HEADER IMMUNE SYSTEM 10-FEB-22 7R53 TITLE CRYSTAL STRUCTURE OF HUMAN TLR8 IN COMPLEX WITH COMPOUND 15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR8, UNQ249/PRO286; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227 KEYWDS TOLL-LIKE RECEPTOR, TLR8, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.FALLER,F.ZINK REVDAT 3 31-JAN-24 7R53 1 REMARK REVDAT 2 04-MAY-22 7R53 1 JRNL REVDAT 1 23-MAR-22 7R53 0 JRNL AUTH C.BETSCHART,M.FALLER,F.ZINK,R.HEMMIG,J.BLANK, JRNL AUTH 2 E.VANGREVELINGHE,M.BOURREL,R.GLATTHAR,D.BEHNKE,K.BARKER, JRNL AUTH 3 A.HEIZMANN,D.ANGST,P.NIMSGERN,S.JACQUIER,T.JUNT,G.ZIPFEL, JRNL AUTH 4 G.RUZZANTE,P.LOETSCHER,S.LIMONTA,S.HAWTIN,C.B.ANDRE, JRNL AUTH 5 T.BOULAY,R.FEIFEL,T.KNOEPFEL JRNL TITL STRUCTURE-BASED OPTIMIZATION OF A FRAGMENT-LIKE TLR8 BINDING JRNL TITL 2 SCREENING HIT TO AN IN VIVO EFFICACIOUS TLR7/8 ANTAGONIST. JRNL REF ACS MED.CHEM.LETT. V. 13 658 2022 JRNL REFN ISSN 1948-5875 JRNL PMID 35450354 JRNL DOI 10.1021/ACSMEDCHEMLETT.1C00696 REMARK 2 REMARK 2 RESOLUTION. 3.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.8 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 32648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1552 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.12 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.09 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3196 REMARK 3 BIN FREE R VALUE : 0.4057 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 26 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11587 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 546 REMARK 3 SOLVENT ATOMS : 139 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 101.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.53340 REMARK 3 B22 (A**2) : -24.78110 REMARK 3 B33 (A**2) : 38.31450 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.59240 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.460 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.504 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.888 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 12422 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 16959 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4376 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 2075 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 12422 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1778 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8791 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 0.73 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.95 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.68 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 14.8687 -2.2462 37.6911 REMARK 3 T TENSOR REMARK 3 T11: -0.2347 T22: 0.0206 REMARK 3 T33: -0.1698 T12: 0.1181 REMARK 3 T13: -0.0213 T23: 0.0451 REMARK 3 L TENSOR REMARK 3 L11: 1.4187 L22: 0.9845 REMARK 3 L33: 2.5929 L12: 0.3878 REMARK 3 L13: -0.3225 L23: -0.1942 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: 0.0313 S13: -0.4451 REMARK 3 S21: 0.0313 S22: 0.072 S23: -0.542 REMARK 3 S31: -0.4451 S32: -0.542 S33: -0.1188 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 50.9728 -23.4762 25.2357 REMARK 3 T TENSOR REMARK 3 T11: -0.0486 T22: -0.2095 REMARK 3 T33: -0.0691 T12: 0.1191 REMARK 3 T13: 0.0125 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.5259 L22: 0.9317 REMARK 3 L33: 2.2189 L12: 0.256 REMARK 3 L13: -0.14 L23: -0.1891 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: -0.0929 S13: 0.4302 REMARK 3 S21: -0.0929 S22: -0.0652 S23: 0.3782 REMARK 3 S31: 0.4302 S32: 0.3782 S33: 0.1121 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R53 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292120410. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32656 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.120 REMARK 200 RESOLUTION RANGE LOW (A) : 68.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3W3G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%(W/V) PEG3350, 0.2M CALCIUM REMARK 280 CHLORIDE DIHYDRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.44100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.53250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.44100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.53250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 PHE A 30 REMARK 465 GLN A 101 REMARK 465 HIS A 102 REMARK 465 GLN A 103 REMARK 465 ASN A 104 REMARK 465 GLY A 105 REMARK 465 ASN A 106 REMARK 465 PRO A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 GLN A 110 REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 CYS A 181 REMARK 465 TYR A 182 REMARK 465 PHE A 183 REMARK 465 ASN A 184 REMARK 465 LYS A 185 REMARK 465 VAL A 186 REMARK 465 CYS A 187 REMARK 465 VAL A 434 REMARK 465 LYS A 435 REMARK 465 ASP A 436 REMARK 465 THR A 437 REMARK 465 ARG A 438 REMARK 465 GLN A 439 REMARK 465 SER A 440 REMARK 465 TYR A 441 REMARK 465 ALA A 442 REMARK 465 ASN A 443 REMARK 465 SER A 444 REMARK 465 SER A 445 REMARK 465 SER A 446 REMARK 465 PHE A 447 REMARK 465 GLN A 448 REMARK 465 ARG A 449 REMARK 465 HIS A 450 REMARK 465 ILE A 451 REMARK 465 ARG A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 ARG A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 ASP A 458 REMARK 465 PHE A 459 REMARK 465 GLU A 460 REMARK 465 PHE A 461 REMARK 465 ASP A 601 REMARK 465 LYS A 602 REMARK 465 TYR A 603 REMARK 465 ASN A 604 REMARK 465 LEU A 819 REMARK 465 THR A 820 REMARK 465 THR A 821 REMARK 465 CYS A 822 REMARK 465 VAL A 823 REMARK 465 SER A 824 REMARK 465 ASP A 825 REMARK 465 VAL A 826 REMARK 465 THR A 827 REMARK 465 GLU A 828 REMARK 465 PHE A 829 REMARK 465 LEU A 830 REMARK 465 VAL A 831 REMARK 465 PRO A 832 REMARK 465 ARG A 833 REMARK 465 GLU B 27 REMARK 465 GLU B 28 REMARK 465 ASN B 29 REMARK 465 PHE B 30 REMARK 465 GLN B 101 REMARK 465 HIS B 102 REMARK 465 GLN B 103 REMARK 465 ASN B 104 REMARK 465 GLY B 105 REMARK 465 ASN B 106 REMARK 465 PRO B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 GLN B 110 REMARK 465 SER B 111 REMARK 465 ASN B 112 REMARK 465 CYS B 181 REMARK 465 TYR B 182 REMARK 465 PHE B 183 REMARK 465 ASN B 184 REMARK 465 LYS B 185 REMARK 465 VAL B 186 REMARK 465 CYS B 187 REMARK 465 GLU B 188 REMARK 465 VAL B 434 REMARK 465 LYS B 435 REMARK 465 ASP B 436 REMARK 465 THR B 437 REMARK 465 ARG B 438 REMARK 465 GLN B 439 REMARK 465 SER B 440 REMARK 465 TYR B 441 REMARK 465 ALA B 442 REMARK 465 ASN B 443 REMARK 465 SER B 444 REMARK 465 SER B 445 REMARK 465 SER B 446 REMARK 465 PHE B 447 REMARK 465 GLN B 448 REMARK 465 ARG B 449 REMARK 465 HIS B 450 REMARK 465 ILE B 451 REMARK 465 ARG B 452 REMARK 465 LYS B 453 REMARK 465 ARG B 454 REMARK 465 ARG B 455 REMARK 465 SER B 456 REMARK 465 THR B 457 REMARK 465 ASP B 458 REMARK 465 PHE B 459 REMARK 465 GLU B 460 REMARK 465 PHE B 461 REMARK 465 ASP B 626 REMARK 465 ASP B 627 REMARK 465 ASP B 628 REMARK 465 ASN B 629 REMARK 465 LEU B 819 REMARK 465 THR B 820 REMARK 465 THR B 821 REMARK 465 CYS B 822 REMARK 465 VAL B 823 REMARK 465 SER B 824 REMARK 465 ASP B 825 REMARK 465 VAL B 826 REMARK 465 THR B 827 REMARK 465 GLU B 828 REMARK 465 PHE B 829 REMARK 465 LEU B 830 REMARK 465 VAL B 831 REMARK 465 PRO B 832 REMARK 465 ARG B 833 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 31 OG REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 55 CG CD OE1 NE2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 VAL A 100 CG1 CG2 REMARK 470 ASN A 123 CG OD1 ND2 REMARK 470 GLN A 136 CG CD OE1 NE2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 LEU A 245 CG CD1 CD2 REMARK 470 ILE A 246 CG1 CG2 CD1 REMARK 470 LYS A 350 CG CD CE NZ REMARK 470 LYS A 365 CG CD CE NZ REMARK 470 ASP A 385 CG OD1 OD2 REMARK 470 GLN A 392 CG CD OE1 NE2 REMARK 470 LYS A 412 CG CD CE NZ REMARK 470 ARG A 429 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 433 CG CD1 CD2 REMARK 470 PHE A 467 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 472 CG CD NE CZ NH1 NH2 REMARK 470 SER A 565 OG REMARK 470 ILE A 570 CG1 CG2 CD1 REMARK 470 VAL A 573 CG1 CG2 REMARK 470 THR A 574 OG1 CG2 REMARK 470 GLU A 578 CG CD OE1 OE2 REMARK 470 GLN A 581 CG CD OE1 NE2 REMARK 470 ASP A 626 CG OD1 OD2 REMARK 470 ASP A 627 CG OD1 OD2 REMARK 470 LYS A 652 CG CD CE NZ REMARK 470 LYS A 677 CG CD CE NZ REMARK 470 PHE A 678 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 715 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 732 CG CD1 CD2 REMARK 470 LYS A 739 CG CD CE NZ REMARK 470 SER B 31 OG REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 ARG B 52 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 VAL B 100 CG1 CG2 REMARK 470 ASN B 123 CG OD1 ND2 REMARK 470 GLN B 136 CG CD OE1 NE2 REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 GLU B 193 CG CD OE1 OE2 REMARK 470 LEU B 245 CG CD1 CD2 REMARK 470 LYS B 350 CG CD CE NZ REMARK 470 LYS B 365 CG CD CE NZ REMARK 470 LEU B 433 CG CD1 CD2 REMARK 470 PHE B 467 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 472 CG CD NE CZ NH1 NH2 REMARK 470 SER B 565 OG REMARK 470 ILE B 570 CG1 CG2 CD1 REMARK 470 VAL B 573 CG1 CG2 REMARK 470 THR B 574 OG1 CG2 REMARK 470 GLU B 578 CG CD OE1 OE2 REMARK 470 GLN B 581 CG CD OE1 NE2 REMARK 470 ASP B 601 CG OD1 OD2 REMARK 470 LYS B 602 CG CD CE NZ REMARK 470 ASN B 604 CG OD1 ND2 REMARK 470 ASN B 625 CG OD1 ND2 REMARK 470 LYS B 652 CG CD CE NZ REMARK 470 PHE B 678 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 715 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 732 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 99 97.92 -63.04 REMARK 500 ASN A 157 41.35 -104.30 REMARK 500 ASP A 194 95.88 -69.23 REMARK 500 SER A 214 -29.74 73.22 REMARK 500 CYS A 257 67.60 72.21 REMARK 500 CYS A 270 30.41 -78.85 REMARK 500 ASP A 271 103.97 51.95 REMARK 500 LEU A 286 58.43 -107.86 REMARK 500 TYR A 322 63.57 -119.53 REMARK 500 LEU A 374 50.21 -117.93 REMARK 500 VAL A 378 98.41 69.60 REMARK 500 GLU A 421 -30.04 -134.38 REMARK 500 SER A 492 32.60 -97.48 REMARK 500 PRO A 505 -177.80 -65.16 REMARK 500 LEU A 550 -3.25 64.44 REMARK 500 VAL A 573 -59.94 -133.35 REMARK 500 LEU A 577 30.72 -93.61 REMARK 500 ARG A 619 68.38 -116.21 REMARK 500 TRP A 624 76.92 -101.25 REMARK 500 SER A 633 55.24 -102.87 REMARK 500 ASN A 661 30.16 -87.70 REMARK 500 ASN A 674 -155.47 -128.53 REMARK 500 ASN A 698 -169.66 -117.73 REMARK 500 SER A 713 -21.26 -156.84 REMARK 500 LEU A 714 100.97 -55.50 REMARK 500 GLU A 734 -70.48 -59.73 REMARK 500 ASN A 746 -162.82 -103.79 REMARK 500 HIS A 790 76.78 -104.53 REMARK 500 SER A 816 35.73 -96.97 REMARK 500 ASN B 99 98.01 -63.13 REMARK 500 ASN B 157 41.34 -104.21 REMARK 500 ASP B 194 95.70 -69.09 REMARK 500 SER B 214 -29.53 73.28 REMARK 500 CYS B 257 67.65 72.16 REMARK 500 CYS B 270 30.83 -78.62 REMARK 500 ASP B 271 103.82 52.19 REMARK 500 LEU B 286 58.75 -108.05 REMARK 500 TYR B 322 63.56 -119.48 REMARK 500 LEU B 374 50.26 -117.95 REMARK 500 VAL B 378 98.21 69.60 REMARK 500 ALA B 514 51.54 37.34 REMARK 500 ALA B 518 40.08 -106.00 REMARK 500 LEU B 550 -3.53 64.87 REMARK 500 VAL B 573 -59.79 -133.40 REMARK 500 LEU B 577 30.68 -93.36 REMARK 500 ASP B 601 -85.18 49.51 REMARK 500 ARG B 619 73.07 -115.60 REMARK 500 SER B 633 55.22 -102.83 REMARK 500 ASN B 674 -158.27 -129.86 REMARK 500 ASN B 698 -169.62 -117.77 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1075 DISTANCE = 6.50 ANGSTROMS DBREF 7R53 A 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 DBREF 7R53 B 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 SEQADV 7R53 GLU A 828 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 PHE A 829 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 LEU A 830 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 VAL A 831 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 PRO A 832 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 ARG A 833 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 GLU B 828 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 PHE B 829 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 LEU B 830 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 VAL B 831 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 PRO B 832 UNP Q9NR97 EXPRESSION TAG SEQADV 7R53 ARG B 833 UNP Q9NR97 EXPRESSION TAG SEQRES 1 A 807 GLU GLU ASN PHE SER ARG SER TYR PRO CYS ASP GLU LYS SEQRES 2 A 807 LYS GLN ASN ASP SER VAL ILE ALA GLU CYS SER ASN ARG SEQRES 3 A 807 ARG LEU GLN GLU VAL PRO GLN THR VAL GLY LYS TYR VAL SEQRES 4 A 807 THR GLU LEU ASP LEU SER ASP ASN PHE ILE THR HIS ILE SEQRES 5 A 807 THR ASN GLU SER PHE GLN GLY LEU GLN ASN LEU THR LYS SEQRES 6 A 807 ILE ASN LEU ASN HIS ASN PRO ASN VAL GLN HIS GLN ASN SEQRES 7 A 807 GLY ASN PRO GLY ILE GLN SER ASN GLY LEU ASN ILE THR SEQRES 8 A 807 ASP GLY ALA PHE LEU ASN LEU LYS ASN LEU ARG GLU LEU SEQRES 9 A 807 LEU LEU GLU ASP ASN GLN LEU PRO GLN ILE PRO SER GLY SEQRES 10 A 807 LEU PRO GLU SER LEU THR GLU LEU SER LEU ILE GLN ASN SEQRES 11 A 807 ASN ILE TYR ASN ILE THR LYS GLU GLY ILE SER ARG LEU SEQRES 12 A 807 ILE ASN LEU LYS ASN LEU TYR LEU ALA TRP ASN CYS TYR SEQRES 13 A 807 PHE ASN LYS VAL CYS GLU LYS THR ASN ILE GLU ASP GLY SEQRES 14 A 807 VAL PHE GLU THR LEU THR ASN LEU GLU LEU LEU SER LEU SEQRES 15 A 807 SER PHE ASN SER LEU SER HIS VAL PRO PRO LYS LEU PRO SEQRES 16 A 807 SER SER LEU ARG LYS LEU PHE LEU SER ASN THR GLN ILE SEQRES 17 A 807 LYS TYR ILE SER GLU GLU ASP PHE LYS GLY LEU ILE ASN SEQRES 18 A 807 LEU THR LEU LEU ASP LEU SER GLY ASN CYS PRO ARG CYS SEQRES 19 A 807 PHE ASN ALA PRO PHE PRO CYS VAL PRO CYS ASP GLY GLY SEQRES 20 A 807 ALA SER ILE ASN ILE ASP ARG PHE ALA PHE GLN ASN LEU SEQRES 21 A 807 THR GLN LEU ARG TYR LEU ASN LEU SER SER THR SER LEU SEQRES 22 A 807 ARG LYS ILE ASN ALA ALA TRP PHE LYS ASN MET PRO HIS SEQRES 23 A 807 LEU LYS VAL LEU ASP LEU GLU PHE ASN TYR LEU VAL GLY SEQRES 24 A 807 GLU ILE ALA SER GLY ALA PHE LEU THR MET LEU PRO ARG SEQRES 25 A 807 LEU GLU ILE LEU ASP LEU SER PHE ASN TYR ILE LYS GLY SEQRES 26 A 807 SER TYR PRO GLN HIS ILE ASN ILE SER ARG ASN PHE SER SEQRES 27 A 807 LYS LEU LEU SER LEU ARG ALA LEU HIS LEU ARG GLY TYR SEQRES 28 A 807 VAL PHE GLN GLU LEU ARG GLU ASP ASP PHE GLN PRO LEU SEQRES 29 A 807 MET GLN LEU PRO ASN LEU SER THR ILE ASN LEU GLY ILE SEQRES 30 A 807 ASN PHE ILE LYS GLN ILE ASP PHE LYS LEU PHE GLN ASN SEQRES 31 A 807 PHE SER ASN LEU GLU ILE ILE TYR LEU SER GLU ASN ARG SEQRES 32 A 807 ILE SER PRO LEU VAL LYS ASP THR ARG GLN SER TYR ALA SEQRES 33 A 807 ASN SER SER SER PHE GLN ARG HIS ILE ARG LYS ARG ARG SEQRES 34 A 807 SER THR ASP PHE GLU PHE ASP PRO HIS SER ASN PHE TYR SEQRES 35 A 807 HIS PHE THR ARG PRO LEU ILE LYS PRO GLN CYS ALA ALA SEQRES 36 A 807 TYR GLY LYS ALA LEU ASP LEU SER LEU ASN SER ILE PHE SEQRES 37 A 807 PHE ILE GLY PRO ASN GLN PHE GLU ASN LEU PRO ASP ILE SEQRES 38 A 807 ALA CYS LEU ASN LEU SER ALA ASN SER ASN ALA GLN VAL SEQRES 39 A 807 LEU SER GLY THR GLU PHE SER ALA ILE PRO HIS VAL LYS SEQRES 40 A 807 TYR LEU ASP LEU THR ASN ASN ARG LEU ASP PHE ASP ASN SEQRES 41 A 807 ALA SER ALA LEU THR GLU LEU SER ASP LEU GLU VAL LEU SEQRES 42 A 807 ASP LEU SER TYR ASN SER HIS TYR PHE ARG ILE ALA GLY SEQRES 43 A 807 VAL THR HIS HIS LEU GLU PHE ILE GLN ASN PHE THR ASN SEQRES 44 A 807 LEU LYS VAL LEU ASN LEU SER HIS ASN ASN ILE TYR THR SEQRES 45 A 807 LEU THR ASP LYS TYR ASN LEU GLU SER LYS SER LEU VAL SEQRES 46 A 807 GLU LEU VAL PHE SER GLY ASN ARG LEU ASP ILE LEU TRP SEQRES 47 A 807 ASN ASP ASP ASP ASN ARG TYR ILE SER ILE PHE LYS GLY SEQRES 48 A 807 LEU LYS ASN LEU THR ARG LEU ASP LEU SER LEU ASN ARG SEQRES 49 A 807 LEU LYS HIS ILE PRO ASN GLU ALA PHE LEU ASN LEU PRO SEQRES 50 A 807 ALA SER LEU THR GLU LEU HIS ILE ASN ASP ASN MET LEU SEQRES 51 A 807 LYS PHE PHE ASN TRP THR LEU LEU GLN GLN PHE PRO ARG SEQRES 52 A 807 LEU GLU LEU LEU ASP LEU ARG GLY ASN LYS LEU LEU PHE SEQRES 53 A 807 LEU THR ASP SER LEU SER ASP PHE THR SER SER LEU ARG SEQRES 54 A 807 THR LEU LEU LEU SER HIS ASN ARG ILE SER HIS LEU PRO SEQRES 55 A 807 SER GLY PHE LEU SER GLU VAL SER SER LEU LYS HIS LEU SEQRES 56 A 807 ASP LEU SER SER ASN LEU LEU LYS THR ILE ASN LYS SER SEQRES 57 A 807 ALA LEU GLU THR LYS THR THR THR LYS LEU SER MET LEU SEQRES 58 A 807 GLU LEU HIS GLY ASN PRO PHE GLU CYS THR CYS ASP ILE SEQRES 59 A 807 GLY ASP PHE ARG ARG TRP MET ASP GLU HIS LEU ASN VAL SEQRES 60 A 807 LYS ILE PRO ARG LEU VAL ASP VAL ILE CYS ALA SER PRO SEQRES 61 A 807 GLY ASP GLN ARG GLY LYS SER ILE VAL SER LEU GLU LEU SEQRES 62 A 807 THR THR CYS VAL SER ASP VAL THR GLU PHE LEU VAL PRO SEQRES 63 A 807 ARG SEQRES 1 B 807 GLU GLU ASN PHE SER ARG SER TYR PRO CYS ASP GLU LYS SEQRES 2 B 807 LYS GLN ASN ASP SER VAL ILE ALA GLU CYS SER ASN ARG SEQRES 3 B 807 ARG LEU GLN GLU VAL PRO GLN THR VAL GLY LYS TYR VAL SEQRES 4 B 807 THR GLU LEU ASP LEU SER ASP ASN PHE ILE THR HIS ILE SEQRES 5 B 807 THR ASN GLU SER PHE GLN GLY LEU GLN ASN LEU THR LYS SEQRES 6 B 807 ILE ASN LEU ASN HIS ASN PRO ASN VAL GLN HIS GLN ASN SEQRES 7 B 807 GLY ASN PRO GLY ILE GLN SER ASN GLY LEU ASN ILE THR SEQRES 8 B 807 ASP GLY ALA PHE LEU ASN LEU LYS ASN LEU ARG GLU LEU SEQRES 9 B 807 LEU LEU GLU ASP ASN GLN LEU PRO GLN ILE PRO SER GLY SEQRES 10 B 807 LEU PRO GLU SER LEU THR GLU LEU SER LEU ILE GLN ASN SEQRES 11 B 807 ASN ILE TYR ASN ILE THR LYS GLU GLY ILE SER ARG LEU SEQRES 12 B 807 ILE ASN LEU LYS ASN LEU TYR LEU ALA TRP ASN CYS TYR SEQRES 13 B 807 PHE ASN LYS VAL CYS GLU LYS THR ASN ILE GLU ASP GLY SEQRES 14 B 807 VAL PHE GLU THR LEU THR ASN LEU GLU LEU LEU SER LEU SEQRES 15 B 807 SER PHE ASN SER LEU SER HIS VAL PRO PRO LYS LEU PRO SEQRES 16 B 807 SER SER LEU ARG LYS LEU PHE LEU SER ASN THR GLN ILE SEQRES 17 B 807 LYS TYR ILE SER GLU GLU ASP PHE LYS GLY LEU ILE ASN SEQRES 18 B 807 LEU THR LEU LEU ASP LEU SER GLY ASN CYS PRO ARG CYS SEQRES 19 B 807 PHE ASN ALA PRO PHE PRO CYS VAL PRO CYS ASP GLY GLY SEQRES 20 B 807 ALA SER ILE ASN ILE ASP ARG PHE ALA PHE GLN ASN LEU SEQRES 21 B 807 THR GLN LEU ARG TYR LEU ASN LEU SER SER THR SER LEU SEQRES 22 B 807 ARG LYS ILE ASN ALA ALA TRP PHE LYS ASN MET PRO HIS SEQRES 23 B 807 LEU LYS VAL LEU ASP LEU GLU PHE ASN TYR LEU VAL GLY SEQRES 24 B 807 GLU ILE ALA SER GLY ALA PHE LEU THR MET LEU PRO ARG SEQRES 25 B 807 LEU GLU ILE LEU ASP LEU SER PHE ASN TYR ILE LYS GLY SEQRES 26 B 807 SER TYR PRO GLN HIS ILE ASN ILE SER ARG ASN PHE SER SEQRES 27 B 807 LYS LEU LEU SER LEU ARG ALA LEU HIS LEU ARG GLY TYR SEQRES 28 B 807 VAL PHE GLN GLU LEU ARG GLU ASP ASP PHE GLN PRO LEU SEQRES 29 B 807 MET GLN LEU PRO ASN LEU SER THR ILE ASN LEU GLY ILE SEQRES 30 B 807 ASN PHE ILE LYS GLN ILE ASP PHE LYS LEU PHE GLN ASN SEQRES 31 B 807 PHE SER ASN LEU GLU ILE ILE TYR LEU SER GLU ASN ARG SEQRES 32 B 807 ILE SER PRO LEU VAL LYS ASP THR ARG GLN SER TYR ALA SEQRES 33 B 807 ASN SER SER SER PHE GLN ARG HIS ILE ARG LYS ARG ARG SEQRES 34 B 807 SER THR ASP PHE GLU PHE ASP PRO HIS SER ASN PHE TYR SEQRES 35 B 807 HIS PHE THR ARG PRO LEU ILE LYS PRO GLN CYS ALA ALA SEQRES 36 B 807 TYR GLY LYS ALA LEU ASP LEU SER LEU ASN SER ILE PHE SEQRES 37 B 807 PHE ILE GLY PRO ASN GLN PHE GLU ASN LEU PRO ASP ILE SEQRES 38 B 807 ALA CYS LEU ASN LEU SER ALA ASN SER ASN ALA GLN VAL SEQRES 39 B 807 LEU SER GLY THR GLU PHE SER ALA ILE PRO HIS VAL LYS SEQRES 40 B 807 TYR LEU ASP LEU THR ASN ASN ARG LEU ASP PHE ASP ASN SEQRES 41 B 807 ALA SER ALA LEU THR GLU LEU SER ASP LEU GLU VAL LEU SEQRES 42 B 807 ASP LEU SER TYR ASN SER HIS TYR PHE ARG ILE ALA GLY SEQRES 43 B 807 VAL THR HIS HIS LEU GLU PHE ILE GLN ASN PHE THR ASN SEQRES 44 B 807 LEU LYS VAL LEU ASN LEU SER HIS ASN ASN ILE TYR THR SEQRES 45 B 807 LEU THR ASP LYS TYR ASN LEU GLU SER LYS SER LEU VAL SEQRES 46 B 807 GLU LEU VAL PHE SER GLY ASN ARG LEU ASP ILE LEU TRP SEQRES 47 B 807 ASN ASP ASP ASP ASN ARG TYR ILE SER ILE PHE LYS GLY SEQRES 48 B 807 LEU LYS ASN LEU THR ARG LEU ASP LEU SER LEU ASN ARG SEQRES 49 B 807 LEU LYS HIS ILE PRO ASN GLU ALA PHE LEU ASN LEU PRO SEQRES 50 B 807 ALA SER LEU THR GLU LEU HIS ILE ASN ASP ASN MET LEU SEQRES 51 B 807 LYS PHE PHE ASN TRP THR LEU LEU GLN GLN PHE PRO ARG SEQRES 52 B 807 LEU GLU LEU LEU ASP LEU ARG GLY ASN LYS LEU LEU PHE SEQRES 53 B 807 LEU THR ASP SER LEU SER ASP PHE THR SER SER LEU ARG SEQRES 54 B 807 THR LEU LEU LEU SER HIS ASN ARG ILE SER HIS LEU PRO SEQRES 55 B 807 SER GLY PHE LEU SER GLU VAL SER SER LEU LYS HIS LEU SEQRES 56 B 807 ASP LEU SER SER ASN LEU LEU LYS THR ILE ASN LYS SER SEQRES 57 B 807 ALA LEU GLU THR LYS THR THR THR LYS LEU SER MET LEU SEQRES 58 B 807 GLU LEU HIS GLY ASN PRO PHE GLU CYS THR CYS ASP ILE SEQRES 59 B 807 GLY ASP PHE ARG ARG TRP MET ASP GLU HIS LEU ASN VAL SEQRES 60 B 807 LYS ILE PRO ARG LEU VAL ASP VAL ILE CYS ALA SER PRO SEQRES 61 B 807 GLY ASP GLN ARG GLY LYS SER ILE VAL SER LEU GLU LEU SEQRES 62 B 807 THR THR CYS VAL SER ASP VAL THR GLU PHE LEU VAL PRO SEQRES 63 B 807 ARG HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET NAG A 901 14 HET NAG A 902 14 HET NAG A 903 14 HET NAG A 904 14 HET NAG A 905 14 HET NAG A 906 14 HET I5N A 907 28 HET I5N A 908 28 HET NAG B 901 14 HET NAG B 902 14 HET NAG B 903 14 HET NAG B 904 14 HET NAG B 905 14 HET NAG B 906 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM I5N 5-CYCLOPROPYL-6-(2,6-DIMETHYLPYRIDIN-4-YL)-~{N}- HETNAM 2 I5N [(3~{R},4~{R})-3-FLUORANYLPIPERIDIN-4-YL]-1~{H}- HETNAM 3 I5N INDAZOL-3-AMINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 24(C8 H15 N O6) FORMUL 3 BMA 6(C6 H12 O6) FORMUL 3 MAN 8(C6 H12 O6) FORMUL 15 I5N 2(C22 H26 F N5) FORMUL 23 HOH *139(H2 O) HELIX 1 AA1 VAL A 196 LEU A 200 5 5 HELIX 2 AA2 SER A 238 PHE A 242 5 5 HELIX 3 AA3 ASN A 303 LYS A 308 5 6 HELIX 4 AA4 LEU A 323 GLY A 330 1 8 HELIX 5 AA5 ALA A 331 LEU A 336 5 6 HELIX 6 AA6 SER A 360 LEU A 366 5 7 HELIX 7 AA7 ARG A 383 MET A 391 5 9 HELIX 8 AA8 PHE A 411 ASN A 416 5 6 HELIX 9 AA9 LYS A 476 ALA A 481 1 6 HELIX 10 AB1 LEU A 577 PHE A 583 5 7 HELIX 11 AB2 ARG A 619 TRP A 624 1 6 HELIX 12 AB3 PRO A 655 ASN A 661 1 7 HELIX 13 AB4 ASN A 680 PHE A 687 5 8 HELIX 14 AB5 SER A 706 PHE A 710 5 5 HELIX 15 AB6 GLY A 730 VAL A 735 1 6 HELIX 16 AB7 THR A 777 ASP A 779 5 3 HELIX 17 AB8 ILE A 780 HIS A 790 1 11 HELIX 18 AB9 ARG A 797 VAL A 801 5 5 HELIX 19 AC1 SER A 813 LEU A 817 5 5 HELIX 20 AC2 VAL B 196 LEU B 200 5 5 HELIX 21 AC3 SER B 238 PHE B 242 5 5 HELIX 22 AC4 ASN B 303 LYS B 308 5 6 HELIX 23 AC5 LEU B 323 GLY B 330 1 8 HELIX 24 AC6 ALA B 331 LEU B 336 5 6 HELIX 25 AC7 SER B 360 LEU B 366 5 7 HELIX 26 AC8 GLU B 384 MET B 391 5 8 HELIX 27 AC9 PHE B 411 PHE B 417 5 7 HELIX 28 AD1 LYS B 476 ALA B 481 1 6 HELIX 29 AD2 LEU B 577 PHE B 583 5 7 HELIX 30 AD3 ARG B 619 TRP B 624 1 6 HELIX 31 AD4 PRO B 655 ASN B 661 1 7 HELIX 32 AD5 ASN B 680 PHE B 687 5 8 HELIX 33 AD6 SER B 706 PHE B 710 5 5 HELIX 34 AD7 GLY B 730 VAL B 735 1 6 HELIX 35 AD8 THR B 777 ASP B 779 5 3 HELIX 36 AD9 ILE B 780 HIS B 790 1 11 HELIX 37 AE1 ARG B 797 VAL B 801 5 5 HELIX 38 AE2 SER B 813 LEU B 817 5 5 SHEET 1 AA128 ASP A 37 LYS A 40 0 SHEET 2 AA128 VAL A 45 GLU A 48 -1 O ILE A 46 N LYS A 39 SHEET 3 AA128 GLU A 67 ASP A 69 1 O GLU A 67 N ALA A 47 SHEET 4 AA128 LYS A 91 ASN A 93 1 O LYS A 91 N LEU A 68 SHEET 5 AA128 GLU A 129 LEU A 131 1 O GLU A 129 N ILE A 92 SHEET 6 AA128 GLU A 150 SER A 152 1 O GLU A 150 N LEU A 130 SHEET 7 AA128 ASN A 174 TYR A 176 1 O TYR A 176 N LEU A 151 SHEET 8 AA128 LEU A 205 SER A 207 1 O LEU A 205 N LEU A 175 SHEET 9 AA128 LYS A 226 PHE A 228 1 O PHE A 228 N LEU A 206 SHEET 10 AA128 LEU A 250 ASP A 252 1 O LEU A 250 N LEU A 227 SHEET 11 AA128 TYR A 291 ASN A 293 1 O TYR A 291 N LEU A 251 SHEET 12 AA128 VAL A 315 ASP A 317 1 O VAL A 315 N LEU A 292 SHEET 13 AA128 ILE A 341 ASP A 343 1 O ILE A 341 N LEU A 316 SHEET 14 AA128 ALA A 371 HIS A 373 1 O ALA A 371 N LEU A 342 SHEET 15 AA128 THR A 398 ASN A 400 1 O ASN A 400 N LEU A 372 SHEET 16 AA128 ILE A 422 TYR A 424 1 O ILE A 422 N ILE A 399 SHEET 17 AA128 LYS A 484 ASP A 487 1 O ASP A 487 N ILE A 423 SHEET 18 AA128 ILE A 507 ASN A 511 1 O CYS A 509 N LEU A 486 SHEET 19 AA128 TYR A 534 ASP A 536 1 O ASP A 536 N LEU A 510 SHEET 20 AA128 VAL A 558 ASP A 560 1 O VAL A 558 N LEU A 535 SHEET 21 AA128 VAL A 588 ASN A 590 1 O VAL A 588 N LEU A 559 SHEET 22 AA128 GLU A 612 VAL A 614 1 O VAL A 614 N LEU A 589 SHEET 23 AA128 ARG A 643 ASP A 645 1 O ARG A 643 N LEU A 613 SHEET 24 AA128 GLU A 668 HIS A 670 1 O HIS A 670 N LEU A 644 SHEET 25 AA128 LEU A 692 ASP A 694 1 O LEU A 692 N LEU A 669 SHEET 26 AA128 THR A 716 LEU A 718 1 O LEU A 718 N LEU A 693 SHEET 27 AA128 HIS A 740 ASP A 742 1 O HIS A 740 N LEU A 717 SHEET 28 AA128 MET A 766 GLU A 768 1 O MET A 766 N LEU A 741 SHEET 1 AA2 2 HIS A 77 ILE A 78 0 SHEET 2 AA2 2 ASN A 115 ILE A 116 1 O ASN A 115 N ILE A 78 SHEET 1 AA3 2 ASN A 160 ILE A 161 0 SHEET 2 AA3 2 ASN A 191 ILE A 192 1 O ASN A 191 N ILE A 161 SHEET 1 AA4 2 TYR A 236 ILE A 237 0 SHEET 2 AA4 2 ASN A 277 ILE A 278 1 O ASN A 277 N ILE A 237 SHEET 1 AA5 2 GLU A 381 LEU A 382 0 SHEET 2 AA5 2 GLN A 408 ILE A 409 1 O GLN A 408 N LEU A 382 SHEET 1 AA628 ASP B 37 LYS B 40 0 SHEET 2 AA628 VAL B 45 GLU B 48 -1 O ILE B 46 N LYS B 39 SHEET 3 AA628 GLU B 67 ASP B 69 1 O GLU B 67 N ALA B 47 SHEET 4 AA628 LYS B 91 ASN B 93 1 O LYS B 91 N LEU B 68 SHEET 5 AA628 GLU B 129 LEU B 131 1 O GLU B 129 N ILE B 92 SHEET 6 AA628 GLU B 150 SER B 152 1 O GLU B 150 N LEU B 130 SHEET 7 AA628 ASN B 174 TYR B 176 1 O TYR B 176 N LEU B 151 SHEET 8 AA628 LEU B 205 SER B 207 1 O LEU B 205 N LEU B 175 SHEET 9 AA628 LYS B 226 PHE B 228 1 O PHE B 228 N LEU B 206 SHEET 10 AA628 LEU B 250 ASP B 252 1 O LEU B 250 N LEU B 227 SHEET 11 AA628 TYR B 291 ASN B 293 1 O TYR B 291 N LEU B 251 SHEET 12 AA628 VAL B 315 ASP B 317 1 O VAL B 315 N LEU B 292 SHEET 13 AA628 ILE B 341 ASP B 343 1 O ILE B 341 N LEU B 316 SHEET 14 AA628 ALA B 371 HIS B 373 1 O ALA B 371 N LEU B 342 SHEET 15 AA628 THR B 398 ASN B 400 1 O ASN B 400 N LEU B 372 SHEET 16 AA628 ILE B 422 TYR B 424 1 O ILE B 422 N ILE B 399 SHEET 17 AA628 LYS B 484 ASP B 487 1 O ALA B 485 N ILE B 423 SHEET 18 AA628 ILE B 507 ASN B 511 1 O ASN B 511 N LEU B 486 SHEET 19 AA628 TYR B 534 ASP B 536 1 O ASP B 536 N LEU B 510 SHEET 20 AA628 VAL B 558 ASP B 560 1 O VAL B 558 N LEU B 535 SHEET 21 AA628 VAL B 588 ASN B 590 1 O VAL B 588 N LEU B 559 SHEET 22 AA628 GLU B 612 VAL B 614 1 O VAL B 614 N LEU B 589 SHEET 23 AA628 ARG B 643 ASP B 645 1 O ARG B 643 N LEU B 613 SHEET 24 AA628 GLU B 668 HIS B 670 1 O HIS B 670 N LEU B 644 SHEET 25 AA628 LEU B 692 ASP B 694 1 O LEU B 692 N LEU B 669 SHEET 26 AA628 THR B 716 LEU B 718 1 O LEU B 718 N LEU B 693 SHEET 27 AA628 HIS B 740 ASP B 742 1 O HIS B 740 N LEU B 717 SHEET 28 AA628 MET B 766 GLU B 768 1 O MET B 766 N LEU B 741 SHEET 1 AA7 2 HIS B 77 ILE B 78 0 SHEET 2 AA7 2 ASN B 115 ILE B 116 1 O ASN B 115 N ILE B 78 SHEET 1 AA8 2 ASN B 160 ILE B 161 0 SHEET 2 AA8 2 ASN B 191 ILE B 192 1 O ASN B 191 N ILE B 161 SHEET 1 AA9 2 TYR B 236 ILE B 237 0 SHEET 2 AA9 2 ASN B 277 ILE B 278 1 O ASN B 277 N ILE B 237 SHEET 1 AB1 2 GLU B 381 LEU B 382 0 SHEET 2 AB1 2 GLN B 408 ILE B 409 1 O GLN B 408 N LEU B 382 SSBOND 1 CYS A 36 CYS A 49 1555 1555 2.04 SSBOND 2 CYS A 257 CYS A 270 1555 1555 2.03 SSBOND 3 CYS A 260 CYS A 267 1555 1555 2.04 SSBOND 4 CYS A 479 CYS A 509 1555 1555 2.03 SSBOND 5 CYS A 776 CYS A 803 1555 1555 2.03 SSBOND 6 CYS B 36 CYS B 49 1555 1555 2.03 SSBOND 7 CYS B 257 CYS B 270 1555 1555 2.03 SSBOND 8 CYS B 260 CYS B 267 1555 1555 2.04 SSBOND 9 CYS B 479 CYS B 509 1555 1555 2.03 SSBOND 10 CYS B 776 CYS B 803 1555 1555 2.03 LINK ND2 ASN A 88 C1 NAG A 906 1555 1555 1.43 LINK ND2 ASN A 293 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 395 C1 NAG A 903 1555 1555 1.43 LINK ND2 ASN A 416 C1 NAG A 904 1555 1555 1.43 LINK ND2 ASN A 511 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 546 C1 NAG A 901 1555 1555 1.43 LINK ND2 ASN A 590 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 640 C1 NAG A 905 1555 1555 1.43 LINK ND2 ASN A 680 C1 NAG A 902 1555 1555 1.43 LINK ND2 ASN B 88 C1 NAG B 906 1555 1555 1.43 LINK ND2 ASN B 293 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG B 903 1555 1555 1.43 LINK ND2 ASN B 416 C1 NAG B 904 1555 1555 1.43 LINK ND2 ASN B 511 C1 NAG G 1 1555 1555 1.43 LINK ND2 ASN B 546 C1 NAG B 901 1555 1555 1.43 LINK ND2 ASN B 590 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN B 640 C1 NAG B 905 1555 1555 1.43 LINK ND2 ASN B 680 C1 NAG B 902 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.41 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.42 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.41 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.41 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.42 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.41 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.41 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.43 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.41 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.41 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.42 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.43 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.41 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.42 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.42 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.41 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.41 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.43 LINK O6 BMA H 3 C1 MAN H 5 1555 1555 1.40 CISPEP 1 TYR A 34 PRO A 35 0 -0.48 CISPEP 2 ASN A 97 PRO A 98 0 0.65 CISPEP 3 THR A 574 HIS A 575 0 -0.83 CISPEP 4 SER A 805 PRO A 806 0 0.00 CISPEP 5 TYR B 34 PRO B 35 0 -0.23 CISPEP 6 ASN B 97 PRO B 98 0 0.79 CISPEP 7 THR B 574 HIS B 575 0 -0.96 CISPEP 8 SER B 805 PRO B 806 0 -0.22 CRYST1 164.882 89.065 152.273 90.00 120.26 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006065 0.000000 0.003538 0.00000 SCALE2 0.000000 0.011228 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007603 0.00000