.100 61.380 145.310 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016639 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006882 0.00000