HEADER PROTEIN TRANSPORT 07-FEB-22 7R3M TITLE STRUCTURE IN SOLUTION OF THE TANGO1 CARGO-BINDING DOMAIN (21-131) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORT AND GOLGI ORGANIZATION PROTEIN 1 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TANGO1,C219-REACTIVE PEPTIDE,D320,MELANOMA INHIBITORY COMPND 5 ACTIVITY PROTEIN 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MIA3, KIAA0268, TANGO, UNQ6077/PRO20088; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ER, TANGO1, MIA3, MOTH DOMAIN, PROTEIN TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR O.ARNOLDS,R.STOLL REVDAT 3 03-MAY-23 7R3M 1 JRNL REVDAT 2 26-APR-23 7R3M 1 JRNL REVDAT 1 22-FEB-23 7R3M 0 JRNL AUTH O.ARNOLDS,R.STOLL JRNL TITL CHARACTERIZATION OF A FOLD IN TANGO1 EVOLVED FROM SH3 JRNL TITL 2 DOMAINS FOR THE EXPORT OF BULKY CARGOS. JRNL REF NAT COMMUN V. 14 2273 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37080980 JRNL DOI 10.1038/S41467-023-37705-4 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, ARIA REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. (CNS), LINGE, O'DONOGHUE AND REMARK 3 NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292120780. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 195 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 TANGO1(21-131), 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D CBCA(CO)NH; 3D HNCACB; REMARK 210 3D H(CCO)NH; 3D 1H-15N NOESY; 2D REMARK 210 1H-13C HSQC; 3D HCCH-COSY; 3D REMARK 210 HCCH-TOCSY; 3D 1H-13C NOESY; 4D REMARK 210 13C-1H-13C HSQCNOESYHSQC; 3D REMARK 210 HN(CA)CO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : DRX600; AVANCE III HD REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 6000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 21 48.95 -87.26 REMARK 500 1 PHE A 32 -93.28 35.86 REMARK 500 1 MET A 47 -61.17 -98.08 REMARK 500 1 CYS A 61 -44.67 79.68 REMARK 500 1 ARG A 80 91.69 63.00 REMARK 500 1 HIS A 106 158.18 178.76 REMARK 500 1 ASP A 126 91.15 48.56 REMARK 500 2 PRO A 21 40.50 -91.66 REMARK 500 2 PHE A 32 108.94 -58.83 REMARK 500 2 SER A 33 167.69 67.88 REMARK 500 2 CYS A 61 -51.10 77.50 REMARK 500 2 ARG A 80 133.28 70.61 REMARK 500 2 ASP A 130 30.83 -88.82 REMARK 500 3 LEU A 24 97.15 65.16 REMARK 500 3 PHE A 32 -55.05 -134.97 REMARK 500 3 CYS A 61 -38.45 78.12 REMARK 500 3 ARG A 80 92.83 60.30 REMARK 500 4 THR A 28 71.63 -100.92 REMARK 500 4 ARG A 31 -144.64 -92.20 REMARK 500 4 PHE A 32 94.57 -63.77 REMARK 500 4 SER A 33 163.50 66.48 REMARK 500 4 CYS A 61 -34.17 133.54 REMARK 500 4 ARG A 80 79.05 58.16 REMARK 500 4 HIS A 106 147.37 -171.61 REMARK 500 4 ASP A 126 97.64 -179.16 REMARK 500 5 GLN A 23 75.61 55.99 REMARK 500 5 ARG A 30 -153.86 -95.22 REMARK 500 5 SER A 33 156.50 70.06 REMARK 500 5 MET A 47 -65.53 -92.09 REMARK 500 5 CYS A 61 -42.83 73.30 REMARK 500 5 ARG A 80 79.77 59.62 REMARK 500 5 HIS A 106 157.81 178.54 REMARK 500 6 ARG A 30 -159.13 -107.97 REMARK 500 6 SER A 33 -153.71 59.39 REMARK 500 6 MET A 47 -64.14 -94.71 REMARK 500 6 ASP A 60 21.51 -74.56 REMARK 500 6 CYS A 61 -34.91 84.58 REMARK 500 6 HIS A 106 123.88 173.57 REMARK 500 6 PHE A 122 30.32 -145.80 REMARK 500 7 THR A 28 71.95 -104.43 REMARK 500 7 SER A 33 178.46 61.21 REMARK 500 7 CYS A 61 -44.92 82.82 REMARK 500 7 ARG A 80 89.70 61.21 REMARK 500 8 MET A 47 -60.07 -97.22 REMARK 500 8 ASP A 60 21.29 -75.35 REMARK 500 8 CYS A 61 -44.29 86.06 REMARK 500 8 ALA A 79 84.54 -66.78 REMARK 500 8 ARG A 80 82.21 59.12 REMARK 500 8 HIS A 106 123.53 176.30 REMARK 500 9 PHE A 32 -161.75 -64.83 REMARK 500 REMARK 500 THIS ENTRY HAS 110 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34708 RELATED DB: BMRB REMARK 900 STRUCTURE IN SOLUTION OF THE TANGO1 CARGO-BINDING DOMAIN (21-131) DBREF 7R3M A 21 131 UNP Q5JRA6 TGO1_HUMAN 21 131 SEQADV 7R3M MET A 20 UNP Q5JRA6 INITIATING METHIONINE SEQRES 1 A 112 MET PRO GLY GLN LEU ASP PRO SER THR GLY ARG ARG PHE SEQRES 2 A 112 SER GLU HIS LYS LEU CYS ALA ASP ASP GLU CYS SER MET SEQRES 3 A 112 LEU MET TYR ARG GLY GLU ALA LEU GLU ASP PHE THR GLY SEQRES 4 A 112 PRO ASP CYS ARG PHE VAL ASN PHE LYS LYS GLY ASP PRO SEQRES 5 A 112 VAL TYR VAL TYR TYR LYS LEU ALA ARG GLY TRP PRO GLU SEQRES 6 A 112 VAL TRP ALA GLY SER VAL GLY ARG THR PHE GLY TYR PHE SEQRES 7 A 112 PRO LYS ASP LEU ILE GLN VAL VAL HIS GLU TYR THR LYS SEQRES 8 A 112 GLU GLU LEU GLN VAL PRO THR ASP GLU THR ASP PHE VAL SEQRES 9 A 112 CYS PHE ASP GLY GLY ARG ASP ASP SHEET 1 AA1 5 THR A 93 PRO A 98 0 SHEET 2 AA1 5 VAL A 85 VAL A 90 -1 N VAL A 90 O THR A 93 SHEET 3 AA1 5 ASP A 70 LEU A 78 -1 N TYR A 76 O ALA A 87 SHEET 4 AA1 5 TYR A 48 ALA A 52 -1 N GLY A 50 O VAL A 72 SHEET 5 AA1 5 ILE A 102 GLU A 107 -1 O HIS A 106 N ARG A 49 SHEET 1 AA2 5 THR A 93 PRO A 98 0 SHEET 2 AA2 5 VAL A 85 VAL A 90 -1 N VAL A 90 O THR A 93 SHEET 3 AA2 5 ASP A 70 LEU A 78 -1 N TYR A 76 O ALA A 87 SHEET 4 AA2 5 HIS A 35 CYS A 38 -1 N LEU A 37 O LYS A 77 SHEET 5 AA2 5 LEU A 113 PRO A 116 -1 O VAL A 115 N LYS A 36 SSBOND 1 CYS A 38 CYS A 43 1555 1555 2.03 SSBOND 2 CYS A 61 CYS A 124 1555 1555 2.03 CISPEP 1 TRP A 82 PRO A 83 1 2.65 CISPEP 2 TRP A 82 PRO A 83 2 -0.99 CISPEP 3 TRP A 82 PRO A 83 3 -0.05 CISPEP 4 TRP A 82 PRO A 83 4 -1.35 CISPEP 5 TRP A 82 PRO A 83 5 2.14 CISPEP 6 TRP A 82 PRO A 83 6 0.89 CISPEP 7 TRP A 82 PRO A 83 7 0.36 CISPEP 8 TRP A 82 PRO A 83 8 -0.58 CISPEP 9 TRP A 82 PRO A 83 9 2.64 CISPEP 10 TRP A 82 PRO A 83 10 1.88 CISPEP 11 TRP A 82 PRO A 83 11 -2.48 CISPEP 12 TRP A 82 PRO A 83 12 0.87 CISPEP 13 TRP A 82 PRO A 83 13 -1.68 CISPEP 14 TRP A 82 PRO A 83 14 0.41 CISPEP 15 TRP A 82 PRO A 83 15 3.32 CISPEP 16 TRP A 82 PRO A 83 16 1.26 CISPEP 17 TRP A 82 PRO A 83 17 0.08 CISPEP 18 TRP A 82 PRO A 83 18 1.30 CISPEP 19 TRP A 82 PRO A 83 19 -0.55 CISPEP 20 TRP A 82 PRO A 83 20 -2.34 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1